Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTACTTTCTTTCAACTTTAGATTCATTCTCTTCTTAACACTTGTTCTCGCTCTCACCTCCATTTCCACAGACGCTGCGAGAGTTCCAACACCGTATTGGGAGCAGATGTTGCCTAAGAAGTTACCCTCTCCATCGTCTGCGCCGTCCAAAGGGACAAACACCGTCGCTCCGTCTTCTTCTAAACCTATGAAAGTTAACGGGAATCTGCCAGCAAAGGACGGTAACGTTTAG
mRNA sequence
ATGTTACTTTCTTTCAACTTTAGATTCATTCTCTTCTTAACACTTGTTCTCGCTCTCACCTCCATTTCCACAGACGCTGCGAGAGTTCCAACACCGTATTGGGAGCAGATGTTGCCTAAGAAGTTACCCTCTCCATCGTCTGCGCCGTCCAAAGGGACAAACACCGTCGCTCCGTCTTCTTCTAAACCTATGAAAGTTAACGGGAATCTGCCAGCAAAGGACGGTAACGTTTAG
Coding sequence (CDS)
ATGTTACTTTCTTTCAACTTTAGATTCATTCTCTTCTTAACACTTGTTCTCGCTCTCACCTCCATTTCCACAGACGCTGCGAGAGTTCCAACACCGTATTGGGAGCAGATGTTGCCTAAGAAGTTACCCTCTCCATCGTCTGCGCCGTCCAAAGGGACAAACACCGTCGCTCCGTCTTCTTCTAAACCTATGAAAGTTAACGGGAATCTGCCAGCAAAGGACGGTAACGTTTAG
Protein sequence
MLLSFNFRFILFLTLVLALTSISTDAARVPTPYWEQMLPKKLPSPSSAPSKGTNTVAPSSSKPMKVNGNLPAKDGNV*
Homology
BLAST of CSPI07G10100 vs. ExPASy TrEMBL
Match:
A0A5D3DI56 (Glutamate-gated kainate-type ion channel receptor subunit GluR5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G003180 PE=4 SV=1)
HSP 1 Score: 143.3 bits (360), Expect = 4.3e-31
Identity = 74/77 (96.10%), Postives = 77/77 (100.00%), Query Frame = 0
Query: 1 MLLSFNFRFILFLTLVLALTSISTDAARVPTPYWEQMLPKKLPSPSSAPSKGTNTVAPSS 60
MLL+FNFRFILFLTL+LALTSIS+DAARVPTPYWEQMLPKKLPSPSSAPSKGTNTVAPSS
Sbjct: 1 MLLAFNFRFILFLTLILALTSISSDAARVPTPYWEQMLPKKLPSPSSAPSKGTNTVAPSS 60
Query: 61 SKPMKVNGNLPAKDGNV 78
SKPMKVNGNLPAKDGNV
Sbjct: 61 SKPMKVNGNLPAKDGNV 77
BLAST of CSPI07G10100 vs. ExPASy TrEMBL
Match:
A0A7N2MJW9 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)
HSP 1 Score: 75.1 bits (183), Expect = 1.5e-10
Identity = 42/77 (54.55%), Postives = 55/77 (71.43%), Query Frame = 0
Query: 1 MLLSFNFRFILFLTLVLALTSISTDAARVPTPYWEQMLPKKLPSPSSAPSKGTNTVAPSS 60
ML S+ + +LF L + S +A+R+P YWEQMLPKKLP PSS+PSKGTN+++ SS
Sbjct: 1 MLGSWRHKCLLFTLLAFIVLS---EASRLPKEYWEQMLPKKLPCPSSSPSKGTNSLSKSS 60
Query: 61 SKPMKVNGNLPAKDGNV 78
SK +K N NLP+ DG V
Sbjct: 61 SKALKANRNLPSSDGKV 74
BLAST of CSPI07G10100 vs. ExPASy TrEMBL
Match:
W9S9P5 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_012616 PE=4 SV=1)
HSP 1 Score: 74.3 bits (181), Expect = 2.5e-10
Identity = 42/68 (61.76%), Postives = 54/68 (79.41%), Query Frame = 0
Query: 11 LFLTLVLALTSISTDAARVPTPYWEQMLPKKLPSPSSAPSKGTNTVA-PSSSKPMKVNGN 70
LFLTL+ AL +S +A+R+P WEQMLPKKLPSP+S+PSKGTN+V+ SSSK + V+ N
Sbjct: 10 LFLTLIFALVILS-EASRLPKSSWEQMLPKKLPSPNSSPSKGTNSVSTSSSSKEVNVDKN 69
Query: 71 LPAKDGNV 78
LP+ DG V
Sbjct: 70 LPSSDGKV 76
BLAST of CSPI07G10100 vs. ExPASy TrEMBL
Match:
A0A803PR73 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 73.6 bits (179), Expect = 4.2e-10
Identity = 41/77 (53.25%), Postives = 58/77 (75.32%), Query Frame = 0
Query: 1 MLLSFNFRFILFLTLVLALTSISTDAARVPTPYWEQMLPKKLPSPSSAPSKGTNTVAPSS 60
ML S+ ++ LF L++A +S +A+R+P Y++QM+PKKLPSPSS+PSKGTN+V SS
Sbjct: 37 MLGSWRQKYCLFFILLIAFIDLS-EASRLPKEYFKQMMPKKLPSPSSSPSKGTNSVTTSS 96
Query: 61 SKPMKVNGNLPAKDGNV 78
SK +K + NLP+ DG V
Sbjct: 97 SKAVKADANLPSFDGKV 112
BLAST of CSPI07G10100 vs. ExPASy TrEMBL
Match:
A0A7J6GWN4 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_008835 PE=4 SV=1)
HSP 1 Score: 71.6 bits (174), Expect = 1.6e-09
Identity = 40/75 (53.33%), Postives = 57/75 (76.00%), Query Frame = 0
Query: 1 MLLSFNFRFILFLTLVLALTSISTDAARVPTPYWEQMLPKKLPSPSSAPSKGTNTVAPSS 60
ML S+ ++ LF L++A +S +A+R+P Y++QM+PKKLPSPSS+PSKGTN+V SS
Sbjct: 37 MLGSWRQKYCLFFILLIAFIDLS-EASRLPKEYFKQMMPKKLPSPSSSPSKGTNSVTTSS 96
Query: 61 SKPMKVNGNLPAKDG 76
SK +K + NLP+ DG
Sbjct: 97 SKAVKADANLPSFDG 110
BLAST of CSPI07G10100 vs. NCBI nr
Match:
KAE8646070.1 (hypothetical protein Csa_015561 [Cucumis sativus])
HSP 1 Score: 146.4 bits (368), Expect = 1.1e-31
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0
Query: 1 MLLSFNFRFILFLTLVLALTSISTDAARVPTPYWEQMLPKKLPSPSSAPSKGTNTVAPSS 60
MLLSFNFRFILFLTLVLALTSISTDAARVPTPYWEQMLPKKLPSPSSAPSKGTNTVAPSS
Sbjct: 1 MLLSFNFRFILFLTLVLALTSISTDAARVPTPYWEQMLPKKLPSPSSAPSKGTNTVAPSS 60
Query: 61 SKPMKVNGNLPAKDGNV 78
SKPMKVNGNLPAKDGNV
Sbjct: 61 SKPMKVNGNLPAKDGNV 77
BLAST of CSPI07G10100 vs. NCBI nr
Match:
TYK23265.1 (glutamate-gated kainate-type ion channel receptor subunit GluR5 [Cucumis melo var. makuwa])
HSP 1 Score: 143.3 bits (360), Expect = 9.0e-31
Identity = 74/77 (96.10%), Postives = 77/77 (100.00%), Query Frame = 0
Query: 1 MLLSFNFRFILFLTLVLALTSISTDAARVPTPYWEQMLPKKLPSPSSAPSKGTNTVAPSS 60
MLL+FNFRFILFLTL+LALTSIS+DAARVPTPYWEQMLPKKLPSPSSAPSKGTNTVAPSS
Sbjct: 1 MLLAFNFRFILFLTLILALTSISSDAARVPTPYWEQMLPKKLPSPSSAPSKGTNTVAPSS 60
Query: 61 SKPMKVNGNLPAKDGNV 78
SKPMKVNGNLPAKDGNV
Sbjct: 61 SKPMKVNGNLPAKDGNV 77
BLAST of CSPI07G10100 vs. NCBI nr
Match:
KAG6607702.1 (hypothetical protein SDJN03_01044, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 100.1 bits (248), Expect = 8.7e-18
Identity = 55/73 (75.34%), Postives = 62/73 (84.93%), Query Frame = 0
Query: 1 MLLSFNFRFILFLTLVLALTSISTDAARVPTPYWEQMLPKKLPSPSSAPSKGTNTVAPSS 60
M LSF RFI L LVLAL S+S++AARVPT YWEQMLPKKLP+PSSAPSKGTN+VA SS
Sbjct: 22 MFLSFRPRFIFILLLVLALASMSSEAARVPTKYWEQMLPKKLPTPSSAPSKGTNSVASSS 81
Query: 61 SKPMKVNGNLPAK 74
K +KV+GNLPAK
Sbjct: 82 FKTVKVDGNLPAK 94
BLAST of CSPI07G10100 vs. NCBI nr
Match:
EXC32449.1 (hypothetical protein L484_012616 [Morus notabilis])
HSP 1 Score: 74.3 bits (181), Expect = 5.1e-10
Identity = 42/68 (61.76%), Postives = 54/68 (79.41%), Query Frame = 0
Query: 11 LFLTLVLALTSISTDAARVPTPYWEQMLPKKLPSPSSAPSKGTNTVA-PSSSKPMKVNGN 70
LFLTL+ AL +S +A+R+P WEQMLPKKLPSP+S+PSKGTN+V+ SSSK + V+ N
Sbjct: 10 LFLTLIFALVILS-EASRLPKSSWEQMLPKKLPSPNSSPSKGTNSVSTSSSSKEVNVDKN 69
Query: 71 LPAKDGNV 78
LP+ DG V
Sbjct: 70 LPSSDGKV 76
BLAST of CSPI07G10100 vs. NCBI nr
Match:
KAF9855135.1 (hypothetical protein H0E87_006638 [Populus deltoides])
HSP 1 Score: 73.2 bits (178), Expect = 1.1e-09
Identity = 41/77 (53.25%), Postives = 57/77 (74.03%), Query Frame = 0
Query: 1 MLLSFNFRFILFLTLVLALTSISTDAARVPTPYWEQMLPKKLPSPSSAPSKGTNTVAPSS 60
ML+S+ + +LF +LA +S+DA+R+P YWEQMLPKKLP+PSS+PSKGTN+V+ S
Sbjct: 1 MLVSWRQKCLLF--TLLAFVVLSSDASRLPKAYWEQMLPKKLPAPSSSPSKGTNSVSRSY 60
Query: 61 SKPMKVNGNLPAKDGNV 78
S +K + NL + DG V
Sbjct: 61 STTVKSDSNLSSSDGKV 75
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3DI56 | 4.3e-31 | 96.10 | Glutamate-gated kainate-type ion channel receptor subunit GluR5 OS=Cucumis melo ... | [more] |
A0A7N2MJW9 | 1.5e-10 | 54.55 | Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1 | [more] |
W9S9P5 | 2.5e-10 | 61.76 | Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_012616 PE=4 SV=1 | [more] |
A0A803PR73 | 4.2e-10 | 53.25 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A7J6GWN4 | 1.6e-09 | 53.33 | Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_008835 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
KAE8646070.1 | 1.1e-31 | 100.00 | hypothetical protein Csa_015561 [Cucumis sativus] | [more] |
TYK23265.1 | 9.0e-31 | 96.10 | glutamate-gated kainate-type ion channel receptor subunit GluR5 [Cucumis melo va... | [more] |
KAG6607702.1 | 8.7e-18 | 75.34 | hypothetical protein SDJN03_01044, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
EXC32449.1 | 5.1e-10 | 61.76 | hypothetical protein L484_012616 [Morus notabilis] | [more] |
KAF9855135.1 | 1.1e-09 | 53.25 | hypothetical protein H0E87_006638 [Populus deltoides] | [more] |
Match Name | E-value | Identity | Description | |