CSPI07G13880 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTTGCGTTCAAACCCTACTGCAACCCTCTCTCTTCTTCTTTTCTCCTCTTTCTTCTTCCCTCTCTTTGCCTCCGTTCAGGTATTCATCTTACATTTCTCTTCTCTTTTGTTTTTTTATGGCGTTCTTAATGGGGTTTGATTTTTATTGCTTCTTTGGTGTTTTTCAGGTGTATTCTGCGGAAGTGGAGAAAGATGACTTGGATGGACCTAAAGATCTCGGTCGATGTAGCAAGGTCAGTACGATTCCTTGTCGGCCATGGCTAGAGGTTGGTTTGGGGTTATATTGAGATTGAGATCTTTGTGCTTTTTGACTTAATAGTTTTCCTTCTTGTACATTGTTAATAGAAC ATGGGTTTGCGTTCAAACCCTACTGCAACCCTCTCTCTTCTTCTTTTCTCCTCTTTCTTCTTCCCTCTCTTTGCCTCCGTTCAGGTGTATTCTGCGGAAGTGGAGAAAGATGACTTGGATGGACCTAAAGATCTCGGTCGATGTAGCAAGGTCAGTACGATTCCTTGTCGGCCATGGCTAGAGGTTGGTTTGGGGTTATATTGAGATTGAGATCTTTGTGCTTTTTGACTTAATAGTTTTCCTTCTTGTACATTGTTAATAGAAC ATGGGTTTGCGTTCAAACCCTACTGCAACCCTCTCTCTTCTTCTTTTCTCCTCTTTCTTCTTCCCTCTCTTTGCCTCCGTTCAGGTGTATTCTGCGGAAGTGGAGAAAGATGACTTGGATGGACCTAAAGATCTCGGTCGATGTAGCAAGGTCAGTACGATTCCTTGTCGGCCATGGCTAGAGGTTGGTTTGGGGTTATATTGA MGLRSNPTATLSLLLFSSFFFPLFASVQVYSAEVEKDDLDGPKDLGRCSKVSTIPCRPWLEVGLGLY* Homology
BLAST of CSPI07G13880 vs. ExPASy TrEMBL
Match: A0A0A0K4H3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G336440 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 8.2e-18 Identity = 51/53 (96.23%), Postives = 51/53 (96.23%), Query Frame = 0
BLAST of CSPI07G13880 vs. ExPASy TrEMBL
Match: A0A0A0LMQ4 (GDT1 family protein OS=Cucumis sativus OX=3659 GN=Csa_2G074220 PE=3 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 2.8e-10 Identity = 41/55 (74.55%), Postives = 42/55 (76.36%), Query Frame = 0
BLAST of CSPI07G13880 vs. ExPASy TrEMBL
Match: A0A5A7U3P6 (GDT1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold105G00130 PE=3 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 4.1e-09 Identity = 37/55 (67.27%), Postives = 40/55 (72.73%), Query Frame = 0
BLAST of CSPI07G13880 vs. ExPASy TrEMBL
Match: A0A1S3B4E3 (LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g23330 OS=Cucumis melo OX=3656 GN=LOC103485889 PE=3 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 4.1e-09 Identity = 37/55 (67.27%), Postives = 40/55 (72.73%), Query Frame = 0
BLAST of CSPI07G13880 vs. ExPASy TrEMBL
Match: A0A6J1KA70 (putative pentatricopeptide repeat-containing protein At3g23330 OS=Cucurbita maxima OX=3661 GN=LOC111492492 PE=3 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 9.1e-09 Identity = 37/55 (67.27%), Postives = 41/55 (74.55%), Query Frame = 0
BLAST of CSPI07G13880 vs. NCBI nr
Match: KAE8646234.1 (hypothetical protein Csa_016443 [Cucumis sativus]) HSP 1 Score: 135.6 bits (340), Expect = 1.6e-28 Identity = 66/68 (97.06%), Postives = 67/68 (98.53%), Query Frame = 0
BLAST of CSPI07G13880 vs. NCBI nr
Match: KGN61261.1 (hypothetical protein Csa_006241 [Cucumis sativus]) HSP 1 Score: 73.9 bits (180), Expect = 5.8e-10 Identity = 41/55 (74.55%), Postives = 42/55 (76.36%), Query Frame = 0
BLAST of CSPI07G13880 vs. NCBI nr
Match: XP_011648996.1 (LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g23330 [Cucumis sativus]) HSP 1 Score: 73.9 bits (180), Expect = 5.8e-10 Identity = 41/55 (74.55%), Postives = 42/55 (76.36%), Query Frame = 0
BLAST of CSPI07G13880 vs. NCBI nr
Match: XP_038889550.1 (GDT1-like protein 4 [Benincasa hispida]) HSP 1 Score: 71.6 bits (174), Expect = 2.9e-09 Identity = 41/58 (70.69%), Postives = 44/58 (75.86%), Query Frame = 0
BLAST of CSPI07G13880 vs. NCBI nr
Match: XP_008441858.1 (PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g23330 [Cucumis melo]) HSP 1 Score: 70.1 bits (170), Expect = 8.4e-09 Identity = 37/55 (67.27%), Postives = 40/55 (72.73%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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