Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTTCTGAAGAAAGCAAACTTGCAGAAACCTTCTCTTCCGTCCCAAATGGTGTGGGACCCCATTGCCAGAAGGCAAAGAAGGAGATGTTACCAACCGGCGAAGCTCCGATATGTGGTGACGGCGGCTGCGAGCGGCTGGAGCAGGCTCTCCGAGAGTGCCACAAGCGACTTCCAGAAGGCCCGGCCCGGCGGTCGGCTTGCCGACACCTGAACCGAGCTCTTGCAGAGTGTCTGGTGGCGACGGCTTGCCCTAGCGAGGCGGAGGCGGTGCGATCCCTCTGCTCCAGCGGCGGAACCGCTCTCAAGAGATCGCAGTGCGAGCAAGCTAAGTTTTCGCTCTCTTTCTGTCTCTCATCTCTCCAATTTTGA
mRNA sequence
ATGTCTTCTGAAGAAAGCAAACTTGCAGAAACCTTCTCTTCCGTCCCAAATGGTGTGGGACCCCATTGCCAGAAGGCAAAGAAGGAGATGTTACCAACCGGCGAAGCTCCGATATGTGGTGACGGCGGCTGCGAGCGGCTGGAGCAGGCTCTCCGAGAGTGCCACAAGCGACTTCCAGAAGGCCCGGCCCGGCGGTCGGCTTGCCGACACCTGAACCGAGCTCTTGCAGAGTGTCTGGTGGCGACGGCTTGCCCTAGCGAGGCGGAGGCGGTGCGATCCCTCTGCTCCAGCGGCGGAACCGCTCTCAAGAGATCGCAGTGCGAGCAAGCTAAGTTTTCGCTCTCTTTCTGTCTCTCATCTCTCCAATTTTGA
Coding sequence (CDS)
ATGTCTTCTGAAGAAAGCAAACTTGCAGAAACCTTCTCTTCCGTCCCAAATGGTGTGGGACCCCATTGCCAGAAGGCAAAGAAGGAGATGTTACCAACCGGCGAAGCTCCGATATGTGGTGACGGCGGCTGCGAGCGGCTGGAGCAGGCTCTCCGAGAGTGCCACAAGCGACTTCCAGAAGGCCCGGCCCGGCGGTCGGCTTGCCGACACCTGAACCGAGCTCTTGCAGAGTGTCTGGTGGCGACGGCTTGCCCTAGCGAGGCGGAGGCGGTGCGATCCCTCTGCTCCAGCGGCGGAACCGCTCTCAAGAGATCGCAGTGCGAGCAAGCTAAGTTTTCGCTCTCTTTCTGTCTCTCATCTCTCCAATTTTGA
Protein sequence
MSSEESKLAETFSSVPNGVGPHCQKAKKEMLPTGEAPICGDGGCERLEQALRECHKRLPEGPARRSACRHLNRALAECLVATACPSEAEAVRSLCSSGGTALKRSQCEQAKFSLSFCLSSLQF
Homology
BLAST of ClCG01G009440 vs. NCBI nr
Match:
XP_038893663.1 (uncharacterized protein LOC120082530 [Benincasa hispida])
HSP 1 Score: 188.3 bits (477), Expect = 3.8e-44
Identity = 93/97 (95.88%), Postives = 95/97 (97.94%), Query Frame = 0
Query: 27 KKEMLPTGEAPICGDGGCERLEQALRECHKRLPEGPARRSACRHLNRALAECLVATACPS 86
KKEMLPTG A ICGDGGCERLEQALRECHKRLPEGPARRSACRHLNR+LAECLVATACPS
Sbjct: 3 KKEMLPTGGASICGDGGCERLEQALRECHKRLPEGPARRSACRHLNRSLAECLVATACPS 62
Query: 87 EAEAVRSLCSSGGTALKRSQCEQAKFSLSFCLSSLQF 124
EAEAVR+LCSSGGTALKRSQCEQAKFSLSFCLSSLQF
Sbjct: 63 EAEAVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQF 99
BLAST of ClCG01G009440 vs. NCBI nr
Match:
XP_008459043.1 (PREDICTED: uncharacterized protein LOC103498267 [Cucumis melo] >KAA0043206.1 uncharacterized protein E6C27_scaffold110G00780 [Cucumis melo var. makuwa] >TYK12262.1 uncharacterized protein E5676_scaffold302G00190 [Cucumis melo var. makuwa])
HSP 1 Score: 178.3 bits (451), Expect = 4.0e-41
Identity = 86/94 (91.49%), Postives = 91/94 (96.81%), Query Frame = 0
Query: 30 MLPTGEAPICGDGGCERLEQALRECHKRLPEGPARRSACRHLNRALAECLVATACPSEAE 89
MLP GE+P+CGD GCERLEQALRECHKR+PEGPARRSACRHLNR+LAECLVATACPSE E
Sbjct: 1 MLPIGESPMCGDDGCERLEQALRECHKRVPEGPARRSACRHLNRSLAECLVATACPSEVE 60
Query: 90 AVRSLCSSGGTALKRSQCEQAKFSLSFCLSSLQF 124
AVR+LCSSGGTALKRSQCEQAKFSLSFCLSSLQF
Sbjct: 61 AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQF 94
BLAST of ClCG01G009440 vs. NCBI nr
Match:
XP_004145445.1 (uncharacterized protein LOC101219184 [Cucumis sativus])
HSP 1 Score: 177.2 bits (448), Expect = 8.8e-41
Identity = 86/94 (91.49%), Postives = 92/94 (97.87%), Query Frame = 0
Query: 30 MLPTGEAPICGDGGCERLEQALRECHKRLPEGPARRSACRHLNRALAECLVATACPSEAE 89
MLP GE+P+ GDGGC+RLEQALRECHKR+PEGPARRSACRHLNR+LAECLVATACPSEAE
Sbjct: 1 MLPMGESPLGGDGGCDRLEQALRECHKRVPEGPARRSACRHLNRSLAECLVATACPSEAE 60
Query: 90 AVRSLCSSGGTALKRSQCEQAKFSLSFCLSSLQF 124
AVR+LCSSGGTALKRSQCEQAKFSLSFCLSSLQF
Sbjct: 61 AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQF 94
BLAST of ClCG01G009440 vs. NCBI nr
Match:
XP_023542217.1 (uncharacterized protein LOC111802182 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 165.2 bits (417), Expect = 3.5e-37
Identity = 80/93 (86.02%), Postives = 86/93 (92.47%), Query Frame = 0
Query: 30 MLPTGEAPICGDGGCERLEQALRECHKRLPEGPARRSACRHLNRALAECLVATACPSEAE 89
M+PTG+API GDGGCERLEQALR+CHKRLPEGPARRS C HLNR+ AECLVAT CP+EAE
Sbjct: 1 MVPTGKAPIGGDGGCERLEQALRDCHKRLPEGPARRSGCGHLNRSFAECLVATVCPNEAE 60
Query: 90 AVRSLCSSGGTALKRSQCEQAKFSLSFCLSSLQ 123
AVR+LCSSGGTALKRSQCEQAKFS S CLSSLQ
Sbjct: 61 AVRTLCSSGGTALKRSQCEQAKFSFSLCLSSLQ 93
BLAST of ClCG01G009440 vs. NCBI nr
Match:
XP_022994930.1 (uncharacterized protein LOC111490507 [Cucurbita maxima])
HSP 1 Score: 164.9 bits (416), Expect = 4.5e-37
Identity = 80/93 (86.02%), Postives = 86/93 (92.47%), Query Frame = 0
Query: 30 MLPTGEAPICGDGGCERLEQALRECHKRLPEGPARRSACRHLNRALAECLVATACPSEAE 89
M+PTG+API GDGGCERLEQALR+CHKRLPEGPARRS C HLNR+ AECLVAT CP+EAE
Sbjct: 1 MVPTGKAPIGGDGGCERLEQALRDCHKRLPEGPARRSGCWHLNRSFAECLVATVCPNEAE 60
Query: 90 AVRSLCSSGGTALKRSQCEQAKFSLSFCLSSLQ 123
AVR+LCSSGGTALKRSQCEQAKFS S CLSSLQ
Sbjct: 61 AVRTLCSSGGTALKRSQCEQAKFSFSLCLSSLQ 93
BLAST of ClCG01G009440 vs. ExPASy TrEMBL
Match:
A0A5D3CLT3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G00190 PE=4 SV=1)
HSP 1 Score: 178.3 bits (451), Expect = 1.9e-41
Identity = 86/94 (91.49%), Postives = 91/94 (96.81%), Query Frame = 0
Query: 30 MLPTGEAPICGDGGCERLEQALRECHKRLPEGPARRSACRHLNRALAECLVATACPSEAE 89
MLP GE+P+CGD GCERLEQALRECHKR+PEGPARRSACRHLNR+LAECLVATACPSE E
Sbjct: 1 MLPIGESPMCGDDGCERLEQALRECHKRVPEGPARRSACRHLNRSLAECLVATACPSEVE 60
Query: 90 AVRSLCSSGGTALKRSQCEQAKFSLSFCLSSLQF 124
AVR+LCSSGGTALKRSQCEQAKFSLSFCLSSLQF
Sbjct: 61 AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQF 94
BLAST of ClCG01G009440 vs. ExPASy TrEMBL
Match:
A0A1S3C8S8 (uncharacterized protein LOC103498267 OS=Cucumis melo OX=3656 GN=LOC103498267 PE=4 SV=1)
HSP 1 Score: 178.3 bits (451), Expect = 1.9e-41
Identity = 86/94 (91.49%), Postives = 91/94 (96.81%), Query Frame = 0
Query: 30 MLPTGEAPICGDGGCERLEQALRECHKRLPEGPARRSACRHLNRALAECLVATACPSEAE 89
MLP GE+P+CGD GCERLEQALRECHKR+PEGPARRSACRHLNR+LAECLVATACPSE E
Sbjct: 1 MLPIGESPMCGDDGCERLEQALRECHKRVPEGPARRSACRHLNRSLAECLVATACPSEVE 60
Query: 90 AVRSLCSSGGTALKRSQCEQAKFSLSFCLSSLQF 124
AVR+LCSSGGTALKRSQCEQAKFSLSFCLSSLQF
Sbjct: 61 AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQF 94
BLAST of ClCG01G009440 vs. ExPASy TrEMBL
Match:
A0A0A0LYC1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G702000 PE=4 SV=1)
HSP 1 Score: 177.2 bits (448), Expect = 4.3e-41
Identity = 86/94 (91.49%), Postives = 92/94 (97.87%), Query Frame = 0
Query: 30 MLPTGEAPICGDGGCERLEQALRECHKRLPEGPARRSACRHLNRALAECLVATACPSEAE 89
MLP GE+P+ GDGGC+RLEQALRECHKR+PEGPARRSACRHLNR+LAECLVATACPSEAE
Sbjct: 1 MLPMGESPLGGDGGCDRLEQALRECHKRVPEGPARRSACRHLNRSLAECLVATACPSEAE 60
Query: 90 AVRSLCSSGGTALKRSQCEQAKFSLSFCLSSLQF 124
AVR+LCSSGGTALKRSQCEQAKFSLSFCLSSLQF
Sbjct: 61 AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQF 94
BLAST of ClCG01G009440 vs. ExPASy TrEMBL
Match:
A0A6J1K2P5 (uncharacterized protein LOC111490507 OS=Cucurbita maxima OX=3661 GN=LOC111490507 PE=4 SV=1)
HSP 1 Score: 164.9 bits (416), Expect = 2.2e-37
Identity = 80/93 (86.02%), Postives = 86/93 (92.47%), Query Frame = 0
Query: 30 MLPTGEAPICGDGGCERLEQALRECHKRLPEGPARRSACRHLNRALAECLVATACPSEAE 89
M+PTG+API GDGGCERLEQALR+CHKRLPEGPARRS C HLNR+ AECLVAT CP+EAE
Sbjct: 1 MVPTGKAPIGGDGGCERLEQALRDCHKRLPEGPARRSGCWHLNRSFAECLVATVCPNEAE 60
Query: 90 AVRSLCSSGGTALKRSQCEQAKFSLSFCLSSLQ 123
AVR+LCSSGGTALKRSQCEQAKFS S CLSSLQ
Sbjct: 61 AVRTLCSSGGTALKRSQCEQAKFSFSLCLSSLQ 93
BLAST of ClCG01G009440 vs. ExPASy TrEMBL
Match:
A0A6J1CN74 (uncharacterized protein LOC111012670 OS=Momordica charantia OX=3673 GN=LOC111012670 PE=4 SV=1)
HSP 1 Score: 164.1 bits (414), Expect = 3.7e-37
Identity = 81/95 (85.26%), Postives = 90/95 (94.74%), Query Frame = 0
Query: 30 MLPTGEAPICGD--GGCERLEQALRECHKRLPEGPARRSACRHLNRALAECLVATACPSE 89
MLPTGEAPI G GGCERLEQALR+CH+R+P+GPARRSACRHLNR+LAECLVATACP+E
Sbjct: 14 MLPTGEAPISGGGVGGCERLEQALRDCHRRVPDGPARRSACRHLNRSLAECLVATACPNE 73
Query: 90 AEAVRSLCSSGGTALKRSQCEQAKFSLSFCLSSLQ 123
AEAVR+LCS+ GTALKRSQC+QAKFSLSFCLSSLQ
Sbjct: 74 AEAVRTLCSTAGTALKRSQCQQAKFSLSFCLSSLQ 108
BLAST of ClCG01G009440 vs. TAIR 10
Match:
AT1G31175.1 (unknown protein; Has 20 Blast hits to 20 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 122.9 bits (307), Expect = 1.8e-28
Identity = 58/79 (73.42%), Postives = 68/79 (86.08%), Query Frame = 0
Query: 44 CERLEQALRECHKRLPEGPARRSACRHLNRALAECLVATACPSEAEAVRSLCSSGGTALK 103
C+RLE+AL +CH+R+PEGPARRS CRHLN+A AEC+VA ACP E+EAVRSLCSSGGT+LK
Sbjct: 34 CDRLEEALLQCHRRMPEGPARRSGCRHLNKAFAECVVAEACPEESEAVRSLCSSGGTSLK 93
Query: 104 RSQCEQAKFSLSFCLSSLQ 123
R QCE A+ SLS CLS Q
Sbjct: 94 RKQCEYAQLSLSLCLSRHQ 112
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_038893663.1 | 3.8e-44 | 95.88 | uncharacterized protein LOC120082530 [Benincasa hispida] | [more] |
| XP_008459043.1 | 4.0e-41 | 91.49 | PREDICTED: uncharacterized protein LOC103498267 [Cucumis melo] >KAA0043206.1 unc... | [more] |
| XP_004145445.1 | 8.8e-41 | 91.49 | uncharacterized protein LOC101219184 [Cucumis sativus] | [more] |
| XP_023542217.1 | 3.5e-37 | 86.02 | uncharacterized protein LOC111802182 [Cucurbita pepo subsp. pepo] | [more] |
| XP_022994930.1 | 4.5e-37 | 86.02 | uncharacterized protein LOC111490507 [Cucurbita maxima] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3CLT3 | 1.9e-41 | 91.49 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A1S3C8S8 | 1.9e-41 | 91.49 | uncharacterized protein LOC103498267 OS=Cucumis melo OX=3656 GN=LOC103498267 PE=... | [more] |
| A0A0A0LYC1 | 4.3e-41 | 91.49 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G702000 PE=4 SV=1 | [more] |
| A0A6J1K2P5 | 2.2e-37 | 86.02 | uncharacterized protein LOC111490507 OS=Cucurbita maxima OX=3661 GN=LOC111490507... | [more] |
| A0A6J1CN74 | 3.7e-37 | 85.26 | uncharacterized protein LOC111012670 OS=Momordica charantia OX=3673 GN=LOC111012... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT1G31175.1 | 1.8e-28 | 73.42 | unknown protein; Has 20 Blast hits to 20 proteins in 10 species: Archae - 0; Bac... | [more] |
