Homology
BLAST of CcUC02G024820 vs. NCBI nr
Match:
YP_009724461.1 (hypothetical chloroplast RF21 [Senegalia senegal] >YP_009724480.1 hypothetical chloroplast RF21 [Senegalia senegal] >QGT77097.1 hypothetical chloroplast RF21 [Senegalia senegal] >QGT77116.1 hypothetical chloroplast RF21 [Senegalia senegal])
HSP 1 Score: 66.6 bits (161), Expect = 1.8e-07
Identity = 35/58 (60.34%), Postives = 43/58 (74.14%), Query Frame = 0
Query: 65 SKGKRIPNLDLISIIPNPINRIAFSRNTRHLSHTSKEKICGLRFGSYRVFIFEGEIWY 123
SK K + +DLISIIPNPINRIAFSRNTRHLSHTSK +R +++++E EI Y
Sbjct: 1446 SKKKYLNLIDLISIIPNPINRIAFSRNTRHLSHTSKAIYSLIR--KRKIYLYEEEIMY 1501
BLAST of CcUC02G024820 vs. NCBI nr
Match:
YP_009370624.1 (hypothetical chloroplast RF21 [Adoxa moschatellina] >YP_009370639.1 hypothetical chloroplast RF21 [Adoxa moschatellina] >API68326.1 hypothetical chloroplast RF21 [Adoxa moschatellina] >API68341.1 hypothetical chloroplast RF21 [Adoxa moschatellina])
HSP 1 Score: 62.4 bits (150), Expect = 3.4e-06
Identity = 29/34 (85.29%), Postives = 31/34 (91.18%), Query Frame = 0
Query: 68 KRIPNLDLISIIPNPINRIAFSRNTRHLSHTSKE 102
K+ N+DLISIIPNPINRI FSRNTRHLSHTSKE
Sbjct: 1460 KKYLNIDLISIIPNPINRITFSRNTRHLSHTSKE 1493
BLAST of CcUC02G024820 vs. NCBI nr
Match:
YP_009326561.1 (hypothetical chloroplast RF21 [Sinadoxa corydalifolia] >YP_009326577.1 hypothetical chloroplast RF21 [Sinadoxa corydalifolia] >APD52611.1 hypothetical chloroplast RF21 [Sinadoxa corydalifolia] >APD52627.1 hypothetical chloroplast RF21 [Sinadoxa corydalifolia])
HSP 1 Score: 62.4 bits (150), Expect = 3.4e-06
Identity = 29/34 (85.29%), Postives = 31/34 (91.18%), Query Frame = 0
Query: 68 KRIPNLDLISIIPNPINRIAFSRNTRHLSHTSKE 102
K+ N+DLISIIPNPINRI FSRNTRHLSHTSKE
Sbjct: 1468 KKYLNIDLISIIPNPINRITFSRNTRHLSHTSKE 1501
BLAST of CcUC02G024820 vs. NCBI nr
Match:
YP_009370705.1 (hypothetical chloroplast RF21 [Tetradoxa omeiensis] >YP_009370721.1 hypothetical chloroplast RF21 [Tetradoxa omeiensis] >API68407.1 hypothetical chloroplast RF21 [Tetradoxa omeiensis] >API68422.1 hypothetical chloroplast RF21 [Tetradoxa omeiensis])
HSP 1 Score: 62.4 bits (150), Expect = 3.4e-06
Identity = 29/34 (85.29%), Postives = 31/34 (91.18%), Query Frame = 0
Query: 68 KRIPNLDLISIIPNPINRIAFSRNTRHLSHTSKE 102
K+ N+DLISIIPNPINRI FSRNTRHLSHTSKE
Sbjct: 1460 KKYLNIDLISIIPNPINRITFSRNTRHLSHTSKE 1493
BLAST of CcUC02G024820 vs. NCBI nr
Match:
YP_009764609.1 (hypothetical chloroplast RF21 [Amorpha fruticosa] >YP_009764626.1 Ycf2 [Amorpha fruticosa] >QVX28345.1 hypothetical protein RF2 [Amorpha roemeriana] >QIS94886.1 hypothetical chloroplast RF21 [Amorpha fruticosa] >QIS94903.1 Ycf2 [Amorpha fruticosa] >QVX28362.1 hypothetical protein RF2 [Amorpha roemeriana])
HSP 1 Score: 62.4 bits (150), Expect = 3.4e-06
Identity = 30/36 (83.33%), Postives = 32/36 (88.89%), Query Frame = 0
Query: 65 SKGKRIPNLDLISIIPNPINRIAFSRNTRHLSHTSK 101
SK K + +DLISIIPNPINRIAFSRNTRHLSHTSK
Sbjct: 1447 SKNKYLNLIDLISIIPNPINRIAFSRNTRHLSHTSK 1482
BLAST of CcUC02G024820 vs. ExPASy Swiss-Prot
Match:
A4QLE9 (Protein Ycf2 OS=Lepidium virginicum OX=59292 GN=ycf2-A PE=3 SV=1)
HSP 1 Score: 61.2 bits (147), Expect = 9.9e-09
Identity = 31/46 (67.39%), Postives = 35/46 (76.09%), Query Frame = 0
Query: 63 DPSKGKR-------IPNLDLISIIPNPINRIAFSRNTRHLSHTSKE 102
DP++ K+ I +DLISIIPNPINRI FSRNTRHLSHTSKE
Sbjct: 1444 DPARSKKKDLKINFIDIIDLISIIPNPINRITFSRNTRHLSHTSKE 1489
BLAST of CcUC02G024820 vs. ExPASy Swiss-Prot
Match:
A4QKE8 (Protein Ycf2 OS=Barbarea verna OX=50458 GN=ycf2-A PE=3 SV=1)
HSP 1 Score: 59.7 bits (143), Expect = 2.9e-08
Identity = 28/36 (77.78%), Postives = 31/36 (86.11%), Query Frame = 0
Query: 66 KGKRIPNLDLISIIPNPINRIAFSRNTRHLSHTSKE 102
K +I +D+ISIIPNPINRI FSRNTRHLSHTSKE
Sbjct: 1457 KDLKINFIDIISIIPNPINRITFSRNTRHLSHTSKE 1492
BLAST of CcUC02G024820 vs. ExPASy Swiss-Prot
Match:
P08973 (Protein Ycf2 OS=Spinacia oleracea OX=3562 GN=ycf2-A PE=3 SV=2)
HSP 1 Score: 59.7 bits (143), Expect = 2.9e-08
Identity = 28/29 (96.55%), Postives = 28/29 (96.55%), Query Frame = 0
Query: 73 LDLISIIPNPINRIAFSRNTRHLSHTSKE 102
LDLISIIPNPINRI FSRNTRHLSHTSKE
Sbjct: 1304 LDLISIIPNPINRITFSRNTRHLSHTSKE 1332
BLAST of CcUC02G024820 vs. ExPASy Swiss-Prot
Match:
Q9B1K6 (Protein Ycf2 OS=Lotus japonicus OX=34305 GN=ycf2-A PE=3 SV=1)
HSP 1 Score: 59.3 bits (142), Expect = 3.8e-08
Identity = 29/36 (80.56%), Postives = 31/36 (86.11%), Query Frame = 0
Query: 65 SKGKRIPNLDLISIIPNPINRIAFSRNTRHLSHTSK 101
SK K + +DLISIIPNPINRIAFSRN RHLSHTSK
Sbjct: 1449 SKKKYLNLIDLISIIPNPINRIAFSRNMRHLSHTSK 1484
BLAST of CcUC02G024820 vs. ExPASy Swiss-Prot
Match:
Q2PMM5 (Protein Ycf2 OS=Glycine max OX=3847 GN=ycf2-A PE=3 SV=1)
HSP 1 Score: 59.3 bits (142), Expect = 3.8e-08
Identity = 29/36 (80.56%), Postives = 31/36 (86.11%), Query Frame = 0
Query: 65 SKGKRIPNLDLISIIPNPINRIAFSRNTRHLSHTSK 101
SK K + +DLISIIPNPINRIAFSRNTRHLSH SK
Sbjct: 1449 SKKKYLNLIDLISIIPNPINRIAFSRNTRHLSHPSK 1484
BLAST of CcUC02G024820 vs. ExPASy TrEMBL
Match:
A0A650F3Z0 (Protein Ycf2 OS=Senegalia senegal OX=138043 GN=ycf2 PE=3 SV=1)
HSP 1 Score: 66.6 bits (161), Expect = 8.7e-08
Identity = 35/58 (60.34%), Postives = 43/58 (74.14%), Query Frame = 0
Query: 65 SKGKRIPNLDLISIIPNPINRIAFSRNTRHLSHTSKEKICGLRFGSYRVFIFEGEIWY 123
SK K + +DLISIIPNPINRIAFSRNTRHLSHTSK +R +++++E EI Y
Sbjct: 1446 SKKKYLNLIDLISIIPNPINRIAFSRNTRHLSHTSKAIYSLIR--KRKIYLYEEEIMY 1501
BLAST of CcUC02G024820 vs. ExPASy TrEMBL
Match:
A0A1J0PLB6 (Protein Ycf2 OS=Sinadoxa corydalifolia OX=122250 GN=ycf2 PE=3 SV=1)
HSP 1 Score: 62.4 bits (150), Expect = 1.6e-06
Identity = 29/34 (85.29%), Postives = 31/34 (91.18%), Query Frame = 0
Query: 68 KRIPNLDLISIIPNPINRIAFSRNTRHLSHTSKE 102
K+ N+DLISIIPNPINRI FSRNTRHLSHTSKE
Sbjct: 1468 KKYLNIDLISIIPNPINRITFSRNTRHLSHTSKE 1501
BLAST of CcUC02G024820 vs. ExPASy TrEMBL
Match:
A0A1W5PW46 (Protein Ycf2 OS=Tetradoxa omeiensis OX=179091 GN=ycf2 PE=3 SV=1)
HSP 1 Score: 62.4 bits (150), Expect = 1.6e-06
Identity = 29/34 (85.29%), Postives = 31/34 (91.18%), Query Frame = 0
Query: 68 KRIPNLDLISIIPNPINRIAFSRNTRHLSHTSKE 102
K+ N+DLISIIPNPINRI FSRNTRHLSHTSKE
Sbjct: 1460 KKYLNIDLISIIPNPINRITFSRNTRHLSHTSKE 1493
BLAST of CcUC02G024820 vs. ExPASy TrEMBL
Match:
A0A1W5PXL8 (Protein Ycf2 OS=Adoxa moschatellina OX=4208 GN=ycf2 PE=3 SV=1)
HSP 1 Score: 62.4 bits (150), Expect = 1.6e-06
Identity = 29/34 (85.29%), Postives = 31/34 (91.18%), Query Frame = 0
Query: 68 KRIPNLDLISIIPNPINRIAFSRNTRHLSHTSKE 102
K+ N+DLISIIPNPINRI FSRNTRHLSHTSKE
Sbjct: 1460 KKYLNIDLISIIPNPINRITFSRNTRHLSHTSKE 1493
BLAST of CcUC02G024820 vs. ExPASy TrEMBL
Match:
A0A6H0DZB2 (Protein Ycf2 OS=Amorpha fruticosa OX=48131 GN=ycf2 PE=3 SV=1)
HSP 1 Score: 62.4 bits (150), Expect = 1.6e-06
Identity = 30/36 (83.33%), Postives = 32/36 (88.89%), Query Frame = 0
Query: 65 SKGKRIPNLDLISIIPNPINRIAFSRNTRHLSHTSK 101
SK K + +DLISIIPNPINRIAFSRNTRHLSHTSK
Sbjct: 1447 SKNKYLNLIDLISIIPNPINRIAFSRNTRHLSHTSK 1482
BLAST of CcUC02G024820 vs. TAIR 10
Match:
ATCG00860.1 (Chloroplast Ycf2;ATPase, AAA type, core )
HSP 1 Score: 58.9 bits (141), Expect = 3.5e-09
Identity = 27/29 (93.10%), Postives = 28/29 (96.55%), Query Frame = 0
Query: 73 LDLISIIPNPINRIAFSRNTRHLSHTSKE 102
+DLISIIPNPINRI FSRNTRHLSHTSKE
Sbjct: 1468 IDLISIIPNPINRITFSRNTRHLSHTSKE 1496
BLAST of CcUC02G024820 vs. TAIR 10
Match:
ATCG01280.1 (Chloroplast Ycf2;ATPase, AAA type, core )
HSP 1 Score: 58.9 bits (141), Expect = 3.5e-09
Identity = 27/29 (93.10%), Postives = 28/29 (96.55%), Query Frame = 0
Query: 73 LDLISIIPNPINRIAFSRNTRHLSHTSKE 102
+DLISIIPNPINRI FSRNTRHLSHTSKE
Sbjct: 1468 IDLISIIPNPINRITFSRNTRHLSHTSKE 1496
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| YP_009724461.1 | 1.8e-07 | 60.34 | hypothetical chloroplast RF21 [Senegalia senegal] >YP_009724480.1 hypothetical c... | [more] |
| YP_009370624.1 | 3.4e-06 | 85.29 | hypothetical chloroplast RF21 [Adoxa moschatellina] >YP_009370639.1 hypothetical... | [more] |
| YP_009326561.1 | 3.4e-06 | 85.29 | hypothetical chloroplast RF21 [Sinadoxa corydalifolia] >YP_009326577.1 hypotheti... | [more] |
| YP_009370705.1 | 3.4e-06 | 85.29 | hypothetical chloroplast RF21 [Tetradoxa omeiensis] >YP_009370721.1 hypothetical... | [more] |
| YP_009764609.1 | 3.4e-06 | 83.33 | hypothetical chloroplast RF21 [Amorpha fruticosa] >YP_009764626.1 Ycf2 [Amorpha ... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A4QLE9 | 9.9e-09 | 67.39 | Protein Ycf2 OS=Lepidium virginicum OX=59292 GN=ycf2-A PE=3 SV=1 | [more] |
| A4QKE8 | 2.9e-08 | 77.78 | Protein Ycf2 OS=Barbarea verna OX=50458 GN=ycf2-A PE=3 SV=1 | [more] |
| P08973 | 2.9e-08 | 96.55 | Protein Ycf2 OS=Spinacia oleracea OX=3562 GN=ycf2-A PE=3 SV=2 | [more] |
| Q9B1K6 | 3.8e-08 | 80.56 | Protein Ycf2 OS=Lotus japonicus OX=34305 GN=ycf2-A PE=3 SV=1 | [more] |
| Q2PMM5 | 3.8e-08 | 80.56 | Protein Ycf2 OS=Glycine max OX=3847 GN=ycf2-A PE=3 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A650F3Z0 | 8.7e-08 | 60.34 | Protein Ycf2 OS=Senegalia senegal OX=138043 GN=ycf2 PE=3 SV=1 | [more] |
| A0A1J0PLB6 | 1.6e-06 | 85.29 | Protein Ycf2 OS=Sinadoxa corydalifolia OX=122250 GN=ycf2 PE=3 SV=1 | [more] |
| A0A1W5PW46 | 1.6e-06 | 85.29 | Protein Ycf2 OS=Tetradoxa omeiensis OX=179091 GN=ycf2 PE=3 SV=1 | [more] |
| A0A1W5PXL8 | 1.6e-06 | 85.29 | Protein Ycf2 OS=Adoxa moschatellina OX=4208 GN=ycf2 PE=3 SV=1 | [more] |
| A0A6H0DZB2 | 1.6e-06 | 83.33 | Protein Ycf2 OS=Amorpha fruticosa OX=48131 GN=ycf2 PE=3 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| ATCG00860.1 | 3.5e-09 | 93.10 | Chloroplast Ycf2;ATPase, AAA type, core | [more] |
| ATCG01280.1 | 3.5e-09 | 93.10 | Chloroplast Ycf2;ATPase, AAA type, core | [more] |
