CSPI04G19550 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G19550
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Transposon TX1 uncharacterized 149 kDa protein
Location	Chr4: 17322131 .. 17323144 (+)
RNA-Seq Expression	CSPI04G19550
Synteny	CSPI04G19550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTGAAGCCTTTGTAGTTGGAAAAGATAGGGTTCACATTCCTATCCTTCAATTTGCAGATGATGCACTCTTGTTTTGTAAATATGATGAGGAAATGATGGAAAACCTTAAAAAGACATTACTAGTCTTTGAATGGTGTTCAGGTCAAAAGATTAATTGGGAGAAATCAGCTATTTGTGGTTTAAATATTGAGGACAGCGAGGTTATTTCAACAGCAAACATATTAAACTGCAAGGTAGAAAGTCTCCCCTTCATTTATCTCGGTCTTCCTTTGGGAAGTTATCCAAAAAGTGCTCCATTTTGGCAGCCGATTCTTGATAAAATCCATGGAAAGCTAGATAAATGGAGAAGATACAATCTCTCTAGGGGTGGGAGGATTACACTATGAAAATCAGTTTTGTCCAGCCTCCCTACATAGTATATGTCTGTTTTCCTCATGCCAGAATCTGCTCTAAGGAAAGAATCATGAGAAAGTTTTTTTTGAGAAGGAAACAAGGGAGGAAGGCTAAACCACCTAGTAAAATGGGATGTTGTAATTAAATCCTACAGAGATGGAGGACTTAGTTTGGGCAAGTTGAAGCACAAGAATACGGCCCTATTGTCTAAGTGGGGTTAGCGTTTCTCAAAAGAACAAAACTCCCTTTGGTGTCAAGTGATAAGAAGCATCCATGAAAGTAGCACTTTCAACTGGCATTCAAATGGAAAAGAAACCGTGAGTCTAAGAAGCCCTTGGATTAGCATATCAAGGCAATGGCGCAAAATTGATTCTTTGGCTCTTTTCAAATTAGGTGATGGCAGCAGAATATTGTTTTGGAAGCACCCTTGGGTGGACATTATCACCTTGGAGTGCAAATTTCCAAGATTGGGTAGGATCGCACTCAACCCAAATGGGTCTGTTTTAGATCATTGGGACTCGTCAACCAACTCTTGGTCCATCTATTTCAGAAGATTGCTTAATGATGAGGAAATATTAGATTTTCAGGCCTTGTTGAGTCAGATTTCTTCTTCATAA

mRNA sequence

ATGTTTGAAGCCTTTGTAGTTGGAAAAGATAGGGTTCACATTCCTATCCTTCAATTTGCAGATGATGCACTCTTGTTTTGTAAATATGATGAGGAAATGATGGAAAACCTTAAAAAGACATTACTAGTCTTTGAATGGTGTTCAGGTCAAAAGATTAATTGGGAGAAATCAGCTATTTGTGGTTTAAATATTGAGGACAGCGAGGTTATTTCAACAGCAAACATATTAAACTGCAAGGTAGAAAGTCTCCCCTTCATTTATCTCGGTCTTCCTTTGGGAAGTTATCCAAAAAGTGCTCCATTTTGGCAGCCGATTCTTGATAAAATCCATGGAAAGCTAGATAAATGGAGAAGATACAATCTCTCTAGGGTGATAAGAAGCATCCATGAAAGTAGCACTTTCAACTGGCATTCAAATGGAAAAGAAACCGTGAGTCTAAGAAGCCCTTGGATTAGCATATCAAGGCAATGGCGCAAAATTGATTCTTTGGCTCTTTTCAAATTAGGTGATGGCAGCAGAATATTGTTTTGGAAGCACCCTTGGGTGGACATTATCACCTTGGAGTGCAAATTTCCAAGATTGGGTAGGATCGCACTCAACCCAAATGGGTCTGTTTTAGATCATTGGGACTCGTCAACCAACTCTTGGTCCATCTATTTCAGAAGATTGCTTAATGATGAGGAAATATTAGATTTTCAGGCCTTGTTGAGTCAGATTTCTTCTTCATAA

Coding sequence (CDS)

ATGTTTGAAGCCTTTGTAGTTGGAAAAGATAGGGTTCACATTCCTATCCTTCAATTTGCAGATGATGCACTCTTGTTTTGTAAATATGATGAGGAAATGATGGAAAACCTTAAAAAGACATTACTAGTCTTTGAATGGTGTTCAGGTCAAAAGATTAATTGGGAGAAATCAGCTATTTGTGGTTTAAATATTGAGGACAGCGAGGTTATTTCAACAGCAAACATATTAAACTGCAAGGTAGAAAGTCTCCCCTTCATTTATCTCGGTCTTCCTTTGGGAAGTTATCCAAAAAGTGCTCCATTTTGGCAGCCGATTCTTGATAAAATCCATGGAAAGCTAGATAAATGGAGAAGATACAATCTCTCTAGGGTGATAAGAAGCATCCATGAAAGTAGCACTTTCAACTGGCATTCAAATGGAAAAGAAACCGTGAGTCTAAGAAGCCCTTGGATTAGCATATCAAGGCAATGGCGCAAAATTGATTCTTTGGCTCTTTTCAAATTAGGTGATGGCAGCAGAATATTGTTTTGGAAGCACCCTTGGGTGGACATTATCACCTTGGAGTGCAAATTTCCAAGATTGGGTAGGATCGCACTCAACCCAAATGGGTCTGTTTTAGATCATTGGGACTCGTCAACCAACTCTTGGTCCATCTATTTCAGAAGATTGCTTAATGATGAGGAAATATTAGATTTTCAGGCCTTGTTGAGTCAGATTTCTTCTTCATAA

Protein sequence

MFEAFVVGKDRVHIPILQFADDALLFCKYDEEMMENLKKTLLVFEWCSGQKINWEKSAICGLNIEDSEVISTANILNCKVESLPFIYLGLPLGSYPKSAPFWQPILDKIHGKLDKWRRYNLSRVIRSIHESSTFNWHSNGKETVSLRSPWISISRQWRKIDSLALFKLGDGSRILFWKHPWVDIITLECKFPRLGRIALNPNGSVLDHWDSSTNSWSIYFRRLLNDEEILDFQALLSQISSS*

Homology

[Close]

BLAST of CSPI04G19550 vs. ExPASy TrEMBL
Match: A0A5D3BQV1 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G001420 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 1.4e-40
Identity = 74/123 (60.16%), Postives = 96/123 (78.05%), Query Frame = 0


Query: 1   MFEAFVVGKDRVHIPILQFADDALLFCKYDEEMMENLKKTLLVFEWCSGQKINWEKSAIC 60
           ++E FV+GKD++H+PILQF D  LLFC YD  MM+NL++TL  FEWCSGQK+NW+KSA+C
Sbjct: 158 LYEGFVLGKDKIHVPILQFVDYTLLFCNYDSNMMDNLRQTLDFFEWCSGQKVNWDKSALC 217

Query: 61  GLNIEDSEVISTANILNCKVESLPFIYLGLPLGSYPKSAPFWQPILDKIHGKLDKWRRYN 120
           G+N+ +SE++S A  L  KV+ LP IYLGLPLG Y K    WQ + DK+H KLDKW+R+N
Sbjct: 218 GINVAESELLSMATTLKDKVDHLPVIYLGLPLGGYLKQISLWQLVSDKVHAKLDKWKRFN 277

Query: 121 LSR 124
            SR
Sbjct: 278 RSR 280

[Close]

BLAST of CSPI04G19550 vs. ExPASy TrEMBL
Match: A0A438I181 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_280 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 1.8e-38
Identity = 94/260 (36.15%), Postives = 138/260 (53.08%), Query Frame = 0


Query: 1   MFEAFVVGKDRVHIPILQFADDALLFCKYDEEMMENLKKTLLVFEWCSGQKINWEKSAIC 60
           + E F VG++R  +  LQFADD + F    EE +  LK  LLVF   SG K+N +KS I 
Sbjct: 681 VLEGFRVGRNRTRVSHLQFADDTIFFSSTREEDLMTLKSVLLVFGHISGLKVNLDKSNIY 740

Query: 61  GLNIEDSEVISTANILNCKVESLPFIYLGLPLGSYPKSAPFWQPILDKIHGKLDKWRRYN 120
           G+N+E + +   A +L+CK    P +YLGLPLG  PK++ FW P++++I  +LD W++  
Sbjct: 741 GINLEQNHLSRLAVMLDCKASGWPILYLGLPLGGNPKASGFWDPVIERISRRLDGWQKAY 800

Query: 121 LS------------------RVIRSIHESSTFNWHSNGKETVSLRSPWISISRQWRKIDS 180
           LS                  +VI SI+ S +  W  N     S R PW +I+  +++   
Sbjct: 801 LSFGGKWLWRYPREGSALWHQVILSIYGSHSNGWDVNNNVRWSHRCPWKAIALVFQEFSK 860

Query: 181 LALFKLGDGSRILFWKHPWVDIITLECKFPRLGRIALNPN---GSVLDHWDSSTNSWSIY 240
              F +GDG RI FW   W    TL  ++PRL  +  + N    S+L +  S   SW+  
Sbjct: 861 FTRFVVGDGDRIRFWDDLWWGDQTLGTQYPRLLSVVTDKNAPISSILGY--SRPFSWNFN 920

[Close]

BLAST of CSPI04G19550 vs. ExPASy TrEMBL
Match: A0A5A7SP09 (Vacuolar fusion protein MON1 homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold284G00570 PE=3 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 9.7e-37
Identity = 80/134 (59.70%), Postives = 98/134 (73.13%), Query Frame = 0


Query: 113 LDKWRRYNLS-------RVIRSIHESSTFNWHSNGKETVSLRSPWISISRQWRKIDSLAL 172
           L KWR   L        +V+RSIH+S TF WH++GKE+ SLRSPWISISRQ RK++ LA+
Sbjct: 227 LAKWRWRFLDEPSSLWCKVVRSIHDSDTFIWHTSGKESSSLRSPWISISRQQRKVEILAV 286

Query: 173 FKLGDGSRILFWKHPWVDIITLECKFPRLGRIALNPNGSVLDHWDSSTNSWSIYFRRLLN 232
           FK+G G RILFW  PW++ I L  KFPRL RIAL P GSV ++WDSS++SWSI FR LL 
Sbjct: 287 FKVGKGDRILFWLDPWMNSIALWIKFPRLYRIALPPKGSVTNYWDSSSSSWSIIFRCLLK 346

Query: 233 DEEILDFQALLSQI 240
           +EEI DFQ LL  +
Sbjct: 347 EEEISDFQFLLESL 360

[Close]

BLAST of CSPI04G19550 vs. ExPASy TrEMBL
Match: A0A438DVH3 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_414 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 9.7e-37
Identity = 91/260 (35.00%), Postives = 135/260 (51.92%), Query Frame = 0


Query: 1   MFEAFVVGKDRVHIPILQFADDALLFCKYDEEMMENLKKTLLVFEWCSGQKINWEKSAIC 60
           + E F VG+++  +  LQFADD + F    EE M  LK  LLVF    G K+N +KS I 
Sbjct: 409 VLEGFRVGRNKTRVSHLQFADDTIFFSSTREEDMMTLKSVLLVFVHIFGLKVNLDKSNIY 468

Query: 61  GLNIEDSEVISTANILNCKVESLPFIYLGLPLGSYPKSAPFWQPILDKIHGKLDKWRRYN 120
            +N+E + +   A +L+CK    P +YLGLPLG  PK++ FW P++++I  +LD W++  
Sbjct: 469 DINLEQNHLSRLAEMLDCKASGWPILYLGLPLGGNPKASGFWDPVIERISRRLDGWQKAY 528

Query: 121 LS------------------RVIRSIHESSTFNWHSNGKETVSLRSPWISISRQWRKIDS 180
           LS                  +VI SI+ S +  W  N     S R PW +I+  +++   
Sbjct: 529 LSFGGKWLWRYPREGSALWHQVILSIYGSHSNGWDVNNNVRWSHRCPWKAIALVFQEFSK 588

Query: 181 LALFKLGDGSRILFWKHPWVDIITLECKFPRLGRIALNPN---GSVLDHWDSSTNSWSIY 240
              F +GDG RI FW   W     L  ++PRL  +  + N    S+L +  S   SW+  
Sbjct: 589 FTRFVVGDGDRIRFWDDLWWGDQPLGTQYPRLLSVVTDKNAPISSILGY--SRPFSWNFN 648

[Close]

BLAST of CSPI04G19550 vs. ExPASy TrEMBL
Match: A0A5D3BF26 (Putative LRR receptor-like serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00080 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 8.2e-36
Identity = 95/298 (31.88%), Postives = 131/298 (43.96%), Query Frame = 0


Query: 33  MMENLKKTLLVFEWCSGQKINWEKSAICGLNIEDSEVISTANILNCKVESLPFIYLGLPL 92
           M+  LK+ + +FE CS QK+NWEKSA+ G++I +  ++ TA+ ++CK E+LP +YL LPL
Sbjct: 1   MLLKLKEAIRLFELCSRQKVNWEKSALSGVSIPEDILLQTADRMSCKAENLPIVYLSLPL 60

Query: 93  GSYPKSAPFWQPILDKIHGKLDKWRRYNLSR----------------------------- 152
           G YP+   FWQP++D+IH KLD+W+ +N+ R                             
Sbjct: 61  GGYPQHQDFWQPVIDRIHKKLDRWKHFNIPRGGRQILCNAVLTSLQTYYLSHKMWQSPLE 120

Query: 153 ------------------------------------------------------------ 212
                                                                       
Sbjct: 121 KITRNFFWEGSSGSKLNHLVKWNLVSLSLKGVGLGLGALKTHNSALLAKWGWRFAMEDFS 180

Query: 213 ----VIRSIHESSTFNWHSNGKETVSLRSPWISISRQWRKIDSLALFKLGDGSRILFWKH 238
               +I SIH    F+W +  K   SLRSPW SIS+ WR ++SLAL K            
Sbjct: 181 FGRKIICSIHGKEPFDWFTLEKFGNSLRSPWFSISKVWRSVESLALTK------------ 240

[Close]

BLAST of CSPI04G19550 vs. NCBI nr
Match: XP_038880332.1 (uncharacterized protein LOC120071973 [Benincasa hispida])

HSP 1 Score: 226.5 bits (576), Expect = 2.5e-55
Identity = 114/279 (40.86%), Postives = 151/279 (54.12%), Query Frame = 0


Query: 2   FEAFVVGKDRVHIPILQFADDALLFCKYDEEMMENLKKTLLVFEWCSGQKINWEKSAICG 61
           +E F+VGKD+VHI I+QF  D LLFCKY +EM+ENL +T+ +FEWCS QK+NWEKSAICG
Sbjct: 79  YEGFLVGKDKVHISIIQFVGDTLLFCKYGDEMIENL-RTIEIFEWCSSQKVNWEKSAICG 138

Query: 62  LNIEDSEVISTANILNCKVESLPFIYLGLPLGSYPKSAPFWQPILDKIHGKLDKWRRYNL 121
           +NIE+++++S A  LNCKV+ LP +YLGLPLG YPK+  FWQP++DK+ GKLDKWRR+NL
Sbjct: 139 INIEENKMLSVAAQLNCKVKHLPLMYLGLPLGGYPKNVSFWQPVIDKLQGKLDKWRRFNL 198

Query: 122 SR---------------------------------------------------------- 181
           SR                                                          
Sbjct: 199 SRGGKATLCKSVHSNLPTYYLSLFLLPEKVLGIMERTMKNFFWEGHKGGKINHLVKWELV 258

Query: 182 ---------------------------------------VIRSIHESSTFNWHSNGKETV 184
                                                  V++SIH    F+WH++GK ++
Sbjct: 259 TKAQEDGGLGLGGLRARNLAFLAKWGWRLLHNENTLWSKVVKSIHRRDMFDWHTSGKVSL 318

[Close]

BLAST of CSPI04G19550 vs. NCBI nr
Match: TYK01565.1 (hypothetical protein E5676_scaffold451G001420 [Cucumis melo var. makuwa])

HSP 1 Score: 176.4 bits (446), Expect = 3.0e-40
Identity = 74/123 (60.16%), Postives = 96/123 (78.05%), Query Frame = 0


Query: 1   MFEAFVVGKDRVHIPILQFADDALLFCKYDEEMMENLKKTLLVFEWCSGQKINWEKSAIC 60
           ++E FV+GKD++H+PILQF D  LLFC YD  MM+NL++TL  FEWCSGQK+NW+KSA+C
Sbjct: 158 LYEGFVLGKDKIHVPILQFVDYTLLFCNYDSNMMDNLRQTLDFFEWCSGQKVNWDKSALC 217

Query: 61  GLNIEDSEVISTANILNCKVESLPFIYLGLPLGSYPKSAPFWQPILDKIHGKLDKWRRYN 120
           G+N+ +SE++S A  L  KV+ LP IYLGLPLG Y K    WQ + DK+H KLDKW+R+N
Sbjct: 218 GINVAESELLSMATTLKDKVDHLPVIYLGLPLGGYLKQISLWQLVSDKVHAKLDKWKRFN 277

Query: 121 LSR 124
            SR
Sbjct: 278 RSR 280

[Close]

BLAST of CSPI04G19550 vs. NCBI nr
Match: XP_038889274.1 (uncharacterized protein LOC120079176 [Benincasa hispida])

HSP 1 Score: 175.6 bits (444), Expect = 5.1e-40
Identity = 76/126 (60.32%), Postives = 97/126 (76.98%), Query Frame = 0


Query: 1   MFEAFVVGKDRVHIPILQFADDALLFCKYDEEMMENLKKTLLVFEWCSGQKINWEKSAIC 60
           + E FVVGKD++ I ILQFAD  LLFCKYD  M+  LK+T+  F+WCSGQK+NWEKSA+ 
Sbjct: 392 LIEGFVVGKDKIQISILQFADSTLLFCKYDSIMLAKLKQTVEFFKWCSGQKVNWEKSALY 451

Query: 61  GLNIEDSEVISTANILNCKVESLPFIYLGLPLGSYPKSAPFWQPILDKIHGKLDKWRRYN 120
           G+N++++E+ISTA  LNCK + LPF YLGLPLG Y K   FWQP+L+    KLDKW+ +N
Sbjct: 452 GINVDENELISTAASLNCKADHLPFSYLGLPLGGYLKKLSFWQPVLNNFQAKLDKWKHFN 511

Query: 121 LSRVIR 127
           LSR +R
Sbjct: 512 LSRGVR 517

[Close]

BLAST of CSPI04G19550 vs. NCBI nr
Match: RVW90400.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera])

HSP 1 Score: 169.5 bits (428), Expect = 3.6e-38
Identity = 94/260 (36.15%), Postives = 138/260 (53.08%), Query Frame = 0


Query: 1   MFEAFVVGKDRVHIPILQFADDALLFCKYDEEMMENLKKTLLVFEWCSGQKINWEKSAIC 60
           + E F VG++R  +  LQFADD + F    EE +  LK  LLVF   SG K+N +KS I 
Sbjct: 681 VLEGFRVGRNRTRVSHLQFADDTIFFSSTREEDLMTLKSVLLVFGHISGLKVNLDKSNIY 740

Query: 61  GLNIEDSEVISTANILNCKVESLPFIYLGLPLGSYPKSAPFWQPILDKIHGKLDKWRRYN 120
           G+N+E + +   A +L+CK    P +YLGLPLG  PK++ FW P++++I  +LD W++  
Sbjct: 741 GINLEQNHLSRLAVMLDCKASGWPILYLGLPLGGNPKASGFWDPVIERISRRLDGWQKAY 800

Query: 121 LS------------------RVIRSIHESSTFNWHSNGKETVSLRSPWISISRQWRKIDS 180
           LS                  +VI SI+ S +  W  N     S R PW +I+  +++   
Sbjct: 801 LSFGGKWLWRYPREGSALWHQVILSIYGSHSNGWDVNNNVRWSHRCPWKAIALVFQEFSK 860

Query: 181 LALFKLGDGSRILFWKHPWVDIITLECKFPRLGRIALNPN---GSVLDHWDSSTNSWSIY 240
              F +GDG RI FW   W    TL  ++PRL  +  + N    S+L +  S   SW+  
Sbjct: 861 FTRFVVGDGDRIRFWDDLWWGDQTLGTQYPRLLSVVTDKNAPISSILGY--SRPFSWNFN 920

[Close]

BLAST of CSPI04G19550 vs. NCBI nr
Match: KAA0032570.1 (protein SAND [Cucumis melo var. makuwa] >TYK20915.1 protein SAND [Cucumis melo var. makuwa])

HSP 1 Score: 163.7 bits (413), Expect = 2.0e-36
Identity = 80/134 (59.70%), Postives = 98/134 (73.13%), Query Frame = 0


Query: 113 LDKWRRYNLS-------RVIRSIHESSTFNWHSNGKETVSLRSPWISISRQWRKIDSLAL 172
           L KWR   L        +V+RSIH+S TF WH++GKE+ SLRSPWISISRQ RK++ LA+
Sbjct: 227 LAKWRWRFLDEPSSLWCKVVRSIHDSDTFIWHTSGKESSSLRSPWISISRQQRKVEILAV 286

Query: 173 FKLGDGSRILFWKHPWVDIITLECKFPRLGRIALNPNGSVLDHWDSSTNSWSIYFRRLLN 232
           FK+G G RILFW  PW++ I L  KFPRL RIAL P GSV ++WDSS++SWSI FR LL 
Sbjct: 287 FKVGKGDRILFWLDPWMNSIALWIKFPRLYRIALPPKGSVTNYWDSSSSSWSIIFRCLLK 346

Query: 233 DEEILDFQALLSQI 240
           +EEI DFQ LL  +
Sbjct: 347 EEEISDFQFLLESL 360

The following BLAST results are available for this feature:

BLAST of CSPI04G19550 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI04G19550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BQV1	1.4e-40	60.16	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A438I181	1.8e-38	36.15	Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX...	[more]
A0A5A7SP09	9.7e-37	59.70	Vacuolar fusion protein MON1 homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A438DVH3	9.7e-37	35.00	Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX...	[more]
A0A5D3BF26	8.2e-36	31.88	Putative LRR receptor-like serine/threonine-protein kinase OS=Cucumis melo var. ...	[more]

BLAST of CSPI04G19550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880332.1	2.5e-55	40.86	uncharacterized protein LOC120071973 [Benincasa hispida]	[more]
TYK01565.1	3.0e-40	60.16	hypothetical protein E5676_scaffold451G001420 [Cucumis melo var. makuwa]	[more]
XP_038889274.1	5.1e-40	60.32	uncharacterized protein LOC120079176 [Benincasa hispida]	[more]
RVW90400.1	3.6e-38	36.15	Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]	[more]
KAA0032570.1	2.0e-36	59.70	protein SAND [Cucumis melo var. makuwa] >TYK20915.1 protein SAND [Cucumis melo v...	[more]

BLAST of CSPI04G19550 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33116	REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED	coord: 17..125
None	No IPR available	PANTHER	PTHR33116:SF47	REVERSE TRANSCRIPTASE DOMAIN, ZINC FINGER, CCHC-TYPE-RELATED	coord: 17..125
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 1..92 score: 8.855118

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G19550.1	CSPI04G19550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044237	cellular metabolic process
biological_process	GO:0006810	transport
molecular_function	GO:0003824	catalytic activity