Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAACATCCTTCCTATCAACAGCGAACACGTTCCATTCTTCCACACCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCATCTCCATTGTTGAGATCAAGATTTTCTTGCCTTAATTGCCGTAATAACGCTAGAAGACTGGTAATCTGCAAGGGAAATAACGACCCACCATCGCAAATCCCAACTTTAACCAAGAGAAGCCTCTCAATCTGCTTCATTTCCAGTTTCATTTTCCCTCTGGTGGGTCAAGGATTCTCCGATGCAAATGCTGCGATTCTTGAAGCCGATGATGATGAAGAGCTTCTGGAAAAGGTGAAGAAGGATAGAAAGAAGAGGCTGGAAAGACAAGGGGTTATCAGCTCCGCCAATAAAGAAAAAGGTTTTGTATGCACTCTATGTGTTTGTGTTTAGTTCTCTGTGAAACTTCCAACTTCAGAATTTGATCCCATTACTGAATACTTTGACTGATTGGTTGTGTTTGTATACTAGAGTTCTTAAGCCAAGTATATGTTTGTAATGTGGGGTTCCTGATGTCCTGGCTGTAGGTTTGCTAATCCTATGGGATACATAAATCCAAGTTCTTCAACCTATGTAGTTACTTTTGCAAACTACAAACCCACAAGTCAAAACTCACCCATATAAATTTAGGTTTCCATAACTCAATCCTTCTTAGAATAATCCATGTAACGGTTGAAGCCCGCCGCTAGGCTTCCCCTCGAGGTTTTTAAAGTGTGTCTGCTATAGAGAGGTTTTCACACCTTTATAAAGAATGGTTCGTTTTCCTCCCCAACCGATGTGGGATCTCGCAATCCACTCCCTTCAGGACCCAACGTCCTTGTTGGCACACCGCCTCGTGTACACACCTCTTTGGGGCTCAGCCTCCTCATTAGCACATCGCCCAGTGTCTGGTTTTGATACCATTTGTAACGGTCCAAGCCCGCGACTAGAAGATATTGTCCTATTTGGGCTTCTCCTCAAAGTTTTTAAAGCGCGTTTGCTAGGGAGAGGATTCACACCCTTACAAAGAATGCTTCGTTCTCCTCCCCAACCAATGTGGGATCTCACAATCCACCCCCCTTTGGGGCTTAGCGTCCTTGTTGGCACATCGCCTCATGTCCACCCCCCTTCGGGGCTCAACCTCCTTGCTGGTACATCATCCGATGTCTAGCTCTAATACCATTTGTAACGACCCAAGCCCACCGCTAGCAGACATTGTCCGCTTTGGGCTTTTCCTTCTGGGCTTCCCCTCAAGGTTTTTAAAACGCGTCTTAGGGAGAAGTTTTCACACCCTTGTAAAGAATGCTTCATTCTCCTCCCTAACTGACGTGGCATCTCACAATCCAAATGCAGGCTATAAAGCTTTTCAACCTCATTTGAAGCAAAGCTATACTTAATAAAACATAGAGTCTGGTCTAGGTTTTTGAAATCATGAGGCTTAATTCTTCATGGGAGTGGATCATAGAGTTTATCATAAGCTAGCAGAGTTGAGCTATGAGAAAGGGCCTCTACAACAAAAGCTGAAACCTTGCCATAATCATTCGGAATTTTGCAGGATACCTCCAGGAAGTTGTGTACAAGCTGAGCAAAGTTGGTCAAGCCATTGATAACAATGACTTCTCAACAGCAAGTTCAGTTCTTGGGGGTAGTAATGATGCAGATTGGGTTCGGAATGCCAACTTAGCCTTCAACAAGGTTAGCAAAATAGATTGAACATTTCATGAGAAGTGAAATGATTCTTCGAGGAATTTCTAACTTTTTTGTGTAATTTCTTGAGCAGCTGAGCTCAAGTCCTGAAGAGAAATCTGAAGTGGACGCATTCAACTCCTCTCTAGCTTCATTAATCTCATCAGGTGGTTAAAACAGGGTAAAACTACTAAGAACTGAAAGGTTTAACCCTCCACAGAGTTCTAAACAATATAACATTTTTGCATTGCAGTGACTCAGAATGATGTCCAATCCTCTAAAACTGCCTTTGTAGCTTCTGCCAGTGCACTTGAGAAATGGACCGCCTTGGCAGGGCTTGTTGGACAGCTGAAGGGGCTTTGAGTGGAAAACAACCATCTCTACTGATCTCATTTCTACTGTATTTTTAGTCTCCTCACCTCGTAAATCATTGCAGTTTAAGGTCAAGAAGCTGATTTTTCTTGTCATCTTCTTACTGAGTTTCTGGTGTCAATGTTACTGAACTTTGAATGGATAGATTCCATTGTTTAGTATGAATGTTATTGTTGGTTTATCCAAGAAAACCTACACATCTGTTTATGAACAAAGCAAGATATCAGTTCAGTTAGGATTACCTAAAACACTGCAGAACTTTGGATCATTAAAATGGTGGTTGACAAGAATCAGGAGTTCAAGAACATCCTACAGTTTTTTTTCTTTTCCAGATGTTCATGGAGCTCTCGATGGTCTGAATCCTCTTGGATTATTTGGATAACTTTCACTATTCTAGTAAAAACAGATGGTATGCATTAGGAGTTTTTTAAATTTGGGCTATTA
mRNA sequence
ATGGCAACATCCTTCCTATCAACAGCGAACACGTTCCATTCTTCCACACCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCATCTCCATTGTTGAGATCAAGATTTTCTTGCCTTAATTGCCGTAATAACGCTAGAAGACTGGTAATCTGCAAGGGAAATAACGACCCACCATCGCAAATCCCAACTTTAACCAAGAGAAGCCTCTCAATCTGCTTCATTTCCAGTTTCATTTTCCCTCTGGTGGGTCAAGGATTCTCCGATGCAAATGCTGCGATTCTTGAAGCCGATGATGATGAAGAGCTTCTGGAAAAGGTGAAGAAGGATAGAAAGAAGAGGCTGGAAAGACAAGGGGTTATCAGCTCCGCCAATAAAGAAAAAGGATACCTCCAGGAAGTTGTGTACAAGCTGAGCAAAGTTGGTCAAGCCATTGATAACAATGACTTCTCAACAGCAAGTTCAGTTCTTGGGGGTAGTAATGATGCAGATTGGGTTCGGAATGCCAACTTAGCCTTCAACAAGCTGAGCTCAAGTCCTGAAGAGAAATCTGAAGTGGACGCATTCAACTCCTCTCTAGCTTCATTAATCTCATCAGTGACTCAGAATGATGTCCAATCCTCTAAAACTGCCTTTGTAGCTTCTGCCAGTGCACTTGAGAAATGGACCGCCTTGGCAGGGCTTGTTGGACAGCTGAAGGGGCTTTGAGTGGAAAACAACCATCTCTACTGATCTCATTTCTACTGTATTTTTAGTCTCCTCACCTCGTAAATCATTGCAGTTTAAGGTCAAGAAGCTGATTTTTCTTGTCATCTTCTTACTGAGTTTCTGGTGTCAATGTTACTGAACTTTGAATGGATAGATTCCATTGTTTAGTATGAATGTTATTGTTGGTTTATCCAAGAAAACCTACACATCTGTTTATGAACAAAGCAAGATATCAGTTCAGTTAGGATTACCTAAAACACTGCAGAACTTTGGATCATTAAAATGGTGGTTGACAAGAATCAGGAGTTCAAGAACATCCTACAGTTTTTTTTCTTTTCCAGATGTTCATGGAGCTCTCGATGGTCTGAATCCTCTTGGATTATTTGGATAACTTTCACTATTCTAGTAAAAACAGATGGTATGCATTAGGAGTTTTTTAAATTTGGGCTATTA
Coding sequence (CDS)
ATGGCAACATCCTTCCTATCAACAGCGAACACGTTCCATTCTTCCACACCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCATCTCCATTGTTGAGATCAAGATTTTCTTGCCTTAATTGCCGTAATAACGCTAGAAGACTGGTAATCTGCAAGGGAAATAACGACCCACCATCGCAAATCCCAACTTTAACCAAGAGAAGCCTCTCAATCTGCTTCATTTCCAGTTTCATTTTCCCTCTGGTGGGTCAAGGATTCTCCGATGCAAATGCTGCGATTCTTGAAGCCGATGATGATGAAGAGCTTCTGGAAAAGGTGAAGAAGGATAGAAAGAAGAGGCTGGAAAGACAAGGGGTTATCAGCTCCGCCAATAAAGAAAAAGGATACCTCCAGGAAGTTGTGTACAAGCTGAGCAAAGTTGGTCAAGCCATTGATAACAATGACTTCTCAACAGCAAGTTCAGTTCTTGGGGGTAGTAATGATGCAGATTGGGTTCGGAATGCCAACTTAGCCTTCAACAAGCTGAGCTCAAGTCCTGAAGAGAAATCTGAAGTGGACGCATTCAACTCCTCTCTAGCTTCATTAATCTCATCAGTGACTCAGAATGATGTCCAATCCTCTAAAACTGCCTTTGTAGCTTCTGCCAGTGCACTTGAGAAATGGACCGCCTTGGCAGGGCTTGTTGGACAGCTGAAGGGGCTTTGA
Protein sequence
MATSFLSTANTFHSSTPSSSSSSSSSSSSSPLLRSRFSCLNCRNNARRLVICKGNNDPPSQIPTLTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQGVISSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGGSNDADWVRNANLAFNKLSSSPEEKSEVDAFNSSLASLISSVTQNDVQSSKTAFVASASALEKWTALAGLVGQLKGL
Homology
BLAST of Carg10914 vs. NCBI nr
Match:
KAG7030378.1 (Thylakoid lumenal 16.5 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 424.9 bits (1091), Expect = 4.6e-115
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0
Query: 1 MATSFLSTANTFHSSTPSSSSSSSSSSSSSPLLRSRFSCLNCRNNARRLVICKGNNDPPS 60
MATSFLSTANTFHSSTPSSSSSSSSSSSSSPLLRSRFSCLNCRNNARRLVICKGNNDPPS
Sbjct: 1 MATSFLSTANTFHSSTPSSSSSSSSSSSSSPLLRSRFSCLNCRNNARRLVICKGNNDPPS 60
Query: 61 QIPTLTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQGV 120
QIPTLTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQGV
Sbjct: 61 QIPTLTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQGV 120
Query: 121 ISSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGGSNDADWVRNANLAFNKLSSSP 180
ISSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGGSNDADWVRNANLAFNKLSSSP
Sbjct: 121 ISSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGGSNDADWVRNANLAFNKLSSSP 180
Query: 181 EEKSEVDAFNSSLASLISSVTQNDVQSSKTAFVASASALEKWTALAGLVGQLKGL 236
EEKSEVDAFNSSLASLISSVTQNDVQSSKTAFVASASALEKWTALAGLVGQLKGL
Sbjct: 181 EEKSEVDAFNSSLASLISSVTQNDVQSSKTAFVASASALEKWTALAGLVGQLKGL 235
BLAST of Carg10914 vs. NCBI nr
Match:
KAG6599393.1 (Thylakoid lumenal 16.5 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 420.2 bits (1079), Expect = 1.1e-113
Identity = 235/236 (99.58%), Postives = 235/236 (99.58%), Query Frame = 0
Query: 1 MATSFLSTANTFHSSTPSSSSSSSSSSSSS-PLLRSRFSCLNCRNNARRLVICKGNNDPP 60
MATSFLSTANTFHSSTPSSSSSSSSSSSSS PLLRSRFSCLNCRNNARRLVICKGNNDPP
Sbjct: 1 MATSFLSTANTFHSSTPSSSSSSSSSSSSSPPLLRSRFSCLNCRNNARRLVICKGNNDPP 60
Query: 61 SQIPTLTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQG 120
SQIPTLTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQG
Sbjct: 61 SQIPTLTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQG 120
Query: 121 VISSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGGSNDADWVRNANLAFNKLSSS 180
VISSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGGSNDADWVRNANLAFNKLSSS
Sbjct: 121 VISSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGGSNDADWVRNANLAFNKLSSS 180
Query: 181 PEEKSEVDAFNSSLASLISSVTQNDVQSSKTAFVASASALEKWTALAGLVGQLKGL 236
PEEKSEVDAFNSSLASLISSVTQNDVQSSKTAFVASASALEKWTALAGLVGQLKGL
Sbjct: 181 PEEKSEVDAFNSSLASLISSVTQNDVQSSKTAFVASASALEKWTALAGLVGQLKGL 236
BLAST of Carg10914 vs. NCBI nr
Match:
XP_022946074.1 (thylakoid lumenal 16.5 kDa protein, chloroplastic [Cucurbita moschata])
HSP 1 Score: 413.7 bits (1062), Expect = 1.1e-111
Identity = 233/236 (98.73%), Postives = 233/236 (98.73%), Query Frame = 0
Query: 1 MATSFLSTANTFHSSTPSSSSSSSSSSSSS-PLLRSRFSCLNCRNNARRLVICKGNNDPP 60
MATSFLSTANTFHSSTPSSSSSSSSSSSSS PLLRSRFSCLN RNNARRLVICKGNNDPP
Sbjct: 1 MATSFLSTANTFHSSTPSSSSSSSSSSSSSPPLLRSRFSCLNYRNNARRLVICKGNNDPP 60
Query: 61 SQIPTLTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQG 120
SQIPTLTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQG
Sbjct: 61 SQIPTLTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQG 120
Query: 121 VISSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGGSNDADWVRNANLAFNKLSSS 180
VISSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGGSNDADWVRNANLAFNKLSSS
Sbjct: 121 VISSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGGSNDADWVRNANLAFNKLSSS 180
Query: 181 PEEKSEVDAFNSSLASLISSVTQNDVQSSKTAFVASASALEKWTALAGLVGQLKGL 236
PEEKSEVDAFNSSLASLISSVTQNDVQSSKTAFVA ASALEKWTALAGLVGQLKGL
Sbjct: 181 PEEKSEVDAFNSSLASLISSVTQNDVQSSKTAFVALASALEKWTALAGLVGQLKGL 236
BLAST of Carg10914 vs. NCBI nr
Match:
XP_023545851.1 (thylakoid lumenal 16.5 kDa protein, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo] >XP_023545852.1 thylakoid lumenal 16.5 kDa protein, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo] >XP_023545854.1 thylakoid lumenal 16.5 kDa protein, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 413.3 bits (1061), Expect = 1.4e-111
Identity = 230/235 (97.87%), Postives = 230/235 (97.87%), Query Frame = 0
Query: 1 MATSFLSTANTFHSSTPSSSSSSSSSSSSSPLLRSRFSCLNCRNNARRLVICKGNNDPPS 60
MATSFLSTANTFHSSTP SSSSSSSSS PLLRSRFSCLNCRNNARRLVICKGNNDPPS
Sbjct: 1 MATSFLSTANTFHSSTP---SSSSSSSSSPPLLRSRFSCLNCRNNARRLVICKGNNDPPS 60
Query: 61 QIPTLTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQGV 120
QIPTLTKRSLSICFIS FIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQGV
Sbjct: 61 QIPTLTKRSLSICFISGFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQGV 120
Query: 121 ISSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGGSNDADWVRNANLAFNKLSSSP 180
ISSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGGSNDADWVRNANLAFNKLSSSP
Sbjct: 121 ISSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGGSNDADWVRNANLAFNKLSSSP 180
Query: 181 EEKSEVDAFNSSLASLISSVTQNDVQSSKTAFVASASALEKWTALAGLVGQLKGL 236
EEKSEVDAFNSSLASLISSVTQNDVQSSKTAFVASASALEKWTALAGLVGQLKGL
Sbjct: 181 EEKSEVDAFNSSLASLISSVTQNDVQSSKTAFVASASALEKWTALAGLVGQLKGL 232
BLAST of Carg10914 vs. NCBI nr
Match:
XP_022999175.1 (thylakoid lumenal 16.5 kDa protein, chloroplastic [Cucurbita maxima])
HSP 1 Score: 413.3 bits (1061), Expect = 1.4e-111
Identity = 228/235 (97.02%), Postives = 233/235 (99.15%), Query Frame = 0
Query: 1 MATSFLSTANTFHSSTPSSSSSSSSSSSSSPLLRSRFSCLNCRNNARRLVICKGNNDPPS 60
MATSFLSTANTFHSS+PSSSSSSSSSSSS PLLRSRFSCLNCRNNARR VICKGNNDPPS
Sbjct: 1 MATSFLSTANTFHSSSPSSSSSSSSSSSSPPLLRSRFSCLNCRNNARRSVICKGNNDPPS 60
Query: 61 QIPTLTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQGV 120
+IP+LTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQGV
Sbjct: 61 KIPSLTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQGV 120
Query: 121 ISSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGGSNDADWVRNANLAFNKLSSSP 180
ISSANKEKGYLQEVV+KLSKVGQAIDNNDFSTASSVLGGSNDADWVRNANLAFNKLS+SP
Sbjct: 121 ISSANKEKGYLQEVVFKLSKVGQAIDNNDFSTASSVLGGSNDADWVRNANLAFNKLSTSP 180
Query: 181 EEKSEVDAFNSSLASLISSVTQNDVQSSKTAFVASASALEKWTALAGLVGQLKGL 236
EEKSEVDAFNSSLASLISSVTQNDVQSSKTAFVASASALEKWTALAGLVGQLKGL
Sbjct: 181 EEKSEVDAFNSSLASLISSVTQNDVQSSKTAFVASASALEKWTALAGLVGQLKGL 235
BLAST of Carg10914 vs. ExPASy Swiss-Prot
Match:
O22773 (Thylakoid lumenal 16.5 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g02530 PE=1 SV=3)
HSP 1 Score: 193.4 bits (490), Expect = 3.0e-48
Identity = 132/240 (55.00%), Postives = 161/240 (67.08%), Query Frame = 0
Query: 1 MATSFL--STANTFHSSTPSSSSSSSSSSSSSPLLRSRFSCLNCRNNARRLVICKGNNDP 60
MA S L ST N F S+T SSS + + S N +N ++ K
Sbjct: 1 MAKSLLCSSTLNPFFSTTLSSSKKNQIAYSG-----------NSKNQTSSSLLWK----- 60
Query: 61 PSQIPTLTKRSLSICFISSFI-FPLVG--QGFSDANAAILEADDDEELLEKVKKDRKKRL 120
+R LS+ F+SS + LV + DANAAILEADDDEELLEKVK+DRKKR+
Sbjct: 61 --------RRELSLGFMSSLVAIGLVSNDRRRHDANAAILEADDDEELLEKVKQDRKKRI 120
Query: 121 ERQGVISSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGGSNDADWVRNANLAFNK 180
ERQ V++SA KEKGYLQ++VYKLSKVGQAI+NND A VLG D +WV+ NLAF K
Sbjct: 121 ERQAVLNSAVKEKGYLQDLVYKLSKVGQAIENNDLPAAGLVLGKGIDTEWVKTVNLAFTK 180
Query: 181 LSSSPEEKSEVDAFNSSLASLISSVTQNDVQSSKTAFVASASALEKWTALAGLVGQLKGL 236
LS+SPEE +EV+AFNSSLASLI+SV +ND++SSK AFV+SA A EKWT L GL+ QLKGL
Sbjct: 181 LSTSPEENTEVEAFNSSLASLITSVNKNDIESSKLAFVSSAGAFEKWTTLTGLLEQLKGL 216
BLAST of Carg10914 vs. ExPASy TrEMBL
Match:
A0A6J1G2S1 (thylakoid lumenal 16.5 kDa protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111450272 PE=4 SV=1)
HSP 1 Score: 413.7 bits (1062), Expect = 5.2e-112
Identity = 233/236 (98.73%), Postives = 233/236 (98.73%), Query Frame = 0
Query: 1 MATSFLSTANTFHSSTPSSSSSSSSSSSSS-PLLRSRFSCLNCRNNARRLVICKGNNDPP 60
MATSFLSTANTFHSSTPSSSSSSSSSSSSS PLLRSRFSCLN RNNARRLVICKGNNDPP
Sbjct: 1 MATSFLSTANTFHSSTPSSSSSSSSSSSSSPPLLRSRFSCLNYRNNARRLVICKGNNDPP 60
Query: 61 SQIPTLTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQG 120
SQIPTLTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQG
Sbjct: 61 SQIPTLTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQG 120
Query: 121 VISSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGGSNDADWVRNANLAFNKLSSS 180
VISSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGGSNDADWVRNANLAFNKLSSS
Sbjct: 121 VISSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGGSNDADWVRNANLAFNKLSSS 180
Query: 181 PEEKSEVDAFNSSLASLISSVTQNDVQSSKTAFVASASALEKWTALAGLVGQLKGL 236
PEEKSEVDAFNSSLASLISSVTQNDVQSSKTAFVA ASALEKWTALAGLVGQLKGL
Sbjct: 181 PEEKSEVDAFNSSLASLISSVTQNDVQSSKTAFVALASALEKWTALAGLVGQLKGL 236
BLAST of Carg10914 vs. ExPASy TrEMBL
Match:
A0A6J1KEL3 (thylakoid lumenal 16.5 kDa protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111493636 PE=4 SV=1)
HSP 1 Score: 413.3 bits (1061), Expect = 6.8e-112
Identity = 228/235 (97.02%), Postives = 233/235 (99.15%), Query Frame = 0
Query: 1 MATSFLSTANTFHSSTPSSSSSSSSSSSSSPLLRSRFSCLNCRNNARRLVICKGNNDPPS 60
MATSFLSTANTFHSS+PSSSSSSSSSSSS PLLRSRFSCLNCRNNARR VICKGNNDPPS
Sbjct: 1 MATSFLSTANTFHSSSPSSSSSSSSSSSSPPLLRSRFSCLNCRNNARRSVICKGNNDPPS 60
Query: 61 QIPTLTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQGV 120
+IP+LTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQGV
Sbjct: 61 KIPSLTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQGV 120
Query: 121 ISSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGGSNDADWVRNANLAFNKLSSSP 180
ISSANKEKGYLQEVV+KLSKVGQAIDNNDFSTASSVLGGSNDADWVRNANLAFNKLS+SP
Sbjct: 121 ISSANKEKGYLQEVVFKLSKVGQAIDNNDFSTASSVLGGSNDADWVRNANLAFNKLSTSP 180
Query: 181 EEKSEVDAFNSSLASLISSVTQNDVQSSKTAFVASASALEKWTALAGLVGQLKGL 236
EEKSEVDAFNSSLASLISSVTQNDVQSSKTAFVASASALEKWTALAGLVGQLKGL
Sbjct: 181 EEKSEVDAFNSSLASLISSVTQNDVQSSKTAFVASASALEKWTALAGLVGQLKGL 235
BLAST of Carg10914 vs. ExPASy TrEMBL
Match:
A0A5A7V8J2 (Thylakoid lumenal 16.5 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00360 PE=4 SV=1)
HSP 1 Score: 380.2 bits (975), Expect = 6.3e-102
Identity = 211/235 (89.79%), Postives = 225/235 (95.74%), Query Frame = 0
Query: 1 MATSFLSTANTFHSSTPSSSSSSSSSSSSSPLLRSRFSCLNCRNNARRLVICKGNNDPPS 60
MATSFLSTANTFHSSTP SSSSSSSS SS PLLRSRF CL C NN +RLVICK ++DPPS
Sbjct: 1 MATSFLSTANTFHSSTP-SSSSSSSSYSSPPLLRSRFGCLYCHNNTKRLVICKSSSDPPS 60
Query: 61 QIPTLTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQGV 120
+IP LTKR+LSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLE+QGV
Sbjct: 61 KIPALTKRTLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLEKQGV 120
Query: 121 ISSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGGSNDADWVRNANLAFNKLSSSP 180
ISSANKEKGYLQE+VYKLSKVGQAID+NDF+TASSVLGGS+DADWV+NANLAFNKLSSSP
Sbjct: 121 ISSANKEKGYLQELVYKLSKVGQAIDDNDFTTASSVLGGSSDADWVQNANLAFNKLSSSP 180
Query: 181 EEKSEVDAFNSSLASLISSVTQNDVQSSKTAFVASASALEKWTALAGLVGQLKGL 236
EEKSEVDAFNSSLASLISSVT++DV+SSKTAFVASASA EKWTALAGLVGQLKGL
Sbjct: 181 EEKSEVDAFNSSLASLISSVTKSDVESSKTAFVASASAFEKWTALAGLVGQLKGL 234
BLAST of Carg10914 vs. ExPASy TrEMBL
Match:
A0A1S3C541 (thylakoid lumenal 16.5 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497128 PE=4 SV=1)
HSP 1 Score: 380.2 bits (975), Expect = 6.3e-102
Identity = 211/235 (89.79%), Postives = 225/235 (95.74%), Query Frame = 0
Query: 1 MATSFLSTANTFHSSTPSSSSSSSSSSSSSPLLRSRFSCLNCRNNARRLVICKGNNDPPS 60
MATSFLSTANTFHSSTP SSSSSSSS SS PLLRSRF CL C NN +RLVICK ++DPPS
Sbjct: 1 MATSFLSTANTFHSSTP-SSSSSSSSYSSPPLLRSRFGCLYCHNNTKRLVICKSSSDPPS 60
Query: 61 QIPTLTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQGV 120
+IP LTKR+LSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLE+QGV
Sbjct: 61 KIPALTKRTLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLEKQGV 120
Query: 121 ISSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGGSNDADWVRNANLAFNKLSSSP 180
ISSANKEKGYLQE+VYKLSKVGQAID+NDF+TASSVLGGS+DADWV+NANLAFNKLSSSP
Sbjct: 121 ISSANKEKGYLQELVYKLSKVGQAIDDNDFTTASSVLGGSSDADWVQNANLAFNKLSSSP 180
Query: 181 EEKSEVDAFNSSLASLISSVTQNDVQSSKTAFVASASALEKWTALAGLVGQLKGL 236
EEKSEVDAFNSSLASLISSVT++DV+SSKTAFVASASA EKWTALAGLVGQLKGL
Sbjct: 181 EEKSEVDAFNSSLASLISSVTKSDVESSKTAFVASASAFEKWTALAGLVGQLKGL 234
BLAST of Carg10914 vs. ExPASy TrEMBL
Match:
A0A0A0LI29 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006840 PE=4 SV=1)
HSP 1 Score: 379.4 bits (973), Expect = 1.1e-101
Identity = 211/238 (88.66%), Postives = 224/238 (94.12%), Query Frame = 0
Query: 1 MATSFLSTANTFHSSTPSSSSSSSSSSSS---SPLLRSRFSCLNCRNNARRLVICKGNND 60
MAT+FLSTANTFHSSTPSS SSSSSSSSS PL+RSRF CL C NN +RLVICK ++D
Sbjct: 1 MATAFLSTANTFHSSTPSSPSSSSSSSSSYFTPPLIRSRFGCLYCHNNTKRLVICKSSSD 60
Query: 61 PPSQIPTLTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLER 120
PPS+IP LTKR+LSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLE+
Sbjct: 61 PPSKIPALTKRTLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLEK 120
Query: 121 QGVISSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGGSNDADWVRNANLAFNKLS 180
QGVISSANKEKGYLQE+VYKLSKVGQAIDNNDFSTASSVLGGS+DADWV+ AN AFNKLS
Sbjct: 121 QGVISSANKEKGYLQELVYKLSKVGQAIDNNDFSTASSVLGGSSDADWVKKANSAFNKLS 180
Query: 181 SSPEEKSEVDAFNSSLASLISSVTQNDVQSSKTAFVASASALEKWTALAGLVGQLKGL 236
SSPEEKSEVDAFNSSLASLISSVT+NDV+SSKTAFVASASA EKWTALAGLVGQLKGL
Sbjct: 181 SSPEEKSEVDAFNSSLASLISSVTKNDVESSKTAFVASASAFEKWTALAGLVGQLKGL 238
BLAST of Carg10914 vs. TAIR 10
Match:
AT4G02530.1 (chloroplast thylakoid lumen protein )
HSP 1 Score: 193.4 bits (490), Expect = 2.1e-49
Identity = 132/240 (55.00%), Postives = 161/240 (67.08%), Query Frame = 0
Query: 1 MATSFL--STANTFHSSTPSSSSSSSSSSSSSPLLRSRFSCLNCRNNARRLVICKGNNDP 60
MA S L ST N F S+T SSS + + S N +N ++ K
Sbjct: 1 MAKSLLCSSTLNPFFSTTLSSSKKNQIAYSG-----------NSKNQTSSSLLWK----- 60
Query: 61 PSQIPTLTKRSLSICFISSFI-FPLVG--QGFSDANAAILEADDDEELLEKVKKDRKKRL 120
+R LS+ F+SS + LV + DANAAILEADDDEELLEKVK+DRKKR+
Sbjct: 61 --------RRELSLGFMSSLVAIGLVSNDRRRHDANAAILEADDDEELLEKVKQDRKKRI 120
Query: 121 ERQGVISSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGGSNDADWVRNANLAFNK 180
ERQ V++SA KEKGYLQ++VYKLSKVGQAI+NND A VLG D +WV+ NLAF K
Sbjct: 121 ERQAVLNSAVKEKGYLQDLVYKLSKVGQAIENNDLPAAGLVLGKGIDTEWVKTVNLAFTK 180
Query: 181 LSSSPEEKSEVDAFNSSLASLISSVTQNDVQSSKTAFVASASALEKWTALAGLVGQLKGL 236
LS+SPEE +EV+AFNSSLASLI+SV +ND++SSK AFV+SA A EKWT L GL+ QLKGL
Sbjct: 181 LSTSPEENTEVEAFNSSLASLITSVNKNDIESSKLAFVSSAGAFEKWTTLTGLLEQLKGL 216
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAG7030378.1 | 4.6e-115 | 100.00 | Thylakoid lumenal 16.5 kDa protein, chloroplastic, partial [Cucurbita argyrosper... | [more] |
| KAG6599393.1 | 1.1e-113 | 99.58 | Thylakoid lumenal 16.5 kDa protein, chloroplastic, partial [Cucurbita argyrosper... | [more] |
| XP_022946074.1 | 1.1e-111 | 98.73 | thylakoid lumenal 16.5 kDa protein, chloroplastic [Cucurbita moschata] | [more] |
| XP_023545851.1 | 1.4e-111 | 97.87 | thylakoid lumenal 16.5 kDa protein, chloroplastic isoform X1 [Cucurbita pepo sub... | [more] |
| XP_022999175.1 | 1.4e-111 | 97.02 | thylakoid lumenal 16.5 kDa protein, chloroplastic [Cucurbita maxima] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| O22773 | 3.0e-48 | 55.00 | Thylakoid lumenal 16.5 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=370... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1G2S1 | 5.2e-112 | 98.73 | thylakoid lumenal 16.5 kDa protein, chloroplastic OS=Cucurbita moschata OX=3662 ... | [more] |
| A0A6J1KEL3 | 6.8e-112 | 97.02 | thylakoid lumenal 16.5 kDa protein, chloroplastic OS=Cucurbita maxima OX=3661 GN... | [more] |
| A0A5A7V8J2 | 6.3e-102 | 89.79 | Thylakoid lumenal 16.5 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E56... | [more] |
| A0A1S3C541 | 6.3e-102 | 89.79 | thylakoid lumenal 16.5 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC... | [more] |
| A0A0A0LI29 | 1.1e-101 | 88.66 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006840 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT4G02530.1 | 2.1e-49 | 55.00 | chloroplast thylakoid lumen protein | [more] |
