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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGTTGAATCCTCCCTGTAACTGTGGGTCTAAAGCACGTGCATCTGTAGTTAAGCATGTGCTTTGTTCACTGATTAAGGCAAGAATTAGACTGTATTTGTTGGCTGGTGCCTTAACAGGTAAGGGTCCTACCAAACCCTTGGCCCATTCCACCCATTTGCTCTGTTGACTGACCTAATGTAAGCTCATTATTTTATTTTATATGCTCTCAATCCCTTTTCTTCTTCTTTACATAATGATGTTATCCAGTTTGAAGCCGTAGTTTATTTCCTATGTCCTTAGCTATATCATGGATTTGACTTGACCCAATATATACTTGAGTAGTGAGAACCAGATGGATTAGATGGTCACAACTTTTGGGCAAATTGTGGGTTTTCCTTTCTCCCTGCCCAGTCCCTTTTGTATCCTAGCTGGTTTCATGATGAAATTACAAATTAGTGACTAGTGGAGTATCTAATCATGAAAGCTGTCCAAATCATGAATTTACACTCCATCTGTGTGAGAGAGGGGCCGTTGTATCTTACAATTTAGATTTAGAGAACAAGTAGCAGAAACATTCTTAGACTCCCTTGTCTAATCAATCACTCTTAAGGAGACGTTTAGGACAACAAAGACGTTGCTAAGACCAAAGCAGCAACTAAGCAAATGGTGGATGCTTCTTCTTTCCTGTTTTATCAACACGATATTGTAGAGAAGAGATTAA mRNA sequence ATGTTGAATCCTCCCTGTAACTGTGGGTCTAAAGCACGTGCATCTGTAGTTAAGCATGTGCTTTGTTCACTGATTAAGGCAAGAATTAGACTGTATTTGTTGGCTGGTGCCTTAACAGTCCCTTTTCTTCTTCTTTACATAATGATGTTATCCAGTTTGAAGCCGTAAGATTAA Coding sequence (CDS) ATGTTGAATCCTCCCTGTAACTGTGGGTCTAAAGCACGTGCATCTGTAGTTAAGCATGTGCTTTGTTCACTGATTAAGGCAAGAATTAGACTGTATTTGTTGGCTGGTGCCTTAACAGTCCCTTTTCTTCTTCTTTACATAATGATGTTATCCAGTTTGAAGCCGTAAGATTAA Protein sequence MLNPPCNCGSKARASVVKHVLCSLIKARIRLYLLAGALTVPFLLLYIMMLSSLKP*D*
Homology
BLAST of Chy12G211430.1 vs. ExPASy TrEMBL
Match: A0A0A0LYG4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G699570 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 1.4e-18 Identity = 52/54 (96.30%), Postives = 53/54 (98.15%), Query Frame = 0
Query: 1 MLNPPCNCGSKARASVVKHVLCSLIKARIRLYLLAGALTVPFLLLYIMMLSSLK 55
MLNPPCNCGSK RASVVKHVLCSLIKARIRLYLLAGALTVPFLLLYIMMLSSL+
Sbjct: 1 MLNPPCNCGSKPRASVVKHVLCSLIKARIRLYLLAGALTVPFLLLYIMMLSSLE 54
BLAST of Chy12G211430.1 vs. NCBI nr
Match: KGN66828.1 (hypothetical protein Csa_006838 [Cucumis sativus]) HSP 1 Score: 100 bits (248), Expect = 3.43e-26 Identity = 52/54 (96.30%), Postives = 53/54 (98.15%), Query Frame = 0
Query: 1 MLNPPCNCGSKARASVVKHVLCSLIKARIRLYLLAGALTVPFLLLYIMMLSSLK 54
MLNPPCNCGSK RASVVKHVLCSLIKARIRLYLLAGALTVPFLLLYIMMLSSL+
Sbjct: 1 MLNPPCNCGSKPRASVVKHVLCSLIKARIRLYLLAGALTVPFLLLYIMMLSSLE 54
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LYG4 | 1.4e-18 | 96.30 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G699570 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KGN66828.1 | 3.43e-26 | 96.30 | hypothetical protein Csa_006838 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Chy12G211430.1.exon1 | Chy12G211430.1.exon1 | exon |
| Chy12G211430.1.exon2 | Chy12G211430.1.exon2 | exon |
| Chy12G211430.1.exon3 | Chy12G211430.1.exon3 | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Chy12G211430.1.cds1 | Chy12G211430.1.cds1 | CDS |
| Chy12G211430.1.cds2 | Chy12G211430.1.cds2 | CDS |
| Chy12G211430.1.cds3 | Chy12G211430.1.cds3 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Chy12G211430.1 | Chy12G211430.1-protein | polypeptide |
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| cellular_component |
GO:0016021 |
integral component of membrane |
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