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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGTCGTTCATCGGGTCACAAATCCATTGGATCTGGCATAATCTAAACTTTGGCGTCTACCAACTTGCTGATTGGACGGTTACTAACCACACTTGTCGTCTTGTGGTTTCGTCTCATTGTCTGTTCATTGCGTGGTCTTTTGGTTCGTCGCTTGATGTGTTGACCAAATGAAAGTATTGATTCACCGCTTTTCTTCATATTTTCTTTGATGTTTCTGATCTCTTCTTTAATCATAATCTTGCGTTGAAAACATTAAAACAAACAAACATTGTAATCTTTTGTACACTTGTGTTGGCATAGTACAATTTTCATATAAATTCATCACATTTCAATACTTTAAATCTCAATTTAGATTGGTTAACTTGTACTTTTACAAGTTATGATGTGGTGTCTAGTTTTTCTTGTGTAGTTCATAAGCAACTAGCATATCCGAACCGCTTAAAAGTCTGAACCGAAGAATAAACCGCGTCGTCGGCACAAAAGGGCTGAAAAACTTAGAATTTTTTTGGAAAAAATGGGACCAATTTAGACCGCTGGTGTAGAAAAAAAAGAAAAGAAAAAGAAAAAGAAAAGAAACCTTCTTCTACTGCCCTCCCGCCTCTTGGATTTTGGAGTTTCCATTCCAGTTACATTTTCTCTGCACCACATTTTCTTTCTTTGCTCAAGTATGTCTCTCTCTCTCTCCTAATCTCTTGTTTCTCTTCATTCTGTTTATTCTCTTTTAAATTCATTTTTCAAATATCTGTTTGGTTGCTGAGAAAACTGTGCTGGGAAACGTACAAGCATCGAGTGTTTTCGATTTCTCTAGTTCATTATTCAGCATTTTGTTTAGGAACTACTGGATTAGTTTGAATTAACTGTTTATTTGTTTAATACGTCGAACTCAAGGTATTTCTCAGACACCGGAAGTTGAAGAGAGGATTTTACTGCCAGTGGTAT mRNA sequence ATGTCGTTCATCGGGTCACAAATCCATTGGATCTGGCATAATCTAAACTTTGGCGTCTACCAACTTGCTGATTGGACGGTTACTAACCACACTTGTCGTCTTGTGGTTTCGTCTCATTGTCTGTTCATTGCGTGGTCTTTTGTTCATAAGCAACTAGCATATCCGAACCGCTTAAAAGTCTGAACCGAAGAATAAACCGCGTCGTCGGCACAAAAGGGCTGAAAAACTTAGAATTTTTTTGGAAAAAATGGGACCAATTTAGACCGCTGGTGTAGAAAAAAAAGAAAAGAAAAAGAAAAAGAAAAGAAACCTTCTTCTACTGCCCTCCCGCCTCTTGGATTTTGGAGTTTCCATTCCAGTTACATTTTCTCTGCACCACATTTTCTTTCTTTGCTCAAGTATTTCTCAGACACCGGAAGTTGAAGAGAGGATTTTACTGCCAGTGGTAT Coding sequence (CDS) ATGTCGTTCATCGGGTCACAAATCCATTGGATCTGGCATAATCTAAACTTTGGCGTCTACCAACTTGCTGATTGGACGGTTACTAACCACACTTGTCGTCTTGTGGTTTCGTCTCATTGTCTGTTCATTGCGTGGTCTTTTGTTCATAAGCAACTAGCATATCCGAACCGCTTAAAAGTCTGAACCGAAGAATAAACCGCGTCGTCGGCACAAAAGGGCTGAAAAACTTAGAATTTTTTTGGAAAAAATGGGACCAATTTAGACCGCTGGTGTAGAAAAAAAAGAAAAGAAAAAGAAAAAGAAAAGAAACCTTCTTCTACTGCCCTCCCGCCTCTTGGATTTTGGAGTTTCCATTCCAGTTACATTTTCTCTGCACCACATTTTCTTTCTTTGCTCAAGTATTTCTCAGACACCGGAAGTTGAAGAGAGGATTTTACTGCCAGTGGTAT Protein sequence MSFIGSQIHWIWHNLNFGVYQLADWTVTNHTCRLVVSSHCLFIAWSFVHKQLAYPNRLKV*TEE*TASSAQKG*KT*NFFGKNGTNLDRWCRKKRKEKEKEKKPSSTALPPLGFWSFHSSYIFSAPHFLSLLKYFSDTGS*REDFTASGX
Homology
BLAST of Chy1G009550 vs. ExPASy TrEMBL
Match: A0A0A0K8R9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G219220 PE=4 SV=1) HSP 1 Score: 219.9 bits (559), Expect = 7.0e-54 Identity = 110/138 (79.71%), Postives = 112/138 (81.16%), Query Frame = 0
Query: 1 MSFIGSQIHWIWHNLNFGVYQLADWTVTNHTCRLVVSSHCLFIAWSFVHKQLAYPNRLKV 60
MS I SQIHWIWHNLNFGVYQLADWT TNH+CRLVVSSHCLFI WSF HKQ AYPNRLK
Sbjct: 1 MSLITSQIHWIWHNLNFGVYQLADWTFTNHSCRLVVSSHCLFIPWSFDHKQPAYPNRLKR 60
Query: 61 *TEE*TASSAQK-G*KT*NFFGKNGTNLDRWCR--KKRKEKEKEKKPSSTALPPLGFWSF 120
+ K KT FFGKNGTNLDRWCR KKRKEKEKEKKPSSTALPPLGFWSF
Sbjct: 61 SDPKNKPRRRHKRAEKTQIFFGKNGTNLDRWCRKKKKRKEKEKEKKPSSTALPPLGFWSF 120
Query: 121 HSSYIFSAPHFLSLLKYF 136
HSS IFS PHFLSLLKYF
Sbjct: 121 HSSCIFSTPHFLSLLKYF 138
BLAST of Chy1G009550 vs. NCBI nr
Match: KAE8646064.1 (hypothetical protein Csa_016379, partial [Cucumis sativus]) HSP 1 Score: 218 bits (555), Expect = 4.06e-70 Identity = 110/138 (79.71%), Postives = 112/138 (81.16%), Query Frame = 0
Query: 1 MSFIGSQIHWIWHNLNFGVYQLADWTVTNHTCRLVVSSHCLFIAWSFVHKQLAYPNRLKV 60
MS I SQIHWIWHNLNFGVYQLADWT TNH+CRLVVSSHCLFI WSF HKQ AYPNRLK
Sbjct: 1 MSLITSQIHWIWHNLNFGVYQLADWTFTNHSCRLVVSSHCLFIPWSFDHKQPAYPNRLKR 60
Query: 61 *TEE*TASSAQK-G*KT*NFFGKNGTNLDRWCRKK--RKEKEKEKKPSSTALPPLGFWSF 120
+ K KT FFGKNGTNLDRWCRKK RKEKEKEKKPSSTALPPLGFWSF
Sbjct: 61 SDPKNKPRRRHKRAEKTQIFFGKNGTNLDRWCRKKKKRKEKEKEKKPSSTALPPLGFWSF 120
Query: 121 HSSYIFSAPHFLSLLKYF 135
HSS IFS PHFLSLLKYF
Sbjct: 121 HSSCIFSTPHFLSLLKYF 138
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| A0A0A0K8R9 | 7.0e-54 | 79.71 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G219220 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAE8646064.1 | 4.06e-70 | 79.71 | hypothetical protein Csa_016379, partial [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
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Relationships
The following mRNA feature(s) are a part of this gene:
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