Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCGATCTGTTTCTAGTAGAGCCCACCTTCAATGACGAACAGGATGTTGGCTCTGCGAAGTCGAGAATTTCTCTGTTAAGTAAATTAGAATCTGTTTTATGGAAGTTGCTGACTTCTGGAGGACGTTCTGAGGTTCGATTATGGCTTTCTAATACCATAGCTAGTGTGACATCTATCAGTCCCCAGCATCAGCGGGACCTGTTTATGGCATTACTGAGACGGAAGCCATTGAAGTGGGCCTTCGCATCTCAATTACTGCAAATGTTGTTTGAAAAGAGATCACGAGAGGCAGGGATTCTCATTGCTAAGAGAAGCTACATAATGGAAAATTTTTTCGAAGGTGACTGTTCTGTTTACTCATTGTCAAATTTAGCTATAGCAATTCCAGCTGATAGCAAGAACACTCAACCGAATCTTCATTCTTTCAAATTGATTTAA
mRNA sequence
ATGATCGATCTGTTTCTAGTAGAGCCCACCTTCAATGACGAACAGGATGTTGGCTCTGCGAAGTCGAGAATTTCTCTGTTAAGTAAATTAGAATCTGTTTTATGGAAGTTGCTGACTTCTGGAGGACGTTCTGAGGTTCGATTATGGCTTTCTAATACCATAGCTAGTGTGACATCTATCAGTCCCCAGCATCAGCGGGACCTGTTTATGGCATTACTGAGACGGAAGCCATTGAAGTGGGCCTTCGCATCTCAATTACTGCAAATGTTGTTTGAAAAGAGATCACGAGAGGCAGGGATTCTCATTGCTAAGAGAAGCTACATAATGGAAAATTTTTTCGAAGGTGACTGTTCTGTTTACTCATTGTCAAATTTAGCTATAGCAATTCCAGCTGATAGCAAGAACACTCAACCGAATCTTCATTCTTTCAAATTGATTTAA
Coding sequence (CDS)
ATGATCGATCTGTTTCTAGTAGAGCCCACCTTCAATGACGAACAGGATGTTGGCTCTGCGAAGTCGAGAATTTCTCTGTTAAGTAAATTAGAATCTGTTTTATGGAAGTTGCTGACTTCTGGAGGACGTTCTGAGGTTCGATTATGGCTTTCTAATACCATAGCTAGTGTGACATCTATCAGTCCCCAGCATCAGCGGGACCTGTTTATGGCATTACTGAGACGGAAGCCATTGAAGTGGGCCTTCGCATCTCAATTACTGCAAATGTTGTTTGAAAAGAGATCACGAGAGGCAGGGATTCTCATTGCTAAGAGAAGCTACATAATGGAAAATTTTTTCGAAGGTGACTGTTCTGTTTACTCATTGTCAAATTTAGCTATAGCAATTCCAGCTGATAGCAAGAACACTCAACCGAATCTTCATTCTTTCAAATTGATTTAA
Protein sequence
MIDLFLVEPTFNDEQDVGSAKSRISLLSKLESVLWKLLTSGGRSEVRLWLSNTIASVTSISPQHQRDLFMALLRRKPLKWAFASQLLQMLFEKRSREAGILIAKRSYIMENFFEGDCSVYSLSNLAIAIPADSKNTQPNLHSFKLI
Homology
BLAST of CcUC10G187220 vs. NCBI nr
Match:
XP_008448630.1 (PREDICTED: uncharacterized protein LOC103490747 isoform X1 [Cucumis melo])
HSP 1 Score: 221.1 bits (562), Expect = 6.3e-54
Identity = 118/132 (89.39%), Postives = 121/132 (91.67%), Query Frame = 0
Query: 1 MIDLFLVEPTFNDEQDVGSAKSRISLLSKLESVLWKLLTSGGRSEVRLWLSNTIASVTSI 60
MIDLF++E TFNDEQDV SAK RISLLS+LESVLWKLLT GGRSEVRLWLSNTIASVTSI
Sbjct: 21 MIDLFILESTFNDEQDVSSAKLRISLLSELESVLWKLLTCGGRSEVRLWLSNTIASVTSI 80
Query: 61 SPQHQRDLFMALLRRKPLKWAFASQLLQMLFEKRSREAGILIAKRSYIMENFFEGDCSVY 120
SPQHQRDLFM LLRRKPLKWAFASQLLQMLFEKRSREAGILIAKRSYIME FFEGDCSV
Sbjct: 81 SPQHQRDLFMTLLRRKPLKWAFASQLLQMLFEKRSREAGILIAKRSYIMEKFFEGDCSVC 140
Query: 121 SL-SNLAIAIPA 132
L SNLAI I A
Sbjct: 141 LLMSNLAIEILA 152
BLAST of CcUC10G187220 vs. NCBI nr
Match:
KAA0053014.1 (uncharacterized protein E6C27_scaffold344G001260 [Cucumis melo var. makuwa] >TYK11470.1 uncharacterized protein E5676_scaffold139G001270 [Cucumis melo var. makuwa])
HSP 1 Score: 221.1 bits (562), Expect = 6.3e-54
Identity = 118/132 (89.39%), Postives = 121/132 (91.67%), Query Frame = 0
Query: 1 MIDLFLVEPTFNDEQDVGSAKSRISLLSKLESVLWKLLTSGGRSEVRLWLSNTIASVTSI 60
MIDLF++E TFNDEQDV SAK RISLLS+LESVLWKLLT GGRSEVRLWLSNTIASVTSI
Sbjct: 1 MIDLFILESTFNDEQDVSSAKLRISLLSELESVLWKLLTCGGRSEVRLWLSNTIASVTSI 60
Query: 61 SPQHQRDLFMALLRRKPLKWAFASQLLQMLFEKRSREAGILIAKRSYIMENFFEGDCSVY 120
SPQHQRDLFM LLRRKPLKWAFASQLLQMLFEKRSREAGILIAKRSYIME FFEGDCSV
Sbjct: 61 SPQHQRDLFMTLLRRKPLKWAFASQLLQMLFEKRSREAGILIAKRSYIMEKFFEGDCSVC 120
Query: 121 SL-SNLAIAIPA 132
L SNLAI I A
Sbjct: 121 LLMSNLAIEILA 132
BLAST of CcUC10G187220 vs. NCBI nr
Match:
XP_038891380.1 (uncharacterized protein LOC120080808 [Benincasa hispida])
HSP 1 Score: 208.4 bits (529), Expect = 4.2e-50
Identity = 106/116 (91.38%), Postives = 110/116 (94.83%), Query Frame = 0
Query: 1 MIDLFLVEPTFNDEQDVGSAKSRISLLSKLESVLWKLLTSGGRSEVRLWLSNTIASVTSI 60
MIDLFL+EP FNDEQDV SAK RISLLSKLESVLWKLLTSGGRSEVRLWL+N+IASVTSI
Sbjct: 1 MIDLFLLEPNFNDEQDVSSAKLRISLLSKLESVLWKLLTSGGRSEVRLWLTNSIASVTSI 60
Query: 61 SPQHQRDLFMALLRRKPLKWAFASQLLQMLFEKRSREAGILIAKRSYIMENFFEGD 117
SPQHQRDLFM LLRRKP KWAFASQLLQMLFEKRSREAGILIAKRSYIME FFEG+
Sbjct: 61 SPQHQRDLFMTLLRRKPFKWAFASQLLQMLFEKRSREAGILIAKRSYIMEKFFEGN 116
BLAST of CcUC10G187220 vs. NCBI nr
Match:
XP_008448632.1 (PREDICTED: uncharacterized protein LOC103490747 isoform X2 [Cucumis melo])
HSP 1 Score: 207.2 bits (526), Expect = 9.5e-50
Identity = 106/116 (91.38%), Postives = 110/116 (94.83%), Query Frame = 0
Query: 1 MIDLFLVEPTFNDEQDVGSAKSRISLLSKLESVLWKLLTSGGRSEVRLWLSNTIASVTSI 60
MIDLF++E TFNDEQDV SAK RISLLS+LESVLWKLLT GGRSEVRLWLSNTIASVTSI
Sbjct: 21 MIDLFILESTFNDEQDVSSAKLRISLLSELESVLWKLLTCGGRSEVRLWLSNTIASVTSI 80
Query: 61 SPQHQRDLFMALLRRKPLKWAFASQLLQMLFEKRSREAGILIAKRSYIMENFFEGD 117
SPQHQRDLFM LLRRKPLKWAFASQLLQMLFEKRSREAGILIAKRSYIME FFEG+
Sbjct: 81 SPQHQRDLFMTLLRRKPLKWAFASQLLQMLFEKRSREAGILIAKRSYIMEKFFEGN 136
BLAST of CcUC10G187220 vs. NCBI nr
Match:
XP_004146104.1 (uncharacterized protein LOC101206874 [Cucumis sativus] >KGN55716.1 hypothetical protein Csa_011038 [Cucumis sativus])
HSP 1 Score: 204.9 bits (520), Expect = 4.7e-49
Identity = 106/116 (91.38%), Postives = 108/116 (93.10%), Query Frame = 0
Query: 1 MIDLFLVEPTFNDEQDVGSAKSRISLLSKLESVLWKLLTSGGRSEVRLWLSNTIASVTSI 60
MIDLFL E TFNDEQDV S K RISLLS+LESVLWKLLT GGRSEVRLWLSNTIASVTSI
Sbjct: 21 MIDLFLQESTFNDEQDVSSEKLRISLLSELESVLWKLLTCGGRSEVRLWLSNTIASVTSI 80
Query: 61 SPQHQRDLFMALLRRKPLKWAFASQLLQMLFEKRSREAGILIAKRSYIMENFFEGD 117
SPQHQRDLFM LLRRKPLKWAFASQLLQMLFEKRSREAGILIAKRSYIME FFEG+
Sbjct: 81 SPQHQRDLFMTLLRRKPLKWAFASQLLQMLFEKRSREAGILIAKRSYIMEKFFEGN 136
BLAST of CcUC10G187220 vs. ExPASy TrEMBL
Match:
A0A5A7UCN7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001270 PE=4 SV=1)
HSP 1 Score: 221.1 bits (562), Expect = 3.1e-54
Identity = 118/132 (89.39%), Postives = 121/132 (91.67%), Query Frame = 0
Query: 1 MIDLFLVEPTFNDEQDVGSAKSRISLLSKLESVLWKLLTSGGRSEVRLWLSNTIASVTSI 60
MIDLF++E TFNDEQDV SAK RISLLS+LESVLWKLLT GGRSEVRLWLSNTIASVTSI
Sbjct: 1 MIDLFILESTFNDEQDVSSAKLRISLLSELESVLWKLLTCGGRSEVRLWLSNTIASVTSI 60
Query: 61 SPQHQRDLFMALLRRKPLKWAFASQLLQMLFEKRSREAGILIAKRSYIMENFFEGDCSVY 120
SPQHQRDLFM LLRRKPLKWAFASQLLQMLFEKRSREAGILIAKRSYIME FFEGDCSV
Sbjct: 61 SPQHQRDLFMTLLRRKPLKWAFASQLLQMLFEKRSREAGILIAKRSYIMEKFFEGDCSVC 120
Query: 121 SL-SNLAIAIPA 132
L SNLAI I A
Sbjct: 121 LLMSNLAIEILA 132
BLAST of CcUC10G187220 vs. ExPASy TrEMBL
Match:
A0A1S3BK58 (uncharacterized protein LOC103490747 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490747 PE=4 SV=1)
HSP 1 Score: 221.1 bits (562), Expect = 3.1e-54
Identity = 118/132 (89.39%), Postives = 121/132 (91.67%), Query Frame = 0
Query: 1 MIDLFLVEPTFNDEQDVGSAKSRISLLSKLESVLWKLLTSGGRSEVRLWLSNTIASVTSI 60
MIDLF++E TFNDEQDV SAK RISLLS+LESVLWKLLT GGRSEVRLWLSNTIASVTSI
Sbjct: 21 MIDLFILESTFNDEQDVSSAKLRISLLSELESVLWKLLTCGGRSEVRLWLSNTIASVTSI 80
Query: 61 SPQHQRDLFMALLRRKPLKWAFASQLLQMLFEKRSREAGILIAKRSYIMENFFEGDCSVY 120
SPQHQRDLFM LLRRKPLKWAFASQLLQMLFEKRSREAGILIAKRSYIME FFEGDCSV
Sbjct: 81 SPQHQRDLFMTLLRRKPLKWAFASQLLQMLFEKRSREAGILIAKRSYIMEKFFEGDCSVC 140
Query: 121 SL-SNLAIAIPA 132
L SNLAI I A
Sbjct: 141 LLMSNLAIEILA 152
BLAST of CcUC10G187220 vs. ExPASy TrEMBL
Match:
A0A1S3BKS3 (uncharacterized protein LOC103490747 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490747 PE=4 SV=1)
HSP 1 Score: 207.2 bits (526), Expect = 4.6e-50
Identity = 106/116 (91.38%), Postives = 110/116 (94.83%), Query Frame = 0
Query: 1 MIDLFLVEPTFNDEQDVGSAKSRISLLSKLESVLWKLLTSGGRSEVRLWLSNTIASVTSI 60
MIDLF++E TFNDEQDV SAK RISLLS+LESVLWKLLT GGRSEVRLWLSNTIASVTSI
Sbjct: 21 MIDLFILESTFNDEQDVSSAKLRISLLSELESVLWKLLTCGGRSEVRLWLSNTIASVTSI 80
Query: 61 SPQHQRDLFMALLRRKPLKWAFASQLLQMLFEKRSREAGILIAKRSYIMENFFEGD 117
SPQHQRDLFM LLRRKPLKWAFASQLLQMLFEKRSREAGILIAKRSYIME FFEG+
Sbjct: 81 SPQHQRDLFMTLLRRKPLKWAFASQLLQMLFEKRSREAGILIAKRSYIMEKFFEGN 136
BLAST of CcUC10G187220 vs. ExPASy TrEMBL
Match:
A0A0A0L6D1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G006760 PE=4 SV=1)
HSP 1 Score: 204.9 bits (520), Expect = 2.3e-49
Identity = 106/116 (91.38%), Postives = 108/116 (93.10%), Query Frame = 0
Query: 1 MIDLFLVEPTFNDEQDVGSAKSRISLLSKLESVLWKLLTSGGRSEVRLWLSNTIASVTSI 60
MIDLFL E TFNDEQDV S K RISLLS+LESVLWKLLT GGRSEVRLWLSNTIASVTSI
Sbjct: 21 MIDLFLQESTFNDEQDVSSEKLRISLLSELESVLWKLLTCGGRSEVRLWLSNTIASVTSI 80
Query: 61 SPQHQRDLFMALLRRKPLKWAFASQLLQMLFEKRSREAGILIAKRSYIMENFFEGD 117
SPQHQRDLFM LLRRKPLKWAFASQLLQMLFEKRSREAGILIAKRSYIME FFEG+
Sbjct: 81 SPQHQRDLFMTLLRRKPLKWAFASQLLQMLFEKRSREAGILIAKRSYIMEKFFEGN 136
BLAST of CcUC10G187220 vs. ExPASy TrEMBL
Match:
A0A6J1G8R1 (uncharacterized protein LOC111451855 OS=Cucurbita moschata OX=3662 GN=LOC111451855 PE=4 SV=1)
HSP 1 Score: 193.7 bits (491), Expect = 5.2e-46
Identity = 97/116 (83.62%), Postives = 103/116 (88.79%), Query Frame = 0
Query: 1 MIDLFLVEPTFNDEQDVGSAKSRISLLSKLESVLWKLLTSGGRSEVRLWLSNTIASVTSI 60
MIDLFL EP FN+E DVGSAK RISLLS+LESVLWKLL SGGRSEVRLWLSNTIAS+TSI
Sbjct: 1 MIDLFLAEPVFNEEDDVGSAKLRISLLSRLESVLWKLLASGGRSEVRLWLSNTIASMTSI 60
Query: 61 SPQHQRDLFMALLRRKPLKWAFASQLLQMLFEKRSREAGILIAKRSYIMENFFEGD 117
SPQHQR+LFM LR KPLKW FAS LLQM FEKR REAG+LIAKRSYIME FFEG+
Sbjct: 61 SPQHQRELFMTFLRSKPLKWDFASHLLQMFFEKRQREAGVLIAKRSYIMEKFFEGN 116
BLAST of CcUC10G187220 vs. TAIR 10
Match:
AT5G48340.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )
HSP 1 Score: 111.3 bits (277), Expect = 6.6e-25
Identity = 60/117 (51.28%), Postives = 82/117 (70.09%), Query Frame = 0
Query: 1 MIDLFLVEPTFNDE-QDVGSAKSRISLLSKLESVLWKLLTSGGRSEVRLWLSNTIASVTS 60
M++LFL EP +ND+ Q + + LL+KL S + L+T G RSE RLWL + ++++ S
Sbjct: 1 MVNLFLSEPKWNDDAQKSSNINVILPLLNKLGSQIQSLVTHGARSEARLWLCSALSTI-S 60
Query: 61 ISPQHQRDLFMALLRRKPLKWAFASQLLQMLFEKRSREAGILIAKRSYIMENFFEGD 117
ISP Q ++FM LLR KP K F SQ+L M+FEKR R+ G L+AKRSYI+E FFEG+
Sbjct: 61 ISPSKQLNIFMKLLRSKPRKMQFLSQVLTMMFEKRPRKLGFLLAKRSYILEKFFEGN 116
BLAST of CcUC10G187220 vs. TAIR 10
Match:
AT5G48340.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages. )
HSP 1 Score: 111.3 bits (277), Expect = 6.6e-25
Identity = 60/117 (51.28%), Postives = 82/117 (70.09%), Query Frame = 0
Query: 1 MIDLFLVEPTFNDE-QDVGSAKSRISLLSKLESVLWKLLTSGGRSEVRLWLSNTIASVTS 60
M++LFL EP +ND+ Q + + LL+KL S + L+T G RSE RLWL + ++++ S
Sbjct: 1 MVNLFLSEPKWNDDAQKSSNINVILPLLNKLGSQIQSLVTHGARSEARLWLCSALSTI-S 60
Query: 61 ISPQHQRDLFMALLRRKPLKWAFASQLLQMLFEKRSREAGILIAKRSYIMENFFEGD 117
ISP Q ++FM LLR KP K F SQ+L M+FEKR R+ G L+AKRSYI+E FFEG+
Sbjct: 61 ISPSKQLNIFMKLLRSKPRKMQFLSQVLTMMFEKRPRKLGFLLAKRSYILEKFFEGN 116
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_008448630.1 | 6.3e-54 | 89.39 | PREDICTED: uncharacterized protein LOC103490747 isoform X1 [Cucumis melo] | [more] |
| KAA0053014.1 | 6.3e-54 | 89.39 | uncharacterized protein E6C27_scaffold344G001260 [Cucumis melo var. makuwa] >TYK... | [more] |
| XP_038891380.1 | 4.2e-50 | 91.38 | uncharacterized protein LOC120080808 [Benincasa hispida] | [more] |
| XP_008448632.1 | 9.5e-50 | 91.38 | PREDICTED: uncharacterized protein LOC103490747 isoform X2 [Cucumis melo] | [more] |
| XP_004146104.1 | 4.7e-49 | 91.38 | uncharacterized protein LOC101206874 [Cucumis sativus] >KGN55716.1 hypothetical ... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7UCN7 | 3.1e-54 | 89.39 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A1S3BK58 | 3.1e-54 | 89.39 | uncharacterized protein LOC103490747 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
| A0A1S3BKS3 | 4.6e-50 | 91.38 | uncharacterized protein LOC103490747 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
| A0A0A0L6D1 | 2.3e-49 | 91.38 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G006760 PE=4 SV=1 | [more] |
| A0A6J1G8R1 | 5.2e-46 | 83.62 | uncharacterized protein LOC111451855 OS=Cucurbita moschata OX=3662 GN=LOC1114518... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT5G48340.1 | 6.6e-25 | 51.28 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0... | [more] |
| AT5G48340.2 | 6.6e-25 | 51.28 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
