Bhi07G000180 (gene) Wax gourd (B227) v1

Overview


Name	Bhi07G000180
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Transcription factor bHLH35-like protein
Location	chr7: 9957126 .. 9958304 (-)
RNA-Seq Expression	Bhi07G000180
Synteny	Bhi07G000180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAACTCATAAAGAGGAAAAGAGAAAAAGCAACCCCCCAACCTAATTTTTAATCCCCACATATAACATATTGTCCTGTATATATATTCGTGTAAGCATCGAAGTATTTACGTACGAATGGAATAAATTAAATATTACATAAGCTTGCAGAGATGGGGTTCCTCTGTTTTTAAATTCACATGATTGTTTCATTTCGCCTTTAAAAACACACACACACACACACAGCATCAGCAATTTTTTTATGCTATAAAAAGCCAGACCCTTCATTTCAGGTCCTATTCTTCACTAACTTTTCTCAATTGGGGAGCAAGTTCAAGTTGAGAGACAAACAAAGAGACAGAGATGGTTTCTACATTACAAAAGAGATTCGATTCACGCAACAAGCTACGCCTTGTTCGATCTCTGGCCACCTATGAATCCTCTGTAATTCCTAAACCATTCTGTTTTTGTTATGTTTTTTGATCTATTCTCTGTTTTGCCACTTCAGTTTGTTTGAGCCATTTAATAACAATCAAGTCCTCTGTTTATACAGGCAAAACAGAGGTGTATGTTCTGGAATGCTGTTCTCTTCATTCATAAGCTTAAACTCAAGCTGGAAGCAATTGAGAGAGAGTATTCAAATCTATTGGCCATGAAAAGAGAATACTTGAACTCAATAAAGCAATTTCATTCCCCCAAGGTCCTTTTTCCCCTCCCTCTCTCTCTTTTAACAATTCAAATTCTTCCTAATATTCATTATAAATCACTGCTAAACTCAAATTTAATGTCTGATTATTAATACATAAAAGCAGGAAGTGAAGGTTGAGAAGAATGGAGAAGAGTTTAAAGTGAAAGTGAGATGCGAAAAGGGAGGGGACAGATTGGTTTCAGTATTAGAAGCATTTGAGAAAATGGGTCTTAATGTTGTGGAAGCTAGAGTTTCATGTACTGAATGTTTTTGTATGGAAGCCATTGCTGTAGCTGAAAATCATCGATTGCTTAATGTCAGTGATATAACTGAAGCTATTAATGTAGCCATTGATGGCAAATTATTAGCTGGAAATCAGCATCACAAAGACATTCCTGAGAATGATGCTGAAATTTAGCCACTTGCTAACCTATCAATTCAATGAAAATGTTTCTTGCTATTCCAATCTTTTGTATTTTCATTTCTTTCTTTCCAATTCAAATTTGAAAATGG

mRNA sequence

CAAACTCATAAAGAGGAAAAGAGAAAAAGCAACCCCCCAACCTAATTTTTAATCCCCACATATAACATATTGTCCTGTATATATATTCGTGTAAGCATCGAAGTATTTACGTACGAATGGAATAAATTAAATATTACATAAGCTTGCAGAGATGGGGTTCCTCTGTTTTTAAATTCACATGATTGTTTCATTTCGCCTTTAAAAACACACACACACACACACAGCATCAGCAATTTTTTTATGCTATAAAAAGCCAGACCCTTCATTTCAGGTCCTATTCTTCACTAACTTTTCTCAATTGGGGAGCAAGTTCAAGTTGAGAGACAAACAAAGAGACAGAGATGGTTTCTACATTACAAAAGAGATTCGATTCACGCAACAAGCTACGCCTTGTTCGATCTCTGGCCACCTATGAATCCTCTGCAAAACAGAGGTGTATGTTCTGGAATGCTGTTCTCTTCATTCATAAGCTTAAACTCAAGCTGGAAGCAATTGAGAGAGAGTATTCAAATCTATTGGCCATGAAAAGAGAATACTTGAACTCAATAAAGCAATTTCATTCCCCCAAGGAAGTGAAGGTTGAGAAGAATGGAGAAGAGTTTAAAGTGAAAGTGAGATGCGAAAAGGGAGGGGACAGATTGGTTTCAGTATTAGAAGCATTTGAGAAAATGGGTCTTAATGTTGTGGAAGCTAGAGTTTCATGTACTGAATGTTTTTGTATGGAAGCCATTGCTGTAGCTGAAAATCATCGATTGCTTAATGTCAGTGATATAACTGAAGCTATTAATGTAGCCATTGATGGCAAATTATTAGCTGGAAATCAGCATCACAAAGACATTCCTGAGAATGATGCTGAAATTTAGCCACTTGCTAACCTATCAATTCAATGAAAATGTTTCTTGCTATTCCAATCTTTTGTATTTTCATTTCTTTCTTTCCAATTCAAATTTGAAAATGG

Coding sequence (CDS)

ATGGTTTCTACATTACAAAAGAGATTCGATTCACGCAACAAGCTACGCCTTGTTCGATCTCTGGCCACCTATGAATCCTCTGCAAAACAGAGGTGTATGTTCTGGAATGCTGTTCTCTTCATTCATAAGCTTAAACTCAAGCTGGAAGCAATTGAGAGAGAGTATTCAAATCTATTGGCCATGAAAAGAGAATACTTGAACTCAATAAAGCAATTTCATTCCCCCAAGGAAGTGAAGGTTGAGAAGAATGGAGAAGAGTTTAAAGTGAAAGTGAGATGCGAAAAGGGAGGGGACAGATTGGTTTCAGTATTAGAAGCATTTGAGAAAATGGGTCTTAATGTTGTGGAAGCTAGAGTTTCATGTACTGAATGTTTTTGTATGGAAGCCATTGCTGTAGCTGAAAATCATCGATTGCTTAATGTCAGTGATATAACTGAAGCTATTAATGTAGCCATTGATGGCAAATTATTAGCTGGAAATCAGCATCACAAAGACATTCCTGAGAATGATGCTGAAATTTAG

Protein sequence

MVSTLQKRFDSRNKLRLVRSLATYESSAKQRCMFWNAVLFIHKLKLKLEAIEREYSNLLAMKREYLNSIKQFHSPKEVKVEKNGEEFKVKVRCEKGGDRLVSVLEAFEKMGLNVVEARVSCTECFCMEAIAVAENHRLLNVSDITEAINVAIDGKLLAGNQHHKDIPENDAEI

Homology

[Close]

BLAST of Bhi07G000180 vs. TAIR 10
Match: AT1G29270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40435.1); Has 98 Blast hits to 98 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 103.6 bits (257), Expect = 1.6e-22
Identity = 63/154 (40.91%), Postives = 101/154 (65.58%), Query Frame = 0


Query: 1   MVSTLQKRFDSRNKLRLVRSLATYESSAKQRCM-FWNAVLFIHKLKLKLEAIEREYSNLL 60
           MV++ QK+  S+ K   +++L  ++ S  ++ M    A+L+I  LKL++EA++REY +L 
Sbjct: 1   MVASEQKKRASQGKPHFLKNLTHFKFSIHEQSMVIREALLYIAMLKLEIEALQREYEDLK 60

Query: 61  AMKREYLNSIKQFHSPKEVKVEKNGEEFKVKVRCEKGGDRLVSVLEAFEKMGLNVVEARV 120
             K+E L      H  +EVKVEK GE F+VK++  +G + LV++LEAFE+MGLNV +AR 
Sbjct: 61  ITKKESL------HQFQEVKVEKIGEMFQVKIKSPRGENNLVNILEAFEEMGLNVAQARA 120

Query: 121 SCTECFCMEAIAVAEN-HRLLNVSDITEAINVAI 153
           SC + F MEAI   ++  +L +V D+T+ +  A+
Sbjct: 121 SCLDSFAMEAIVAPQSKDKLCSVDDLTQTLVKAL 148

[Close]

BLAST of Bhi07G000180 vs. TAIR 10
Match: AT3G56220.1 (transcription regulators )

HSP 1 Score: 56.6 bits (135), Expect = 2.3e-08
Identity = 51/138 (36.96%), Postives = 70/138 (50.72%), Query Frame = 0


Query: 1   MVSTLQKRFDS-RNKLRLVRSLATYESSAKQRCMFWNAVLFIHKLKLKLEAIEREYSNLL 60
           MVS   KR  S R K  L+RS+ T   +  +  +  +A  +I KLK K+E I    ++  
Sbjct: 1   MVSREHKRGSSLREKFHLLRSI-TDSHAESETSIIVDASKYIKKLKQKVEKINNATTS-- 60

Query: 61  AMKREYLNSIKQFHSPKE-VKVEKNGEEFKVKVRCEKG-GDRLVSVLEAFEKMGLNVVEA 120
                   S ++   P   V VE   + F +KV   K     LV VLE FE +GL+VVEA
Sbjct: 61  ------EQSFRESSDPNPMVTVETLEKGFMIKVMSRKNEAGMLVCVLETFEDLGLDVVEA 120

Query: 121 RVSCTECFCMEAIAVAEN 136
           RVSCT+ F + AI  + N
Sbjct: 121 RVSCTDTFSLHAIGSSNN 129

[Close]

BLAST of Bhi07G000180 vs. TAIR 10
Match: AT2G40435.1 (BEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G56220.1); Has 289 Blast hits to 289 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 289; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 56.2 bits (134), Expect = 3.0e-08
Identity = 51/154 (33.12%), Postives = 78/154 (50.65%), Query Frame = 0


Query: 1   MVSTLQKRFDSRNKLRLVRSLATYESSAKQRCMFWNAVLFIHKLKLKLEAIEREYSNLLA 60
           MVS  QKR   + K +L+RS+ T   +     +  +A  +I KLK K+E   ++ +    
Sbjct: 1   MVSREQKRGSLQEKFQLLRSI-TNSHAENDTSIIMDASKYIQKLKQKVERFNQDPT---- 60

Query: 61  MKREYLNSIKQFHSPKEVKVEKNGEEFKVKVRCEKG-GDRLVSVLEAFEKMGLNVVEARV 120
              E  +S         V VE   + F + V   K     LVSVLEAFE +GLNV+EAR 
Sbjct: 61  --AEQSSSEPTDPKTPMVTVETLDKGFMINVFSGKNQPGMLVSVLEAFEDIGLNVLEARA 120

Query: 121 SCTECFCMEAIAVA-ENHRLLNVSDITEAINVAI 153
           SCT+ F + A+ +  E+   ++   + +A+  AI
Sbjct: 121 SCTDSFSLHAMGLENEDGENMDAEAVKQAVTDAI 147

[Close]

BLAST of Bhi07G000180 vs. ExPASy TrEMBL
Match: A0A5A7UBN8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008340 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 8.0e-78
Identity = 155/174 (89.08%), Postives = 164/174 (94.25%), Query Frame = 0


Query: 1   MVSTLQKRFDSRNKLRLVRSLATYESSAKQRCMFWNAVLFIHKLKLKLEAIEREYSNLLA 60
           MVSTLQKRFDSRNKLRLVRSL TYESS +Q C+FWNAVLFIHKLKLKLEAIEREYSNLL 
Sbjct: 1   MVSTLQKRFDSRNKLRLVRSLPTYESSGRQTCVFWNAVLFIHKLKLKLEAIEREYSNLLN 60

Query: 61  MKREYLNSIKQFHSPKEVKVEKNGEEFKVKVRCEKGGDRLVSVLEAFEKMGLNVVEARVS 120
           MKREYLNSIKQFHS KEVKVEKNGEEF+VKVRCEKGGDRLVSVLEAFEKMGLNVVEARVS
Sbjct: 61  MKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKGGDRLVSVLEAFEKMGLNVVEARVS 120

Query: 121 CTECFCMEAIAVAE-NHRLLNVSDITEAINVAIDGKLLAGNQHHKDIPENDAEI 174
           CTECFCMEAIAVAE +H+LLN+SDIT+AINVAID KLLA NQHH DIP NDA++
Sbjct: 121 CTECFCMEAIAVAEDHHQLLNLSDITDAINVAIDPKLLAPNQHHNDIPHNDAQL 174

[Close]

BLAST of Bhi07G000180 vs. ExPASy TrEMBL
Match: E5GC31 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 8.0e-78
Identity = 155/174 (89.08%), Postives = 164/174 (94.25%), Query Frame = 0


Query: 1   MVSTLQKRFDSRNKLRLVRSLATYESSAKQRCMFWNAVLFIHKLKLKLEAIEREYSNLLA 60
           MVSTLQKRFDSRNKLRLVRSL TYESS +Q C+FWNAVLFIHKLKLKLEAIEREYSNLL 
Sbjct: 1   MVSTLQKRFDSRNKLRLVRSLPTYESSGRQTCVFWNAVLFIHKLKLKLEAIEREYSNLLD 60

Query: 61  MKREYLNSIKQFHSPKEVKVEKNGEEFKVKVRCEKGGDRLVSVLEAFEKMGLNVVEARVS 120
           MKREYLNSIKQFHS KEVKVEKNGEEF+VKVRCEKGGDRLVSVLEAFEKMGLNVVEARVS
Sbjct: 61  MKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKGGDRLVSVLEAFEKMGLNVVEARVS 120

Query: 121 CTECFCMEAIAVAE-NHRLLNVSDITEAINVAIDGKLLAGNQHHKDIPENDAEI 174
           CTECFCMEAIAVAE +H+LLN+SDIT+AINVAID KLLA NQHH DIP NDA++
Sbjct: 121 CTECFCMEAIAVAEDHHQLLNLSDITDAINVAIDPKLLAPNQHHNDIPHNDAQL 174

[Close]

BLAST of Bhi07G000180 vs. ExPASy TrEMBL
Match: A0A1S3B049 (uncharacterized protein LOC103484437 OS=Cucumis melo OX=3656 GN=LOC103484437 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 8.0e-78
Identity = 155/174 (89.08%), Postives = 164/174 (94.25%), Query Frame = 0


Query: 1   MVSTLQKRFDSRNKLRLVRSLATYESSAKQRCMFWNAVLFIHKLKLKLEAIEREYSNLLA 60
           MVSTLQKRFDSRNKLRLVRSL TYESS +Q C+FWNAVLFIHKLKLKLEAIEREYSNLL 
Sbjct: 1   MVSTLQKRFDSRNKLRLVRSLPTYESSGRQTCVFWNAVLFIHKLKLKLEAIEREYSNLLD 60

Query: 61  MKREYLNSIKQFHSPKEVKVEKNGEEFKVKVRCEKGGDRLVSVLEAFEKMGLNVVEARVS 120
           MKREYLNSIKQFHS KEVKVEKNGEEF+VKVRCEKGGDRLVSVLEAFEKMGLNVVEARVS
Sbjct: 61  MKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKGGDRLVSVLEAFEKMGLNVVEARVS 120

Query: 121 CTECFCMEAIAVAE-NHRLLNVSDITEAINVAIDGKLLAGNQHHKDIPENDAEI 174
           CTECFCMEAIAVAE +H+LLN+SDIT+AINVAID KLLA NQHH DIP NDA++
Sbjct: 121 CTECFCMEAIAVAEDHHQLLNLSDITDAINVAIDPKLLAPNQHHNDIPHNDAQL 174

[Close]

BLAST of Bhi07G000180 vs. ExPASy TrEMBL
Match: A0A0A0KHW9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519710 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 6.8e-77
Identity = 156/175 (89.14%), Postives = 164/175 (93.71%), Query Frame = 0


Query: 1   MVSTLQKRFDSRNKLRLVRSLATYESSAKQRCMFWNAVLFIHKLKLKLEAIEREYSNLLA 60
           MVSTLQKRFDSRNKLRLVRSL TYESS +QRC+FWNAVLFIHKLKLKLEAIEREYSNLL 
Sbjct: 1   MVSTLQKRFDSRNKLRLVRSLPTYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLLD 60

Query: 61  MKREYLNSIKQFHSPKEVKVEKNGEEFKVKVRCEKGGDRLVSVLEAFEKMGLNVVEARVS 120
           MKREYLNSIKQFHS KEVKVEKNGEEF+VKVRCEKGGDRLVSVLEAFEKMGLNVVEARVS
Sbjct: 61  MKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKGGDRLVSVLEAFEKMGLNVVEARVS 120

Query: 121 CTECFCMEAIAVAE-NHRLLNVSDITEAINVAIDGKLLAGNQHHKD-IPENDAEI 174
           CTECFCMEA AVAE +H+LLN+SDITEAINVAID KLLA NQHH D IP NDA++
Sbjct: 121 CTECFCMEATAVAEDHHQLLNLSDITEAINVAIDPKLLAPNQHHNDSIPHNDAQL 175

[Close]

BLAST of Bhi07G000180 vs. ExPASy TrEMBL
Match: A0A6J1IR65 (uncharacterized protein LOC111478631 OS=Cucurbita maxima OX=3661 GN=LOC111478631 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 7.5e-68
Identity = 136/173 (78.61%), Postives = 152/173 (87.86%), Query Frame = 0


Query: 1   MVSTLQKRFDSRNKLRLVRSLATYESSAKQRCMFWNAVLFIHKLKLKLEAIEREYSNLLA 60
           MVST QKRFDSR KLRLVRSL TY+SS KQ   FWNAVLF+HKLKLKLEAIEREYSNLL+
Sbjct: 1   MVSTFQKRFDSRKKLRLVRSLPTYQSSGKQSSEFWNAVLFLHKLKLKLEAIEREYSNLLS 60

Query: 61  MKREYLNSIKQFHSPKEVKVEKNGEEFKVKVRCEKGGDRLVSVLEAFEKMGLNVVEARVS 120
           MKREYLNS+KQ H+PKEVKVEK GEEF+VKVRCEKGGDRLV+VLEAF+KMGLNV++A+VS
Sbjct: 61  MKREYLNSVKQIHAPKEVKVEKVGEEFRVKVRCEKGGDRLVTVLEAFDKMGLNVLQAKVS 120

Query: 121 CTECFCMEAIAVAENHRLLNVSDITEAINVAIDGKLLAGNQHHKDIPENDAEI 174
           C+ECF MEAIAVAE+ + LN+ DITEAIN AIDGK LA NQ  K+ PE D EI
Sbjct: 121 CSECFSMEAIAVAEDEQSLNICDITEAINAAIDGKSLAANQQQKETPEKDDEI 173

The following BLAST results are available for this feature:

BLAST of Bhi07G000180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29270.1	1.6e-22	40.91	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G56220.1	2.3e-08	36.96	transcription regulators	[more]
AT2G40435.1	3.0e-08	33.12	BEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G5...	[more]

BLAST of Bhi07G000180 vs. TAIR 10


Match Name	E-value	Identity	Description

BLAST of Bhi07G000180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UBN8	8.0e-78	89.08	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
E5GC31	8.0e-78	89.08	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S3B049	8.0e-78	89.08	uncharacterized protein LOC103484437 OS=Cucumis melo OX=3656 GN=LOC103484437 PE=...	[more]
A0A0A0KHW9	6.8e-77	89.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519710 PE=4 SV=1	[more]
A0A6J1IR65	7.5e-68	78.61	uncharacterized protein LOC111478631 OS=Cucurbita maxima OX=3661 GN=LOC111478631...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 41..68
None	No IPR available	PANTHER	PTHR31945:SF27	TRANSCRIPTION FACTOR BHLH35-LIKE PROTEIN	coord: 1..155
None	No IPR available	PANTHER	PTHR31945	TRANSCRIPTION FACTOR SCREAM2-RELATED	coord: 1..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi07M000180	Bhi07M000180	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding