Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTTTTTGATTCATAGGATGGCCACGCTACTTCTCTGTATTTGGTTTTTGGCTCTTCAACCAGAAGGAAGCAACGGGCTGAGAAACATTGATCTAGCACTCAGATGGGATAAAGCACACATTCCCGTATTCAATAGCTTCAAGTTTGTGAAGGATGTATCTGTTGAGGATGACTGGGGAAGAGCATTGGCTTTTGCACCAGCACCTTTAACAGGTTTCGATCCAACCCAATTGAATAAAAGAAGGATACGAAGAGGATCTGACCCCATTCACAACAAATGTTGA
mRNA sequence
ATGGGGTTTTTGATTCATAGGATGGCCACGCTACTTCTCTGTATTTGGTTTTTGGCTCTTCAACCAGAAGGAAGCAACGGGCTGAGAAACATTGATCTAGCACTCAGATGGGATAAAGCACACATTCCCGTATTCAATAGCTTCAAGTTTGTGAAGGATGTATCTGTTGAGGATGACTGGGGAAGAGCATTGGCTTTTGCACCAGCACCTTTAACAGGTTTCGATCCAACCCAATTGAATAAAAGAAGGATACGAAGAGGATCTGACCCCATTCACAACAAATGTTGA
Coding sequence (CDS)
ATGGGGTTTTTGATTCATAGGATGGCCACGCTACTTCTCTGTATTTGGTTTTTGGCTCTTCAACCAGAAGGAAGCAACGGGCTGAGAAACATTGATCTAGCACTCAGATGGGATAAAGCACACATTCCCGTATTCAATAGCTTCAAGTTTGTGAAGGATGTATCTGTTGAGGATGACTGGGGAAGAGCATTGGCTTTTGCACCAGCACCTTTAACAGGTTTCGATCCAACCCAATTGAATAAAAGAAGGATACGAAGAGGATCTGACCCCATTCACAACAAATGTTGA
Protein sequence
MGFLIHRMATLLLCIWFLALQPEGSNGLRNIDLALRWDKAHIPVFNSFKFVKDVSVEDDWGRALAFAPAPLTGFDPTQLNKRRIRRGSDPIHNKC
Homology
BLAST of Bhi08G000976 vs. ExPASy Swiss-Prot
Match:
O75051 (Plexin-A2 OS=Homo sapiens OX=9606 GN=PLXNA2 PE=1 SV=4)
HSP 1 Score: 45.4 bits (106), Expect = 4.1e-04
Identity = 21/71 (29.58%), Postives = 37/71 (52.11%), Query Frame = 0
Query: 18 LALQPEGSNGLRNIDLALRWDKAHIPVFNSFKFVKDVSV---EDDWGRALAFAPAPLTGF 77
+ + P SNGL + +++ D+AH+ F+++ D V E +W A P +TGF
Sbjct: 1005 VCVSPPSSNGLGPVPVSVSVDRAHVDSNLQFEYIDDPRVQRIEPEWSIASGHTPLTITGF 1064
Query: 78 DPTQLNKRRIR 86
+ + + RIR
Sbjct: 1065 NLDVIQEPRIR 1075
BLAST of Bhi08G000976 vs. ExPASy TrEMBL
Match:
A0A0A0LQI0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G033220 PE=4 SV=1)
HSP 1 Score: 189.5 bits (480), Expect = 6.4e-45
Identity = 85/95 (89.47%), Postives = 89/95 (93.68%), Query Frame = 0
Query: 1 MGFLIHRMATLLLCIWFLALQPEGSNGLRNIDLALRWDKAHIPVFNSFKFVKDVSVEDDW 60
MGFLIHR+ LLLCIWFLALQPEG+NGL NIDLALRWDKAHIP+FNSFKFVKDVSVEDDW
Sbjct: 1 MGFLIHRVTMLLLCIWFLALQPEGTNGLTNIDLALRWDKAHIPIFNSFKFVKDVSVEDDW 60
Query: 61 GRALAFAPAPLTGFDPTQLNKRRIRRGSDPIHNKC 96
GR LAFAPAP TG DPTQLNKRR+RRGSDPIHNKC
Sbjct: 61 GRMLAFAPAPSTGLDPTQLNKRRVRRGSDPIHNKC 95
BLAST of Bhi08G000976 vs. ExPASy TrEMBL
Match:
A0A5D3BHX9 (CLAVATA3/ESR (CLE)-related protein 45 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00900 PE=4 SV=1)
HSP 1 Score: 185.3 bits (469), Expect = 1.2e-43
Identity = 84/95 (88.42%), Postives = 88/95 (92.63%), Query Frame = 0
Query: 1 MGFLIHRMATLLLCIWFLALQPEGSNGLRNIDLALRWDKAHIPVFNSFKFVKDVSVEDDW 60
MGFLIHR+A LLLCIWFLALQPEG+NGL NIDLALRWDKAHIP+F+SFKFVKD SVEDDW
Sbjct: 1 MGFLIHRVAMLLLCIWFLALQPEGTNGLTNIDLALRWDKAHIPIFSSFKFVKDASVEDDW 60
Query: 61 GRALAFAPAPLTGFDPTQLNKRRIRRGSDPIHNKC 96
G LAFAPAP TG DPTQLNKRRIRRGSDPIHNKC
Sbjct: 61 GGMLAFAPAPSTGLDPTQLNKRRIRRGSDPIHNKC 95
BLAST of Bhi08G000976 vs. ExPASy TrEMBL
Match:
M5WYZ5 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G193600 PE=4 SV=1)
HSP 1 Score: 117.9 bits (294), Expect = 2.4e-23
Identity = 56/95 (58.95%), Postives = 69/95 (72.63%), Query Frame = 0
Query: 1 MGFLIHRMATLLLCIWFLALQPEGSNGLRNIDLALRWDKAHIPVFNSFKFVKDVSVEDDW 60
MGFL +R A L +CI FLALQPE +GLR++DLALRWDK H+ S VK V+VED
Sbjct: 1 MGFLAYRSAVLFVCIGFLALQPEKVSGLRSMDLALRWDKGHMSFLKSLHLVKAVAVEDLQ 60
Query: 61 GRALAFAPAPLTGFDPTQLNKRRIRRGSDPIHNKC 96
+ L+ APAP FDP Q NKR++R+GSDPIHN+C
Sbjct: 61 AK-LSLAPAPSMTFDPNQSNKRKVRKGSDPIHNRC 94
BLAST of Bhi08G000976 vs. ExPASy TrEMBL
Match:
A0A314XM06 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_31163 PE=4 SV=1)
HSP 1 Score: 117.9 bits (294), Expect = 2.4e-23
Identity = 56/95 (58.95%), Postives = 69/95 (72.63%), Query Frame = 0
Query: 1 MGFLIHRMATLLLCIWFLALQPEGSNGLRNIDLALRWDKAHIPVFNSFKFVKDVSVEDDW 60
MGFL +R A L +CI FLALQPE +GLR++DLALRWDK H+ S VK V+VED
Sbjct: 1 MGFLAYRSAVLFVCIGFLALQPEKVSGLRSMDLALRWDKGHMSFLKSLHLVKAVAVEDLQ 60
Query: 61 GRALAFAPAPLTGFDPTQLNKRRIRRGSDPIHNKC 96
+ L+ APAP FDP Q NKR++R+GSDPIHN+C
Sbjct: 61 AK-LSLAPAPSMTFDPNQSNKRKVRKGSDPIHNRC 94
BLAST of Bhi08G000976 vs. ExPASy TrEMBL
Match:
A0A2P6P2N1 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0181441 PE=4 SV=1)
HSP 1 Score: 114.8 bits (286), Expect = 2.0e-22
Identity = 56/95 (58.95%), Postives = 69/95 (72.63%), Query Frame = 0
Query: 1 MGFLIHRMATLLLCIWFLALQPEGSNGLRNIDLALRWDKAHIPVFNSFKFVKDVSVEDDW 60
MG L ++ A LL+CI FLALQPE +GLR++DLALRWDK H NS VK V+VED
Sbjct: 1 MGCLAYKGAILLVCIGFLALQPEKVSGLRSMDLALRWDKRHFSFLNSLHVVKAVAVEDLQ 60
Query: 61 GRALAFAPAPLTGFDPTQLNKRRIRRGSDPIHNKC 96
+ L+ APAP FDP+Q NKR +R+GSDPIHN+C
Sbjct: 61 AK-LSLAPAPAMTFDPSQSNKRTVRKGSDPIHNRC 94
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| O75051 | 4.1e-04 | 29.58 | Plexin-A2 OS=Homo sapiens OX=9606 GN=PLXNA2 PE=1 SV=4 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LQI0 | 6.4e-45 | 89.47 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G033220 PE=4 SV=1 | [more] |
| A0A5D3BHX9 | 1.2e-43 | 88.42 | CLAVATA3/ESR (CLE)-related protein 45 OS=Cucumis melo var. makuwa OX=1194695 GN=... | [more] |
| M5WYZ5 | 2.4e-23 | 58.95 | Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G193600 PE=4 SV=1 | [more] |
| A0A314XM06 | 2.4e-23 | 58.95 | Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_311... | [more] |
| A0A2P6P2N1 | 2.0e-22 | 58.95 | Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0181441 PE=4... | [more] |
