CcUC05G106230 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC05G106230
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	BHLH domain-containing protein
Location	CicolChr05: 33494938 .. 33497703 (-)
RNA-Seq Expression	CcUC05G106230
Synteny	CcUC05G106230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATTGTGTGAAGGTTGTGAAGCTCTGAGTAATGGCGAACAACCCTATCCGTTGTGCACCATCTTCACAAACCGATCAAAAACTCATAGAGACGAATCGAAGAAAGGAAATGAGAGAGCTTCTCTCAAAATTTAATTCCCTCGTTCCCCATGAAAGTTCAAAGGTTTTTTTTTTTTTTTTTTTTCTCTCTTTTTAATTTATATATATGACTATATCTTATTATATTATTTTTAGTAAAAATTTTGAATAATGTTTGTGTGCAGGAAGCAAGAACAGTGGTGGATGAGGTAGAAGACGTTACGAATTACATAAAAGAATTGCAGAACCACATTGAGAAACTAAAAGAAAAAAAAGAGAAGCTAATGGGGAAATATAAAATGGTTGAGTTAGAAGATGGAAGAAGAAGTAGAAAGAAACATGAAGAAACCAAACCCAACCCCAAATTATTGGTGCAAGTTAAAGCTCATCAACTGGATTCTTCACTGCACATCCTTTTAACCACCGGATCTGATTATCACTCTATTCTTCAACAAATCCTTCTCCTCCTCCATGATAATGGAACTGACACCCTCCATGTCAATCAGACAAGGGTCAAACATCGGGTTTTTCACACAATTGTAGCTAAGGTAATTTAGATCTCGTTTAATAACTATTTTACTTCTAACACTATTCTACCTTCAAAGTTCAAACCATTTGCAATAAAACAAACTTTGTTATTATATTTTTTTATTAAGAAAAATGGTTTTTAAAAATTTCTTTTTATTTTTGAAATTTAGTTAAAAATTCACAAATTCAAATTTGTGAAAAAACTTGCAGATTTTTTTTTTTTAAAAAATGAAACAGCTAAATGATTATTTATTTTCCTTTCAACTTTTTGGTGTCTCACACAAATTAATTTTATAAAATGTGTTTAATTCATTTCATAAATAATTATTAAGAGGACAATTTGTTGTTTCATGGTTGAAAATTTGATTTCCCGCACTAGAAACTTGTGGAATTCAAAAAAGAGAATGGAAAATGGGAAAAAAAAAGTCACGTGGGTTATCTTGTTATCTACAAAAATAATTCACGTATGGAAATAAATATATATATTTTTTATCGTTTTTTTTTTTTTCTTCTTCTTTTTGAGTTCTTATCCATTAGGTTTGTGAAGATACCAGAGAAATGGTAGAAACCACGGAGAGGGAAGGAAAAGAGAGTTTTTTTTTTTAAGGTCAAATAATTAACATTTACGTTCAATTTGAAAACTGTTTTAATTTTGTATAATTAACAGATACGTGTTTTTTAAAACTAATTTATTGTTTATTCTAAACCTGACTTAAAATTTGAAAATGTTGTAGACAATAAAACAAGTGAACACTTGGATGGAAGTAGTATACTTAATTTTAAAAAATAAGAAACCAAAAAAAATTCTATTGTTTTCTCACAGTTATTTTGCAATAGTCTTCATATTTTTTAAGGTAATATATGAATCCGGTTAAAAAGACTATTTTTTAAGACTTCGTTTGGTAATTAATTATTTTTAGTTTTCGAAAATTAACCCTTAAACATTTTTTTCACCTTCAAATTTTTTGTATTTATTATATACTTTTTATCAATATTTTCAAAAACTATGAAAATTTTTTAGACAGAAAATTAATTTTAAAAAAATAATTTTTGTTATTAAGAATTTGACTGTTTTAAAATTACTATAAAAAATTGAGAAAAAATATATACTTAATTTTTTAAAACTTGAAACCAAAATCCAAATAGTTATTAAACTAGGTTGAATTAGTTTTGAAGGTTTGAATTTAAAAACCATGAAAATAGTGTTTCCAAGTTTAATTTTCCAAAACTCAAATAACATTTCAAACAACGTCAAAATTTTAATATTGGTTTCATCCATAAATTTCATGCCTACAAACTATATCTTTTGATTTTGTTCTCATTTACTATTGGAAAACGTAAGAATTAATTTAACATTTTTTTTTTCCTGAATCATTTTCTCATATTTCTTATTTGGGAATGCACGTAATAATAATGCTAATTAATATTAGGGCAAATAACAATTTATACCCCTAAACTTTGGAGGATATATCAACTTAAATCCTAAACTAATAATCGTATCAACTTAAACTTTGAACTTTCATAAATGTGTCGATTTTAACCCGAATTAATAGTTGTATTAGTTTAAACCCTAAACTTTCATAAGTGTATCAATTGAAATCCTCCATTATGTTTTATTTGGATACGGTTATAAAAGTTTAGAGTTTAAATTGATATACTTATGAAAGTTTAAGGTTTAAATTGACACATATAATTATTAGTTTGGGGTTTAAATCGATACAAACCTCAAAATTTAGGATTTAAATTGATACAATCAATTAGTTTGAGAGTTCCAATTGATACAATCTCCAAAGCTTAGGATATAAATTGATATAACATTATAGTGTGGGAGAAAAAAATGATGATAATATATTGCAAATTTAGGTGGATGGAGAAGGAATGGGGGCAGAAGATGGTGAAAGGATTTGTGAGACAGTGAAGAATTTAGTTTCAGAGTACAGAGATGGTGAATGCACTCTTTAATAATATTTCGACCACAACGTTAAACTGCTCGTGAAGATTTATGATGTCTTTTGTCCTTCTTTTTATTATTTTTTTAATTATTTTTATTTTTATTTTTTATTGATAATGCTTCAAATCAACACATTCAATAGTTTGCATTTATTGTAATGCATTATAACCCTTTGCCATGGTGAACTTCTCAGACAATTATTTGCTTCC

mRNA sequence

TTATTGTGTGAAGGTTGTGAAGCTCTGAGTAATGGCGAACAACCCTATCCGTTGTGCACCATCTTCACAAACCGATCAAAAACTCATAGAGACGAATCGAAGAAAGGAAATGAGAGAGCTTCTCTCAAAATTTAATTCCCTCGTTCCCCATGAAAGTTCAAAGGAAGCAAGAACAGTGGTGGATGAGGTAGAAGACGTTACGAATTACATAAAAGAATTGCAGAACCACATTGAGAAACTAAAAGAAAAAAAAGAGAAGCTAATGGGGAAATATAAAATGGTTGAGTTAGAAGATGGAAGAAGAAGTAGAAAGAAACATGAAGAAACCAAACCCAACCCCAAATTATTGGTGCAAGTTAAAGCTCATCAACTGGATTCTTCACTGCACATCCTTTTAACCACCGGATCTGATTATCACTCTATTCTTCAACAAATCCTTCTCCTCCTCCATGATAATGGAACTGACACCCTCCATGTCAATCAGACAAGGGTCAAACATCGGGTTTTTCACACAATTGTAGCTAAGGTGGATGGAGAAGGAATGGGGGCAGAAGATGGTGAAAGGATTTGTGAGACAGTGAAGAATTTAGTTTCAGAGTACAGAGATGGTGAATGCACTCTTTAATAATATTTCGACCACAACGTTAAACTGCTCGTGAAGATTTATGATGTCTTTTGTCCTTCTTTTTATTATTTTTTTAATTATTTTTATTTTTATTTTTTATTGATAATGCTTCAAATCAACACATTCAATAGTTTGCATTTATTGTAATGCATTATAACCCTTTGCCATGGTGAACTTCTCAGACAATTATTTGCTTCC

Coding sequence (CDS)

ATGGCGAACAACCCTATCCGTTGTGCACCATCTTCACAAACCGATCAAAAACTCATAGAGACGAATCGAAGAAAGGAAATGAGAGAGCTTCTCTCAAAATTTAATTCCCTCGTTCCCCATGAAAGTTCAAAGGAAGCAAGAACAGTGGTGGATGAGGTAGAAGACGTTACGAATTACATAAAAGAATTGCAGAACCACATTGAGAAACTAAAAGAAAAAAAAGAGAAGCTAATGGGGAAATATAAAATGGTTGAGTTAGAAGATGGAAGAAGAAGTAGAAAGAAACATGAAGAAACCAAACCCAACCCCAAATTATTGGTGCAAGTTAAAGCTCATCAACTGGATTCTTCACTGCACATCCTTTTAACCACCGGATCTGATTATCACTCTATTCTTCAACAAATCCTTCTCCTCCTCCATGATAATGGAACTGACACCCTCCATGTCAATCAGACAAGGGTCAAACATCGGGTTTTTCACACAATTGTAGCTAAGGTGGATGGAGAAGGAATGGGGGCAGAAGATGGTGAAAGGATTTGTGAGACAGTGAAGAATTTAGTTTCAGAGTACAGAGATGGTGAATGCACTCTTTAA

Protein sequence

MANNPIRCAPSSQTDQKLIETNRRKEMRELLSKFNSLVPHESSKEARTVVDEVEDVTNYIKELQNHIEKLKEKKEKLMGKYKMVELEDGRRSRKKHEETKPNPKLLVQVKAHQLDSSLHILLTTGSDYHSILQQILLLLHDNGTDTLHVNQTRVKHRVFHTIVAKVDGEGMGAEDGERICETVKNLVSEYRDGECTL

Homology

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BLAST of CcUC05G106230 vs. NCBI nr
Match: XP_008442634.2 (PREDICTED: transcription factor bHLH118-like [Cucumis melo])

HSP 1 Score: 228.4 bits (581), Expect = 5.3e-56
Identity = 122/198 (61.62%), Postives = 155/198 (78.28%), Query Frame = 0


Query: 3   NNPIRCAPSSQTDQKLIETNRRKEMRELLSKFNSLVPHESSKEA-RTVVDEVEDVTNYIK 62
           +NPIRC P+ Q+D+K +E NRRKEM+ L S  NSL+P+ +S+EA RTV D++ED TNYIK
Sbjct: 2   SNPIRCQPTPQSDRKFVERNRRKEMKSLFSTLNSLLPNHTSREAPRTVPDQLEDATNYIK 61

Query: 63  ELQNHIEKLKEKKEKLMGKYKMVELE--DGRRSRKKHEETKPNPKLLVQVKAHQLDSSLH 122
           ELQ +I+KLKEKKE+LMGK KM E E  +GRR R+   ETK  PKLL+QVKAHQ+ SS+ 
Sbjct: 62  ELQKNIQKLKEKKEELMGKNKMEEDEEAEGRRRRRFEHETK--PKLLLQVKAHQIGSSVE 121

Query: 123 ILLTTGSDYHSILQQILLLLHDNGTDTLHVNQTRVKHRVFHTIVAKVDGEGMGAEDGERI 182
           + LTTGSDYH ILQQ+L LL DNG + L+VNQ+    RVFH I A+VDGEG+G  DGERI
Sbjct: 122 VFLTTGSDYHFILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQVDGEGIGPGDGERI 181

Query: 183 CETVKNLVSEYRDGECTL 198
           C+TVK  VS+Y+D +C++
Sbjct: 182 CKTVKKFVSQYKDEQCSV 197

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BLAST of CcUC05G106230 vs. NCBI nr
Match: XP_004146605.1 (transcription factor bHLH162 isoform X1 [Cucumis sativus] >KGN64684.1 hypothetical protein Csa_013539 [Cucumis sativus])

HSP 1 Score: 218.4 bits (555), Expect = 5.5e-53
Identity = 120/197 (60.91%), Postives = 149/197 (75.63%), Query Frame = 0


Query: 3   NNPIRCAPSSQTDQKLIETNRRKEMRELLSKFNSLVPHESSKEA-RTVVDEVEDVTNYIK 62
           +NPIRC P+ Q+++K +E NRRKEM+ L S  NSL+P+++S EA RTV D++ED TNYIK
Sbjct: 2   SNPIRCQPTPQSNRKFVERNRRKEMKALFSTLNSLLPNQTSMEAPRTVPDQLEDATNYIK 61

Query: 63  ELQNHIEKLKEKKEKLMGKYKMVELEDGRRSRKKHEETKPNPKLLVQVKAHQLDSSLHIL 122
           ELQ +I+KLKEKKEKLMG  +  E E  RR R   +ETK  PKL V VKAHQ+ SS+ + 
Sbjct: 62  ELQKNIKKLKEKKEKLMGMEEDEEAEGRRRRRGYEDETK--PKLSVHVKAHQIGSSVEVF 121

Query: 123 LTTGSDYHSILQQILLLLHDNGTDTLHVNQTRVKHRVFHTIVAKVDGEG-MGAEDGERIC 182
           LTTGSDYH  LQQ+L LL DNG + L+VNQ+    RVFH I A+VDGEG +G  DGERIC
Sbjct: 122 LTTGSDYHFNLQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQVDGEGILGGGDGERIC 181

Query: 183 ETVKNLVSEYRDGECTL 198
           ETVK  VSEY+DGEC++
Sbjct: 182 ETVKKYVSEYKDGECSV 196

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BLAST of CcUC05G106230 vs. NCBI nr
Match: XP_038876951.1 (transcription factor bHLH162-like [Benincasa hispida] >XP_038876952.1 transcription factor bHLH162-like [Benincasa hispida] >XP_038876954.1 transcription factor bHLH162-like [Benincasa hispida] >XP_038876955.1 transcription factor bHLH162-like [Benincasa hispida] >XP_038876956.1 transcription factor bHLH162-like [Benincasa hispida])

HSP 1 Score: 215.7 bits (548), Expect = 3.6e-52
Identity = 122/204 (59.80%), Postives = 151/204 (74.02%), Query Frame = 0


Query: 1   MANNPIRCAPSSQTDQKLIETNRRKEMRELLSKFNSLVPHESSKEARTVVDEVEDVTNYI 60
           MANNPI C PS     KLIE N R+EM+ L S  NSL+P+++S EARTV D++E+ TNYI
Sbjct: 1   MANNPICCPPS-----KLIERNGRREMKALFSTLNSLLPNQNSGEARTVPDQLEEATNYI 60

Query: 61  KELQNHIEKLKEKKEKL------MGKYKMVELEDGRRSRKKHEETKPNPKLLVQVKAHQL 120
           KELQN+IE+LKEKKEKL       GKYKM   ED +R + KHE     P LL+QVKAH++
Sbjct: 61  KELQNNIERLKEKKEKLKQKQKVKGKYKMGVEEDEKRRKCKHE---IEPNLLLQVKAHRV 120

Query: 121 DSSLHILLTTG-SDYHSILQQILLLLHDNGTDTLHVNQTRVKHRVFHTIVAKVDGEGMGA 180
            SS+ + LTTG SDYH ILQQI+ LL  NG   L++NQ+ ++HR FH I A+VDGEGM  
Sbjct: 121 GSSVEVFLTTGISDYHFILQQIIRLLQHNGAHILNLNQSILQHRAFHKITAQVDGEGMVP 180

Query: 181 EDGERICETVKNLVSEYRDGECTL 198
           EDGERICETVKN VS+Y+DG+C+L
Sbjct: 181 EDGERICETVKNFVSQYKDGQCSL 196

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BLAST of CcUC05G106230 vs. NCBI nr
Match: XP_023542777.1 (uncharacterized protein LOC111802586 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 184.5 bits (467), Expect = 8.9e-43
Identity = 108/195 (55.38%), Postives = 144/195 (73.85%), Query Frame = 0


Query: 1   MANNPIRCAPSSQTDQKLIETNRRKEMRELLSKFNSLVPHESSKEAR-TVVDEVEDVTNY 60
           MANN I C  S++ D+KLIE NRR EM+ L S+ +SLVP++SS EA  T++D++E+ TNY
Sbjct: 1   MANNFIHCPSSAKIDRKLIERNRRAEMKALFSRLHSLVPNQSSTEAETTLLDQLENATNY 60

Query: 61  IKELQNHIEKLKEKKEKLMGKYKMVELEDGRRSRKKHEETKPNPKLLVQVKAHQLDSSLH 120
           IK+L+ ++EKLKEKKEKLM   K+ E E  RRS  K        +LLVQV+AHQ+ SSL 
Sbjct: 61  IKQLKENVEKLKEKKEKLM---KLGE-ESARRSEIK-------ARLLVQVEAHQVGSSLE 120

Query: 121 ILLTTGSDYHSILQQILLLLHDNGTDTLHVNQTRVKHRVFHTIVAKVDGEGMGAE--DGE 180
            LLTTGS+YH +L+QIL LL +NGT  +++N + VK RVFH I+A++ GEG  +E  +GE
Sbjct: 121 FLLTTGSEYHLVLKQILQLLQENGTQIVYINHSTVKDRVFHKIIAEMVGEGTTSESTEGE 180

Query: 181 RICETVKNLVSEYRD 193
           RICETVK  VS+Y+D
Sbjct: 181 RICETVKKFVSQYKD 184

[Close]

BLAST of CcUC05G106230 vs. NCBI nr
Match: KAG6573268.1 (Transcription factor basic helix-loop-helix 162, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 183.3 bits (464), Expect = 2.0e-42
Identity = 107/195 (54.87%), Postives = 143/195 (73.33%), Query Frame = 0


Query: 1   MANNPIRCAPSSQTDQKLIETNRRKEMRELLSKFNSLVPHESSKEAR-TVVDEVEDVTNY 60
           MANN I C  S++ D+KLIE NRR EM+ L S+ +SLVP++SS EA  T++D++E+ TNY
Sbjct: 22  MANNFIHCPSSAKIDRKLIERNRRAEMKALFSRLHSLVPNQSSTEAETTLLDQLENATNY 81

Query: 61  IKELQNHIEKLKEKKEKLMGKYKMVELEDGRRSRKKHEETKPNPKLLVQVKAHQLDSSLH 120
           IK+L+ ++EKLKEKKEKLM   K+ E E  R S  K        +LLVQV+AHQ+ SSL 
Sbjct: 82  IKQLKENVEKLKEKKEKLM---KLGE-ESARSSEIK-------ARLLVQVEAHQVGSSLE 141

Query: 121 ILLTTGSDYHSILQQILLLLHDNGTDTLHVNQTRVKHRVFHTIVAKVDGEGMGAE--DGE 180
            LLTTGSDYH +L+Q+L LL +NGT  +++N + VK RVFH I+A++ GEG  +E  +GE
Sbjct: 142 FLLTTGSDYHLVLKQVLQLLQENGTQIVYINHSTVKDRVFHKIIAEMVGEGTTSESIEGE 201

Query: 181 RICETVKNLVSEYRD 193
           RICETVK  VS+Y+D
Sbjct: 202 RICETVKKFVSQYKD 205

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BLAST of CcUC05G106230 vs. ExPASy Swiss-Prot
Match: F4JIJ7 (Transcription factor bHLH162 OS=Arabidopsis thaliana OX=3702 GN=BHLH162 PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 4.8e-15
Identity = 55/179 (30.73%), Postives = 95/179 (53.07%), Query Frame = 0


Query: 11  SSQTDQKLIETNRRKEMRELLSKFNSLVPHESSKEARTVVDEVEDVTNYIKELQNHIEKL 70
           S   D+K +E NRR +M+ L S+  SL+PH SS E  T+ D++++  NYIK+LQ ++EK 
Sbjct: 11  SRSVDRKTVEKNRRMQMKSLYSELISLLPHHSSTEPLTLPDQLDEAANYIKKLQVNVEKK 70

Query: 71  KEKKEKLMGKYKMVELEDGRRSRKKHEETKPNPKLLVQVKAHQLDSSLHILLTTGSDYHS 130
           +E+K  L+    + +L     S          P+ L +++  +  S  HI L T  ++  
Sbjct: 71  RERKRNLVATTTLEKLNSVGSSSVSSSVDVSVPRKLPKIEIQETGSIFHIFLVTSLEHKF 130

Query: 131 ILQQIL-LLLHDNGTDTLHVNQTRVKHRVFHTIVAKVDGEGMGAEDGERICETVKNLVS 189
           +  +I+ +L  + G +  H   + V   VFHT+  KV+    GA    +I E ++ +V+
Sbjct: 131 MFCEIIRVLTEELGAEITHAGYSIVDDAVFHTLHCKVEEHDYGAR--SQIPERLEKIVN 187

[Close]

BLAST of CcUC05G106230 vs. ExPASy TrEMBL
Match: A0A1S3B660 (transcription factor bHLH118-like OS=Cucumis melo OX=3656 GN=LOC103486444 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 2.6e-56
Identity = 122/198 (61.62%), Postives = 155/198 (78.28%), Query Frame = 0


Query: 3   NNPIRCAPSSQTDQKLIETNRRKEMRELLSKFNSLVPHESSKEA-RTVVDEVEDVTNYIK 62
           +NPIRC P+ Q+D+K +E NRRKEM+ L S  NSL+P+ +S+EA RTV D++ED TNYIK
Sbjct: 2   SNPIRCQPTPQSDRKFVERNRRKEMKSLFSTLNSLLPNHTSREAPRTVPDQLEDATNYIK 61

Query: 63  ELQNHIEKLKEKKEKLMGKYKMVELE--DGRRSRKKHEETKPNPKLLVQVKAHQLDSSLH 122
           ELQ +I+KLKEKKE+LMGK KM E E  +GRR R+   ETK  PKLL+QVKAHQ+ SS+ 
Sbjct: 62  ELQKNIQKLKEKKEELMGKNKMEEDEEAEGRRRRRFEHETK--PKLLLQVKAHQIGSSVE 121

Query: 123 ILLTTGSDYHSILQQILLLLHDNGTDTLHVNQTRVKHRVFHTIVAKVDGEGMGAEDGERI 182
           + LTTGSDYH ILQQ+L LL DNG + L+VNQ+    RVFH I A+VDGEG+G  DGERI
Sbjct: 122 VFLTTGSDYHFILQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQVDGEGIGPGDGERI 181

Query: 183 CETVKNLVSEYRDGECTL 198
           C+TVK  VS+Y+D +C++
Sbjct: 182 CKTVKKFVSQYKDEQCSV 197

[Close]

BLAST of CcUC05G106230 vs. ExPASy TrEMBL
Match: A0A0A0LUL3 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G074400 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 2.7e-53
Identity = 120/197 (60.91%), Postives = 149/197 (75.63%), Query Frame = 0


Query: 3   NNPIRCAPSSQTDQKLIETNRRKEMRELLSKFNSLVPHESSKEA-RTVVDEVEDVTNYIK 62
           +NPIRC P+ Q+++K +E NRRKEM+ L S  NSL+P+++S EA RTV D++ED TNYIK
Sbjct: 2   SNPIRCQPTPQSNRKFVERNRRKEMKALFSTLNSLLPNQTSMEAPRTVPDQLEDATNYIK 61

Query: 63  ELQNHIEKLKEKKEKLMGKYKMVELEDGRRSRKKHEETKPNPKLLVQVKAHQLDSSLHIL 122
           ELQ +I+KLKEKKEKLMG  +  E E  RR R   +ETK  PKL V VKAHQ+ SS+ + 
Sbjct: 62  ELQKNIKKLKEKKEKLMGMEEDEEAEGRRRRRGYEDETK--PKLSVHVKAHQIGSSVEVF 121

Query: 123 LTTGSDYHSILQQILLLLHDNGTDTLHVNQTRVKHRVFHTIVAKVDGEG-MGAEDGERIC 182
           LTTGSDYH  LQQ+L LL DNG + L+VNQ+    RVFH I A+VDGEG +G  DGERIC
Sbjct: 122 LTTGSDYHFNLQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQVDGEGILGGGDGERIC 181

Query: 183 ETVKNLVSEYRDGECTL 198
           ETVK  VSEY+DGEC++
Sbjct: 182 ETVKKYVSEYKDGECSV 196

[Close]

BLAST of CcUC05G106230 vs. ExPASy TrEMBL
Match: A0A6J1K2Y3 (transcription factor bHLH167-like OS=Cucurbita maxima OX=3661 GN=LOC111490185 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.8e-42
Identity = 104/195 (53.33%), Postives = 139/195 (71.28%), Query Frame = 0


Query: 1   MANNPIRCAPSSQTDQKLIETNRRKEMRELLSKFNSLVPHESSKEAR-TVVDEVEDVTNY 60
           MANN I C  S++ D+KLIE NRR EM+ L S+ +SLVP++SS EA  T++D++E+ TNY
Sbjct: 22  MANNFIHCPSSTKIDRKLIERNRRAEMKALFSRLHSLVPNQSSTEAETTLLDQLENATNY 81

Query: 61  IKELQNHIEKLKEKKEKLMGKYKMVELEDGRRSRKKHEETKPNPKLLVQVKAHQLDSSLH 120
           IK+L+ ++EKLKEK+EKLMG               +  ETK   +LLVQV+AHQ+ SSL 
Sbjct: 82  IKQLKENVEKLKEKREKLMG--------------SREGETK--ARLLVQVEAHQVGSSLE 141

Query: 121 ILLTTGSDYHSILQQILLLLHDNGTDTLHVNQTRVKHRVFHTIVAKVDGEGMGAED--GE 180
           +LLTTGSDY  +L QIL LL +NGT  +++N + VK RVFH I+A++ GEG  +E   GE
Sbjct: 142 VLLTTGSDYQFVLNQILQLLQENGTQIVYINHSTVKDRVFHKIIAEMVGEGTTSESTKGE 200

Query: 181 RICETVKNLVSEYRD 193
           RICETVK  VS+Y+D
Sbjct: 202 RICETVKKFVSQYKD 200

[Close]

BLAST of CcUC05G106230 vs. ExPASy TrEMBL
Match: A0A6J1GT92 (uncharacterized protein LOC111457229 OS=Cucurbita moschata OX=3662 GN=LOC111457229 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 1.2e-40
Identity = 105/195 (53.85%), Postives = 141/195 (72.31%), Query Frame = 0


Query: 1   MANNPIRCAPSSQTDQKLIETNRRKEMRELLSKFNSLVPHESSKEAR-TVVDEVEDVTNY 60
           MANN I    S++ D+KLIE NRR EM+ L S+ +SLVP++SS EA  T++D++E+ TNY
Sbjct: 22  MANNFIHSPSSAKIDRKLIERNRRAEMKALFSRLHSLVPNQSSMEAETTLLDQLENATNY 81

Query: 61  IKELQNHIEKLKEKKEKLMGKYKMVELEDGRRSRKKHEETKPNPKLLVQVKAHQLDSSLH 120
           IK+L+ ++EKLKEKKEKLM   K+ E E  R S  K        +LLVQV+AHQ+ SSL 
Sbjct: 82  IKQLKENVEKLKEKKEKLM---KLGE-ESARSSEIK-------ARLLVQVEAHQVGSSLE 141

Query: 121 ILLTTGSDYHSILQQILLLLHDNGTDTLHVNQTRVKHRVFHTIVAKVDGEGMGAE--DGE 180
            LLTT SDYH +L+Q+L LL +NGT  +++N + VK RVFH I+A++ GEG  +E  +GE
Sbjct: 142 FLLTTRSDYHLVLKQVLQLLQENGTQIVYINHSTVKDRVFHKIIAEMVGEGTTSESIEGE 201

Query: 181 RICETVKNLVSEYRD 193
           RICETVK  VS+Y+D
Sbjct: 202 RICETVKKFVSQYKD 205

[Close]

BLAST of CcUC05G106230 vs. ExPASy TrEMBL
Match: A0A6J1K483 (transcription factor bHLH162-like OS=Cucurbita maxima OX=3661 GN=LOC111489936 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 2.2e-39
Identity = 99/200 (49.50%), Postives = 140/200 (70.00%), Query Frame = 0


Query: 1   MANNPIRCAPSSQTDQKLIETNRRKEMRELLSKFNSLVPHESSKEARTVV-DEVEDVTNY 60
           MA+N I C  S++TDQ++IE NRR EM+ LLS+ +SLVP+++S E  T + D++E+ TNY
Sbjct: 1   MADNFIYCPSSAKTDQEIIERNRRDEMKALLSQLHSLVPNQNSTEGETTLPDQLENATNY 60

Query: 61  IKELQNHIEKLKEKKEKLMGKYKMVELEDGRRSRKKHEETKPNPKLLVQVKAHQLDSSLH 120
           IK+L+ ++EKLKEK+EKLMG         G +S    E      +++VQV+AH + SSL 
Sbjct: 61  IKQLKENVEKLKEKREKLMGL--------GEKSTITSEN---KARVIVQVEAHLVGSSLE 120

Query: 121 ILLTTGSDYHSILQQILLLLHDNGTDTLHVNQTRVKHRVFHTIVAKVDGEGMGAE--DGE 180
           ILLTTGSDYH +L+QI+ LL +NGT+ + +NQ+ V +R FH I+A++ GEG   E   GE
Sbjct: 121 ILLTTGSDYHLVLRQIIQLLQENGTEIVDINQSTVANRAFHKIIAQMAGEGTTLEGAKGE 180

Query: 181 RICETVKNLVSEYRDGECTL 198
           RICE VK  VS Y+D + T+
Sbjct: 181 RICERVKKFVSHYKDDQYTV 189

[Close]

BLAST of CcUC05G106230 vs. TAIR 10
Match: AT4G20970.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 82.8 bits (203), Expect = 3.4e-16
Identity = 55/179 (30.73%), Postives = 95/179 (53.07%), Query Frame = 0


Query: 11  SSQTDQKLIETNRRKEMRELLSKFNSLVPHESSKEARTVVDEVEDVTNYIKELQNHIEKL 70
           S   D+K +E NRR +M+ L S+  SL+PH SS E  T+ D++++  NYIK+LQ ++EK 
Sbjct: 11  SRSVDRKTVEKNRRMQMKSLYSELISLLPHHSSTEPLTLPDQLDEAANYIKKLQVNVEKK 70

Query: 71  KEKKEKLMGKYKMVELEDGRRSRKKHEETKPNPKLLVQVKAHQLDSSLHILLTTGSDYHS 130
           +E+K  L+    + +L     S          P+ L +++  +  S  HI L T  ++  
Sbjct: 71  RERKRNLVATTTLEKLNSVGSSSVSSSVDVSVPRKLPKIEIQETGSIFHIFLVTSLEHKF 130

Query: 131 ILQQIL-LLLHDNGTDTLHVNQTRVKHRVFHTIVAKVDGEGMGAEDGERICETVKNLVS 189
           +  +I+ +L  + G +  H   + V   VFHT+  KV+    GA    +I E ++ +V+
Sbjct: 131 MFCEIIRVLTEELGAEITHAGYSIVDDAVFHTLHCKVEEHDYGAR--SQIPERLEKIVN 187

The following BLAST results are available for this feature:

BLAST of CcUC05G106230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442634.2	5.3e-56	61.62	PREDICTED: transcription factor bHLH118-like [Cucumis melo]	[more]
XP_004146605.1	5.5e-53	60.91	transcription factor bHLH162 isoform X1 [Cucumis sativus] >KGN64684.1 hypothetic...	[more]
XP_038876951.1	3.6e-52	59.80	transcription factor bHLH162-like [Benincasa hispida] >XP_038876952.1 transcript...	[more]
XP_023542777.1	8.9e-43	55.38	uncharacterized protein LOC111802586 [Cucurbita pepo subsp. pepo]	[more]
KAG6573268.1	2.0e-42	54.87	Transcription factor basic helix-loop-helix 162, partial [Cucurbita argyrosperma...	[more]

BLAST of CcUC05G106230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JIJ7	4.8e-15	30.73	Transcription factor bHLH162 OS=Arabidopsis thaliana OX=3702 GN=BHLH162 PE=1 SV=...	[more]

BLAST of CcUC05G106230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B660	2.6e-56	61.62	transcription factor bHLH118-like OS=Cucumis melo OX=3656 GN=LOC103486444 PE=4 S...	[more]
A0A0A0LUL3	2.7e-53	60.91	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G074400 PE=4 S...	[more]
A0A6J1K2Y3	2.8e-42	53.33	transcription factor bHLH167-like OS=Cucurbita maxima OX=3661 GN=LOC111490185 PE...	[more]
A0A6J1GT92	1.2e-40	53.85	uncharacterized protein LOC111457229 OS=Cucurbita moschata OX=3662 GN=LOC1114572...	[more]
A0A6J1K483	2.2e-39	49.50	transcription factor bHLH162-like OS=Cucurbita maxima OX=3661 GN=LOC111489936 PE...	[more]

BLAST of CcUC05G106230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G20970.1	3.4e-16	30.73	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 53..87
None	No IPR available	PANTHER	PTHR13935:SF90	TRANSCRIPTION FACTOR BHLH162	coord: 11..188
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 8..79 e-value: 1.1E-6 score: 30.4
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 17..83
IPR015660	Achaete-scute transcription factor-related	PANTHER	PTHR13935	ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED	coord: 11..188
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 11..63 score: 8.936912

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC05G106230.1	CcUC05G106230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006413	translational initiation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0090575	RNA polymerase II transcription regulator complex
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity