Carg24193 (gene) Silver-seed gourd (SMH-JMG-627) v2

InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Position :
0
Zoom :
x 1
TTTAAAATTTTATTATTTCAATAATTTACAAAAATAAAAAGAAAAAAAGAAAAAAGAAAAAAGAAAAAAAAAACCTGCATTTCCTTACTTTCTTCCTCTCTTCCTTCGTCCTCTTTAAACCTCTGAAAATCTTAACCCTAACTTCTTCCTCCTTCTTCATCCTTCTTCATCTTCCTCCATGGCCACCAACACAACTACAGAGAATGGCTCCACTGATGCCGACGCCCTCAATTCAAGCCCCCAACTTGCCTTTGAAGCTGCTCCCGAACCGGACTCTACGGAAGCCGGTGGCGCCGAATCCGACATTGATCCCTCTAACCAAGACTATTTATCGGCACCCGCTTCGGATTCTGTACCTCACGAAAGTCCCAATCATGCTGGCGCTTCCGATAAAAAGTGGCCTGGATGGCCCGGAGACTGCGTCTTCCGGCTTATTGTACCGGTCGTTAAAGTCGGCAGCATTATTGGGCGCAGGGGCGATCTTATCAAGAAGATCTGTGAGGAAACTAGGGCTAGAATTCGTGTTCTTGATGGTGCTGTTGGCACTCCTGATCGCGTCGTGCTAATTTCAGGAAAGGAAGAGCCTGAGGCACCCCTTTCCCCTGCAATGGATGCAGTTTTAAGAATCTTTAAACGTGTGTCTGGATTTTCTGAGAATGAAGATGAGGCTAAAGCTTCATTCTGTTCGGTCCGGTTACTGGTGGCATCAACTCAAGCAATCAATCTAATTGGAAAGCAGGGTTCATTAATCAAATCCATACAGGAGAGTACAGGGGCTTCTGTGAGAGTTTTATCAGGAGATGAGATGCCATTCTATGCTGGTCCGGATGAGAGAATGGTGGAACTTGCAGGGAGAAACCTTAAAGGTTCTCAAGGCTCTAGAGGCAGTGGTGGGCCACCTAAGGAAGTTTTTAGTTGATCATAGTGTTCTTCCTCTGTTTGAAAAGAGTTTCAATACACCTGCCTCACAAGATCGCCAAACGGATGCCTGGGCTGACAAGTCCTCACTTCTTTCTGCATCTCAAAGTGTAATTTCCACCGAGTATCCTCCATCTTCAAAAAGAGAATCTCTGTTTCTTGACCGAGAAACTCATCTTGATTCTCATATTTCATCCTCTGGTATTTCTCTCTATGGACCAGATCGAGTGCTTCCTGCAATTCGATCATCAGGTGTTGGTCGCTCCGGTGTGCCTATTGTCACTCAGGTCACGCAGACAATGCAAATCCCGTTATCTTATGCTGAGGACATCATTGGGGTTGGAGGAGCAAATATCGCATTCATCCGTCGCAATAGTGGTGCAATCTTAACCATACAAGAGAGCAGGGGATTACCGGATGAAATCACTGTGGAAATAAAAGGCACTTCCTCACAAGTTCAGATGGCTCAACAATTAATTCAGGTAATATTTAATTTCCCCGTTTGACTATTAACTTTCTGGTTATTGCTTGTTACGGTCCATAGCGTTGCGCTGCGATACTCTGTTTCCCATGTCATGCAAAAAGTTACTTATATTTCATTGTACAACTGTAACGGCCCAGATCCACCGCTAGCAGATATTGTCATCTTTGGGCTTTCCCTTTCGGGCTTCCCCTCAAGGCTTTAAAACGCGTCTGCTAGGGAAAGGTTTCCACTCTCTTATAAGGGTGTTTTGTTCT2004006008001000120014001600Expect = 6.2E-11 / Score = 52.3Expect = 0.009 / Score = 25.2Expect = 1.8E-11 / Score = 43.7Expect = 5.2E-9 / Score = 35.8Expect = 4.0E-29 / Score = 103.4Score = Score = Score = Score = Score = Score = 11.594319Score = 14.193756Expect = 2.08047E-14 / Score = 64.0347Expect = 5.12724E-21 / Score = 81.3687Score = Score = SequenceSM00322PF00013G3DSA:3.30.310.210mobidb-litemobidb-litemobidb-litePTHR10288:SF277PTHR10288PS50084PS50084cd02396cd02396SSF54791SSF54791
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004087K Homology domainSMARTSM00322kh_6coord: 167..233
e-value: 0.009
score: 25.2
coord: 79..152
e-value: 6.2E-11
score: 52.3
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 171..227
e-value: 5.2E-9
score: 35.8
coord: 83..135
e-value: 1.8E-11
score: 43.7
NoneNo IPR availableGENE3D3.30.310.210coord: 80..234
e-value: 4.0E-29
score: 103.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..19
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 226..246
NoneNo IPR availablePANTHERPTHR10288:SF277RNA-BINDING KH DOMAIN-CONTAINING PROTEIN PEPPERcoord: 69..229
NoneNo IPR availablePANTHERPTHR10288KH DOMAIN CONTAINING RNA BINDING PROTEINcoord: 69..229
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 168..225
score: 11.594319
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 80..147
score: 14.193756
NoneNo IPR availableCDDcd02396PCBP_like_KHcoord: 170..225
e-value: 2.08047E-14
score: 64.0347
NoneNo IPR availableCDDcd02396PCBP_like_KHcoord: 82..151
e-value: 5.12724E-21
score: 81.3687
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 165..226
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 74..155