|
|
Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGTTGAATCCTCCCTGTAACTGTGGGTCTAAAGCACGTGCATCTGTAGTTAAGCATGTGCTTTGTTCACTGATTAAGGCAAGAATTAGACTGTATTTGTTGGCTGGTGCCTTAACAGGTAAGGGTCCTACCAAACCCTTGGCCCATTCCACCCATTTGCTCTGTTGACTGACCTAATGTAAGCTCATTATTTTATTTTATATGCTCTCAATCCCTTTTCTTCTTCTTTACATAATGATGTTATCCAGTTTGAAGCCGTAGTTTATTTCCTATGTCCTTAGCTATATCATGGATTTGACTTGACCCAATATATACTTGAGTAGTGAGAACCAGATGGATTAGATGGTCACAACTTTTGGGCAAATTGTGGGTTTTCCTTTCTCCCTGCCCAGTCCCTTTTGTATCCTAGCTGGTTTCATGATGAAATTACAAATTAGTGACTAGTGGAGTATCTAATCATGAAAGCTGTCCAAATCATGAATTTACACTCCATCTGTGTGAGAGAGGGGCCGTTGTATCTTACAATTTAGATTTAGAGAACAAGTAGCAGAAACATTCTTAGACTCCCTTGTCTAATCAATCACTCTTAAGGAGACGTTTAGGACAACAAAGACGTTGCTAAGACCAAAGCAGCAACTAAGCAAATGGTGGATGCTTCTTCTTTCCTGTTTTATCAACACGATATTGTAGAGAAGAGATTAA mRNA sequence ATGTTGAATCCTCCCTGTAACTGTGGGTCTAAAGCACGTGCATCTGTAGTTAAGCATGTGCTTTGTTCACTGATTAAGGCAAGAATTAGACTGTATTTGTTGGCTGGTGCCTTAACAGTCCCTTTTCTTCTTCTTTACATAATGATGTTATCCAGTTTGAAGCCGTAAGATTAA Coding sequence (CDS) ATGTTGAATCCTCCCTGTAACTGTGGGTCTAAAGCACGTGCATCTGTAGTTAAGCATGTGCTTTGTTCACTGATTAAGGCAAGAATTAGACTGTATTTGTTGGCTGGTGCCTTAACAGTCCCTTTTCTTCTTCTTTACATAATGATGTTATCCAGTTTGAAGCCGTAAGATTAA Protein sequence MLNPPCNCGSKARASVVKHVLCSLIKARIRLYLLAGALTVPFLLLYIMMLSSLKP*D*
Homology
BLAST of Chy12G211430 vs. ExPASy TrEMBL
Match: A0A0A0LYG4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G699570 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 1.4e-18 Identity = 52/54 (96.30%), Postives = 53/54 (98.15%), Query Frame = 0
Query: 1 MLNPPCNCGSKARASVVKHVLCSLIKARIRLYLLAGALTVPFLLLYIMMLSSLK 55
MLNPPCNCGSK RASVVKHVLCSLIKARIRLYLLAGALTVPFLLLYIMMLSSL+
Sbjct: 1 MLNPPCNCGSKPRASVVKHVLCSLIKARIRLYLLAGALTVPFLLLYIMMLSSLE 54
BLAST of Chy12G211430 vs. NCBI nr
Match: KGN66828.1 (hypothetical protein Csa_006838 [Cucumis sativus]) HSP 1 Score: 100 bits (248), Expect = 3.43e-26 Identity = 52/54 (96.30%), Postives = 53/54 (98.15%), Query Frame = 0
Query: 1 MLNPPCNCGSKARASVVKHVLCSLIKARIRLYLLAGALTVPFLLLYIMMLSSLK 54
MLNPPCNCGSK RASVVKHVLCSLIKARIRLYLLAGALTVPFLLLYIMMLSSL+
Sbjct: 1 MLNPPCNCGSKPRASVVKHVLCSLIKARIRLYLLAGALTVPFLLLYIMMLSSLE 54
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LYG4 | 1.4e-18 | 96.30 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G699570 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KGN66828.1 | 3.43e-26 | 96.30 | hypothetical protein Csa_006838 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| cellular_component |
GO:0016021 |
integral component of membrane |
|
