CcUC01G003550.1 (mRNA) Watermelon (PI 537277) v1

Overview


Name	CcUC01G003550.1
Type	mRNA
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	BHLH transcription factor
Location	CicolChr01: 3543406 .. 3544987 (-)
Sequence length	744
RNA-Seq Expression	CcUC01G003550.1
Synteny	CcUC01G003550.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATTAGAATGTATTGAATTTCCATTCCCATTTGATCAAGCAGATGAATTATTTCCACTTCCTTCCCTTACCCCTATAGACCTTTCTGTTTCTCAGCCTCCATTGATCTGTTCCAAGAACAAGAATGACAAAAATGCCTCCGAAAAGCCCAAAAATAATCGTCGGCGAAAGTCTCCGAACACTTCCGATGATATCGAAGACGAGAACCCGAACGAACACAAAAAAAAGAAGATCATCCACAGAGATGTTGAACGCCAAAGAAGGCAAGAAATGTCCACTCTTTACTCCACTCTTCGTTCACTTCTCCCGCTTGAATATCTTAAGGTAACACTCATAAAGCATCAATTTTTTTCCTTTACAAAATAATTTGTCTTTGAAGTATTTTTTTAAAAAGCAGAATTATGTTCAAATTAACTTTAAAACGTATATTTGAGCTCATAATTTTTTATTTTATAAAAATAAGAAATATGATCTTTTTCCCCATTGAGTTCCAAGTATTAGGTATTTGTTTAGCAAGATGTCAAAATGAATTCTTTTAGTTTCTAAATTTTAAAAATAGGTTGAACAAGTTTTTCAGTAATTTTTTATTGCTATTTTAATTATTGGCACGCCATTTTAAATTAAAAATAATAATTAAATAAGAGGATTGAAGGAGAGAGAGAAAAGGTAAGTTTTCTTAATTATTATTATTTTTTTAATTTTAAAATAATAAAATAATTACTACCTAATTCTAAACTTGTTCTAAAAAATTGGAAGTTTTGACACCTTATGTACCTGCGGATGAAAATTGAAAGACTTAAAGGGTCAGTCTATCTTCAAGGCCATCGTGACACTCTTAGAACATCAAATGTATTTTTGGGATTGAATGTATAATTGAGCTCATAAATCCTTTTAAAGAAAAATAATAAATATGATTCTTTTTAACAAGATACTAGAGGATTTTGAGATCAATAAATGCATTAAGATATCTTAACTAGTTGATACATCCATAGATTTAAAGTAATAAAATTAAATAGAATTATTTTTAGTCATTGAGTTTTCAATATTGGATACATTCAGTCTCTAAGATTTGAATAAAAAGTCTTTTTAATTTCAGAATCTTAAAATTCAGATCAAATGTATAAATCATTTTTTAATTTAAATTTTGTTAATGAAATTACAGGGGAAGCGATCAATATGTGATCACATGCATGAAACAGTGAAGTACATACAACATATGCAAAGCAAGATTCAAAAGCTAAGGAACAAGAGAGATGAGCTGAAAAAGGACATTGAGGATGGTTCAAACATTAGTACAATCGAAACATTAAACTCCTCAAAAAGGGATTGTGTAGTAGTAAAGCCAAGATCGGGAGGATTTCAAATTCTTCTAGACACAGCCACTCAACGTAGGCTCCCACTTTCAAATCTTCTAAAATTTCTACTTACGGAAAGACTTGAAATCATTGGTTGTCACTCTACTAAGATAAACGACAGATTCCTCCACACTATTGAATTTGAAGTCGTCGATACTAGAACTATCGATGTGTCGGAACTCCAACATAAATTGACCAATTTGGAATATTTTCCATTAGATTAA

mRNA sequence

ATGGAATTAGAATGTATTGAATTTCCATTCCCATTTGATCAAGCAGATGAATTATTTCCACTTCCTTCCCTTACCCCTATAGACCTTTCTGTTTCTCAGCCTCCATTGATCTGTTCCAAGAACAAGAATGACAAAAATGCCTCCGAAAAGCCCAAAAATAATCGTCGGCGAAAGTCTCCGAACACTTCCGATGATATCGAAGACGAGAACCCGAACGAACACAAAAAAAAGAAGATCATCCACAGAGATGTTGAACGCCAAAGAAGGCAAGAAATGTCCACTCTTTACTCCACTCTTCGTTCACTTCTCCCGCTTGAATATCTTAAGGGGAAGCGATCAATATGTGATCACATGCATGAAACAGTGAAGTACATACAACATATGCAAAGCAAGATTCAAAAGCTAAGGAACAAGAGAGATGAGCTGAAAAAGGACATTGAGGATGGTTCAAACATTAGTACAATCGAAACATTAAACTCCTCAAAAAGGGATTGTGTAGTAGTAAAGCCAAGATCGGGAGGATTTCAAATTCTTCTAGACACAGCCACTCAACGTAGGCTCCCACTTTCAAATCTTCTAAAATTTCTACTTACGGAAAGACTTGAAATCATTGGTTGTCACTCTACTAAGATAAACGACAGATTCCTCCACACTATTGAATTTGAAGTCGTCGATACTAGAACTATCGATGTGTCGGAACTCCAACATAAATTGACCAATTTGGAATATTTTCCATTAGATTAA

Coding sequence (CDS)

ATGGAATTAGAATGTATTGAATTTCCATTCCCATTTGATCAAGCAGATGAATTATTTCCACTTCCTTCCCTTACCCCTATAGACCTTTCTGTTTCTCAGCCTCCATTGATCTGTTCCAAGAACAAGAATGACAAAAATGCCTCCGAAAAGCCCAAAAATAATCGTCGGCGAAAGTCTCCGAACACTTCCGATGATATCGAAGACGAGAACCCGAACGAACACAAAAAAAAGAAGATCATCCACAGAGATGTTGAACGCCAAAGAAGGCAAGAAATGTCCACTCTTTACTCCACTCTTCGTTCACTTCTCCCGCTTGAATATCTTAAGGGGAAGCGATCAATATGTGATCACATGCATGAAACAGTGAAGTACATACAACATATGCAAAGCAAGATTCAAAAGCTAAGGAACAAGAGAGATGAGCTGAAAAAGGACATTGAGGATGGTTCAAACATTAGTACAATCGAAACATTAAACTCCTCAAAAAGGGATTGTGTAGTAGTAAAGCCAAGATCGGGAGGATTTCAAATTCTTCTAGACACAGCCACTCAACGTAGGCTCCCACTTTCAAATCTTCTAAAATTTCTACTTACGGAAAGACTTGAAATCATTGGTTGTCACTCTACTAAGATAAACGACAGATTCCTCCACACTATTGAATTTGAAGTCGTCGATACTAGAACTATCGATGTGTCGGAACTCCAACATAAATTGACCAATTTGGAATATTTTCCATTAGATTAA

Protein sequence

MELECIEFPFPFDQADELFPLPSLTPIDLSVSQPPLICSKNKNDKNASEKPKNNRRRKSPNTSDDIEDENPNEHKKKKIIHRDVERQRRQEMSTLYSTLRSLLPLEYLKGKRSICDHMHETVKYIQHMQSKIQKLRNKRDELKKDIEDGSNISTIETLNSSKRDCVVVKPRSGGFQILLDTATQRRLPLSNLLKFLLTERLEIIGCHSTKINDRFLHTIEFEVVDTRTIDVSELQHKLTNLEYFPLD

Homology

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BLAST of CcUC01G003550.1 vs. NCBI nr
Match: XP_038876288.1 (transcription factor bHLH120-like [Benincasa hispida])

HSP 1 Score: 390.2 bits (1001), Expect = 1.3e-104
Identity = 206/244 (84.43%), Postives = 224/244 (91.80%), Query Frame = 0


Query: 6   IEFPFPFDQADELFPLPSLTPIDLSVSQPPLICSKNKNDKNASEKPKNNRRRKSPNTSDD 65
           +EFPFPFDQADELFPLP+L+PIDLSV Q  LI SKNK +KN SEKPK +R+RKSPN SDD
Sbjct: 1   MEFPFPFDQADELFPLPALSPIDLSVPQSSLIPSKNKTNKNISEKPKGSRQRKSPNASDD 60

Query: 66  IEDENPNEHKKKKIIHRDVERQRRQEMSTLYSTLRSLLPLEYLKGKRSICDHMHETVKYI 125
           I+DENP+EHKKKKIIHRDVERQRRQEMSTLY+TLRSLLP+EYLKGKRSICDHMHETVKYI
Sbjct: 61  IDDENPSEHKKKKIIHRDVERQRRQEMSTLYATLRSLLPVEYLKGKRSICDHMHETVKYI 120

Query: 126 QHMQSKIQKLRNKRDELKKDIEDGSNISTIETLNSSKRDCVVVKPRSGGFQILLDTATQR 185
           +HMQSKIQKL  KRDELKKDIED SNISTIETLNSSKRD VVVKPR GGFQILLDTATQ 
Sbjct: 121 EHMQSKIQKLTKKRDELKKDIEDDSNISTIETLNSSKRDSVVVKPRHGGFQILLDTATQH 180

Query: 186 RLPLSNLLKFLLT-ERLEIIGCHSTKINDRFLHTIEFE-VVDTRTIDVSELQHKLTNLEY 245
           RLPLSNL+KFL+T +RL+I+ CHSTKINDRFLHTIE E +V+  TIDVSELQHKLTNLEY
Sbjct: 181 RLPLSNLIKFLITDQRLQIVSCHSTKINDRFLHTIESEALVNIGTIDVSELQHKLTNLEY 240

Query: 246 FPLD 248
           FPLD
Sbjct: 241 FPLD 244

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BLAST of CcUC01G003550.1 vs. NCBI nr
Match: KGN50164.1 (hypothetical protein Csa_000575 [Cucumis sativus])

HSP 1 Score: 366.7 bits (940), Expect = 1.6e-97
Identity = 200/255 (78.43%), Postives = 220/255 (86.27%), Query Frame = 0


Query: 1   MELECIEFPFPFDQADELFPLPSLTPIDLSVS-QPPLICSKNKNDKNASEKPKNNRRRKS 60
           M+L+CI+ PFPFDQ DELFPLPSL+PI LSV+  PPLI S N  ++N SEKPK  RRRKS
Sbjct: 1   MDLDCIQSPFPFDQVDELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRKS 60

Query: 61  PNTSDDIEDE--NPNEHKKKKIIHRDVERQRRQEMSTLYSTLRSLLPLEYLKGKRSICDH 120
           PNTS DIEDE  NPNEHKKKKIIHRDVERQRRQEMSTLY+ LRSLLP+EYLKGKRSICDH
Sbjct: 61  PNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICDH 120

Query: 121 MHETVKYIQHMQSKIQKLRNKRDELKKDIEDGS---NISTIETLNSSKRDCVVVKPRS-G 180
           MHETVKYIQHMQ+KIQ LRNKRDELKK+IEDG    NI+TIETLNSSKRD V+V PRS G
Sbjct: 121 MHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSRNITTIETLNSSKRDSVLVMPRSCG 180

Query: 181 GFQILLDTATQRRLPLSNLLKFLLTERLEIIGCHSTKINDRFLHTIEFE-VVDTRTIDVS 240
           G QILLDTAT  RLPLSNL+KFL+T+ L+II CHST+ NDRFLHTIE E  VD  TID+S
Sbjct: 181 GVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIESEAAVDVETIDMS 240

Query: 241 ELQHKLTNLEYFPLD 248
           ELQ+KLTNLEYFPLD
Sbjct: 241 ELQNKLTNLEYFPLD 255

[Close]

BLAST of CcUC01G003550.1 vs. NCBI nr
Match: NP_001295841.1 (transcription factor bHLH118-like [Cucumis sativus] >AIT72027.1 bHLH transcription factor [Cucumis sativus])

HSP 1 Score: 366.7 bits (940), Expect = 1.6e-97
Identity = 200/255 (78.43%), Postives = 220/255 (86.27%), Query Frame = 0


Query: 1   MELECIEFPFPFDQADELFPLPSLTPIDLSVS-QPPLICSKNKNDKNASEKPKNNRRRKS 60
           M+L+CI+ PFPFDQ DELFPLPSL+PI LSV+  PPLI S N  ++N SEKPK  RRRKS
Sbjct: 1   MDLDCIQSPFPFDQVDELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRKS 60

Query: 61  PNTSDDIEDE--NPNEHKKKKIIHRDVERQRRQEMSTLYSTLRSLLPLEYLKGKRSICDH 120
           PNTS DIEDE  NPNEHKKKKIIHRDVERQRRQEMSTLY+ LRSLLP+EYLKGKRSICDH
Sbjct: 61  PNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICDH 120

Query: 121 MHETVKYIQHMQSKIQKLRNKRDELKKDIEDG---SNISTIETLNSSKRDCVVVKPRS-G 180
           MHETVKYIQHMQ+KIQ LRNKRDELKK+IEDG    NI+TIETLNSSKRD V+V PRS G
Sbjct: 121 MHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSGNITTIETLNSSKRDSVLVMPRSCG 180

Query: 181 GFQILLDTATQRRLPLSNLLKFLLTERLEIIGCHSTKINDRFLHTIEFE-VVDTRTIDVS 240
           G QILLDTAT  RLPLSNL+KFL+T+ L+II CHST+ NDRFLHTIE E  VD  TID+S
Sbjct: 181 GVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIETEAAVDVETIDMS 240

Query: 241 ELQHKLTNLEYFPLD 248
           ELQ+KLTNLEYFPLD
Sbjct: 241 ELQNKLTNLEYFPLD 255

[Close]

BLAST of CcUC01G003550.1 vs. NCBI nr
Match: KAG6579461.1 (Transcription factor basic helix-loop-helix 120, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 308.9 bits (790), Expect = 3.9e-80
Identity = 165/243 (67.90%), Postives = 192/243 (79.01%), Query Frame = 0


Query: 1   MELECIEFPFPFDQADELFPLPSLTPIDLSVSQPPLICSKNKNDKNASEKPKNNRRRKSP 60
           MELE ++ PFPFDQ DELFPLPSL+  D  +  PP I  K+KND + ++ PKN RRRKSP
Sbjct: 1   MELEGVDSPFPFDQVDELFPLPSLSSFDHPLPHPPFISPKDKNDNDLTQIPKNGRRRKSP 60

Query: 61  NTSDDIEDENPNEHKKKKIIHRDVERQRRQEMSTLYSTLRSLLPLEYLKGKRSICDHMHE 120
           +T DDI      EHKKKKIIHRDVERQRRQEMSTL + LRSLLPLE LKGKRSICDHM E
Sbjct: 61  DTPDDI------EHKKKKIIHRDVERQRRQEMSTLNAALRSLLPLENLKGKRSICDHMQE 120

Query: 121 TVKYIQHMQSKIQKLRNKRDELKKDIEDGSNISTIETLNSSKRDCVVVKPRSGGFQILLD 180
           TVKYIQ+MQ+KIQ L NKRDELK   +D SN  T+ETL SSK+D VVVKPR GGFQ+++D
Sbjct: 121 TVKYIQNMQAKIQMLTNKRDELKSLFKDDSNTRTVETLQSSKKDFVVVKPRLGGFQVVVD 180

Query: 181 TATQRRLPLSNLLKFLLTERLEIIGCHSTKINDRFLHTIEFEVVDTRTIDVSELQHKLTN 240
           TATQ   PLS +LK LLT+ L+II C +TKIN R+LHTIEFE V+  TID SE++HKLTN
Sbjct: 181 TATQHSFPLSMILKSLLTQNLDIISCITTKINSRYLHTIEFEAVNVGTIDTSEIEHKLTN 237

Query: 241 LEY 244
           L+Y
Sbjct: 241 LKY 237

[Close]

BLAST of CcUC01G003550.1 vs. NCBI nr
Match: XP_022156904.1 (transcription factor bHLH118-like [Momordica charantia])

HSP 1 Score: 281.6 bits (719), Expect = 6.7e-72
Identity = 159/244 (65.16%), Postives = 187/244 (76.64%), Query Frame = 0


Query: 6   IEFPFPFDQADELFPLPSLTPIDLSVSQPPLICSKNKNDKNASEKPKNNRRRKSPNTSDD 65
           I+ PF FD  D+LFPLP L+ +D+ + Q P + S+      A+ KPKN RRRK P  S D
Sbjct: 5   IDSPFSFDVVDDLFPLPPLSCMDIPLPQLPSVVSR----PAAALKPKNCRRRKPPPVSSD 64

Query: 66  IEDENPNEHKKKKIIHRDVERQRRQEMSTLYSTLRSLLPLEYLKGKRSICDHMHETVKYI 125
               NPNEHKK+KIIHRDVERQRRQEMSTLY+TLRSLLP EYLKGKRSICDHMHETVKYI
Sbjct: 65  --HSNPNEHKKRKIIHRDVERQRRQEMSTLYATLRSLLPFEYLKGKRSICDHMHETVKYI 124

Query: 126 QHMQSKIQKLRNKRDELKKDIEDGSNISTIETLNSSKRDCVVVKPRSGGFQILLDTATQR 185
           +HMQ ++Q+L +KR+ELKK   + S+  T ETL++SKRD V V+PR  G Q++LDT TQ 
Sbjct: 125 RHMQRQVQELSDKREELKKLSGEDSDAGTAETLSASKRDSVAVRPRGEGVQVVLDTGTQH 184

Query: 186 RLPLSNLLKFLLTERLEIIGCHSTKINDRFLHTIEFEVVD--TRTIDVSELQHKLTNLEY 245
           RLP+SN+L+ LL   LEI+GC STKINDRFLHTIE  V D   R IDVSEL HKLTNLEY
Sbjct: 185 RLPVSNILEALLAVGLEIVGCISTKINDRFLHTIE-AVPDGSLRNIDVSELHHKLTNLEY 241

Query: 246 FPLD 248
           FPLD
Sbjct: 245 FPLD 241

[Close]

BLAST of CcUC01G003550.1 vs. ExPASy Swiss-Prot
Match: Q9STJ6 (Transcription factor bHLH126 OS=Arabidopsis thaliana OX=3702 GN=BHLH126 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.9e-25
Identity = 73/207 (35.27%), Postives = 126/207 (60.87%), Query Frame = 0


Query: 40  KNKNDKN-ASEKPKNNRRRKSPNTSDDIEDENPNEHKKKKIIHRDVERQRRQEMSTLYST 99
           KN N K    ++P ++      +       E  +  KKKK++HRD+ERQRRQEM+TL++T
Sbjct: 5   KNLNPKGYQRQRPFSSAGESGGSGGSGTAHETDDNKKKKKLLHRDIERQRRQEMATLFAT 64

Query: 100 LRSLLPLEYLKGKRSICDHMHETVKYIQHMQSKIQKLRNKRDELKKDIEDGSNIS----- 159
           LR+ LPL+Y+KGKR++ DH++  V +I+  +++I++L  +RDEL ++   G   +     
Sbjct: 65  LRTHLPLKYIKGKRAVSDHVNGAVNFIKDTEARIKELSARRDELSRETGQGYKSNPDPGK 124

Query: 160 TIETLNSSKRDCVVVKPRSGGFQILL--DTATQRRLPLSNLLKFLLTERLEIIGCHSTKI 219
           T   +  S+   V+V+P   G ++++  +++    LPLS +L+ +  + LE++   +T++
Sbjct: 125 TGSDVGKSEPATVMVQPHVSGLEVVVSSNSSGPEALPLSKVLETIQEKGLEVMSSFTTRV 184

Query: 220 NDRFLHTIEFEVVDTRTIDVSELQHKL 239
           NDR +HTI+ EV     ID+  LQ KL
Sbjct: 185 NDRLMHTIQVEVNSFGCIDLLWLQQKL 211

[Close]

BLAST of CcUC01G003550.1 vs. ExPASy Swiss-Prot
Match: Q9FLI0 (Transcription factor bHLH120 OS=Arabidopsis thaliana OX=3702 GN=BHLH120 PE=2 SV=2)

HSP 1 Score: 114.8 bits (286), Expect = 1.4e-24
Identity = 71/198 (35.86%), Postives = 122/198 (61.62%), Query Frame = 0


Query: 46  NASEKPKNNRRRKSPNTSDDIEDENPNEHKKKKIIHRDVERQRRQEMSTLYSTLRSLLPL 105
           N S  PK  R +        +  E     K+KK++HR++ERQRRQEM+ L+++LRS LPL
Sbjct: 2   NPSNNPKKTRHQ------SHMPQERDETKKEKKLLHRNIERQRRQEMAILFASLRSQLPL 61

Query: 106 EYLKGKRSICDHMHETVKYIQHMQSKIQKLRNKRDELKKDIEDGSNISTIETLNSSKRD- 165
           +Y+KGKR++ DH++  V +I+  Q++I+ L  +RDELK++I D ++++   + + S R  
Sbjct: 62  KYIKGKRAMSDHVNGAVSFIKDTQTRIKDLSARRDELKREIGDPTSLTGSGSGSGSSRSE 121

Query: 166 --CVVVKPRSGGFQILLDTATQ--RRLPLSNLLKFLLTERLEIIGCHSTKINDRFLHTIE 225
              V+V+P   GF++++ +        PLS +L+ L  + LE+I   + ++N+R ++TI+
Sbjct: 122 PASVMVQPCVSGFEVVVSSLASGLEAWPLSRVLEVLHGQGLEVISSLTARVNERLMYTIQ 181

Query: 226 FEVVDTRTIDVSELQHKL 239
            EV      D++ LQ KL
Sbjct: 182 VEVNSFDCFDLAWLQQKL 193

[Close]

BLAST of CcUC01G003550.1 vs. ExPASy Swiss-Prot
Match: Q9LN95 (Transcription factor bHLH55 OS=Arabidopsis thaliana OX=3702 GN=BHLH55 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.5e-23
Identity = 69/180 (38.33%), Postives = 108/180 (60.00%), Query Frame = 0


Query: 72  NEHKKKKIIHRDVERQRRQEMSTLYSTLRSLLPLEYLKGKRSICDHMHETVKYIQHMQSK 131
           +E K K+  H+++ERQRRQE ++L+  LR LLP +Y+KGKRS  DH+ E V YI+ +Q K
Sbjct: 70  DEPKNKRAKHKELERQRRQENTSLFKILRYLLPSQYIKGKRSSADHVLEAVNYIKDLQKK 129

Query: 132 IQKLRNKRDELKKDIEDGSNIS--TIETLNSSKRDC-------VVVKPRSGGFQILLDTA 191
           I+++  KRD +K+ I   S+    +I +L SS   C       VVV+P   G +I++   
Sbjct: 130 IKEVSEKRDRIKRSITHPSSRGEFSIRSLASSTCSCVGDTNIAVVVRPCLIGLEIVVSCC 189

Query: 192 TQRRLPLSNLLKFLLTER-LEIIGCHSTKINDRFLHTIEFEVVDTRTIDVSELQHKLTNL 242
            +    LS++L+ L  E+   I+ C ST+++  F+HTI  EV +   +  SELQ K+  +
Sbjct: 190 NRHESCLSSVLQLLAQEQCFNIVSCISTRLHQGFIHTIASEVEEGIEVYFSELQEKIIKI 249

[Close]

BLAST of CcUC01G003550.1 vs. ExPASy Swiss-Prot
Match: Q9LQ08 (Transcription factor bHLH125 OS=Arabidopsis thaliana OX=3702 GN=BHLH125 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.7e-22
Identity = 71/195 (36.41%), Postives = 113/195 (57.95%), Query Frame = 0


Query: 68  DENPNEHKKKKIIHRDVERQRRQEMSTLYSTLRSLLPLEYLKGKRSICDHMHETVKYIQH 127
           ++N ++ + KK+ HRD+ERQRRQE+S+L+  LR+LLP +Y++GKRS  DH+ + V YI+ 
Sbjct: 65  NKNDDDRESKKMKHRDIERQRRQEVSSLFKRLRTLLPFQYIQGKRSTSDHIVQAVNYIKD 124

Query: 128 MQSKIQKLRNKRDELKKDIE-------------DGSNISTIETLNSS------KRDCVVV 187
           +Q KI++L  KR+ +KK I                 + S   TL+SS      K   VVV
Sbjct: 125 LQIKIKELNEKRNRVKKVISATTTTHSAIEECTSSLSSSAASTLSSSCSCVGDKHITVVV 184

Query: 188 KPRSGGFQILLDTATQR-RLPLSNLLKFLLTE-RLEIIGCHSTKINDRFLHTIEFEVVDT 242
            P   G +I++     R +  LS++L+ L  E R  ++ C S +   RF+HTI  +V D 
Sbjct: 185 TPCLVGVEIIISCCLGRNKSCLSSVLQMLAQEQRFSVVSCLSARRQQRFMHTIVSQVEDG 244

[Close]

BLAST of CcUC01G003550.1 vs. ExPASy Swiss-Prot
Match: Q9STJ7 (Transcription factor bHLH118 OS=Arabidopsis thaliana OX=3702 GN=BHLH118 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.5e-21
Identity = 60/163 (36.81%), Postives = 105/163 (64.42%), Query Frame = 0


Query: 77  KKIIHRDVERQRRQEMSTLYSTLRSLLPLEYLKGKRSICDHMHETVKYIQHMQSKIQKLR 136
           +K++H+++E++RRQEM++LY++LRSLLPLE+++GKRS  D +   V YI ++Q  I+ + 
Sbjct: 2   EKLVHKEIEKRRRQEMASLYASLRSLLPLEFIQGKRSTSDQVKGAVNYIDYLQRNIKDIN 61

Query: 137 NKRDELKKDIEDGSNISTIETLNSSKRDCVVVKPRSGGFQILLDTATQRRLPLSNLLKFL 196
           +KRD+L   +   S  S+ E   +   + VV++P   G +I+L      + P S++L+ L
Sbjct: 62  SKRDDLVL-LSGRSFRSSNEQEWNEISNHVVIRPCLVGIEIVLSIL---QTPFSSVLQVL 121

Query: 197 LTERLEIIGCHSTKINDRFLHTIEFEVVDTRTIDVSELQHKLT 240
               L ++G   + +NDR +HT++ EV D   ID+++L+  LT
Sbjct: 122 REHGLYVLGYICSSVNDRLIHTLQAEVNDLALIDLADLKDTLT 160

[Close]

BLAST of CcUC01G003550.1 vs. ExPASy TrEMBL
Match: A0A0A0KMQ4 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G157230 PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 7.6e-98
Identity = 200/255 (78.43%), Postives = 220/255 (86.27%), Query Frame = 0


Query: 1   MELECIEFPFPFDQADELFPLPSLTPIDLSVS-QPPLICSKNKNDKNASEKPKNNRRRKS 60
           M+L+CI+ PFPFDQ DELFPLPSL+PI LSV+  PPLI S N  ++N SEKPK  RRRKS
Sbjct: 1   MDLDCIQSPFPFDQVDELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRKS 60

Query: 61  PNTSDDIEDE--NPNEHKKKKIIHRDVERQRRQEMSTLYSTLRSLLPLEYLKGKRSICDH 120
           PNTS DIEDE  NPNEHKKKKIIHRDVERQRRQEMSTLY+ LRSLLP+EYLKGKRSICDH
Sbjct: 61  PNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICDH 120

Query: 121 MHETVKYIQHMQSKIQKLRNKRDELKKDIEDGS---NISTIETLNSSKRDCVVVKPRS-G 180
           MHETVKYIQHMQ+KIQ LRNKRDELKK+IEDG    NI+TIETLNSSKRD V+V PRS G
Sbjct: 121 MHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSRNITTIETLNSSKRDSVLVMPRSCG 180

Query: 181 GFQILLDTATQRRLPLSNLLKFLLTERLEIIGCHSTKINDRFLHTIEFE-VVDTRTIDVS 240
           G QILLDTAT  RLPLSNL+KFL+T+ L+II CHST+ NDRFLHTIE E  VD  TID+S
Sbjct: 181 GVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIESEAAVDVETIDMS 240

Query: 241 ELQHKLTNLEYFPLD 248
           ELQ+KLTNLEYFPLD
Sbjct: 241 ELQNKLTNLEYFPLD 255

[Close]

BLAST of CcUC01G003550.1 vs. ExPASy TrEMBL
Match: A0A097IYP0 (BHLH transcription factor OS=Cucumis sativus OX=3659 GN=Csa5G157230 PE=2 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 7.6e-98
Identity = 200/255 (78.43%), Postives = 220/255 (86.27%), Query Frame = 0


Query: 1   MELECIEFPFPFDQADELFPLPSLTPIDLSVS-QPPLICSKNKNDKNASEKPKNNRRRKS 60
           M+L+CI+ PFPFDQ DELFPLPSL+PI LSV+  PPLI S N  ++N SEKPK  RRRKS
Sbjct: 1   MDLDCIQSPFPFDQVDELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRKS 60

Query: 61  PNTSDDIEDE--NPNEHKKKKIIHRDVERQRRQEMSTLYSTLRSLLPLEYLKGKRSICDH 120
           PNTS DIEDE  NPNEHKKKKIIHRDVERQRRQEMSTLY+ LRSLLP+EYLKGKRSICDH
Sbjct: 61  PNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICDH 120

Query: 121 MHETVKYIQHMQSKIQKLRNKRDELKKDIEDG---SNISTIETLNSSKRDCVVVKPRS-G 180
           MHETVKYIQHMQ+KIQ LRNKRDELKK+IEDG    NI+TIETLNSSKRD V+V PRS G
Sbjct: 121 MHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSGNITTIETLNSSKRDSVLVMPRSCG 180

Query: 181 GFQILLDTATQRRLPLSNLLKFLLTERLEIIGCHSTKINDRFLHTIEFE-VVDTRTIDVS 240
           G QILLDTAT  RLPLSNL+KFL+T+ L+II CHST+ NDRFLHTIE E  VD  TID+S
Sbjct: 181 GVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIETEAAVDVETIDMS 240

Query: 241 ELQHKLTNLEYFPLD 248
           ELQ+KLTNLEYFPLD
Sbjct: 241 ELQNKLTNLEYFPLD 255

[Close]

BLAST of CcUC01G003550.1 vs. ExPASy TrEMBL
Match: A0A6J1DUZ3 (transcription factor bHLH118-like OS=Momordica charantia OX=3673 GN=LOC111023734 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 3.2e-72
Identity = 159/244 (65.16%), Postives = 187/244 (76.64%), Query Frame = 0


Query: 6   IEFPFPFDQADELFPLPSLTPIDLSVSQPPLICSKNKNDKNASEKPKNNRRRKSPNTSDD 65
           I+ PF FD  D+LFPLP L+ +D+ + Q P + S+      A+ KPKN RRRK P  S D
Sbjct: 5   IDSPFSFDVVDDLFPLPPLSCMDIPLPQLPSVVSR----PAAALKPKNCRRRKPPPVSSD 64

Query: 66  IEDENPNEHKKKKIIHRDVERQRRQEMSTLYSTLRSLLPLEYLKGKRSICDHMHETVKYI 125
               NPNEHKK+KIIHRDVERQRRQEMSTLY+TLRSLLP EYLKGKRSICDHMHETVKYI
Sbjct: 65  --HSNPNEHKKRKIIHRDVERQRRQEMSTLYATLRSLLPFEYLKGKRSICDHMHETVKYI 124

Query: 126 QHMQSKIQKLRNKRDELKKDIEDGSNISTIETLNSSKRDCVVVKPRSGGFQILLDTATQR 185
           +HMQ ++Q+L +KR+ELKK   + S+  T ETL++SKRD V V+PR  G Q++LDT TQ 
Sbjct: 125 RHMQRQVQELSDKREELKKLSGEDSDAGTAETLSASKRDSVAVRPRGEGVQVVLDTGTQH 184

Query: 186 RLPLSNLLKFLLTERLEIIGCHSTKINDRFLHTIEFEVVD--TRTIDVSELQHKLTNLEY 245
           RLP+SN+L+ LL   LEI+GC STKINDRFLHTIE  V D   R IDVSEL HKLTNLEY
Sbjct: 185 RLPVSNILEALLAVGLEIVGCISTKINDRFLHTIE-AVPDGSLRNIDVSELHHKLTNLEY 241

Query: 246 FPLD 248
           FPLD
Sbjct: 245 FPLD 241

[Close]

BLAST of CcUC01G003550.1 vs. ExPASy TrEMBL
Match: A0A6J1DZB0 (transcription factor bHLH120-like OS=Momordica charantia OX=3673 GN=LOC111025986 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 9.4e-72
Identity = 159/250 (63.60%), Postives = 185/250 (74.00%), Query Frame = 0


Query: 1   MELECIEFPFPFDQADELFPLPSLTPIDLSVSQPPLICSKNK-NDKNASEKPKNNRRRKS 60
           MEL C E PFPFDQ +ELFPLPSL+ +D+ V   P   S  K +D N S+KPKN RRRKS
Sbjct: 1   MELACFESPFPFDQVEELFPLPSLSSLDIPVPTLPFSSSMEKSSDNNVSQKPKNGRRRKS 60

Query: 61  PN--TSDDIE-DENPNEHKKKKIIHRDVERQRRQEMSTLYSTLRSLLPLEYLKGKRSICD 120
           PN  TSDD     NPNEHKKKKIIHRDVERQRRQEMSTLY+ LRSLLPLEYLKGKRSICD
Sbjct: 61  PNNTTSDDAGCYNNPNEHKKKKIIHRDVERQRRQEMSTLYANLRSLLPLEYLKGKRSICD 120

Query: 121 HMHETVKYIQHMQSKIQKLRNKRDELKK---DIEDGSNISTIETLNSSKRD--CVVVKPR 180
           HM ETVKYIQH Q+ IQKL NKRDELK+     +  S+ +TIETLNSSKRD   V V  +
Sbjct: 121 HMQETVKYIQHTQANIQKLSNKRDELKRLSGHDDAASDTATIETLNSSKRDSVSVAVNQK 180

Query: 181 SGGFQILLDTATQRRLPLSNLLKFLLTERLEIIGCHSTKINDRFLHTIEFEVVDTRTIDV 240
            GG Q++L T T   LPLS +L+ L+ ++ +I+ C STK+ND FLHTI+ +      +DV
Sbjct: 181 QGGVQVVLHTPTHHGLPLSTILQALIAQKFDILSCISTKVNDSFLHTIDSQAAALTNVDV 240

Query: 241 SELQHKLTNL 242
           SELQHKLTNL
Sbjct: 241 SELQHKLTNL 250

[Close]

BLAST of CcUC01G003550.1 vs. ExPASy TrEMBL
Match: A0A5A7TLF7 (Transcription factor bHLH36-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003210 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 8.8e-70
Identity = 166/259 (64.09%), Postives = 193/259 (74.52%), Query Frame = 0


Query: 1   MELECIEFPFPFDQADELFPLPSLTPID-LSVSQPPLICSKNKNDK-NASEKPKNNRRRK 60
           M+L  +E PF FD  DEL PLPSL+ ID   V Q P I   N N+    S +PKN RR+K
Sbjct: 1   MDLNNVESPFSFDLGDELLPLPSLSCIDNCFVPQFPSILENNNNNSITVSPRPKNGRRKK 60

Query: 61  SP-NTSDDIEDE-NPNEHKKKKIIHRDVERQRRQEMSTLYSTLRSLLPLEYLKGKRSICD 120
            P NTSDD +DE N NEHKKKKI+HRDVERQRRQEMS+LYSTLRSLLP+EYLKGKRSICD
Sbjct: 61  PPANTSDDKDDENNSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSICD 120

Query: 121 HMHETVKYIQHMQSKIQKLRNKRDELKKDIEDGSNISTI--ETLNSSKRDCVVVKPR--S 180
           HMHETVKYI++MQSKIQ+L +KRDELKK   +  N   +  ETL S+KRD VVV+ R  S
Sbjct: 121 HMHETVKYIRYMQSKIQELCDKRDELKKLQSNNQNPDMVETETLKSTKRDKVVVRARDGS 180

Query: 181 GGFQILLDTATQRRLPLSNLLKFLLTERLEIIGCHSTKINDRFLHTIEFEVVDTRT---- 240
           GG Q++LDTAT+ RLPLSN+L  L  + LEI+ C S K+NDRFLHTIE + V T T    
Sbjct: 181 GGIQVILDTATRHRLPLSNILVALTDQGLEILSCSSNKLNDRFLHTIESQPVFTSTNSPI 240

Query: 241 IDVSELQHKLTNLEYFPLD 248
           IDVS LQ+ LTNLEY PLD
Sbjct: 241 IDVSGLQYTLTNLEYCPLD 259

[Close]

BLAST of CcUC01G003550.1 vs. TAIR 10
Match: AT4G25410.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 116.3 bits (290), Expect = 3.5e-26
Identity = 73/207 (35.27%), Postives = 126/207 (60.87%), Query Frame = 0


Query: 40  KNKNDKN-ASEKPKNNRRRKSPNTSDDIEDENPNEHKKKKIIHRDVERQRRQEMSTLYST 99
           KN N K    ++P ++      +       E  +  KKKK++HRD+ERQRRQEM+TL++T
Sbjct: 5   KNLNPKGYQRQRPFSSAGESGGSGGSGTAHETDDNKKKKKLLHRDIERQRRQEMATLFAT 64

Query: 100 LRSLLPLEYLKGKRSICDHMHETVKYIQHMQSKIQKLRNKRDELKKDIEDGSNIS----- 159
           LR+ LPL+Y+KGKR++ DH++  V +I+  +++I++L  +RDEL ++   G   +     
Sbjct: 65  LRTHLPLKYIKGKRAVSDHVNGAVNFIKDTEARIKELSARRDELSRETGQGYKSNPDPGK 124

Query: 160 TIETLNSSKRDCVVVKPRSGGFQILL--DTATQRRLPLSNLLKFLLTERLEIIGCHSTKI 219
           T   +  S+   V+V+P   G ++++  +++    LPLS +L+ +  + LE++   +T++
Sbjct: 125 TGSDVGKSEPATVMVQPHVSGLEVVVSSNSSGPEALPLSKVLETIQEKGLEVMSSFTTRV 184

Query: 220 NDRFLHTIEFEVVDTRTIDVSELQHKL 239
           NDR +HTI+ EV     ID+  LQ KL
Sbjct: 185 NDRLMHTIQVEVNSFGCIDLLWLQQKL 211

[Close]

BLAST of CcUC01G003550.1 vs. TAIR 10
Match: AT5G51790.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 114.8 bits (286), Expect = 1.0e-25
Identity = 71/198 (35.86%), Postives = 122/198 (61.62%), Query Frame = 0


Query: 46  NASEKPKNNRRRKSPNTSDDIEDENPNEHKKKKIIHRDVERQRRQEMSTLYSTLRSLLPL 105
           N S  PK  R +        +  E     K+KK++HR++ERQRRQEM+ L+++LRS LPL
Sbjct: 2   NPSNNPKKTRHQ------SHMPQERDETKKEKKLLHRNIERQRRQEMAILFASLRSQLPL 61

Query: 106 EYLKGKRSICDHMHETVKYIQHMQSKIQKLRNKRDELKKDIEDGSNISTIETLNSSKRD- 165
           +Y+KGKR++ DH++  V +I+  Q++I+ L  +RDELK++I D ++++   + + S R  
Sbjct: 62  KYIKGKRAMSDHVNGAVSFIKDTQTRIKDLSARRDELKREIGDPTSLTGSGSGSGSSRSE 121

Query: 166 --CVVVKPRSGGFQILLDTATQ--RRLPLSNLLKFLLTERLEIIGCHSTKINDRFLHTIE 225
              V+V+P   GF++++ +        PLS +L+ L  + LE+I   + ++N+R ++TI+
Sbjct: 122 PASVMVQPCVSGFEVVVSSLASGLEAWPLSRVLEVLHGQGLEVISSLTARVNERLMYTIQ 181

Query: 226 FEVVDTRTIDVSELQHKL 239
            EV      D++ LQ KL
Sbjct: 182 VEVNSFDCFDLAWLQQKL 193

[Close]

BLAST of CcUC01G003550.1 vs. TAIR 10
Match: AT1G12540.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 110.2 bits (274), Expect = 2.5e-24
Identity = 69/180 (38.33%), Postives = 108/180 (60.00%), Query Frame = 0


Query: 72  NEHKKKKIIHRDVERQRRQEMSTLYSTLRSLLPLEYLKGKRSICDHMHETVKYIQHMQSK 131
           +E K K+  H+++ERQRRQE ++L+  LR LLP +Y+KGKRS  DH+ E V YI+ +Q K
Sbjct: 70  DEPKNKRAKHKELERQRRQENTSLFKILRYLLPSQYIKGKRSSADHVLEAVNYIKDLQKK 129

Query: 132 IQKLRNKRDELKKDIEDGSNIS--TIETLNSSKRDC-------VVVKPRSGGFQILLDTA 191
           I+++  KRD +K+ I   S+    +I +L SS   C       VVV+P   G +I++   
Sbjct: 130 IKEVSEKRDRIKRSITHPSSRGEFSIRSLASSTCSCVGDTNIAVVVRPCLIGLEIVVSCC 189

Query: 192 TQRRLPLSNLLKFLLTER-LEIIGCHSTKINDRFLHTIEFEVVDTRTIDVSELQHKLTNL 242
            +    LS++L+ L  E+   I+ C ST+++  F+HTI  EV +   +  SELQ K+  +
Sbjct: 190 NRHESCLSSVLQLLAQEQCFNIVSCISTRLHQGFIHTIASEVEEGIEVYFSELQEKIIKI 249

[Close]

BLAST of CcUC01G003550.1 vs. TAIR 10
Match: AT1G62975.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 107.8 bits (268), Expect = 1.2e-23
Identity = 71/195 (36.41%), Postives = 113/195 (57.95%), Query Frame = 0


Query: 68  DENPNEHKKKKIIHRDVERQRRQEMSTLYSTLRSLLPLEYLKGKRSICDHMHETVKYIQH 127
           ++N ++ + KK+ HRD+ERQRRQE+S+L+  LR+LLP +Y++GKRS  DH+ + V YI+ 
Sbjct: 65  NKNDDDRESKKMKHRDIERQRRQEVSSLFKRLRTLLPFQYIQGKRSTSDHIVQAVNYIKD 124

Query: 128 MQSKIQKLRNKRDELKKDIE-------------DGSNISTIETLNSS------KRDCVVV 187
           +Q KI++L  KR+ +KK I                 + S   TL+SS      K   VVV
Sbjct: 125 LQIKIKELNEKRNRVKKVISATTTTHSAIEECTSSLSSSAASTLSSSCSCVGDKHITVVV 184

Query: 188 KPRSGGFQILLDTATQR-RLPLSNLLKFLLTE-RLEIIGCHSTKINDRFLHTIEFEVVDT 242
            P   G +I++     R +  LS++L+ L  E R  ++ C S +   RF+HTI  +V D 
Sbjct: 185 TPCLVGVEIIISCCLGRNKSCLSSVLQMLAQEQRFSVVSCLSARRQQRFMHTIVSQVEDG 244

[Close]

BLAST of CcUC01G003550.1 vs. TAIR 10
Match: AT4G25400.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 104.8 bits (260), Expect = 1.0e-22
Identity = 60/163 (36.81%), Postives = 105/163 (64.42%), Query Frame = 0


Query: 77  KKIIHRDVERQRRQEMSTLYSTLRSLLPLEYLKGKRSICDHMHETVKYIQHMQSKIQKLR 136
           +K++H+++E++RRQEM++LY++LRSLLPLE+++GKRS  D +   V YI ++Q  I+ + 
Sbjct: 2   EKLVHKEIEKRRRQEMASLYASLRSLLPLEFIQGKRSTSDQVKGAVNYIDYLQRNIKDIN 61

Query: 137 NKRDELKKDIEDGSNISTIETLNSSKRDCVVVKPRSGGFQILLDTATQRRLPLSNLLKFL 196
           +KRD+L   +   S  S+ E   +   + VV++P   G +I+L      + P S++L+ L
Sbjct: 62  SKRDDLVL-LSGRSFRSSNEQEWNEISNHVVIRPCLVGIEIVLSIL---QTPFSSVLQVL 121

Query: 197 LTERLEIIGCHSTKINDRFLHTIEFEVVDTRTIDVSELQHKLT 240
               L ++G   + +NDR +HT++ EV D   ID+++L+  LT
Sbjct: 122 REHGLYVLGYICSSVNDRLIHTLQAEVNDLALIDLADLKDTLT 160

The following BLAST results are available for this feature:

BLAST of CcUC01G003550.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876288.1	1.3e-104	84.43	transcription factor bHLH120-like [Benincasa hispida]	[more]
KGN50164.1	1.6e-97	78.43	hypothetical protein Csa_000575 [Cucumis sativus]	[more]
NP_001295841.1	1.6e-97	78.43	transcription factor bHLH118-like [Cucumis sativus] >AIT72027.1 bHLH transcripti...	[more]
KAG6579461.1	3.9e-80	67.90	Transcription factor basic helix-loop-helix 120, partial [Cucurbita argyrosperma...	[more]
XP_022156904.1	6.7e-72	65.16	transcription factor bHLH118-like [Momordica charantia]	[more]

BLAST of CcUC01G003550.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9STJ6	4.9e-25	35.27	Transcription factor bHLH126 OS=Arabidopsis thaliana OX=3702 GN=BHLH126 PE=2 SV=...	[more]
Q9FLI0	1.4e-24	35.86	Transcription factor bHLH120 OS=Arabidopsis thaliana OX=3702 GN=BHLH120 PE=2 SV=...	[more]
Q9LN95	3.5e-23	38.33	Transcription factor bHLH55 OS=Arabidopsis thaliana OX=3702 GN=BHLH55 PE=2 SV=1	[more]
Q9LQ08	1.7e-22	36.41	Transcription factor bHLH125 OS=Arabidopsis thaliana OX=3702 GN=BHLH125 PE=2 SV=...	[more]
Q9STJ7	1.5e-21	36.81	Transcription factor bHLH118 OS=Arabidopsis thaliana OX=3702 GN=BHLH118 PE=2 SV=...	[more]

BLAST of CcUC01G003550.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMQ4	7.6e-98	78.43	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G157230 PE=4 S...	[more]
A0A097IYP0	7.6e-98	78.43	BHLH transcription factor OS=Cucumis sativus OX=3659 GN=Csa5G157230 PE=2 SV=1	[more]
A0A6J1DUZ3	3.2e-72	65.16	transcription factor bHLH118-like OS=Momordica charantia OX=3673 GN=LOC111023734...	[more]
A0A6J1DZB0	9.4e-72	63.60	transcription factor bHLH120-like OS=Momordica charantia OX=3673 GN=LOC111025986...	[more]
A0A5A7TLF7	8.8e-70	64.09	Transcription factor bHLH36-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]

BLAST of CcUC01G003550.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25410.1	3.5e-26	35.27	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G51790.1	1.0e-25	35.86	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G12540.1	2.5e-24	38.33	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G62975.1	1.2e-23	36.41	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G25400.1	1.0e-22	36.81	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 125..152
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..82
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..82
None	No IPR available	PANTHER	PTHR13935:SF110	HELIX-LOOP-HELIX DNA-BINDING SUPERFAMILY PROTEIN, PUTATIVE-RELATED	coord: 33..241
None	No IPR available	CDD	cd18914	bHLH_AtORG2_like	coord: 77..151 e-value: 2.90086E-27 score: 98.1443
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 82..134 e-value: 6.5E-5 score: 32.3
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 78..129 e-value: 3.3E-9 score: 36.6
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 76..128 score: 13.172961
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 66..157 e-value: 9.1E-13 score: 50.0
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 74..146
IPR015660	Achaete-scute transcription factor-related	PANTHER	PTHR13935	ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED	coord: 33..241

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CcUC01G003550	CcUC01G003550	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC01G003550.1-exon	CcUC01G003550.1-exon-CicolChr01:3543406..3543822	exon
CcUC01G003550.1-exon	CcUC01G003550.1-exon-CicolChr01:3544661..3544987	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC01G003550.1-cds	CcUC01G003550.1-cds-CicolChr01:3543406..3543822	CDS
CcUC01G003550.1-cds	CcUC01G003550.1-cds-CicolChr01:3544661..3544987	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CcUC01G003550.1	CcUC01G003550.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:2000112	regulation of cellular macromolecule biosynthetic process
cellular_component	GO:0090575	RNA polymerase II transcription regulator complex
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding