Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATACTTCTCTTCCTCCCTAAATGGTGTGGGACACCGTTGCGACAACGGAAAGAAAGAGATGTTACCAATCGGTGAATCTCTGTTAGGTGCTGACGGTGGCTGCGATCGCCTGGAACAAGCTCTCCGAGAATGTCACAAGCGAGTTCCAGAAGGTCCGGCCCGGCGGTCAGCCTGCCGACACCTGAACCGATCTCTTGCTGAGTGTCTGGTGGCGACGGCTTGTCCTAGCGAGGCGGAGGCGGTACGAACCCTCTGCTCCAGCGGCGGAACCGCTCTCAAGAGATCGCAGTGCGAGCAAGCTAAGTTTTCGCTCTCTTTCTGCCTCTCCTCTCTACAATTTTGAAACCCTAGATCATTGAAATCAGTTTAGAAAAATGGGAAAGCTGTAGGTTGGGGATCGCATCGGGGAAGATGGATTAATGAGTATGCGAAGATAATGGAGCACTCGTGTTTTTAAAATTTCCTTAGAACAAACAAATCTTCAAACATGATTGAAGTTGAAGGTCTGATCCTGAGAATTGAGAAAGAATGTGAATTCATACCCCTTATCGAGGAGAAAAACATCAAAATTGTTGAATATACCGAGTGAAATTCCTTCCGAGTCGCATAATTTTGTCATTAGCAACTATATATTTTGGTTTTGTTATAGAACATCTAATTGATATCAATTGGAATTCTCAATGTCAAACTCTGAATTTTGTTCAAAT
mRNA sequence
AAATACTTCTCTTCCTCCCTAAATGGTGTGGGACACCGTTGCGACAACGGAAAGAAAGAGATGTTACCAATCGGTGAATCTCTGTTAGGTGCTGACGGTGGCTGCGATCGCCTGGAACAAGCTCTCCGAGAATGTCACAAGCGAGTTCCAGAAGGTCCGGCCCGGCGGTCAGCCTGCCGACACCTGAACCGATCTCTTGCTGAGTGTCTGGTGGCGACGGCTTGTCCTAGCGAGGCGGAGGCGGTACGAACCCTCTGCTCCAGCGGCGGAACCGCTCTCAAGAGATCGCAGTGCGAGCAAGCTAAGTTTTCGCTCTCTTTCTGCCTCTCCTCTCTACAATTTTGAAACCCTAGATCATTGAAATCAGTTTAGAAAAATGGGAAAGCTGTAGGTTGGGGATCGCATCGGGGAAGATGGATTAATGAGTATGCGAAGATAATGGAGCACTCGTGTTTTTAAAATTTCCTTAGAACAAACAAATCTTCAAACATGATTGAAGTTGAAGGTCTGATCCTGAGAATTGAGAAAGAATGTGAATTCATACCCCTTATCGAGGAGAAAAACATCAAAATTGTTGAATATACCGAGTGAAATTCCTTCCGAGTCGCATAATTTTGTCATTAGCAACTATATATTTTGGTTTTGTTATAGAACATCTAATTGATATCAATTGGAATTCTCAATGTCAAACTCTGAATTTTGTTCAAAT
Coding sequence (CDS)
AAATACTTCTCTTCCTCCCTAAATGGTGTGGGACACCGTTGCGACAACGGAAAGAAAGAGATGTTACCAATCGGTGAATCTCTGTTAGGTGCTGACGGTGGCTGCGATCGCCTGGAACAAGCTCTCCGAGAATGTCACAAGCGAGTTCCAGAAGGTCCGGCCCGGCGGTCAGCCTGCCGACACCTGAACCGATCTCTTGCTGAGTGTCTGGTGGCGACGGCTTGTCCTAGCGAGGCGGAGGCGGTACGAACCCTCTGCTCCAGCGGCGGAACCGCTCTCAAGAGATCGCAGTGCGAGCAAGCTAAGTTTTCGCTCTCTTTCTGCCTCTCCTCTCTACAATTTTGAAACCCTAGATCATTGAAATCAGTTTAGAAAAATGGGAAAGCTGTAGGTTGGGGATCGCATCGGGGAAGATGGATTAATGAGTATGCGAAGATAATGGAGCACTCGTGTTTTTAAAATTTCCTTAGAACAAACAAATCTTCAAACATGATTGAAGTTGAAGGTCTGATCCTGAGAATTGAGAAAGAATGTGAATTCATACCCCTTATCGAGGAGAAAAACATCAAAATTGTTGAATATACCGAGTGAAATTCCTTCCGAGTCGCATAATTTTGTCATTAGCAACTATATATTTTGGTTTTGTTATAGAACATCTAATTGATATCAATTGGAATTCTCAATGTCAAACTCTGAATTTTGTTCAAAT
Protein sequence
KYFSSSLNGVGHRCDNGKKEMLPIGESLLGADGGCDRLEQALRECHKRVPEGPARRSACRHLNRSLAECLVATACPSEAEAVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQF*NPRSLKSV*KNGKAVGWGSHRGRWINEYAKIMEHSCF*NFLRTNKSSNMIEVEGLILRIEKECEFIPLIEEKNIKIVEYTE*NSFRVA*FCH*QLYILVLL*NI*LISIGILNVKL*ILFKX
Homology
BLAST of Chy12G211060 vs. ExPASy TrEMBL
Match:
A0A0A0LYC1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G702000 PE=4 SV=1)
HSP 1 Score: 185.7 bits (470), Expect = 2.3e-43
Identity = 91/94 (96.81%), Postives = 92/94 (97.87%), Query Frame = 0
Query: 21 MLPIGESLLGADGGCDRLEQALRECHKRVPEGPARRSACRHLNRSLAECLVATACPSEAE 80
MLP+GES LG DGGCDRLEQALRECHKRVPEGPARRSACRHLNRSLAECLVATACPSEAE
Sbjct: 1 MLPMGESPLGGDGGCDRLEQALRECHKRVPEGPARRSACRHLNRSLAECLVATACPSEAE 60
Query: 81 AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQF 115
AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQF
Sbjct: 61 AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQF 94
BLAST of Chy12G211060 vs. ExPASy TrEMBL
Match:
A0A5D3CLT3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G00190 PE=4 SV=1)
HSP 1 Score: 176.8 bits (447), Expect = 1.1e-40
Identity = 87/94 (92.55%), Postives = 89/94 (94.68%), Query Frame = 0
Query: 21 MLPIGESLLGADGGCDRLEQALRECHKRVPEGPARRSACRHLNRSLAECLVATACPSEAE 80
MLPIGES + D GC+RLEQALRECHKRVPEGPARRSACRHLNRSLAECLVATACPSE E
Sbjct: 1 MLPIGESPMCGDDGCERLEQALRECHKRVPEGPARRSACRHLNRSLAECLVATACPSEVE 60
Query: 81 AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQF 115
AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQF
Sbjct: 61 AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQF 94
BLAST of Chy12G211060 vs. ExPASy TrEMBL
Match:
A0A1S3C8S8 (uncharacterized protein LOC103498267 OS=Cucumis melo OX=3656 GN=LOC103498267 PE=4 SV=1)
HSP 1 Score: 176.8 bits (447), Expect = 1.1e-40
Identity = 87/94 (92.55%), Postives = 89/94 (94.68%), Query Frame = 0
Query: 21 MLPIGESLLGADGGCDRLEQALRECHKRVPEGPARRSACRHLNRSLAECLVATACPSEAE 80
MLPIGES + D GC+RLEQALRECHKRVPEGPARRSACRHLNRSLAECLVATACPSE E
Sbjct: 1 MLPIGESPMCGDDGCERLEQALRECHKRVPEGPARRSACRHLNRSLAECLVATACPSEVE 60
Query: 81 AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQF 115
AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQF
Sbjct: 61 AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQF 94
BLAST of Chy12G211060 vs. ExPASy TrEMBL
Match:
A0A6J1K2P5 (uncharacterized protein LOC111490507 OS=Cucurbita maxima OX=3661 GN=LOC111490507 PE=4 SV=1)
HSP 1 Score: 161.4 bits (407), Expect = 4.7e-36
Identity = 76/93 (81.72%), Postives = 84/93 (90.32%), Query Frame = 0
Query: 21 MLPIGESLLGADGGCDRLEQALRECHKRVPEGPARRSACRHLNRSLAECLVATACPSEAE 80
M+P G++ +G DGGC+RLEQALR+CHKR+PEGPARRS C HLNRS AECLVAT CP+EAE
Sbjct: 1 MVPTGKAPIGGDGGCERLEQALRDCHKRLPEGPARRSGCWHLNRSFAECLVATVCPNEAE 60
Query: 81 AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQ 114
AVRTLCSSGGTALKRSQCEQAKFS S CLSSLQ
Sbjct: 61 AVRTLCSSGGTALKRSQCEQAKFSFSLCLSSLQ 93
BLAST of Chy12G211060 vs. ExPASy TrEMBL
Match:
A0A6J1CN74 (uncharacterized protein LOC111012670 OS=Momordica charantia OX=3673 GN=LOC111012670 PE=4 SV=1)
HSP 1 Score: 161.4 bits (407), Expect = 4.7e-36
Identity = 79/95 (83.16%), Postives = 88/95 (92.63%), Query Frame = 0
Query: 21 MLPIGESLL--GADGGCDRLEQALRECHKRVPEGPARRSACRHLNRSLAECLVATACPSE 80
MLP GE+ + G GGC+RLEQALR+CH+RVP+GPARRSACRHLNRSLAECLVATACP+E
Sbjct: 14 MLPTGEAPISGGGVGGCERLEQALRDCHRRVPDGPARRSACRHLNRSLAECLVATACPNE 73
Query: 81 AEAVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQ 114
AEAVRTLCS+ GTALKRSQC+QAKFSLSFCLSSLQ
Sbjct: 74 AEAVRTLCSTAGTALKRSQCQQAKFSLSFCLSSLQ 108
BLAST of Chy12G211060 vs. NCBI nr
Match:
XP_004145445.1 (uncharacterized protein LOC101219184 [Cucumis sativus])
HSP 1 Score: 183 bits (465), Expect = 7.70e-56
Identity = 91/94 (96.81%), Postives = 92/94 (97.87%), Query Frame = 0
Query: 21 MLPIGESLLGADGGCDRLEQALRECHKRVPEGPARRSACRHLNRSLAECLVATACPSEAE 80
MLP+GES LG DGGCDRLEQALRECHKRVPEGPARRSACRHLNRSLAECLVATACPSEAE
Sbjct: 1 MLPMGESPLGGDGGCDRLEQALRECHKRVPEGPARRSACRHLNRSLAECLVATACPSEAE 60
Query: 81 AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQF 114
AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQF
Sbjct: 61 AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQF 94
BLAST of Chy12G211060 vs. NCBI nr
Match:
XP_038893663.1 (uncharacterized protein LOC120082530 [Benincasa hispida])
HSP 1 Score: 180 bits (456), Expect = 2.08e-54
Identity = 89/98 (90.82%), Postives = 93/98 (94.90%), Query Frame = 0
Query: 17 GKKEMLPIGESLLGADGGCDRLEQALRECHKRVPEGPARRSACRHLNRSLAECLVATACP 76
GKKEMLP G + + DGGC+RLEQALRECHKR+PEGPARRSACRHLNRSLAECLVATACP
Sbjct: 2 GKKEMLPTGGASICGDGGCERLEQALRECHKRLPEGPARRSACRHLNRSLAECLVATACP 61
Query: 77 SEAEAVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQF 114
SEAEAVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQF
Sbjct: 62 SEAEAVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQF 99
BLAST of Chy12G211060 vs. NCBI nr
Match:
XP_008459043.1 (PREDICTED: uncharacterized protein LOC103498267 [Cucumis melo] >KAA0043206.1 uncharacterized protein E6C27_scaffold110G00780 [Cucumis melo var. makuwa] >TYK12262.1 uncharacterized protein E5676_scaffold302G00190 [Cucumis melo var. makuwa])
HSP 1 Score: 174 bits (442), Expect = 2.37e-52
Identity = 87/94 (92.55%), Postives = 89/94 (94.68%), Query Frame = 0
Query: 21 MLPIGESLLGADGGCDRLEQALRECHKRVPEGPARRSACRHLNRSLAECLVATACPSEAE 80
MLPIGES + D GC+RLEQALRECHKRVPEGPARRSACRHLNRSLAECLVATACPSE E
Sbjct: 1 MLPIGESPMCGDDGCERLEQALRECHKRVPEGPARRSACRHLNRSLAECLVATACPSEVE 60
Query: 81 AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQF 114
AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQF
Sbjct: 61 AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQF 94
BLAST of Chy12G211060 vs. NCBI nr
Match:
XP_023542217.1 (uncharacterized protein LOC111802182 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 159 bits (403), Expect = 1.91e-46
Identity = 76/93 (81.72%), Postives = 84/93 (90.32%), Query Frame = 0
Query: 21 MLPIGESLLGADGGCDRLEQALRECHKRVPEGPARRSACRHLNRSLAECLVATACPSEAE 80
M+P G++ +G DGGC+RLEQALR+CHKR+PEGPARRS C HLNRS AECLVAT CP+EAE
Sbjct: 1 MVPTGKAPIGGDGGCERLEQALRDCHKRLPEGPARRSGCGHLNRSFAECLVATVCPNEAE 60
Query: 81 AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQ 113
AVRTLCSSGGTALKRSQCEQAKFS S CLSSLQ
Sbjct: 61 AVRTLCSSGGTALKRSQCEQAKFSFSLCLSSLQ 93
BLAST of Chy12G211060 vs. NCBI nr
Match:
XP_022994930.1 (uncharacterized protein LOC111490507 [Cucurbita maxima])
HSP 1 Score: 159 bits (402), Expect = 2.71e-46
Identity = 76/93 (81.72%), Postives = 84/93 (90.32%), Query Frame = 0
Query: 21 MLPIGESLLGADGGCDRLEQALRECHKRVPEGPARRSACRHLNRSLAECLVATACPSEAE 80
M+P G++ +G DGGC+RLEQALR+CHKR+PEGPARRS C HLNRS AECLVAT CP+EAE
Sbjct: 1 MVPTGKAPIGGDGGCERLEQALRDCHKRLPEGPARRSGCWHLNRSFAECLVATVCPNEAE 60
Query: 81 AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQ 113
AVRTLCSSGGTALKRSQCEQAKFS S CLSSLQ
Sbjct: 61 AVRTLCSSGGTALKRSQCEQAKFSFSLCLSSLQ 93
BLAST of Chy12G211060 vs. TAIR 10
Match:
AT1G31175.1 (unknown protein; Has 20 Blast hits to 20 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 125.2 bits (313), Expect = 7.1e-29
Identity = 63/110 (57.27%), Postives = 78/110 (70.91%), Query Frame = 0
Query: 4 SSSLNGVGHRCDNGKKEMLPIGESLLGADGGCDRLEQALRECHKRVPEGPARRSACRHLN 63
+S L+ R GK +P+ CDRLE+AL +CH+R+PEGPARRS CRHLN
Sbjct: 11 TSELHREMRRIHTGKIREIPM--------KSCDRLEEALLQCHRRMPEGPARRSGCRHLN 70
Query: 64 RSLAECLVATACPSEAEAVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQ 114
++ AEC+VA ACP E+EAVR+LCSSGGT+LKR QCE A+ SLS CLS Q
Sbjct: 71 KAFAECVVAEACPEESEAVRSLCSSGGTSLKRKQCEYAQLSLSLCLSRHQ 112
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LYC1 | 2.3e-43 | 96.81 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G702000 PE=4 SV=1 | [more] |
| A0A5D3CLT3 | 1.1e-40 | 92.55 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A1S3C8S8 | 1.1e-40 | 92.55 | uncharacterized protein LOC103498267 OS=Cucumis melo OX=3656 GN=LOC103498267 PE=... | [more] |
| A0A6J1K2P5 | 4.7e-36 | 81.72 | uncharacterized protein LOC111490507 OS=Cucurbita maxima OX=3661 GN=LOC111490507... | [more] |
| A0A6J1CN74 | 4.7e-36 | 83.16 | uncharacterized protein LOC111012670 OS=Momordica charantia OX=3673 GN=LOC111012... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_004145445.1 | 7.70e-56 | 96.81 | uncharacterized protein LOC101219184 [Cucumis sativus] | [more] |
| XP_038893663.1 | 2.08e-54 | 90.82 | uncharacterized protein LOC120082530 [Benincasa hispida] | [more] |
| XP_008459043.1 | 2.37e-52 | 92.55 | PREDICTED: uncharacterized protein LOC103498267 [Cucumis melo] >KAA0043206.1 unc... | [more] |
| XP_023542217.1 | 1.91e-46 | 81.72 | uncharacterized protein LOC111802182 [Cucurbita pepo subsp. pepo] | [more] |
| XP_022994930.1 | 2.71e-46 | 81.72 | uncharacterized protein LOC111490507 [Cucurbita maxima] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT1G31175.1 | 7.1e-29 | 57.27 | unknown protein; Has 20 Blast hits to 20 proteins in 10 species: Archae - 0; Bac... | [more] |
