CSPI04G19550.1 (mRNA) Cucumber (PI 183967) v1

Overview


Name	CSPI04G19550.1
Type	mRNA
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Transposon TX1 uncharacterized 149 kDa protein
Location	Chr4: 17322131 .. 17323144 (+)
Sequence length	729
RNA-Seq Expression	CSPI04G19550.1
Synteny	CSPI04G19550.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTGAAGCCTTTGTAGTTGGAAAAGATAGGGTTCACATTCCTATCCTTCAATTTGCAGATGATGCACTCTTGTTTTGTAAATATGATGAGGAAATGATGGAAAACCTTAAAAAGACATTACTAGTCTTTGAATGGTGTTCAGGTCAAAAGATTAATTGGGAGAAATCAGCTATTTGTGGTTTAAATATTGAGGACAGCGAGGTTATTTCAACAGCAAACATATTAAACTGCAAGGTAGAAAGTCTCCCCTTCATTTATCTCGGTCTTCCTTTGGGAAGTTATCCAAAAAGTGCTCCATTTTGGCAGCCGATTCTTGATAAAATCCATGGAAAGCTAGATAAATGGAGAAGATACAATCTCTCTAGGGGTGGGAGGATTACACTATGAAAATCAGTTTTGTCCAGCCTCCCTACATAGTATATGTCTGTTTTCCTCATGCCAGAATCTGCTCTAAGGAAAGAATCATGAGAAAGTTTTTTTTGAGAAGGAAACAAGGGAGGAAGGCTAAACCACCTAGTAAAATGGGATGTTGTAATTAAATCCTACAGAGATGGAGGACTTAGTTTGGGCAAGTTGAAGCACAAGAATACGGCCCTATTGTCTAAGTGGGGTTAGCGTTTCTCAAAAGAACAAAACTCCCTTTGGTGTCAAGTGATAAGAAGCATCCATGAAAGTAGCACTTTCAACTGGCATTCAAATGGAAAAGAAACCGTGAGTCTAAGAAGCCCTTGGATTAGCATATCAAGGCAATGGCGCAAAATTGATTCTTTGGCTCTTTTCAAATTAGGTGATGGCAGCAGAATATTGTTTTGGAAGCACCCTTGGGTGGACATTATCACCTTGGAGTGCAAATTTCCAAGATTGGGTAGGATCGCACTCAACCCAAATGGGTCTGTTTTAGATCATTGGGACTCGTCAACCAACTCTTGGTCCATCTATTTCAGAAGATTGCTTAATGATGAGGAAATATTAGATTTTCAGGCCTTGTTGAGTCAGATTTCTTCTTCATAA

mRNA sequence

ATGTTTGAAGCCTTTGTAGTTGGAAAAGATAGGGTTCACATTCCTATCCTTCAATTTGCAGATGATGCACTCTTGTTTTGTAAATATGATGAGGAAATGATGGAAAACCTTAAAAAGACATTACTAGTCTTTGAATGGTGTTCAGGTCAAAAGATTAATTGGGAGAAATCAGCTATTTGTGGTTTAAATATTGAGGACAGCGAGGTTATTTCAACAGCAAACATATTAAACTGCAAGGTAGAAAGTCTCCCCTTCATTTATCTCGGTCTTCCTTTGGGAAGTTATCCAAAAAGTGCTCCATTTTGGCAGCCGATTCTTGATAAAATCCATGGAAAGCTAGATAAATGGAGAAGATACAATCTCTCTAGGGTGATAAGAAGCATCCATGAAAGTAGCACTTTCAACTGGCATTCAAATGGAAAAGAAACCGTGAGTCTAAGAAGCCCTTGGATTAGCATATCAAGGCAATGGCGCAAAATTGATTCTTTGGCTCTTTTCAAATTAGGTGATGGCAGCAGAATATTGTTTTGGAAGCACCCTTGGGTGGACATTATCACCTTGGAGTGCAAATTTCCAAGATTGGGTAGGATCGCACTCAACCCAAATGGGTCTGTTTTAGATCATTGGGACTCGTCAACCAACTCTTGGTCCATCTATTTCAGAAGATTGCTTAATGATGAGGAAATATTAGATTTTCAGGCCTTGTTGAGTCAGATTTCTTCTTCATAA

Coding sequence (CDS)

ATGTTTGAAGCCTTTGTAGTTGGAAAAGATAGGGTTCACATTCCTATCCTTCAATTTGCAGATGATGCACTCTTGTTTTGTAAATATGATGAGGAAATGATGGAAAACCTTAAAAAGACATTACTAGTCTTTGAATGGTGTTCAGGTCAAAAGATTAATTGGGAGAAATCAGCTATTTGTGGTTTAAATATTGAGGACAGCGAGGTTATTTCAACAGCAAACATATTAAACTGCAAGGTAGAAAGTCTCCCCTTCATTTATCTCGGTCTTCCTTTGGGAAGTTATCCAAAAAGTGCTCCATTTTGGCAGCCGATTCTTGATAAAATCCATGGAAAGCTAGATAAATGGAGAAGATACAATCTCTCTAGGGTGATAAGAAGCATCCATGAAAGTAGCACTTTCAACTGGCATTCAAATGGAAAAGAAACCGTGAGTCTAAGAAGCCCTTGGATTAGCATATCAAGGCAATGGCGCAAAATTGATTCTTTGGCTCTTTTCAAATTAGGTGATGGCAGCAGAATATTGTTTTGGAAGCACCCTTGGGTGGACATTATCACCTTGGAGTGCAAATTTCCAAGATTGGGTAGGATCGCACTCAACCCAAATGGGTCTGTTTTAGATCATTGGGACTCGTCAACCAACTCTTGGTCCATCTATTTCAGAAGATTGCTTAATGATGAGGAAATATTAGATTTTCAGGCCTTGTTGAGTCAGATTTCTTCTTCATAA

Protein sequence

MFEAFVVGKDRVHIPILQFADDALLFCKYDEEMMENLKKTLLVFEWCSGQKINWEKSAICGLNIEDSEVISTANILNCKVESLPFIYLGLPLGSYPKSAPFWQPILDKIHGKLDKWRRYNLSRVIRSIHESSTFNWHSNGKETVSLRSPWISISRQWRKIDSLALFKLGDGSRILFWKHPWVDIITLECKFPRLGRIALNPNGSVLDHWDSSTNSWSIYFRRLLNDEEILDFQALLSQISSS*

Homology

[Close]

BLAST of CSPI04G19550.1 vs. ExPASy TrEMBL
Match: A0A5D3BQV1 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G001420 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 1.4e-40
Identity = 74/123 (60.16%), Postives = 96/123 (78.05%), Query Frame = 0


Query: 1   MFEAFVVGKDRVHIPILQFADDALLFCKYDEEMMENLKKTLLVFEWCSGQKINWEKSAIC 60
           ++E FV+GKD++H+PILQF D  LLFC YD  MM+NL++TL  FEWCSGQK+NW+KSA+C
Sbjct: 158 LYEGFVLGKDKIHVPILQFVDYTLLFCNYDSNMMDNLRQTLDFFEWCSGQKVNWDKSALC 217

Query: 61  GLNIEDSEVISTANILNCKVESLPFIYLGLPLGSYPKSAPFWQPILDKIHGKLDKWRRYN 120
           G+N+ +SE++S A  L  KV+ LP IYLGLPLG Y K    WQ + DK+H KLDKW+R+N
Sbjct: 218 GINVAESELLSMATTLKDKVDHLPVIYLGLPLGGYLKQISLWQLVSDKVHAKLDKWKRFN 277

Query: 121 LSR 124
            SR
Sbjct: 278 RSR 280

[Close]

BLAST of CSPI04G19550.1 vs. ExPASy TrEMBL
Match: A0A438I181 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_280 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 1.8e-38
Identity = 94/260 (36.15%), Postives = 138/260 (53.08%), Query Frame = 0


Query: 1   MFEAFVVGKDRVHIPILQFADDALLFCKYDEEMMENLKKTLLVFEWCSGQKINWEKSAIC 60
           + E F VG++R  +  LQFADD + F    EE +  LK  LLVF   SG K+N +KS I 
Sbjct: 681 VLEGFRVGRNRTRVSHLQFADDTIFFSSTREEDLMTLKSVLLVFGHISGLKVNLDKSNIY 740

Query: 61  GLNIEDSEVISTANILNCKVESLPFIYLGLPLGSYPKSAPFWQPILDKIHGKLDKWRRYN 120
           G+N+E + +   A +L+CK    P +YLGLPLG  PK++ FW P++++I  +LD W++  
Sbjct: 741 GINLEQNHLSRLAVMLDCKASGWPILYLGLPLGGNPKASGFWDPVIERISRRLDGWQKAY 800

Query: 121 LS------------------RVIRSIHESSTFNWHSNGKETVSLRSPWISISRQWRKIDS 180
           LS                  +VI SI+ S +  W  N     S R PW +I+  +++   
Sbjct: 801 LSFGGKWLWRYPREGSALWHQVILSIYGSHSNGWDVNNNVRWSHRCPWKAIALVFQEFSK 860

Query: 181 LALFKLGDGSRILFWKHPWVDIITLECKFPRLGRIALNPN---GSVLDHWDSSTNSWSIY 240
              F +GDG RI FW   W    TL  ++PRL  +  + N    S+L +  S   SW+  
Sbjct: 861 FTRFVVGDGDRIRFWDDLWWGDQTLGTQYPRLLSVVTDKNAPISSILGY--SRPFSWNFN 920

[Close]

BLAST of CSPI04G19550.1 vs. ExPASy TrEMBL
Match: A0A5A7SP09 (Vacuolar fusion protein MON1 homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold284G00570 PE=3 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 9.7e-37
Identity = 80/134 (59.70%), Postives = 98/134 (73.13%), Query Frame = 0


Query: 113 LDKWRRYNLS-------RVIRSIHESSTFNWHSNGKETVSLRSPWISISRQWRKIDSLAL 172
           L KWR   L        +V+RSIH+S TF WH++GKE+ SLRSPWISISRQ RK++ LA+
Sbjct: 227 LAKWRWRFLDEPSSLWCKVVRSIHDSDTFIWHTSGKESSSLRSPWISISRQQRKVEILAV 286

Query: 173 FKLGDGSRILFWKHPWVDIITLECKFPRLGRIALNPNGSVLDHWDSSTNSWSIYFRRLLN 232
           FK+G G RILFW  PW++ I L  KFPRL RIAL P GSV ++WDSS++SWSI FR LL 
Sbjct: 287 FKVGKGDRILFWLDPWMNSIALWIKFPRLYRIALPPKGSVTNYWDSSSSSWSIIFRCLLK 346

Query: 233 DEEILDFQALLSQI 240
           +EEI DFQ LL  +
Sbjct: 347 EEEISDFQFLLESL 360

[Close]

BLAST of CSPI04G19550.1 vs. ExPASy TrEMBL
Match: A0A438DVH3 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_414 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 9.7e-37
Identity = 91/260 (35.00%), Postives = 135/260 (51.92%), Query Frame = 0


Query: 1   MFEAFVVGKDRVHIPILQFADDALLFCKYDEEMMENLKKTLLVFEWCSGQKINWEKSAIC 60
           + E F VG+++  +  LQFADD + F    EE M  LK  LLVF    G K+N +KS I 
Sbjct: 409 VLEGFRVGRNKTRVSHLQFADDTIFFSSTREEDMMTLKSVLLVFVHIFGLKVNLDKSNIY 468

Query: 61  GLNIEDSEVISTANILNCKVESLPFIYLGLPLGSYPKSAPFWQPILDKIHGKLDKWRRYN 120
            +N+E + +   A +L+CK    P +YLGLPLG  PK++ FW P++++I  +LD W++  
Sbjct: 469 DINLEQNHLSRLAEMLDCKASGWPILYLGLPLGGNPKASGFWDPVIERISRRLDGWQKAY 528

Query: 121 LS------------------RVIRSIHESSTFNWHSNGKETVSLRSPWISISRQWRKIDS 180
           LS                  +VI SI+ S +  W  N     S R PW +I+  +++   
Sbjct: 529 LSFGGKWLWRYPREGSALWHQVILSIYGSHSNGWDVNNNVRWSHRCPWKAIALVFQEFSK 588

Query: 181 LALFKLGDGSRILFWKHPWVDIITLECKFPRLGRIALNPN---GSVLDHWDSSTNSWSIY 240
              F +GDG RI FW   W     L  ++PRL  +  + N    S+L +  S   SW+  
Sbjct: 589 FTRFVVGDGDRIRFWDDLWWGDQPLGTQYPRLLSVVTDKNAPISSILGY--SRPFSWNFN 648

[Close]

BLAST of CSPI04G19550.1 vs. ExPASy TrEMBL
Match: A0A5D3BF26 (Putative LRR receptor-like serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00080 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 8.2e-36
Identity = 95/298 (31.88%), Postives = 131/298 (43.96%), Query Frame = 0


Query: 33  MMENLKKTLLVFEWCSGQKINWEKSAICGLNIEDSEVISTANILNCKVESLPFIYLGLPL 92
           M+  LK+ + +FE CS QK+NWEKSA+ G++I +  ++ TA+ ++CK E+LP +YL LPL
Sbjct: 1   MLLKLKEAIRLFELCSRQKVNWEKSALSGVSIPEDILLQTADRMSCKAENLPIVYLSLPL 60

Query: 93  GSYPKSAPFWQPILDKIHGKLDKWRRYNLSR----------------------------- 152
           G YP+   FWQP++D+IH KLD+W+ +N+ R                             
Sbjct: 61  GGYPQHQDFWQPVIDRIHKKLDRWKHFNIPRGGRQILCNAVLTSLQTYYLSHKMWQSPLE 120

Query: 153 ------------------------------------------------------------ 212
                                                                       
Sbjct: 121 KITRNFFWEGSSGSKLNHLVKWNLVSLSLKGVGLGLGALKTHNSALLAKWGWRFAMEDFS 180

Query: 213 ----VIRSIHESSTFNWHSNGKETVSLRSPWISISRQWRKIDSLALFKLGDGSRILFWKH 238
               +I SIH    F+W +  K   SLRSPW SIS+ WR ++SLAL K            
Sbjct: 181 FGRKIICSIHGKEPFDWFTLEKFGNSLRSPWFSISKVWRSVESLALTK------------ 240

[Close]

BLAST of CSPI04G19550.1 vs. NCBI nr
Match: XP_038880332.1 (uncharacterized protein LOC120071973 [Benincasa hispida])

HSP 1 Score: 226.5 bits (576), Expect = 2.5e-55
Identity = 114/279 (40.86%), Postives = 151/279 (54.12%), Query Frame = 0


Query: 2   FEAFVVGKDRVHIPILQFADDALLFCKYDEEMMENLKKTLLVFEWCSGQKINWEKSAICG 61
           +E F+VGKD+VHI I+QF  D LLFCKY +EM+ENL +T+ +FEWCS QK+NWEKSAICG
Sbjct: 79  YEGFLVGKDKVHISIIQFVGDTLLFCKYGDEMIENL-RTIEIFEWCSSQKVNWEKSAICG 138

Query: 62  LNIEDSEVISTANILNCKVESLPFIYLGLPLGSYPKSAPFWQPILDKIHGKLDKWRRYNL 121
           +NIE+++++S A  LNCKV+ LP +YLGLPLG YPK+  FWQP++DK+ GKLDKWRR+NL
Sbjct: 139 INIEENKMLSVAAQLNCKVKHLPLMYLGLPLGGYPKNVSFWQPVIDKLQGKLDKWRRFNL 198

Query: 122 SR---------------------------------------------------------- 181
           SR                                                          
Sbjct: 199 SRGGKATLCKSVHSNLPTYYLSLFLLPEKVLGIMERTMKNFFWEGHKGGKINHLVKWELV 258

Query: 182 ---------------------------------------VIRSIHESSTFNWHSNGKETV 184
                                                  V++SIH    F+WH++GK ++
Sbjct: 259 TKAQEDGGLGLGGLRARNLAFLAKWGWRLLHNENTLWSKVVKSIHRRDMFDWHTSGKVSL 318

[Close]

BLAST of CSPI04G19550.1 vs. NCBI nr
Match: TYK01565.1 (hypothetical protein E5676_scaffold451G001420 [Cucumis melo var. makuwa])

HSP 1 Score: 176.4 bits (446), Expect = 3.0e-40
Identity = 74/123 (60.16%), Postives = 96/123 (78.05%), Query Frame = 0


Query: 1   MFEAFVVGKDRVHIPILQFADDALLFCKYDEEMMENLKKTLLVFEWCSGQKINWEKSAIC 60
           ++E FV+GKD++H+PILQF D  LLFC YD  MM+NL++TL  FEWCSGQK+NW+KSA+C
Sbjct: 158 LYEGFVLGKDKIHVPILQFVDYTLLFCNYDSNMMDNLRQTLDFFEWCSGQKVNWDKSALC 217

Query: 61  GLNIEDSEVISTANILNCKVESLPFIYLGLPLGSYPKSAPFWQPILDKIHGKLDKWRRYN 120
           G+N+ +SE++S A  L  KV+ LP IYLGLPLG Y K    WQ + DK+H KLDKW+R+N
Sbjct: 218 GINVAESELLSMATTLKDKVDHLPVIYLGLPLGGYLKQISLWQLVSDKVHAKLDKWKRFN 277

Query: 121 LSR 124
            SR
Sbjct: 278 RSR 280

[Close]

BLAST of CSPI04G19550.1 vs. NCBI nr
Match: XP_038889274.1 (uncharacterized protein LOC120079176 [Benincasa hispida])

HSP 1 Score: 175.6 bits (444), Expect = 5.1e-40
Identity = 76/126 (60.32%), Postives = 97/126 (76.98%), Query Frame = 0


Query: 1   MFEAFVVGKDRVHIPILQFADDALLFCKYDEEMMENLKKTLLVFEWCSGQKINWEKSAIC 60
           + E FVVGKD++ I ILQFAD  LLFCKYD  M+  LK+T+  F+WCSGQK+NWEKSA+ 
Sbjct: 392 LIEGFVVGKDKIQISILQFADSTLLFCKYDSIMLAKLKQTVEFFKWCSGQKVNWEKSALY 451

Query: 61  GLNIEDSEVISTANILNCKVESLPFIYLGLPLGSYPKSAPFWQPILDKIHGKLDKWRRYN 120
           G+N++++E+ISTA  LNCK + LPF YLGLPLG Y K   FWQP+L+    KLDKW+ +N
Sbjct: 452 GINVDENELISTAASLNCKADHLPFSYLGLPLGGYLKKLSFWQPVLNNFQAKLDKWKHFN 511

Query: 121 LSRVIR 127
           LSR +R
Sbjct: 512 LSRGVR 517

[Close]

BLAST of CSPI04G19550.1 vs. NCBI nr
Match: RVW90400.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera])

HSP 1 Score: 169.5 bits (428), Expect = 3.6e-38
Identity = 94/260 (36.15%), Postives = 138/260 (53.08%), Query Frame = 0


Query: 1   MFEAFVVGKDRVHIPILQFADDALLFCKYDEEMMENLKKTLLVFEWCSGQKINWEKSAIC 60
           + E F VG++R  +  LQFADD + F    EE +  LK  LLVF   SG K+N +KS I 
Sbjct: 681 VLEGFRVGRNRTRVSHLQFADDTIFFSSTREEDLMTLKSVLLVFGHISGLKVNLDKSNIY 740

Query: 61  GLNIEDSEVISTANILNCKVESLPFIYLGLPLGSYPKSAPFWQPILDKIHGKLDKWRRYN 120
           G+N+E + +   A +L+CK    P +YLGLPLG  PK++ FW P++++I  +LD W++  
Sbjct: 741 GINLEQNHLSRLAVMLDCKASGWPILYLGLPLGGNPKASGFWDPVIERISRRLDGWQKAY 800

Query: 121 LS------------------RVIRSIHESSTFNWHSNGKETVSLRSPWISISRQWRKIDS 180
           LS                  +VI SI+ S +  W  N     S R PW +I+  +++   
Sbjct: 801 LSFGGKWLWRYPREGSALWHQVILSIYGSHSNGWDVNNNVRWSHRCPWKAIALVFQEFSK 860

Query: 181 LALFKLGDGSRILFWKHPWVDIITLECKFPRLGRIALNPN---GSVLDHWDSSTNSWSIY 240
              F +GDG RI FW   W    TL  ++PRL  +  + N    S+L +  S   SW+  
Sbjct: 861 FTRFVVGDGDRIRFWDDLWWGDQTLGTQYPRLLSVVTDKNAPISSILGY--SRPFSWNFN 920

[Close]

BLAST of CSPI04G19550.1 vs. NCBI nr
Match: KAA0032570.1 (protein SAND [Cucumis melo var. makuwa] >TYK20915.1 protein SAND [Cucumis melo var. makuwa])

HSP 1 Score: 163.7 bits (413), Expect = 2.0e-36
Identity = 80/134 (59.70%), Postives = 98/134 (73.13%), Query Frame = 0


Query: 113 LDKWRRYNLS-------RVIRSIHESSTFNWHSNGKETVSLRSPWISISRQWRKIDSLAL 172
           L KWR   L        +V+RSIH+S TF WH++GKE+ SLRSPWISISRQ RK++ LA+
Sbjct: 227 LAKWRWRFLDEPSSLWCKVVRSIHDSDTFIWHTSGKESSSLRSPWISISRQQRKVEILAV 286

Query: 173 FKLGDGSRILFWKHPWVDIITLECKFPRLGRIALNPNGSVLDHWDSSTNSWSIYFRRLLN 232
           FK+G G RILFW  PW++ I L  KFPRL RIAL P GSV ++WDSS++SWSI FR LL 
Sbjct: 287 FKVGKGDRILFWLDPWMNSIALWIKFPRLYRIALPPKGSVTNYWDSSSSSWSIIFRCLLK 346

Query: 233 DEEILDFQALLSQI 240
           +EEI DFQ LL  +
Sbjct: 347 EEEISDFQFLLESL 360

The following BLAST results are available for this feature:

BLAST of CSPI04G19550.1 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI04G19550.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BQV1	1.4e-40	60.16	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A438I181	1.8e-38	36.15	Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX...	[more]
A0A5A7SP09	9.7e-37	59.70	Vacuolar fusion protein MON1 homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A438DVH3	9.7e-37	35.00	Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX...	[more]
A0A5D3BF26	8.2e-36	31.88	Putative LRR receptor-like serine/threonine-protein kinase OS=Cucumis melo var. ...	[more]

BLAST of CSPI04G19550.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880332.1	2.5e-55	40.86	uncharacterized protein LOC120071973 [Benincasa hispida]	[more]
TYK01565.1	3.0e-40	60.16	hypothetical protein E5676_scaffold451G001420 [Cucumis melo var. makuwa]	[more]
XP_038889274.1	5.1e-40	60.32	uncharacterized protein LOC120079176 [Benincasa hispida]	[more]
RVW90400.1	3.6e-38	36.15	Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]	[more]
KAA0032570.1	2.0e-36	59.70	protein SAND [Cucumis melo var. makuwa] >TYK20915.1 protein SAND [Cucumis melo v...	[more]

BLAST of CSPI04G19550.1 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33116	REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED	coord: 17..125
None	No IPR available	PANTHER	PTHR33116:SF47	REVERSE TRANSCRIPTASE DOMAIN, ZINC FINGER, CCHC-TYPE-RELATED	coord: 17..125
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 1..92 score: 8.855118

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI04G19550	CSPI04G19550	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI04G19550.1.cds1	CSPI04G19550.1.cds1	CDS
CSPI04G19550.1.cds2	CSPI04G19550.1.cds2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI04G19550.1	CSPI04G19550.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044237	cellular metabolic process
biological_process	GO:0006810	transport
molecular_function	GO:0003824	catalytic activity