Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACAATTTTACTGACGAAGAACTTAGTGTTGATGAGTTGAATGCAACATTTGGAATTGAGGATGATGAACATCTTGGTACTGAAAATGAAACCCCAAAGCAGATATGTAGACCACGAGGACCAACTATTATGTTCGATGTAATTCGCATTAGAAGTTTGGGAGAGAAGAAGGTAGTGATGTACAATGAAGACGGAGTACCTATTGGTGAGAATGGAGCAAAGTTGAAGTCTTTCATATGTACTGCAACACATTATCATGTCCCGATCACATATACATCTTGGAAAAGTGTGCCTGTAGAACTGAAAGATAAAATATTCAGTACGGTTGAGGTATATATAATTTCAATGTGCTTTTATTGATAATGTTCCTGATGTACACTTTATTAATTACTTTTAAATATTTAGGCTGCATTCGTCATTGATCCAAGATCTAGGAAAAATATTCTCCAAACTGCAGGCATTTCGTTTCATCAGTTTAAGTGTTGGCTAACAACGAAATACATTATGCCACATAAGGATGAACCGCAACTCCTACAAGTTCCACCAGAAAAGTATTCATTTATTGATCAACATCATTGGGAAGAATTTGTAAGGTCGAGATTGTGTGAAACTTTTCAGGTATGTTACTTTCTCACTAACAAATATATTTTGTAAGGTCTAGATTGTGTGTTACTTTTTCACTAACAATATATTTGAAAATAAGAAAAAAGACAATTGCAACAAGATAGACAATCTAAGAACAAGTATAACCATATGATTTCGAGGAAGGGTTATGCCAATCTTATTGAGGAAATG
mRNA sequence
ATGGACAATTTTACTGACGAAGAACTTAGTTGAAAATGAAACCCCAAAGCAGATATGTAGACCACGAGGACCAACTATTATGTTCGATGTAATTCGCATTAGAAGTTTGGGAGAGAAGAAGGTAGTGATGTACAATGAAGACGGAGTACCTATTGGTGAGAATGGAGCAAAGTTGAAGTCTTTCATATGTACTGCAACACATTATCATGTCCCGATCACATATACATCTTGGAAAAGTGTGCCTGTAGAACTGAAAGATAAAATATTCAGTACGGTTGAGGCTGCATTCGTCATTGATCCAAGATCTAGGAAAAATATTCTCCAAACTGCAGGCATTTCGTTTCATCAGTTTAAGTGTTGGCTAACAACGAAATACATTATGCCACATAAGGATGAACCGCAACTCCTACAAGTTCCACCAGAAAAGTATTCATTTATTGATCAACATCATTGGGAAGAATTTGTAAGGTCGAGATTGTGTGAAACTTTTCAGAAAAAAGACAATTGCAACAAGATAGACAATCTAAGAACAAGTATAACCATATGATTTCGAGGAAGGGTTATGCCAATCTTATTGAGGAAATG
Coding sequence (CDS)
ATGGACAATTTTACTGACGAAGAACTTAGTTGAAAATGAAACCCCAAAGCAGATATGTAGACCACGAGGACCAACTATTATGTTCGATGTAATTCGCATTAGAAGTTTGGGAGAGAAGAAGGTAGTGATGTACAATGAAGACGGAGTACCTATTGGTGAGAATGGAGCAAAGTTGAAGTCTTTCATATGTACTGCAACACATTATCATGTCCCGATCACATATACATCTTGGAAAAGTGTGCCTGTAGAACTGAAAGATAAAATATTCAGTACGGTTGAGGCTGCATTCGTCATTGATCCAAGATCTAGGAAAAATATTCTCCAAACTGCAGGCATTTCGTTTCATCAGTTTAAGTGTTGGCTAACAACGAAATACATTATGCCACATAAGGATGAACCGCAACTCCTACAAGTTCCACCAGAAAAGTATTCATTTATTGATCAACATCATTGGGAAGAATTTGTAAGGTCGAGATTGTGTGAAACTTTTCAGAAAAAAGACAATTGCAACAAGATAGACAATCTAAGAACAAGTATAACCATATGATTTCGAGGAAGGGTTATGCCAATCTTATTGAGGAAATG
Protein sequence
MDNFTDEELS*K*NPKADM*TTRTNYYVRCNSH*KFGREEGSDVQ*RRSTYW*EWSKVEVFHMYCNTLSCPDHIYILEKCACRTER*NIQYG*GCIRH*SKI*EKYSPNCRHFVSSV*VLANNEIHYAT*G*TATPTSSTRKVFIY*STSLGRICKVEIV*NFSEKRQLQQDRQSKNKYNHMISRKGYANLIEEM
Homology
BLAST of Chy10G174500 vs. ExPASy TrEMBL
Match:
A0A5A7VQR7 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold50G00060 PE=4 SV=1)
HSP 1 Score: 62.0 bits (149), Expect = 3.2e-06
Identity = 30/33 (90.91%), Postives = 30/33 (90.91%), Query Frame = 0
Query: 163 FSEKRQLQQDRQSKNKYNHMISRKGYANLIEEM 196
F EKRQLQQDRQSKNKYNH ISRKGYANL EEM
Sbjct: 240 FQEKRQLQQDRQSKNKYNHRISRKGYANLKEEM 272
BLAST of Chy10G174500 vs. ExPASy TrEMBL
Match:
A0A5A7V3I1 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G005170 PE=4 SV=1)
HSP 1 Score: 62.0 bits (149), Expect = 3.2e-06
Identity = 30/33 (90.91%), Postives = 30/33 (90.91%), Query Frame = 0
Query: 163 FSEKRQLQQDRQSKNKYNHMISRKGYANLIEEM 196
F EKRQLQQDRQSKNKYNH ISRKGYANL EEM
Sbjct: 144 FQEKRQLQQDRQSKNKYNHRISRKGYANLKEEM 176
BLAST of Chy10G174500 vs. ExPASy TrEMBL
Match:
A0A5D3DGP6 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold530G00560 PE=4 SV=1)
HSP 1 Score: 62.0 bits (149), Expect = 3.2e-06
Identity = 30/33 (90.91%), Postives = 30/33 (90.91%), Query Frame = 0
Query: 163 FSEKRQLQQDRQSKNKYNHMISRKGYANLIEEM 196
F EKRQLQQDRQSKNKYNH ISRKGYANL EEM
Sbjct: 240 FQEKRQLQQDRQSKNKYNHRISRKGYANLKEEM 272
BLAST of Chy10G174500 vs. ExPASy TrEMBL
Match:
A0A5A7TJM6 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold320G00890 PE=4 SV=1)
HSP 1 Score: 60.8 bits (146), Expect = 7.1e-06
Identity = 31/43 (72.09%), Postives = 34/43 (79.07%), Query Frame = 0
Query: 153 RICKVEIV*NFSEKRQLQQDRQSKNKYNHMISRKGYANLIEEM 196
R+C+ F EKRQLQQDR+SKNKYNH ISRKGYANL EEM
Sbjct: 288 RLCE-----TFQEKRQLQQDRRSKNKYNHRISRKGYANLKEEM 325
BLAST of Chy10G174500 vs. ExPASy TrEMBL
Match:
A0A5A7U440 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13G001860 PE=4 SV=1)
HSP 1 Score: 60.5 bits (145), Expect = 9.2e-06
Identity = 29/33 (87.88%), Postives = 30/33 (90.91%), Query Frame = 0
Query: 163 FSEKRQLQQDRQSKNKYNHMISRKGYANLIEEM 196
F EKRQLQQDR+SKNKYNH ISRKGYANL EEM
Sbjct: 98 FQEKRQLQQDRRSKNKYNHRISRKGYANLKEEM 130
BLAST of Chy10G174500 vs. NCBI nr
Match:
KAE8648270.1 (hypothetical protein Csa_017799, partial [Cucumis sativus])
HSP 1 Score: 61.2 bits (147), Expect = 1.58e-08
Identity = 31/44 (70.45%), Postives = 33/44 (75.00%), Query Frame = 0
Query: 152 GRICKVEIV*NFSEKRQLQQDRQSKNKYNHMISRKGYANLIEEM 195
R+C+ F EKR LQQDRQSKNKYNH ISRKGY NLIEEM
Sbjct: 64 SRLCET-----FQEKRLLQQDRQSKNKYNHKISRKGYVNLIEEM 102
BLAST of Chy10G174500 vs. NCBI nr
Match:
XP_031742558.1 (uncharacterized protein LOC116404374 [Cucumis sativus])
HSP 1 Score: 60.5 bits (145), Expect = 4.39e-08
Identity = 30/45 (66.67%), Postives = 35/45 (77.78%), Query Frame = 0
Query: 151 LGRICKVEIV*NFSEKRQLQQDRQSKNKYNHMISRKGYANLIEEM 195
+ R+C+ F EKR LQQDR+SKNKYNH ISRKGYANLIE+M
Sbjct: 1 MSRLCET-----FQEKRLLQQDRRSKNKYNHRISRKGYANLIEKM 40
BLAST of Chy10G174500 vs. NCBI nr
Match:
KAA0050004.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])
HSP 1 Score: 60.5 bits (145), Expect = 5.98e-08
Identity = 29/33 (87.88%), Postives = 30/33 (90.91%), Query Frame = 0
Query: 163 FSEKRQLQQDRQSKNKYNHMISRKGYANLIEEM 195
F EKRQLQQDR+SKNKYNH ISRKGYANL EEM
Sbjct: 98 FQEKRQLQQDRRSKNKYNHRISRKGYANLKEEM 130
BLAST of Chy10G174500 vs. NCBI nr
Match:
KAE8648328.1 (hypothetical protein Csa_023122, partial [Cucumis sativus])
HSP 1 Score: 59.7 bits (143), Expect = 1.29e-07
Identity = 30/44 (68.18%), Postives = 33/44 (75.00%), Query Frame = 0
Query: 152 GRICKVEIV*NFSEKRQLQQDRQSKNKYNHMISRKGYANLIEEM 195
R+C+ F EKR LQQDR+SKNKYNH ISRKGY NLIEEM
Sbjct: 5 SRLCET-----FQEKRLLQQDRRSKNKYNHRISRKGYVNLIEEM 43
BLAST of Chy10G174500 vs. NCBI nr
Match:
KAA0062148.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])
HSP 1 Score: 62.0 bits (149), Expect = 1.99e-07
Identity = 30/33 (90.91%), Postives = 30/33 (90.91%), Query Frame = 0
Query: 163 FSEKRQLQQDRQSKNKYNHMISRKGYANLIEEM 195
F EKRQLQQDRQSKNKYNH ISRKGYANL EEM
Sbjct: 144 FQEKRQLQQDRQSKNKYNHRISRKGYANLKEEM 176
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7VQR7 | 3.2e-06 | 90.91 | Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119... | [more] |
| A0A5A7V3I1 | 3.2e-06 | 90.91 | Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119... | [more] |
| A0A5D3DGP6 | 3.2e-06 | 90.91 | Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119... | [more] |
| A0A5A7TJM6 | 7.1e-06 | 72.09 | Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119... | [more] |
| A0A5A7U440 | 9.2e-06 | 87.88 | Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAE8648270.1 | 1.58e-08 | 70.45 | hypothetical protein Csa_017799, partial [Cucumis sativus] | [more] |
| XP_031742558.1 | 4.39e-08 | 66.67 | uncharacterized protein LOC116404374 [Cucumis sativus] | [more] |
| KAA0050004.1 | 5.98e-08 | 87.88 | putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa] | [more] |
| KAE8648328.1 | 1.29e-07 | 68.18 | hypothetical protein Csa_023122, partial [Cucumis sativus] | [more] |
| KAA0062148.1 | 1.99e-07 | 90.91 | putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
