Carg01264 (gene) Silver-seed gourd (SMH-JMG-627) v2

InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Position :
0
Zoom :
x 1
ATGAGATTGTATTCCGTCTGCGGCTCCATCGACGCTGTGCAGAAGTTGTTCGGCGAATGTCCTCACCGGGATTTGGTGTCTTGGACCACGCTCATTCAAGCGTTTACGAAGGCTGGGCTCTATAGGAAAGCGGTTGGAGCTTTTATGGAGATGTGTGATCTGAAGCTAAGGGCTGATGGGCGGACTCTGGTGGTTGTCCTCTCTGCTTGCTCCAACTTGGGAGACCTGAATTTGGGTCGGAAAGTGCATTCCTATATCCACCATTACATTGACGTGAATGCAGATGTATTTGTTGGCAATGCCTTGTTAGATATGTACTTGAAATGTGATGATTCGAACTCTGCTTACAAAGTGTTCGACGAAATGCCTGTGCGAAATGTGGTTACTTGGAATGCTATGATTTCGGGGTTGGCTTATCAAGGCCGGTACAAGGAAGCTCTGGACATGTTCCGTAGGATGCAAAGAACAGGGCCCAAGCCAGACGAGGTTACGTTAGTAGGGGTTTTGAACTCTTGCGCGAACCTTGGAGTTCTTGAGTTGGGTAAGTGGGTTCATGCATACATGCGTAGAAATCATATTTTGACTGATAAATTTGTTGGGAATGCACTTCTTGATATGTATGCAAAATGTGGAAGGATAGACGAAGCTTTTAGGGTGTTTGAGAGCATGAAAAGAAGGGATGTCTATTCATACACAGCCATGATTGTTGGGCTGGCCTTGCATGGTGAAGCAAACTGGGCATTCCAGGTCTTCTCCAGGATGTTAAGAGAAGGTGTTGAGCCAAACGAAGTAACATTTTTAGGTCTTCTCATGGCTTGCAGCCACAGTGGATTAGTTTCCGATGGCAAGAAGTACTTTTTCGACATGTCGAATACATATAAGCTTAGACCTCAAGCAGAGCATTATGGCTGCATGATTGACCTTCTTGGGCGTGCAGGTTTAGTGAAGGAAGCAGAAGAGATTATCCACAGCATGGAAATCAGGCCAGATGCCTTCGCTTGGGGAGCTCTATTAGGGGCTTGCAGGATTCATGGAAATGTCAACCTCGGGGAAAGTGTGATGCAAAAGTTGATGAATTTAGATCCTGGTGAAGATGGTAATTACATTCTTATGACTAATTTATATTCTTCTGCTCATAGATGGAAAGATGCATTGAAATTAAGAAAGAAGATGAAAAGTAAGAAGATGAGGAAAACTCCTGGATGTAGTTTGATTGAAGTTGATGGTGTTGTTCATGAATTTCGCAAGGGTGACAAGTCACATCCAAAAAACAGAGTGATATATTCAGTATTGGAAGGAATCGCTTGTCATTTAAAGAGCTATGGGACTGTGGAACATAGTACATTTTCATGGTAG20040060080010001200Expect = 4.3E-7 / Score = 30.0Expect = 2.2E-13 / Score = 50.2Expect = 3.3E-9 / Score = 36.8Expect = 6.1E-5 / Score = 20.9Expect = 7.3E-10 / Score = 36.4Expect = 4.9E-7 / Score = 27.5Score = 9.602157Score = 10.544828Score = 13.537263Score = 11.432693Expect = 4.7E-24 / Score = 87.4Expect = 1.1E-12 / Score = 50.0Expect = 2.9E-44 / Score = 153.7Score = Score = SequencePF13041TIGR00756PF01535PS51375PS51375PS51375PS51375G3DSA:1.25.40.10G3DSA:1.25.40.10PTHR47928:SF107PTHR47928
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 24..71
e-value: 4.3E-7
score: 30.0
coord: 227..273
e-value: 3.3E-9
score: 36.8
coord: 125..174
e-value: 2.2E-13
score: 50.2
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 26..59
e-value: 6.1E-5
score: 20.9
coord: 128..162
e-value: 7.3E-10
score: 36.4
coord: 302..326
e-value: 6.0E-4
score: 17.8
coord: 229..263
e-value: 4.9E-7
score: 27.5
coord: 201..228
e-value: 1.1E-6
score: 26.4
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 370..395
e-value: 0.34
score: 11.3
coord: 301..326
e-value: 6.3E-4
score: 19.8
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 24..58
score: 9.602157
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 196..226
score: 10.544828
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 126..160
score: 13.537263
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 227..261
score: 11.432693
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 90..197
e-value: 4.7E-24
score: 87.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 201..406
e-value: 2.9E-44
score: 153.7
coord: 1..89
e-value: 1.1E-12
score: 50.0
NoneNo IPR availablePANTHERPTHR47928:SF107REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 1..449
NoneNo IPR availablePANTHERPTHR47928REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 1..449