Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAAGCCCCATGCCTACACCGCCAGTTTCTCCCCATCCTTCCATCTATGACCACATGGAGGCAAGTTGGTATGATTTTATCCCACCTACAACTGATGGACCCTTTAACCCAACTCCTCATTTGATTGCTTTGGCACTATGGTTTAGAGAACTTGGTATGTGCATTAGGGTGATCCCAACCAAGAAGCATTCCAACAAATATTCAGCAAAGAAAAAAAGAGGCTTGAGAGAATTGAGAAACCTCGAAAGCTTTATTTCCTATGATAAAAAAGCACAAAGCAAGCATAGAGAAGGGTCTTTATCGATATGACCTCTGATCTTAGTGCATTTGATTGCTTCGGTTTTGAGTTGGATTGGCAGCCTTCTTCCTAATTGCTGGGCTTTTCATTGTGATGGATCATGTTCATCTTTGATGTGCGCTTTGGCTTCTTCCATTTGGATTAAGATGGATGGATCGTGGTGCTGTTTTGTTTCAGTCCTTGCTTTTGTCAGATTGGATTATGTCTTTTCTTCATCTCTCCCTCCCTTGTACATCATTGATTGTATCTTTCTTTCTTGGGTTCTACGTTTGTTGTGTCTTTGGTTTTTTCCCCTTTTTGGATTATTTCCTATTGTACTGTTTGGATATTTCATTCATCGATAAAATTGTTTTTTACATAAAAAAAAAATGTGCATATTTTCACTTCAACCTGTCTTTCAAATAAACTAAAACAAACTTTTAGATTGAAAATGAAGATGACATTGCAGTCTAAATCAAATCAAAAGCAATTATACGAAATTATGTACTGAACGTACTCTTGTTCTCTTTCTCTGTCATGCCTGTCTTCTTTGCTTAGAAAATTTGTGACTTACTTTGTACGAAGTTGGTAATGTCATTTTCCTCTTGGTCACCCACGCTGGAGAAAATATAAAATAACTTGAGTGGCCTGTTACAATTTATCTTTTTTCATGTTTCCTTGTAATCAGAATCTCTCCCAGCTTGCATCCATCAACTACGACCTGCTTTCCAAGGGTTTGAAGGATGATCCTCCCAATCATGATGCATAAATGTGTTAATCCTCACATAACCATCGAATGCTTCCAGCTGATTGGTTCGGTGTTCGTCCTTGTTTTGTATTTGTAATGTTCTGTACATGTTCGTGTAAGTCTTTCTTAGCTCCTCTACATGCATTTACAACTTTATTTGCGATTGGTGGAGTGATTTGATCATTTTTGTAACTGCAGAGACAGAAAAATTTTAGAGGCGAAATCTTGTTCGAGATGCTCTCTTTCAAATTATAGGCGCCATCTTCAGAATCATGTGGCCTTAAGTTATCATTTTTCGTTCTACGTTTCACTTCTCTCTTCCAACTCACCTCACAGTGAGTTCAGAACTTCAATTTTCCATTGTTTAAATGGTCCCATAACTGTTTTACCCATTTTCTCAGACATTCCGTTTATTTATGTATTTATAATATATACATTGAGTTCAGAACTTCAATCTTCCATTGTTTAAATGGTTCCATAACTGTTCTACCCTTTTTCTCAGACATTCCGTATATTTATGTATTTATAATATATATTATATAACAAAGAGAAGCATCATTGTGTACAGCATTTCGTTTGGCATCCATCCTGACCATATGAAGGCAAGTTGCAATAAAATCAGAAGGCGTTTGTTTC
mRNA sequence
ATGTCAAGCCCCATGCCTACACCGCCAGTTTCTCCCCATCCTTCCATCTATGACCACATGGAGGCAAGTTGGTATGATTTTATCCCACCTACAACTGATGGACCCTTTAACCCAACTCCTCATTTGATTGCTTTGGCACTATGGTTTAGAGAACTTGGTATGTGCATTAGGAATCTCTCCCAGCTTGCATCCATCAACTACGACCTGCTTTCCAAGGGTTTGAAGGATGATCCTCCCAATCATGATGCATAAATGTGTTAATCCTCACATAACCATCGAATGCTTCCAGCTGATTGGTTCGGTGTTCGTCCTTGTTTTGTATTTGTAATGTTCTGTACATGTTCGTAGACAGAAAAATTTTAGAGGCGAAATCTTGTTCGAGATGCTCTCTTTCAAATTATAGGCGCCATCTTCAGAATCATGTGGCCTTAAGTTATCATTTTTCGTTCTACGTTTCACTTCTCTCTTCCAACTCACCTCACAGTGAGTTCAGAACTTCAATTTTCCATTGTTTAAATGGTCCCATAACTGTTTTACCCATTTTCTCAGACATTCCGTTTATTTATGTATTTATAATATATACATTGAGTTCAGAACTTCAATCTTCCATTGTTTAAATGGTTCCATAACTGTTCTACCCTTTTTCTCAGACATTCCGTATATTTATGTATTTATAATATATATTATATAACAAAGAGAAGCATCATTGTGTACAGCATTTCGTTTGGCATCCATCCTGACCATATGAAGGCAAGTTGCAATAAAATCAGAAGGCGTTTGTTTC
Coding sequence (CDS)
ATGTCAAGCCCCATGCCTACACCGCCAGTTTCTCCCCATCCTTCCATCTATGACCACATGGAGGCAAGTTGGTATGATTTTATCCCACCTACAACTGATGGACCCTTTAACCCAACTCCTCATTTGATTGCTTTGGCACTATGGTTTAGAGAACTTGGTATGTGCATTAGGAATCTCTCCCAGCTTGCATCCATCAACTACGACCTGCTTTCCAAGGGTTTGAAGGATGATCCTCCCAATCATGATGCATAA
Protein sequence
MSSPMPTPPVSPHPSIYDHMEASWYDFIPPTTDGPFNPTPHLIALALWFRELGMCIRNLSQLASINYDLLSKGLKDDPPNHDA
Homology
BLAST of CaUC04G078830 vs. NCBI nr
Match:
XP_011649519.1 (probable serine/threonine protein kinase IREH1 [Cucumis sativus] >KAE8652490.1 hypothetical protein Csa_013146 [Cucumis sativus])
HSP 1 Score: 58.2 bits (139), Expect = 4.0e-05
Identity = 26/27 (96.30%), Postives = 27/27 (100.00%), Query Frame = 0
Query: 57 RNLSQLASINYDLLSKGLKDDPPNHDA 84
+NLSQLASINYDLLSKGLKDDPPNHDA
Sbjct: 1272 KNLSQLASINYDLLSKGLKDDPPNHDA 1298
BLAST of CaUC04G078830 vs. NCBI nr
Match:
KAA0036022.1 (putative serine/threonine protein kinase IREH1 [Cucumis melo var. makuwa] >TYJ98819.1 putative serine/threonine protein kinase IREH1 [Cucumis melo var. makuwa])
HSP 1 Score: 58.2 bits (139), Expect = 4.0e-05
Identity = 26/27 (96.30%), Postives = 27/27 (100.00%), Query Frame = 0
Query: 57 RNLSQLASINYDLLSKGLKDDPPNHDA 84
+NLSQLASINYDLLSKGLKDDPPNHDA
Sbjct: 98 KNLSQLASINYDLLSKGLKDDPPNHDA 124
BLAST of CaUC04G078830 vs. NCBI nr
Match:
XP_038893957.1 (probable serine/threonine protein kinase IREH1 isoform X2 [Benincasa hispida])
HSP 1 Score: 58.2 bits (139), Expect = 4.0e-05
Identity = 26/27 (96.30%), Postives = 27/27 (100.00%), Query Frame = 0
Query: 57 RNLSQLASINYDLLSKGLKDDPPNHDA 84
+NLSQLASINYDLLSKGLKDDPPNHDA
Sbjct: 1272 KNLSQLASINYDLLSKGLKDDPPNHDA 1298
BLAST of CaUC04G078830 vs. NCBI nr
Match:
XP_008443041.1 (PREDICTED: probable serine/threonine protein kinase IREH1 [Cucumis melo])
HSP 1 Score: 58.2 bits (139), Expect = 4.0e-05
Identity = 26/27 (96.30%), Postives = 27/27 (100.00%), Query Frame = 0
Query: 57 RNLSQLASINYDLLSKGLKDDPPNHDA 84
+NLSQLASINYDLLSKGLKDDPPNHDA
Sbjct: 1272 KNLSQLASINYDLLSKGLKDDPPNHDA 1298
BLAST of CaUC04G078830 vs. NCBI nr
Match:
XP_038893956.1 (probable serine/threonine protein kinase IREH1 isoform X1 [Benincasa hispida])
HSP 1 Score: 58.2 bits (139), Expect = 4.0e-05
Identity = 26/27 (96.30%), Postives = 27/27 (100.00%), Query Frame = 0
Query: 57 RNLSQLASINYDLLSKGLKDDPPNHDA 84
+NLSQLASINYDLLSKGLKDDPPNHDA
Sbjct: 1293 KNLSQLASINYDLLSKGLKDDPPNHDA 1319
BLAST of CaUC04G078830 vs. ExPASy TrEMBL
Match:
A0A5D3BIK4 (Putative serine/threonine protein kinase IREH1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00070 PE=4 SV=1)
HSP 1 Score: 58.2 bits (139), Expect = 2.0e-05
Identity = 26/27 (96.30%), Postives = 27/27 (100.00%), Query Frame = 0
Query: 57 RNLSQLASINYDLLSKGLKDDPPNHDA 84
+NLSQLASINYDLLSKGLKDDPPNHDA
Sbjct: 98 KNLSQLASINYDLLSKGLKDDPPNHDA 124
BLAST of CaUC04G078830 vs. ExPASy TrEMBL
Match:
A0A0A0LSH8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G031190 PE=4 SV=1)
HSP 1 Score: 58.2 bits (139), Expect = 2.0e-05
Identity = 26/27 (96.30%), Postives = 27/27 (100.00%), Query Frame = 0
Query: 57 RNLSQLASINYDLLSKGLKDDPPNHDA 84
+NLSQLASINYDLLSKGLKDDPPNHDA
Sbjct: 504 KNLSQLASINYDLLSKGLKDDPPNHDA 530
BLAST of CaUC04G078830 vs. ExPASy TrEMBL
Match:
A0A1S3B6M3 (probable serine/threonine protein kinase IREH1 OS=Cucumis melo OX=3656 GN=LOC103486458 PE=4 SV=1)
HSP 1 Score: 58.2 bits (139), Expect = 2.0e-05
Identity = 26/27 (96.30%), Postives = 27/27 (100.00%), Query Frame = 0
Query: 57 RNLSQLASINYDLLSKGLKDDPPNHDA 84
+NLSQLASINYDLLSKGLKDDPPNHDA
Sbjct: 1272 KNLSQLASINYDLLSKGLKDDPPNHDA 1298
BLAST of CaUC04G078830 vs. ExPASy TrEMBL
Match:
A0A6J1G9M9 (probable serine/threonine protein kinase IREH1 OS=Cucurbita moschata OX=3662 GN=LOC111452222 PE=4 SV=1)
HSP 1 Score: 56.2 bits (134), Expect = 7.4e-05
Identity = 25/27 (92.59%), Postives = 27/27 (100.00%), Query Frame = 0
Query: 57 RNLSQLASINYDLLSKGLKDDPPNHDA 84
+NLSQLASINYDLLSKGLKDDPP+HDA
Sbjct: 1270 KNLSQLASINYDLLSKGLKDDPPDHDA 1296
BLAST of CaUC04G078830 vs. ExPASy TrEMBL
Match:
A0A6J1KF88 (probable serine/threonine protein kinase IREH1 OS=Cucurbita maxima OX=3661 GN=LOC111493337 PE=4 SV=1)
HSP 1 Score: 55.1 bits (131), Expect = 1.7e-04
Identity = 25/27 (92.59%), Postives = 26/27 (96.30%), Query Frame = 0
Query: 57 RNLSQLASINYDLLSKGLKDDPPNHDA 84
+NLSQLASINYDLLSKGLKDDPP HDA
Sbjct: 1270 KNLSQLASINYDLLSKGLKDDPPYHDA 1296
BLAST of CaUC04G078830 vs. TAIR 10
Match:
AT3G17850.1 (Protein kinase superfamily protein )
HSP 1 Score: 43.1 bits (100), Expect = 1.3e-04
Identity = 21/28 (75.00%), Postives = 24/28 (85.71%), Query Frame = 0
Query: 57 RNLSQLASINYDLLSKGLKDDP---PNH 82
+NLSQLASINYDLLSKG KD+P P+H
Sbjct: 1268 KNLSQLASINYDLLSKGWKDEPQQIPHH 1295
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_011649519.1 | 4.0e-05 | 96.30 | probable serine/threonine protein kinase IREH1 [Cucumis sativus] >KAE8652490.1 h... | [more] |
| KAA0036022.1 | 4.0e-05 | 96.30 | putative serine/threonine protein kinase IREH1 [Cucumis melo var. makuwa] >TYJ98... | [more] |
| XP_038893957.1 | 4.0e-05 | 96.30 | probable serine/threonine protein kinase IREH1 isoform X2 [Benincasa hispida] | [more] |
| XP_008443041.1 | 4.0e-05 | 96.30 | PREDICTED: probable serine/threonine protein kinase IREH1 [Cucumis melo] | [more] |
| XP_038893956.1 | 4.0e-05 | 96.30 | probable serine/threonine protein kinase IREH1 isoform X1 [Benincasa hispida] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3BIK4 | 2.0e-05 | 96.30 | Putative serine/threonine protein kinase IREH1 OS=Cucumis melo var. makuwa OX=11... | [more] |
| A0A0A0LSH8 | 2.0e-05 | 96.30 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G031190 PE=4 SV=1 | [more] |
| A0A1S3B6M3 | 2.0e-05 | 96.30 | probable serine/threonine protein kinase IREH1 OS=Cucumis melo OX=3656 GN=LOC103... | [more] |
| A0A6J1G9M9 | 7.4e-05 | 92.59 | probable serine/threonine protein kinase IREH1 OS=Cucurbita moschata OX=3662 GN=... | [more] |
| A0A6J1KF88 | 1.7e-04 | 92.59 | probable serine/threonine protein kinase IREH1 OS=Cucurbita maxima OX=3661 GN=LO... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT3G17850.1 | 1.3e-04 | 75.00 | Protein kinase superfamily protein | [more] |
