Homology
BLAST of Carg24193 vs. NCBI nr
Match:
KAG7020933.1 (RNA-binding KH domain-containing protein PEPPER [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 480.3 bits (1235), Expect = 9.7e-132
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0
Query: 1 MATNTTTENGSTDADALNSSPQLAFEAAPEPDSTEAGGAESDIDPSNQDYLSAPASDSVP 60
MATNTTTENGSTDADALNSSPQLAFEAAPEPDSTEAGGAESDIDPSNQDYLSAPASDSVP
Sbjct: 1 MATNTTTENGSTDADALNSSPQLAFEAAPEPDSTEAGGAESDIDPSNQDYLSAPASDSVP 60
Query: 61 HESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGA 120
HESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGA
Sbjct: 61 HESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGA 120
Query: 121 VGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQA 180
VGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQA
Sbjct: 121 VGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQA 180
Query: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELAGRNLKGSQGSRGSGGP 240
INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELAGRNLKGSQGSRGSGGP
Sbjct: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELAGRNLKGSQGSRGSGGP 240
Query: 241 PKEVFS 247
PKEVFS
Sbjct: 241 PKEVFS 246
BLAST of Carg24193 vs. NCBI nr
Match:
KAG6586109.1 (RNA-binding KH domain-containing protein PEPPER, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 440.7 bits (1132), Expect = 8.6e-120
Identity = 226/229 (98.69%), Postives = 226/229 (98.69%), Query Frame = 0
Query: 1 MATNTTTENGSTDADALNSSPQLAFEAAPEPDSTEAGGAESDIDPSNQDYLSAPASDSVP 60
MATNTTTENGSTDADALNSSPQLAFEAAPEPDSTEAGGAESDIDPSNQDYLSAPASDSVP
Sbjct: 1 MATNTTTENGSTDADALNSSPQLAFEAAPEPDSTEAGGAESDIDPSNQDYLSAPASDSVP 60
Query: 61 HESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGA 120
HESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGA
Sbjct: 61 HESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGA 120
Query: 121 VGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQA 180
VGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQA
Sbjct: 121 VGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQA 180
Query: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELAGRNLK 230
INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVEL G LK
Sbjct: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELQGETLK 229
BLAST of Carg24193 vs. NCBI nr
Match:
XP_022965514.1 (RNA-binding KH domain-containing protein PEPPER-like [Cucurbita maxima])
HSP 1 Score: 432.2 bits (1110), Expect = 3.0e-117
Identity = 222/229 (96.94%), Postives = 224/229 (97.82%), Query Frame = 0
Query: 1 MATNTTTENGSTDADALNSSPQLAFEAAPEPDSTEAGGAESDIDPSNQDYLSAPASDSVP 60
MATNTTTENGSTDADALNSSPQLAFEAAPEPDSTEAGGAESDIDPSNQ YLSAPASDSVP
Sbjct: 1 MATNTTTENGSTDADALNSSPQLAFEAAPEPDSTEAGGAESDIDPSNQVYLSAPASDSVP 60
Query: 61 HESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGA 120
HESPNHA ASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGA
Sbjct: 61 HESPNHAVASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGA 120
Query: 121 VGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQA 180
VGTPDRVVLISGKEEPEAPLSPAMDAVLR+FKRVSGFSENEDEAKASFCSVRLLVASTQA
Sbjct: 121 VGTPDRVVLISGKEEPEAPLSPAMDAVLRVFKRVSGFSENEDEAKASFCSVRLLVASTQA 180
Query: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELAGRNLK 230
INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERM+EL G LK
Sbjct: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMLELQGETLK 229
BLAST of Carg24193 vs. NCBI nr
Match:
XP_023538336.1 (RNA-binding KH domain-containing protein PEPPER-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 429.5 bits (1103), Expect = 2.0e-116
Identity = 221/229 (96.51%), Postives = 222/229 (96.94%), Query Frame = 0
Query: 1 MATNTTTENGSTDADALNSSPQLAFEAAPEPDSTEAGGAESDIDPSNQDYLSAPASDSVP 60
MATN TTENGSTDADALNSSPQLA EAA EPDSTEAGGAESDIDPSNQDYLSAPASD VP
Sbjct: 1 MATNATTENGSTDADALNSSPQLACEAAAEPDSTEAGGAESDIDPSNQDYLSAPASDYVP 60
Query: 61 HESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGA 120
HESPNHAGASDKKWPGWPGDCVFR+IVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGA
Sbjct: 61 HESPNHAGASDKKWPGWPGDCVFRIIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGA 120
Query: 121 VGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQA 180
VGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQA
Sbjct: 121 VGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQA 180
Query: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELAGRNLK 230
INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVEL G LK
Sbjct: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELQGETLK 229
BLAST of Carg24193 vs. NCBI nr
Match:
XP_022938096.1 (RNA-binding KH domain-containing protein PEPPER-like [Cucurbita moschata])
HSP 1 Score: 429.5 bits (1103), Expect = 2.0e-116
Identity = 220/229 (96.07%), Postives = 222/229 (96.94%), Query Frame = 0
Query: 1 MATNTTTENGSTDADALNSSPQLAFEAAPEPDSTEAGGAESDIDPSNQDYLSAPASDSVP 60
MATNTTTENGSTDADALNSS QLAFEAAPEPDSTEA GAES IDPSNQDYLSAPASDS+P
Sbjct: 1 MATNTTTENGSTDADALNSSAQLAFEAAPEPDSTEASGAESGIDPSNQDYLSAPASDSLP 60
Query: 61 HESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGA 120
HESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGA
Sbjct: 61 HESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGA 120
Query: 121 VGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQA 180
VGTPDRVVLISGKEEPEAP SPAMDAVLR+FKRVSGFSENEDEAKASFCSVRLLVASTQA
Sbjct: 121 VGTPDRVVLISGKEEPEAPFSPAMDAVLRVFKRVSGFSENEDEAKASFCSVRLLVASTQA 180
Query: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELAGRNLK 230
INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVEL G LK
Sbjct: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELQGETLK 229
BLAST of Carg24193 vs. ExPASy Swiss-Prot
Match:
Q9SZH4 (RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 GN=PEP PE=1 SV=1)
HSP 1 Score: 244.2 bits (622), Expect = 1.5e-63
Identity = 120/170 (70.59%), Postives = 145/170 (85.29%), Query Frame = 0
Query: 64 PNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGAVGT 123
P+ +++++WPGWPGDCVFR+IVPV KVG+IIGR+GD IKK+CEETRARI+VLDG V T
Sbjct: 57 PDTNDSAEERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNT 116
Query: 124 PDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDE----AKASFCSVRLLVASTQ 183
PDR+VLISGKEEPEA +SPAMDAVLR+F+RVSG +N+D+ A + F SVRLLVASTQ
Sbjct: 117 PDRIVLISGKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAGSVFSSVRLLVASTQ 176
Query: 184 AINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELAGRNLK 230
AINLIGKQGSLIKSI E++GASVR+LS +E PFYA DER+V+L G LK
Sbjct: 177 AINLIGKQGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALK 226
BLAST of Carg24193 vs. ExPASy Swiss-Prot
Match:
Q9SR13 (Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV=1)
HSP 1 Score: 170.2 bits (430), Expect = 2.8e-41
Identity = 101/237 (42.62%), Postives = 138/237 (58.23%), Query Frame = 0
Query: 4 NTTTENGSTDADALNSSPQLAFEAAPEPDSTEAGGAESDIDPSNQDYLSAPASD------ 63
N ++ S D Q F+ E A+ D+ N D + D
Sbjct: 98 NEDVQDHSQDDLQYQPQNQEQFQLQDEAHDQAQYQAQGDVQDHNGDEVQDKVEDEEGIPE 157
Query: 64 -------SVPHESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEET 123
S P E G +K+WPGWPG+ VFR++VP KVGSIIGR+GD+IKKI EET
Sbjct: 158 HLESLQKSEPEEDAT-VGGEEKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEET 217
Query: 124 RARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKR-VSGFSENEDEA-KASF 183
RARI++LDG GT +R V++SGKEEPE+ L P+MD +LR+ R V G +A S
Sbjct: 218 RARIKILDGPPGTTERAVMVSGKEEPESSLPPSMDGLLRVHMRIVDGLDGEASQAPPPSK 277
Query: 184 CSVRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELAG 226
S RLLV ++QA +LIGKQG +K+IQE++ VRVL +++P +A D+R+VE+ G
Sbjct: 278 VSTRLLVPASQAGSLIGKQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVG 333
BLAST of Carg24193 vs. ExPASy Swiss-Prot
Match:
F4KDN0 (KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 SV=1)
HSP 1 Score: 80.1 bits (196), Expect = 3.9e-14
Identity = 40/148 (27.03%), Postives = 83/148 (56.08%), Query Frame = 0
Query: 80 DCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAP 139
D VF+++ G +IG G +++ + ET A I V + +R++ ++ E PE
Sbjct: 451 DVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPECQ 510
Query: 140 LSPAMDAVLRIFKRVSGFSENE--DEAKASFCSVRLLVASTQAINLIGKQGSLIKSIQES 199
SPA A++ IF R+ + N+ D S + RL+V ++Q ++GK G ++ ++++
Sbjct: 511 SSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVIVSEMRKT 570
Query: 200 TGASVRVLSGDEMPFYAGPDERMVELAG 226
TGA++++L ++ P ++++V++ G
Sbjct: 571 TGAAIQILKVEQNPKCISENDQVVQITG 598
BLAST of Carg24193 vs. ExPASy Swiss-Prot
Match:
Q5E9A3 (Poly(rC)-binding protein 1 OS=Bos taurus OX=9913 GN=PCBP1 PE=2 SV=1)
HSP 1 Score: 78.2 bits (191), Expect = 1.5e-13
Identity = 51/143 (35.66%), Postives = 86/143 (60.14%), Query Frame = 0
Query: 84 RLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPA 143
RL++ +VGSIIG++G+ +K+I EE+ ARI + +G P+R++ ++G P + A
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTG---PTNAIFKA 76
Query: 144 MDAVL-RIFKRVSGFSENEDEAKASFCSVRLLVASTQAINLIGKQGSLIKSIQESTGASV 203
++ ++ + ++ N A ++RL+V +TQ +LIGK G IK I+ESTGA V
Sbjct: 77 FAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQV 136
Query: 204 RVLSGDEMPFYAGPDERMVELAG 226
+V +GD +P ER + +AG
Sbjct: 137 QV-AGDMLP---NSTERAITIAG 150
BLAST of Carg24193 vs. ExPASy Swiss-Prot
Match:
Q15365 (Poly(rC)-binding protein 1 OS=Homo sapiens OX=9606 GN=PCBP1 PE=1 SV=2)
HSP 1 Score: 78.2 bits (191), Expect = 1.5e-13
Identity = 51/143 (35.66%), Postives = 86/143 (60.14%), Query Frame = 0
Query: 84 RLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPA 143
RL++ +VGSIIG++G+ +K+I EE+ ARI + +G P+R++ ++G P + A
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTG---PTNAIFKA 76
Query: 144 MDAVL-RIFKRVSGFSENEDEAKASFCSVRLLVASTQAINLIGKQGSLIKSIQESTGASV 203
++ ++ + ++ N A ++RL+V +TQ +LIGK G IK I+ESTGA V
Sbjct: 77 FAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQV 136
Query: 204 RVLSGDEMPFYAGPDERMVELAG 226
+V +GD +P ER + +AG
Sbjct: 137 QV-AGDMLP---NSTERAITIAG 150
BLAST of Carg24193 vs. ExPASy TrEMBL
Match:
A0A6J1HR76 (RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita maxima OX=3661 GN=LOC111465395 PE=4 SV=1)
HSP 1 Score: 432.2 bits (1110), Expect = 1.5e-117
Identity = 222/229 (96.94%), Postives = 224/229 (97.82%), Query Frame = 0
Query: 1 MATNTTTENGSTDADALNSSPQLAFEAAPEPDSTEAGGAESDIDPSNQDYLSAPASDSVP 60
MATNTTTENGSTDADALNSSPQLAFEAAPEPDSTEAGGAESDIDPSNQ YLSAPASDSVP
Sbjct: 1 MATNTTTENGSTDADALNSSPQLAFEAAPEPDSTEAGGAESDIDPSNQVYLSAPASDSVP 60
Query: 61 HESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGA 120
HESPNHA ASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGA
Sbjct: 61 HESPNHAVASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGA 120
Query: 121 VGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQA 180
VGTPDRVVLISGKEEPEAPLSPAMDAVLR+FKRVSGFSENEDEAKASFCSVRLLVASTQA
Sbjct: 121 VGTPDRVVLISGKEEPEAPLSPAMDAVLRVFKRVSGFSENEDEAKASFCSVRLLVASTQA 180
Query: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELAGRNLK 230
INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERM+EL G LK
Sbjct: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMLELQGETLK 229
BLAST of Carg24193 vs. ExPASy TrEMBL
Match:
A0A6J1FC72 (RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita moschata OX=3662 GN=LOC111444285 PE=4 SV=1)
HSP 1 Score: 429.5 bits (1103), Expect = 9.6e-117
Identity = 220/229 (96.07%), Postives = 222/229 (96.94%), Query Frame = 0
Query: 1 MATNTTTENGSTDADALNSSPQLAFEAAPEPDSTEAGGAESDIDPSNQDYLSAPASDSVP 60
MATNTTTENGSTDADALNSS QLAFEAAPEPDSTEA GAES IDPSNQDYLSAPASDS+P
Sbjct: 1 MATNTTTENGSTDADALNSSAQLAFEAAPEPDSTEASGAESGIDPSNQDYLSAPASDSLP 60
Query: 61 HESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGA 120
HESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGA
Sbjct: 61 HESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGA 120
Query: 121 VGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQA 180
VGTPDRVVLISGKEEPEAP SPAMDAVLR+FKRVSGFSENEDEAKASFCSVRLLVASTQA
Sbjct: 121 VGTPDRVVLISGKEEPEAPFSPAMDAVLRVFKRVSGFSENEDEAKASFCSVRLLVASTQA 180
Query: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELAGRNLK 230
INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVEL G LK
Sbjct: 181 INLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELQGETLK 229
BLAST of Carg24193 vs. ExPASy TrEMBL
Match:
A0A6J1K7W7 (RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita maxima OX=3661 GN=LOC111491969 PE=4 SV=1)
HSP 1 Score: 384.4 bits (986), Expect = 3.5e-103
Identity = 200/233 (85.84%), Postives = 213/233 (91.42%), Query Frame = 0
Query: 1 MATNTTTENGSTDADALNSSPQ---LAFEAAPEPDSTEAGGAESDIDPSNQDYLSAPASD 60
MATNT T+NGSTDA+ALN +P+ LA AA EPDS EAGGAESD+DPSNQDYLSAPASD
Sbjct: 1 MATNTATDNGSTDANALNFNPESSPLASVAAAEPDSMEAGGAESDLDPSNQDYLSAPASD 60
Query: 61 SVPH-ESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRV 120
S H ESPNH ASDKKWPGWPGDCVFRLIVPVVKVGSIIGR+GDLIKK+CEETRARIRV
Sbjct: 61 SADHDESPNHTDASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRV 120
Query: 121 LDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVA 180
LDGAVGTPDRVVLISGKE+PEAPLSPAMDAV+R+FKRV FSENEDEAK SFCS+RLLVA
Sbjct: 121 LDGAVGTPDRVVLISGKEDPEAPLSPAMDAVIRVFKRVFLFSENEDEAKTSFCSIRLLVA 180
Query: 181 STQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELAGRNLK 230
STQAINLIGKQGSLIKSIQESTGAS+RVLSGDEMPFYAG DERMVEL G +LK
Sbjct: 181 STQAINLIGKQGSLIKSIQESTGASIRVLSGDEMPFYAGADERMVELQGESLK 233
BLAST of Carg24193 vs. ExPASy TrEMBL
Match:
A0A6J1EV22 (RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita moschata OX=3662 GN=LOC111436202 PE=4 SV=1)
HSP 1 Score: 384.4 bits (986), Expect = 3.5e-103
Identity = 200/233 (85.84%), Postives = 213/233 (91.42%), Query Frame = 0
Query: 1 MATNTTTENGSTDADALNSSPQ---LAFEAAPEPDSTEAGGAESDIDPSNQDYLSAPASD 60
MATNT T+NGSTDA+ALN +P+ LA AA EPDS EAGGAESD+DPSNQDYLSAPASD
Sbjct: 1 MATNTATDNGSTDANALNFNPESSPLASVAAAEPDSMEAGGAESDLDPSNQDYLSAPASD 60
Query: 61 SVPH-ESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRV 120
S H ESPNH ASDKKWPGWPGDCVFRLIVPVVKVGSIIGR+GDLIKK+CEETRARIRV
Sbjct: 61 SADHDESPNHTDASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRV 120
Query: 121 LDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVA 180
LDGAVGTPDRVVLISGKE+PEAPLSPAMDAV+R+FKRV FSENEDEAK SFCS+RLLVA
Sbjct: 121 LDGAVGTPDRVVLISGKEDPEAPLSPAMDAVIRVFKRVFLFSENEDEAKTSFCSIRLLVA 180
Query: 181 STQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELAGRNLK 230
STQAINLIGKQGSLIKSIQESTGAS+RVLSGDEMPFYAG DERMVEL G +LK
Sbjct: 181 STQAINLIGKQGSLIKSIQESTGASIRVLSGDEMPFYAGADERMVELQGESLK 233
BLAST of Carg24193 vs. ExPASy TrEMBL
Match:
A0A6J1D9V1 (RNA-binding KH domain-containing protein PEPPER OS=Momordica charantia OX=3673 GN=LOC111018213 PE=4 SV=1)
HSP 1 Score: 379.0 bits (972), Expect = 1.5e-101
Identity = 196/232 (84.48%), Postives = 209/232 (90.09%), Query Frame = 0
Query: 1 MATNTTTENGSTDADALNSSPQ---LAFEAAPEPDSTEAGGAESDIDPSNQDYLSAPASD 60
MATN ENGSTDA A+NS+PQ L AA E DSTEAGGAESD+DPSN DYLS PASD
Sbjct: 1 MATNKIAENGSTDASAINSNPQSSTLDSVAAAELDSTEAGGAESDLDPSNSDYLSVPASD 60
Query: 61 SVPHESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVL 120
S E+ NH G+SDKKWPGWPGDCVFRLIVPVVKVGSIIGR+GDLIKK+CEET+ARIRVL
Sbjct: 61 SGAQEASNHTGSSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETKARIRVL 120
Query: 121 DGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVAS 180
DGAVGTPDRVVLISGKEEPEAPLSPAMDAV+R+FKRVSGFSENED+ KASFCS+RLLVAS
Sbjct: 121 DGAVGTPDRVVLISGKEEPEAPLSPAMDAVIRVFKRVSGFSENEDDTKASFCSIRLLVAS 180
Query: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELAGRNLK 230
TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAG DERMVEL G +LK
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLK 232
BLAST of Carg24193 vs. TAIR 10
Match:
AT4G26000.1 (RNA-binding KH domain-containing protein )
HSP 1 Score: 244.2 bits (622), Expect = 1.1e-64
Identity = 120/170 (70.59%), Postives = 145/170 (85.29%), Query Frame = 0
Query: 64 PNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGAVGT 123
P+ +++++WPGWPGDCVFR+IVPV KVG+IIGR+GD IKK+CEETRARI+VLDG V T
Sbjct: 57 PDTNDSAEERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNT 116
Query: 124 PDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDE----AKASFCSVRLLVASTQ 183
PDR+VLISGKEEPEA +SPAMDAVLR+F+RVSG +N+D+ A + F SVRLLVASTQ
Sbjct: 117 PDRIVLISGKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAGSVFSSVRLLVASTQ 176
Query: 184 AINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELAGRNLK 230
AINLIGKQGSLIKSI E++GASVR+LS +E PFYA DER+V+L G LK
Sbjct: 177 AINLIGKQGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALK 226
BLAST of Carg24193 vs. TAIR 10
Match:
AT3G04610.1 (RNA-binding KH domain-containing protein )
HSP 1 Score: 170.2 bits (430), Expect = 2.0e-42
Identity = 101/237 (42.62%), Postives = 138/237 (58.23%), Query Frame = 0
Query: 4 NTTTENGSTDADALNSSPQLAFEAAPEPDSTEAGGAESDIDPSNQDYLSAPASD------ 63
N ++ S D Q F+ E A+ D+ N D + D
Sbjct: 98 NEDVQDHSQDDLQYQPQNQEQFQLQDEAHDQAQYQAQGDVQDHNGDEVQDKVEDEEGIPE 157
Query: 64 -------SVPHESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEET 123
S P E G +K+WPGWPG+ VFR++VP KVGSIIGR+GD+IKKI EET
Sbjct: 158 HLESLQKSEPEEDAT-VGGEEKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEET 217
Query: 124 RARIRVLDGAVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKR-VSGFSENEDEA-KASF 183
RARI++LDG GT +R V++SGKEEPE+ L P+MD +LR+ R V G +A S
Sbjct: 218 RARIKILDGPPGTTERAVMVSGKEEPESSLPPSMDGLLRVHMRIVDGLDGEASQAPPPSK 277
Query: 184 CSVRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELAG 226
S RLLV ++QA +LIGKQG +K+IQE++ VRVL +++P +A D+R+VE+ G
Sbjct: 278 VSTRLLVPASQAGSLIGKQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVG 333
BLAST of Carg24193 vs. TAIR 10
Match:
AT1G51580.1 (RNA-binding KH domain-containing protein )
HSP 1 Score: 87.0 bits (214), Expect = 2.2e-17
Identity = 62/201 (30.85%), Postives = 98/201 (48.76%), Query Frame = 0
Query: 60 PHESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDG 119
P+ P G ++ P + FRL+ P KVGS+IG+ G +++ + E+ A I+V D
Sbjct: 257 PNPMPEDVGPFNR--PVVEEEVAFRLLCPADKVGSLIGKGGAVVRALQNESGASIKVSDP 316
Query: 120 AVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQ 179
+ +R+++IS +E E S A D V+R+ R+ A + RLLV S
Sbjct: 317 THDSEERIIVISARENLERRHSLAQDGVMRVHNRIVEIGFEPSAAVVA----RLLVHSPY 376
Query: 180 AINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELAGRNLKGSQGS----- 239
L+GK G LI ++ +TGAS+RV + D+ Y + +V++ G NLK Q +
Sbjct: 377 IGRLLGKGGHLISEMRRATGASIRVFAKDQATKYESQHDEIVQVIG-NLKTVQDALFQIL 436
Query: 240 --------------RGSGGPP 242
+G GGPP
Sbjct: 437 CRLREAMFPGRLPFQGMGGPP 450
BLAST of Carg24193 vs. TAIR 10
Match:
AT5G15270.2 (RNA-binding KH domain-containing protein )
HSP 1 Score: 85.9 bits (211), Expect = 5.0e-17
Identity = 50/142 (35.21%), Postives = 84/142 (59.15%), Query Frame = 0
Query: 84 RLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPA 143
RL+ PV + S+IG+ G LI ++ +ETRA I+V D ++ IS +E E SP
Sbjct: 287 RLVSPVENIASVIGKGGALINQLRQETRATIKVDSSRTEGNDCLITISAREVFEDAYSPT 346
Query: 144 MDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQAINLIGKQGSLIKSIQESTGASVR 203
++AV+R+ + S E D SF + RLLV S++ ++GK G++I ++ T A++R
Sbjct: 347 IEAVMRLQPKCSDKVE-RDSGLVSF-TTRLLVPSSRIGCILGKGGAIITEMRRMTKANIR 406
Query: 204 VLSGDEMPFYAGPDERMVELAG 226
+L + +P A D+ MV+++G
Sbjct: 407 ILGKENLPKVASDDDEMVQISG 426
BLAST of Carg24193 vs. TAIR 10
Match:
AT5G15270.1 (RNA-binding KH domain-containing protein )
HSP 1 Score: 85.9 bits (211), Expect = 5.0e-17
Identity = 50/142 (35.21%), Postives = 84/142 (59.15%), Query Frame = 0
Query: 84 RLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDGAVGTPDRVVLISGKEEPEAPLSPA 143
RL+ PV + S+IG+ G LI ++ +ETRA I+V D ++ IS +E E SP
Sbjct: 287 RLVSPVENIASVIGKGGALINQLRQETRATIKVDSSRTEGNDCLITISAREVFEDAYSPT 346
Query: 144 MDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQAINLIGKQGSLIKSIQESTGASVR 203
++AV+R+ + S E D SF + RLLV S++ ++GK G++I ++ T A++R
Sbjct: 347 IEAVMRLQPKCSDKVE-RDSGLVSF-TTRLLVPSSRIGCILGKGGAIITEMRRMTKANIR 406
Query: 204 VLSGDEMPFYAGPDERMVELAG 226
+L + +P A D+ MV+++G
Sbjct: 407 ILGKENLPKVASDDDEMVQISG 426
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7020933.1 | 9.7e-132 | 100.00 | RNA-binding KH domain-containing protein PEPPER [Cucurbita argyrosperma subsp. a... | [more] |
KAG6586109.1 | 8.6e-120 | 98.69 | RNA-binding KH domain-containing protein PEPPER, partial [Cucurbita argyrosperma... | [more] |
XP_022965514.1 | 3.0e-117 | 96.94 | RNA-binding KH domain-containing protein PEPPER-like [Cucurbita maxima] | [more] |
XP_023538336.1 | 2.0e-116 | 96.51 | RNA-binding KH domain-containing protein PEPPER-like [Cucurbita pepo subsp. pepo... | [more] |
XP_022938096.1 | 2.0e-116 | 96.07 | RNA-binding KH domain-containing protein PEPPER-like [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
Q9SZH4 | 1.5e-63 | 70.59 | RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 ... | [more] |
Q9SR13 | 2.8e-41 | 42.62 | Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV... | [more] |
F4KDN0 | 3.9e-14 | 27.03 | KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 S... | [more] |
Q5E9A3 | 1.5e-13 | 35.66 | Poly(rC)-binding protein 1 OS=Bos taurus OX=9913 GN=PCBP1 PE=2 SV=1 | [more] |
Q15365 | 1.5e-13 | 35.66 | Poly(rC)-binding protein 1 OS=Homo sapiens OX=9606 GN=PCBP1 PE=1 SV=2 | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1HR76 | 1.5e-117 | 96.94 | RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita maxima OX=3661... | [more] |
A0A6J1FC72 | 9.6e-117 | 96.07 | RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita moschata OX=36... | [more] |
A0A6J1K7W7 | 3.5e-103 | 85.84 | RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita maxima OX=3661... | [more] |
A0A6J1EV22 | 3.5e-103 | 85.84 | RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita moschata OX=36... | [more] |
A0A6J1D9V1 | 1.5e-101 | 84.48 | RNA-binding KH domain-containing protein PEPPER OS=Momordica charantia OX=3673 G... | [more] |