Chy10G174500.1 (mRNA) Cucumber (hystrix) v1
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Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACAATTTTACTGACGAAGAACTTAGTGTTGATGAGTTGAATGCAACATTTGGAATTGAGGATGATGAACATCTTGGTACTGAAAATGAAACCCCAAAGCAGATATGTAGACCACGAGGACCAACTATTATGTTCGATGTAATTCGCATTAGAAGTTTGGGAGAGAAGAAGGTAGTGATGTACAATGAAGACGGAGTACCTATTGGTGAGAATGGAGCAAAGTTGAAGTCTTTCATATGTACTGCAACACATTATCATGTCCCGATCACATATACATCTTGGAAAAGTGTGCCTGTAGAACTGAAAGATAAAATATTCAGTACGGTTGAGGTATATATAATTTCAATGTGCTTTTATTGATAATGTTCCTGATGTACACTTTATTAATTACTTTTAAATATTTAGGCTGCATTCGTCATTGATCCAAGATCTAGGAAAAATATTCTCCAAACTGCAGGCATTTCGTTTCATCAGTTTAAGTGTTGGCTAACAACGAAATACATTATGCCACATAAGGATGAACCGCAACTCCTACAAGTTCCACCAGAAAAGTATTCATTTATTGATCAACATCATTGGGAAGAATTTGTAAGGTCGAGATTGTGTGAAACTTTTCAGGTATGTTACTTTCTCACTAACAAATATATTTTGTAAGGTCTAGATTGTGTGTTACTTTTTCACTAACAATATATTTGAAAATAAGAAAAAAGACAATTGCAACAAGATAGACAATCTAAGAACAAGTATAACCATATGATTTCGAGGAAGGGTTATGCCAATCTTATTGAGGAAATGATGGACAATTTTACTGACGAAGAACTTAGTTGAAAATGAAACCCCAAAGCAGATATGTAGACCACGAGGACCAACTATTATGTTCGATGTAATTCGCATTAGAAGTTTGGGAGAGAAGAAGGTAGTGATGTACAATGAAGACGGAGTACCTATTGGTGAGAATGGAGCAAAGTTGAAGTCTTTCATATGTACTGCAACACATTATCATGTCCCGATCACATATACATCTTGGAAAAGTGTGCCTGTAGAACTGAAAGATAAAATATTCAGTACGGTTGAGGCTGCATTCGTCATTGATCCAAGATCTAGGAAAAATATTCTCCAAACTGCAGGCATTTCGTTTCATCAGTTTAAGTGTTGGCTAACAACGAAATACATTATGCCACATAAGGATGAACCGCAACTCCTACAAGTTCCACCAGAAAAGTATTCATTTATTGATCAACATCATTGGGAAGAATTTGTAAGGTCGAGATTGTGTGAAACTTTTCAGAAAAAAGACAATTGCAACAAGATAGACAATCTAAGAACAAGTATAACCATATGATTTCGAGGAAGGGTTATGCCAATCTTATTGAGGAAATG ATGGACAATTTTACTGACGAAGAACTTAGTTGAAAATGAAACCCCAAAGCAGATATGTAGACCACGAGGACCAACTATTATGTTCGATGTAATTCGCATTAGAAGTTTGGGAGAGAAGAAGGTAGTGATGTACAATGAAGACGGAGTACCTATTGGTGAGAATGGAGCAAAGTTGAAGTCTTTCATATGTACTGCAACACATTATCATGTCCCGATCACATATACATCTTGGAAAAGTGTGCCTGTAGAACTGAAAGATAAAATATTCAGTACGGTTGAGGCTGCATTCGTCATTGATCCAAGATCTAGGAAAAATATTCTCCAAACTGCAGGCATTTCGTTTCATCAGTTTAAGTGTTGGCTAACAACGAAATACATTATGCCACATAAGGATGAACCGCAACTCCTACAAGTTCCACCAGAAAAGTATTCATTTATTGATCAACATCATTGGGAAGAATTTGTAAGGTCGAGATTGTGTGAAACTTTTCAGAAAAAAGACAATTGCAACAAGATAGACAATCTAAGAACAAGTATAACCATATGATTTCGAGGAAGGGTTATGCCAATCTTATTGAGGAAATG MDNFTDEELS*K*NPKADM*TTRTNYYVRCNSH*KFGREEGSDVQ*RRSTYW*EWSKVEVFHMYCNTLSCPDHIYILEKCACRTER*NIQYG*GCIRH*SKI*EKYSPNCRHFVSSV*VLANNEIHYAT*G*TATPTSSTRKVFIY*STSLGRICKVEIV*NFSEKRQLQQDRQSKNKYNHMISRKGYANLIEEM Homology
BLAST of Chy10G174500.1 vs. ExPASy TrEMBL
Match: A0A5A7VQR7 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold50G00060 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 3.2e-06 Identity = 30/33 (90.91%), Postives = 30/33 (90.91%), Query Frame = 0
BLAST of Chy10G174500.1 vs. ExPASy TrEMBL
Match: A0A5A7V3I1 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G005170 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 3.2e-06 Identity = 30/33 (90.91%), Postives = 30/33 (90.91%), Query Frame = 0
BLAST of Chy10G174500.1 vs. ExPASy TrEMBL
Match: A0A5D3DGP6 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold530G00560 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 3.2e-06 Identity = 30/33 (90.91%), Postives = 30/33 (90.91%), Query Frame = 0
BLAST of Chy10G174500.1 vs. ExPASy TrEMBL
Match: A0A5A7TJM6 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold320G00890 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 7.1e-06 Identity = 31/43 (72.09%), Postives = 34/43 (79.07%), Query Frame = 0
BLAST of Chy10G174500.1 vs. ExPASy TrEMBL
Match: A0A5A7U440 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13G001860 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 9.2e-06 Identity = 29/33 (87.88%), Postives = 30/33 (90.91%), Query Frame = 0
BLAST of Chy10G174500.1 vs. NCBI nr
Match: KAE8648270.1 (hypothetical protein Csa_017799, partial [Cucumis sativus]) HSP 1 Score: 61.2 bits (147), Expect = 1.58e-08 Identity = 31/44 (70.45%), Postives = 33/44 (75.00%), Query Frame = 0
BLAST of Chy10G174500.1 vs. NCBI nr
Match: XP_031742558.1 (uncharacterized protein LOC116404374 [Cucumis sativus]) HSP 1 Score: 60.5 bits (145), Expect = 4.39e-08 Identity = 30/45 (66.67%), Postives = 35/45 (77.78%), Query Frame = 0
BLAST of Chy10G174500.1 vs. NCBI nr
Match: KAA0050004.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa]) HSP 1 Score: 60.5 bits (145), Expect = 5.98e-08 Identity = 29/33 (87.88%), Postives = 30/33 (90.91%), Query Frame = 0
BLAST of Chy10G174500.1 vs. NCBI nr
Match: KAE8648328.1 (hypothetical protein Csa_023122, partial [Cucumis sativus]) HSP 1 Score: 59.7 bits (143), Expect = 1.29e-07 Identity = 30/44 (68.18%), Postives = 33/44 (75.00%), Query Frame = 0
BLAST of Chy10G174500.1 vs. NCBI nr
Match: KAA0062148.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa]) HSP 1 Score: 62.0 bits (149), Expect = 1.99e-07 Identity = 30/33 (90.91%), Postives = 30/33 (90.91%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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