CcUC01G003550 (gene) Watermelon (PI 537277) v1

InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Position :
0
Zoom :
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ATGGAATTAGAATGTATTGAATTTCCATTCCCATTTGATCAAGCAGATGAATTATTTCCACTTCCTTCCCTTACCCCTATAGACCTTTCTGTTTCTCAGCCTCCATTGATCTGTTCCAAGAACAAGAATGACAAAAATGCCTCCGAAAAGCCCAAAAATAATCGTCGGCGAAAGTCTCCGAACACTTCCGATGATATCGAAGACGAGAACCCGAACGAACACAAAAAAAAGAAGATCATCCACAGAGATGTTGAACGCCAAAGAAGGCAAGAAATGTCCACTCTTTACTCCACTCTTCGTTCACTTCTCCCGCTTGAATATCTTAAGGGGAAGCGATCAATATGTGATCACATGCATGAAACAGTGAAGTACATACAACATATGCAAAGCAAGATTCAAAAGCTAAGGAACAAGAGAGATGAGCTGAAAAAGGACATTGAGGATGGTTCAAACATTAGTACAATCGAAACATTAAACTCCTCAAAAAGGGATTGTGTAGTAGTAAAGCCAAGATCGGGAGGATTTCAAATTCTTCTAGACACAGCCACTCAACGTAGGCTCCCACTTTCAAATCTTCTAAAATTTCTACTTACGGAAAGACTTGAAATCATTGGTTGTCACTCTACTAAGATAAACGACAGATTCCTCCACACTATTGAATTTGAAGTCGTCGATACTAGAACTATCGATGTGTCGGAACTCCAACATAAATTGACCAATTTGGAATATTTTCCATTAGATTAA100200300400500600700Score = Score = Score = Score = Expect = 2.90086E-27 / Score = 98.1443Expect = 6.5E-5 / Score = 32.3Expect = 3.3E-9 / Score = 36.6Score = 13.172961Expect = 9.1E-13 / Score = 50.0Score = Score = SequenceCoilmobidb-litemobidb-litePTHR13935:SF110cd18914SM00353PF00010PS50888G3DSA:4.10.280.10SSF47459PTHR13935
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 125..152
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..82
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..82
NoneNo IPR availablePANTHERPTHR13935:SF110HELIX-LOOP-HELIX DNA-BINDING SUPERFAMILY PROTEIN, PUTATIVE-RELATEDcoord: 33..241
NoneNo IPR availableCDDcd18914bHLH_AtORG2_likecoord: 77..151
e-value: 2.90086E-27
score: 98.1443
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 82..134
e-value: 6.5E-5
score: 32.3
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 78..129
e-value: 3.3E-9
score: 36.6
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 76..128
score: 13.172961
IPR036638Helix-loop-helix DNA-binding domain superfamilyGENE3D4.10.280.10coord: 66..157
e-value: 9.1E-13
score: 50.0
IPR036638Helix-loop-helix DNA-binding domain superfamilySUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 74..146
IPR015660Achaete-scute transcription factor-relatedPANTHERPTHR13935ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATEDcoord: 33..241