Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTCTATCATCAACCAATATTGAACTGACTGAAGCACGGCGTTATCTCCCACAATTATTGCCTTCGCTTCCAATCTTCCATGACCTTTCACCCATTATCCCGAAAATTCCTTCATTGCCTTCGTTTCCGATCGTCCCTAACCTTTCACCCATTATCCCGGAAGTTCCTTCATTGCCTTCGCTTCCAATCGTCCCTAATCTTCCACCCATTATCCCGAAAGTTCCTTCATTGCCTTCGATTCCATTCATCCCTAAGATTGCTCCACCTACTAGTATCCCGCCGATCGTTCCTTCTATTCCATCCACCGATTTGCCTCCCCTTCCTAATATTCCAGTCCCCTAATATCCCGAGCATTGATTCCACTCCCTAGTACGCACCAAATACTATTATCCATTTCCTCCTTATATTTCCCTTAAATCCAATTTGTCTCCCCTCAGTATTCCACCTTTGACAATATACTTGTGTGCGTTATCAAAGTAGTGGAGCTTCTCTAGACTGGAACTTTAAAGCATGAGGTTTCCTGGTGGAATTTTAATTGCTTCAAGTTCTTTCTAATCAGTCATGTAAGCTACTATTATCATGTAACTTTAAAAAGTCATATATTTAAATAAAAAATTACTATGAGTGAAAATTATCAGTGTTATTTTGATAACTACCAGACAAATAAAGTTAAATCGAAGGAGAACATCACACATTAATAAAACGGCTTTGGTTATACGAACCAAATCCAAAAATTTGTTTTAAATTAATCAATAAAAACAAATGCGAGAACCAAGGATTGTTTTAAATAATTAAGTTCAATCATTTTGTTGTTGTTTTTTACAATTTAACTTCTTATAGACATTACTTCCATTACTAGCTTTCTTCCTTTCTTCTTTTGTTAGTTACTTTACCAAAACTGTAAAATAAAAATTTCTTTCAACCATAAATATATAGAAAATTATCCTAAAAATAAGAAGAAATAGGACTAACCTTCAAAATTGTTACCAAACAAAACTTTAAAACTATGAAATTACTAGAGACATCAACACGAGTACTTGTGAATCTGTCAATGACCAAGTTTCAAGAATCAAAAGCCTAATCTCACAAAACTATCTAAATTGGAGGAGGGGATCTATTCCAGCCGATTACAATTTGATTCTACGAATTCAAATATGAATTATTTGATAGGTTACCATACAACCCAACTTAGCTGAACCAACTGGTATTGAAAGCCAATCTGTTGAAAAAGTCTAACAAGCTTCCGAACTATTAATTAAACTAACATTATAATTAAACTAACATTATAATTAAACTAAATGTCAATCAACTAGGCACGATAGTGTTTCATGTAAATCTAAATATTTTTATTACTCTGATCAAGTGATACTACGTTCTATAATAATTAGATATGAAGATTGATATAGAGCTGGTTTGATAATTTTTGGTTTTTCTAATTAAGCCTAAAAACAACCATTCAACCTCTAAATTCTTTGTTTATTATCTACGTTTTTACCTTGTTTCATGTTAGCTCTAAAAAGTAGCTATTTACTACGAGAATTGGGAATTTGAGAAAATATTCAAGTATTGAGACAAAAAGAAGAACTACGAGATCAGAAGATAATGACGGCAATATTTAGATTTCTGTTTTCTAGTATATTTCATTCGTACATCGTAAACATTTTAGGTTTTTATATAACATGAAACCCTAGAATGAAGAGGGGCAGAAAAGACAATTTACATGCACATGGCAGAGTTTAATTATTGAATTTTATATGAAAATTAACATGCTCGTAACACCTTTTTTTTTTCATATTGCGAATATGGCAAAATTAATGATATCAAACGGCTATAAGACAATAATCATAGGGCTATCGGAGGGCTATCACGATTATTAGCTTTTAAATTTACTATTTTTGCAATTTAGAAAATATAGTGACATGAACTTTATTATCATACATTTTTTTTTGCTATTTTTCCAAGTTCTCCAATTTTATATAACATACATAATATTCCAAGGCATCCAATCACTATCTGCTTGTCGTGTCCACTATCCCATTCCGGTGCATTTTCTAACTCCTTCGCGTCGTCGTCAAGAAGATTTTCGACTTGAAAAACACAAAGTGAGTGAGACAAGGACTTAATTAGTGTGGCAGTCAACCACTTCATCCACATTAGAACGTAACGAATTTTCAGAGCACCCAGAGAATTTGATCATGTGATATGACTTGAAATGTATGTATTTTGTCTTTTAATTTAGAATGATTTTTTTAATTTAGTTAGGTTTAATGTCATTTGTTAGTGATTTCAAAATTATGTTTGAGATGTCGATTCAAGTGGAAGAGGAGAAAAAGTCCAAGGAGTGCCAAAAACAGGGTAGCGCTGCGATGCTTGCGCAGCAATAACCTTGACGCTTCTTCATGAAATTGAATGTTCCAATAGGTTGGGAAAGAGCACCGCAGTGCTCAGTAAAAAGTGCTGCTATGCTATGTGTAACACAACGGTGTGAAGCAACAAAGGGTCATAAGCGCTATAGCGCTGACTAG
mRNA sequence
ATGGGTCTATCATCAACCAATATTGAACTGACTGAAGCACGGCGTTATCTCCCACAATTATTGCCTTCGCTTCCAATCTTCCATGACCTTTCACCCATTATCCCGAAAATTCCTTCATTGCCTTCGTTTCCGATCGTCCCTAACCTTTCACCCATTATCCCGGAAGTTCCTTCATTGCCTTCGCTTCCAATCGTCCCTAATCTTCCACCCATTATCCCGAAAGTTCCTTCATTGCCTTCGATTCCATTCATCCCTAAGATTGCTCCACCTACTAGTTGGGAAAGAGCACCGCAGTGCTCAGTAAAAAGTGCTGCTATGCTATGTGTAACACAACGGTGTGAAGCAACAAAGGGTCATAAGCGCTATAGCGCTGACTAG
Coding sequence (CDS)
ATGGGTCTATCATCAACCAATATTGAACTGACTGAAGCACGGCGTTATCTCCCACAATTATTGCCTTCGCTTCCAATCTTCCATGACCTTTCACCCATTATCCCGAAAATTCCTTCATTGCCTTCGTTTCCGATCGTCCCTAACCTTTCACCCATTATCCCGGAAGTTCCTTCATTGCCTTCGCTTCCAATCGTCCCTAATCTTCCACCCATTATCCCGAAAGTTCCTTCATTGCCTTCGATTCCATTCATCCCTAAGATTGCTCCACCTACTAGTTGGGAAAGAGCACCGCAGTGCTCAGTAAAAAGTGCTGCTATGCTATGTGTAACACAACGGTGTGAAGCAACAAAGGGTCATAAGCGCTATAGCGCTGACTAG
Protein sequence
MGLSSTNIELTEARRYLPQLLPSLPIFHDLSPIIPKIPSLPSFPIVPNLSPIIPEVPSLPSLPIVPNLPPIIPKVPSLPSIPFIPKIAPPTSWERAPQCSVKSAAMLCVTQRCEATKGHKRYSAD*
Homology
BLAST of Chy12G213140 vs. ExPASy TrEMBL
Match:
A0A5D3CBA5 (Formin-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2404G00010 PE=4 SV=1)
HSP 1 Score: 75.9 bits (185), Expect = 1.4e-10
Identity = 53/102 (51.96%), Postives = 67/102 (65.69%), Query Frame = 0
Query: 3 LSSTNIELTEARRYLPQLLPSL-----PIFHDLSPI-IPKIPSLPSFPIVPNLSPI---- 62
LSST I+ +EA R+L Q LPS+ P+ ++ P+ IP +P LPS P VPN P+
Sbjct: 17 LSSTTIKGSEAGRHLQQSLPSVPSISSPLLPNIPPVTIPNVPLLPSIPFVPNTPPVTIPN 76
Query: 63 --IPEVPSLPSLPIVPNLPPI-IPKVPSLPSIPFIPKIAPPT 92
IP VPSL S+P+VPN+P + IP VPSLPSIP IP I P T
Sbjct: 77 IPIPNVPSLLSIPLVPNIPSVTIPNVPSLPSIPLIPNIPPVT 118
BLAST of Chy12G213140 vs. ExPASy TrEMBL
Match:
A0A1S4E3J0 (formin-2-like OS=Cucumis melo OX=3656 GN=LOC107991890 PE=4 SV=1)
HSP 1 Score: 75.9 bits (185), Expect = 1.4e-10
Identity = 53/102 (51.96%), Postives = 67/102 (65.69%), Query Frame = 0
Query: 3 LSSTNIELTEARRYLPQLLPSL-----PIFHDLSPI-IPKIPSLPSFPIVPNLSPI---- 62
LSST I+ +EA R+L Q LPS+ P+ ++ P+ IP +P LPS P VPN P+
Sbjct: 17 LSSTTIKGSEAGRHLQQSLPSVPSISSPLLPNIPPVTIPNVPLLPSIPFVPNTPPVTIPN 76
Query: 63 --IPEVPSLPSLPIVPNLPPI-IPKVPSLPSIPFIPKIAPPT 92
IP VPSL S+P+VPN+P + IP VPSLPSIP IP I P T
Sbjct: 77 IPIPNVPSLLSIPLVPNIPSVTIPNVPSLPSIPLIPNIPPVT 118
BLAST of Chy12G213140 vs. ExPASy TrEMBL
Match:
A0A180H1P6 (Uncharacterized protein OS=Puccinia triticina (isolate 1-1 / race 1 (BBBD)) OX=630390 GN=PTTG_02477 PE=4 SV=1)
HSP 1 Score: 65.5 bits (158), Expect = 1.9e-07
Identity = 46/124 (37.10%), Postives = 71/124 (57.26%), Query Frame = 0
Query: 4 SSTNIELTEARRYLPQ-------------LLPSLPIFHDLSPIIPKIPSLPSFPIVPNLS 63
SS + + A+R++P +PS+P + P IP IPS+PS P +P+ +
Sbjct: 249 SSAAAKASRAKRHVPDDNTTVISALPSITAIPSIPSIPAI-PAIPAIPSIPSIPSIPSTT 308
Query: 64 --PIIPEVPSLPSLPIVPNLP-----PIIPKVPSLPSIPFIPKIAPPTSWERAPQCSVKS 108
P IP +P++PS+P +P++P P IP +P++PSIP IP I P+S PQ ++ S
Sbjct: 309 SIPAIPSIPAIPSIPAIPSIPAIPSIPAIPSIPAIPSIPSIPAIPLPSSAGSTPQTNLTS 368
BLAST of Chy12G213140 vs. ExPASy TrEMBL
Match:
A0A178WGX0 (Prolamin_like domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=AXX17_At1g40250 PE=4 SV=1)
HSP 1 Score: 61.6 bits (148), Expect = 2.7e-06
Identity = 40/113 (35.40%), Postives = 65/113 (57.52%), Query Frame = 0
Query: 1 MGLSSTNIELTEARRYLPQLLPSLPIFHDLSPIIPKIPSLPSFPIVPNLSPIIPEVPSLP 60
+G ++++ +A P LLP P P +P IP +P P +PN+ P +P +P +P
Sbjct: 56 IGWGTSSLSDAKAPLSAPVLLPGFPSI----PWLPNIPGIPIIPSLPNIVPSLPNIPEIP 115
Query: 61 SLPIVPNLP--PIIPKVPSLPSIPFIPKIAPPTSWERAPQCSVKSAAMLCVTQ 112
++P +PN+P P IP +P+LPSIP IP + PP W ++ S + C+T+
Sbjct: 116 NIPRIPNIPGLPNIPGLPNLPSIPRIPGL-PPLPWVKSEVVSKSAKVENCLTK 163
BLAST of Chy12G213140 vs. ExPASy TrEMBL
Match:
A0A3P9APD1 (EH domain-binding protein 1-like protein 1 OS=Esox lucius OX=8010 PE=4 SV=2)
HSP 1 Score: 59.7 bits (143), Expect = 1.0e-05
Identity = 46/100 (46.00%), Postives = 60/100 (60.00%), Query Frame = 0
Query: 21 LPSLPIFHDLSPIIPKIPSLPSFPIVPNL-----SPIIPEVPSLPSLPIVPNLP--PIIP 80
+PSLP L P +P +PS+PS P VP+L +P +P +PS+PSLP VP+LP P +P
Sbjct: 302 VPSLPSVPSL-PSVPSLPSVPSAPSVPSLPSVPSAPSVPSLPSVPSLPSVPSLPSVPSLP 361
Query: 81 KVPSLPSIPFIPKIAPPTSWERAPQCSVKSAAMLCVTQRC 114
VPS PS+P P + +S AP SV SA V RC
Sbjct: 362 SVPSAPSVPSAPSVPSASSVPSAP--SVPSAPSATVPLRC 398
BLAST of Chy12G213140 vs. NCBI nr
Match:
KAE8652802.1 (hypothetical protein Csa_022842 [Cucumis sativus])
HSP 1 Score: 119 bits (297), Expect = 2.93e-29
Identity = 73/102 (71.57%), Postives = 77/102 (75.49%), Query Frame = 0
Query: 1 MGLSSTNIELTEARRYLPQL-------------LPSLPIFHDLSPIIPKIPSLPSFPIVP 60
MGLSSTNIELTEARRYLPQL LPS PI DLSPIIPKIPSLP I P
Sbjct: 15 MGLSSTNIELTEARRYLPQLFPSIPSVISGVPSLPSFPIIPDLSPIIPKIPSLP---IAP 74
Query: 61 NLSPIIPEVPSLPSLPIVPNLPPIIPKVPSLPSIPFIPKIAP 89
NL PIIP VPSLPSLPIVPNLPPIIP+VPSLPS+P +P + P
Sbjct: 75 NLPPIIPGVPSLPSLPIVPNLPPIIPRVPSLPSLPIVPNLPP 113
BLAST of Chy12G213140 vs. NCBI nr
Match:
XP_016902796.1 (PREDICTED: formin-2-like [Cucumis melo] >KAA0038820.1 formin-2-like [Cucumis melo var. makuwa] >TYK08468.1 formin-2-like [Cucumis melo var. makuwa])
HSP 1 Score: 72.8 bits (177), Expect = 6.83e-13
Identity = 53/102 (51.96%), Postives = 67/102 (65.69%), Query Frame = 0
Query: 3 LSSTNIELTEARRYLPQLLPSLP-----IFHDLSPI-IPKIPSLPSFPIVPNLSPI---- 62
LSST I+ +EA R+L Q LPS+P + ++ P+ IP +P LPS P VPN P+
Sbjct: 17 LSSTTIKGSEAGRHLQQSLPSVPSISSPLLPNIPPVTIPNVPLLPSIPFVPNTPPVTIPN 76
Query: 63 --IPEVPSLPSLPIVPNLPPI-IPKVPSLPSIPFIPKIAPPT 91
IP VPSL S+P+VPN+P + IP VPSLPSIP IP I P T
Sbjct: 77 IPIPNVPSLLSIPLVPNIPSVTIPNVPSLPSIPLIPNIPPVT 118
BLAST of Chy12G213140 vs. NCBI nr
Match:
OAV98957.1 (hypothetical protein PTTG_02477 [Puccinia triticina 1-1 BBBD Race 1])
HSP 1 Score: 62.8 bits (151), Expect = 1.87e-08
Identity = 41/94 (43.62%), Postives = 61/94 (64.89%), Query Frame = 0
Query: 21 LPSLPIFHDLSPIIPKIPSLPSFPIVPNLS--PIIPEVPSLPSLPIVPNLP-----PIIP 80
+PS+P + P IP IPS+PS P +P+ + P IP +P++PS+P +P++P P IP
Sbjct: 279 IPSIPSIPAI-PAIPAIPSIPSIPSIPSTTSIPAIPSIPAIPSIPAIPSIPAIPSIPAIP 338
Query: 81 KVPSLPSIPFIPKIAPPTSWERAPQCSVKSAAML 107
+P++PSIP IP I P+S PQ ++ SAA L
Sbjct: 339 SIPAIPSIPSIPAIPLPSSAGSTPQTNLTSAAQL 371
BLAST of Chy12G213140 vs. NCBI nr
Match:
KAG7648731.1 (Prolamin-like domain [Arabidopsis thaliana x Arabidopsis arenosa] >OAP17496.1 hypothetical protein AXX17_AT1G40250 [Arabidopsis thaliana])
HSP 1 Score: 59.3 bits (142), Expect = 1.45e-07
Identity = 40/113 (35.40%), Postives = 65/113 (57.52%), Query Frame = 0
Query: 1 MGLSSTNIELTEARRYLPQLLPSLPIFHDLSPIIPKIPSLPSFPIVPNLSPIIPEVPSLP 60
+G ++++ +A P LLP P P +P IP +P P +PN+ P +P +P +P
Sbjct: 56 IGWGTSSLSDAKAPLSAPVLLPGFPSI----PWLPNIPGIPIIPSLPNIVPSLPNIPEIP 115
Query: 61 SLPIVPNLP--PIIPKVPSLPSIPFIPKIAPPTSWERAPQCSVKSAAMLCVTQ 111
++P +PN+P P IP +P+LPSIP IP + PP W ++ S + C+T+
Sbjct: 116 NIPRIPNIPGLPNIPGLPNLPSIPRIPGL-PPLPWVKSEVVSKSAKVENCLTK 163
BLAST of Chy12G213140 vs. NCBI nr
Match:
XP_028976810.2 (titin isoform X10 [Esox lucius])
HSP 1 Score: 58.5 bits (140), Expect = 6.03e-07
Identity = 46/99 (46.46%), Postives = 59/99 (59.60%), Query Frame = 0
Query: 22 PSLPIFHDLSPIIPKIPSLPSFPIVPNL-----SPIIPEVPSLPSLPIVPNLP--PIIPK 81
PSLP L P +P +PS+PS P VP+L +P +P +PS+PSLP VP+LP P +P
Sbjct: 309 PSLPSVPSL-PSVPSLPSVPSAPSVPSLPSVPSAPSVPSLPSVPSLPSVPSLPSVPSLPS 368
Query: 82 VPSLPSIPFIPKIAPPTSWERAPQCSVKSAAMLCVTQRC 113
VPS PS+P P + +S AP SV SA V RC
Sbjct: 369 VPSAPSVPSAPSVPSASSVPSAP--SVPSAPSATVPLRC 404
BLAST of Chy12G213140 vs. TAIR 10
Match:
AT1G44224.1 (ECA1 gametogenesis related family protein )
HSP 1 Score: 58.2 bits (139), Expect = 5.7e-09
Identity = 44/111 (39.64%), Postives = 67/111 (60.36%), Query Frame = 0
Query: 1 MGLSSTNIELTEARRYLPQLLPSLPIFHDLSPIIPKIPSLPSFPIVPNLSPIIPEVPSLP 60
+G ++++ ++A P LLP P L P IP IP +PS P +P+L P IPE+P++P
Sbjct: 56 IGWGTSSLSDSKAPLSPPVLLPGFPSIPWL-PNIPGIPIIPSLPNIPSL-PTIPEIPNIP 115
Query: 61 SLPIVPNLPPIIPKVPSLPSIPFIPKIAPPTSWERAPQCSVKSAAMLCVTQ 112
+P +P LP IP +P+LPSIP IP + PP W ++ S + C+T+
Sbjct: 116 RIPNIPGLPN-IPGLPNLPSIPRIPGL-PPLPWVKSEVVSKSAKVENCLTK 162
BLAST of Chy12G213140 vs. TAIR 10
Match:
AT5G15780.1 (Pollen Ole e 1 allergen and extensin family protein )
HSP 1 Score: 43.5 bits (101), Expect = 1.5e-04
Identity = 32/83 (38.55%), Postives = 48/83 (57.83%), Query Frame = 0
Query: 18 PQLLPSLPIFHDL-------SPIIPKIPSLPSFPIVPNLSPIIPEVPSLPSLPIVPNLPP 77
P ++P P+ + +P+IP PSLP P++P P +P +P LP+ P P LPP
Sbjct: 269 PSIIPPNPLIPSIPTPTLPPNPLIPSPPSLPPIPLIPT-PPTLPTIPLLPT-PPTPTLPP 328
Query: 78 I--IPKVPSLPSIPFIPKIAPPT 92
I IP +P LP +P +P + PP+
Sbjct: 329 IPTIPTLPPLPVLPPVPIVNPPS 349
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3CBA5 | 1.4e-10 | 51.96 | Formin-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2404G00010... | [more] |
| A0A1S4E3J0 | 1.4e-10 | 51.96 | formin-2-like OS=Cucumis melo OX=3656 GN=LOC107991890 PE=4 SV=1 | [more] |
| A0A180H1P6 | 1.9e-07 | 37.10 | Uncharacterized protein OS=Puccinia triticina (isolate 1-1 / race 1 (BBBD)) OX=6... | [more] |
| A0A178WGX0 | 2.7e-06 | 35.40 | Prolamin_like domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=AXX17... | [more] |
| A0A3P9APD1 | 1.0e-05 | 46.00 | EH domain-binding protein 1-like protein 1 OS=Esox lucius OX=8010 PE=4 SV=2 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAE8652802.1 | 2.93e-29 | 71.57 | hypothetical protein Csa_022842 [Cucumis sativus] | [more] |
| XP_016902796.1 | 6.83e-13 | 51.96 | PREDICTED: formin-2-like [Cucumis melo] >KAA0038820.1 formin-2-like [Cucumis mel... | [more] |
| OAV98957.1 | 1.87e-08 | 43.62 | hypothetical protein PTTG_02477 [Puccinia triticina 1-1 BBBD Race 1] | [more] |
| KAG7648731.1 | 1.45e-07 | 35.40 | Prolamin-like domain [Arabidopsis thaliana x Arabidopsis arenosa] >OAP17496.1 hy... | [more] |
| XP_028976810.2 | 6.03e-07 | 46.46 | titin isoform X10 [Esox lucius] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT1G44224.1 | 5.7e-09 | 39.64 | ECA1 gametogenesis related family protein | [more] |
| AT5G15780.1 | 1.5e-04 | 38.55 | Pollen Ole e 1 allergen and extensin family protein | [more] |
