Bhi07G000047 (gene) Wax gourd (B227) v1

Overview
NameBhi07G000047
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
Descriptioncalmodulin-like
Locationchr7: 2795086 .. 2795704 (+)
RNA-Seq ExpressionBhi07G000047
SyntenyBhi07G000047
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTCTCCTAGAAACAAAGATAGCACGATTACAATAATGTGCATCCCACGTCTTCAAGTTTTGATGGCCAAGTATGAAGCAAATAAGTTGGTCAAGAAGCATGAAAAAAATGGTGAAGGTGTTAAACTAAAACGTCTCAATGCCATTGCTCGAGGTTCAACTCAAATCAACAATAATCAAGGAATGGAAACGAAAATATTAAAAGCTAACGACCATGTTGCGCTCAAGTTTAGTTCAAATGTTCATATAAAACCAAATAAGCAAATAGGAGGAAAAGCTCACGTACCTACCTCAAGAGTTCTTGATATAAAGGCGTCTAGAATGCAATTTAGTCGAGAGCAGATAAAGGAGATTTTTCAATACCATGATAGCGACAATGATGGTTTTCTCAACATAAAGGAGGTAACAAAAGCTTTTGGTTTCCTTGGCTCAATTCTTCCATTCTACAAAGCCTACCATGGGATGGTGTATGCTGATACTAATAATGATGGCCTTATCAGTGAGGATGAACTCGAAAAACTCATTGATTATGCGATTAAATTTATCAATAAGAAATGATTTTTTGAGCTACATAAACACGAATTTTATGTACTAAAGTAAATTTGCATTTTCAAGTCAAC

mRNA sequence

ATTCTCCTAGAAACAAAGATAGCACGATTACAATAATGTGCATCCCACGTCTTCAAGTTTTGATGGCCAAGTATGAAGCAAATAAGTTGGTCAAGAAGCATGAAAAAAATGGTGAAGGTGTTAAACTAAAACGTCTCAATGCCATTGCTCGAGGTTCAACTCAAATCAACAATAATCAAGGAATGGAAACGAAAATATTAAAAGCTAACGACCATGTTGCGCTCAAGTTTAGTTCAAATGTTCATATAAAACCAAATAAGCAAATAGGAGGAAAAGCTCACGTACCTACCTCAAGAGTTCTTGATATAAAGGCGTCTAGAATGCAATTTAGTCGAGAGCAGATAAAGGAGATTTTTCAATACCATGATAGCGACAATGATGGTTTTCTCAACATAAAGGAGGTAACAAAAGCTTTTGGTTTCCTTGGCTCAATTCTTCCATTCTACAAAGCCTACCATGGGATGGTGTATGCTGATACTAATAATGATGGCCTTATCAGTGAGGATGAACTCGAAAAACTCATTGATTATGCGATTAAATTTATCAATAAGAAATGATTTTTTGAGCTACATAAACACGAATTTTATGTACTAAAGTAAATTTGCATTTTCAAGTCAAC

Coding sequence (CDS)

TCTCCTAGAAACAAAGATAGCACGATTACAATAATGTGCATCCCACGTCTTCAAGTTTTGATGGCCAAGTATGAAGCAAATAAGTTGGTCAAGAAGCATGAAAAAAATGGTGAAGGTGTTAAACTAAAACGTCTCAATGCCATTGCTCGAGGTTCAACTCAAATCAACAATAATCAAGGAATGGAAACGAAAATATTAAAAGCTAACGACCATGTTGCGCTCAAGTTTAGTTCAAATGTTCATATAAAACCAAATAAGCAAATAGGAGGAAAAGCTCACGTACCTACCTCAAGAGTTCTTGATATAAAGGCGTCTAGAATGCAATTTAGTCGAGAGCAGATAAAGGAGATTTTTCAATACCATGATAGCGACAATGATGGTTTTCTCAACATAAAGGAGGTAACAAAAGCTTTTGGTTTCCTTGGCTCAATTCTTCCATTCTACAAAGCCTACCATGGGATGGTGTATGCTGATACTAATAATGATGGCCTTATCAGTGAGGATGAACTCGAAAAACTCATTGATTATGCGATTAAATTTATCAATAAGAAATGA

Protein sequence

SPRNKDSTITIMCIPRLQVLMAKYEANKLVKKHEKNGEGVKLKRLNAIARGSTQINNNQGMETKILKANDHVALKFSSNVHIKPNKQIGGKAHVPTSRVLDIKASRMQFSREQIKEIFQYHDSDNDGFLNIKEVTKAFGFLGSILPFYKAYHGMVYADTNNDGLISEDELEKLIDYAIKFINKK
Homology
BLAST of Bhi07G000047 vs. TAIR 10
Match: AT3G50770.1 (calmodulin-like 41 )

HSP 1 Score: 42.0 bits (97), Expect = 6.2e-04
Identity = 32/120 (26.67%), Postives = 54/120 (45.00%), Query Frame = 0

Query: 56  NNNQGMETKILKANDHVALKFSSNVHIKPNKQIGGKAHVPTSRVLDIKASRM-QFSREQI 115
           N+ +   TK LK N    L F  N    P        + P S   D    +  Q S+E++
Sbjct: 11  NSFKWFSTKTLKLN----LSF-QNRRRSPKSNSSSTLNSPRSNSDDNNNIKSHQASKEEL 70

Query: 116 KEIFQYHDSDNDGFLNIKEVTKAFGFLGSILPFYKAYHGMVYADTNNDGLISEDELEKLI 175
           +++F + DSD DG ++  E+   FG +G  +    A   +   DT+ DG +  ++   L+
Sbjct: 71  RQVFSHFDSDGDGKISAFELRHYFGSVGEYISHEAAQEAINEVDTDADGSLGFEDFVGLM 125

BLAST of Bhi07G000047 vs. ExPASy TrEMBL
Match: A0A0A0KLF3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G067670 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 1.2e-58
Identity = 123/173 (71.10%), Postives = 136/173 (78.61%), Query Frame = 0

Query: 12  MCIPRLQVLMAKYEANKLVKKHEKNGEGVKLKRLNAIARGSTQINNNQGMETKILKANDH 71
           M IP+LQ+  AKYEA+KL+KK+E+NGEGV L   N  ARGSTQIN N+ M TK LK ND 
Sbjct: 28  MHIPQLQMSKAKYEASKLMKKYEQNGEGVILSAFNDNARGSTQINTNREMATKKLKPNDD 87

Query: 72  VALKFSSNVHIKPNKQIGGKAHVPTSRVLDIKASRMQFSREQIKEIFQYHDSDNDGFLNI 131
           VA K SSN  +K N QI GKA VP  RV D KAS MQFSREQIKEIFQY+DSD DGFLNI
Sbjct: 88  VAHKLSSNAQLKSNNQIRGKAQVPIKRVYDTKASNMQFSREQIKEIFQYYDSDRDGFLNI 147

Query: 132 KEVTKAFGFLGSILPFYKAYHGMVYADTNNDGLISEDELEKLIDYAIKFINKK 185
           +EVTKAF  LGSI PF KAYHGMVYADTN DGLI EDEL+KLI+YA KF+ KK
Sbjct: 148 REVTKAFALLGSIFPFNKAYHGMVYADTNKDGLIGEDELDKLINYANKFMKKK 200

BLAST of Bhi07G000047 vs. ExPASy TrEMBL
Match: A0A0A0KIY4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G068170 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 6.4e-57
Identity = 122/176 (69.32%), Postives = 140/176 (79.55%), Query Frame = 0

Query: 12  MCIPRLQVLMAKYEANKLVKKHEKNGEGVKLKRLNAIARGSTQINNNQGMETK-ILKAND 71
           M I  LQV  AKYEA+KL+KKHE N EGV LK  N I   ST+INN Q M T+ ILK ++
Sbjct: 1   MYISNLQVSKAKYEASKLMKKHENNDEGVPLKAFNGIPPASTKINNKQAMATEIILKPSN 60

Query: 72  H-VALKFSSNVHIKPNKQIG-GKAHVPTSRVLDIKASRMQFSREQIKEIFQYHDSDNDGF 131
           H VA   +SN ++ P+KQ+G GKA V T+ VLDIKAS MQFSREQIKEIFQYHDSDNDGF
Sbjct: 61  HPVAHYLTSNAYMIPSKQLGAGKAQVTTTSVLDIKASNMQFSREQIKEIFQYHDSDNDGF 120

Query: 132 LNIKEVTKAFGFLGSILPFYKAYHGMVYADTNNDGLISEDELEKLIDYAIKFINKK 185
           LN++EVTKAF FLG+ILP YKAYHGMVYAD N DGLIS+DELEKL+DYA KF NK+
Sbjct: 121 LNLREVTKAFAFLGTILPLYKAYHGMVYADANKDGLISKDELEKLVDYAYKFFNKR 176

BLAST of Bhi07G000047 vs. ExPASy TrEMBL
Match: A0A5A7VI66 (Putative calcium-binding protein CML11 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G001550 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 1.0e-46
Identity = 104/173 (60.12%), Postives = 127/173 (73.41%), Query Frame = 0

Query: 12  MCIPRLQVLMAKYEANKLVKKHEKNGEGVKLKRLNAIARGSTQINNNQGMETKILKANDH 71
           M I +LQ  MA YEA   +K +EK+G+ V++K  N + R STQI   QG+  KILK++D 
Sbjct: 1   MYISKLQASMAMYEARMFIKHYEKDGDAVQVKGFNDV-RSSTQI-GYQGIVPKILKSSDD 60

Query: 72  VALKFSSNVHIKPNKQIGGKAHVPTSRVLDIKASRMQFSREQIKEIFQYHDSDNDGFLNI 131
           VA K S   HI+P +Q GGK     +R LDIK+S M FSR+QIKEIF+YHD++NDGFLNI
Sbjct: 61  VAHKLSLEAHIQPTQQTGGKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNNDGFLNI 120

Query: 132 KEVTKAFGFLGSILPFYKAYHGMVYADTNNDGLISEDELEKLIDYAIKFINKK 185
            E+TKAF FLGS+ PFYKA +GMVYAD N DGLISE EL+KLIDYA K I KK
Sbjct: 121 VELTKAFAFLGSMFPFYKACYGMVYADANADGLISEAELDKLIDYATKIIKKK 171

BLAST of Bhi07G000047 vs. ExPASy TrEMBL
Match: A0A0A0KMQ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G067410 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 3.9e-46
Identity = 103/173 (59.54%), Postives = 127/173 (73.41%), Query Frame = 0

Query: 12  MCIPRLQVLMAKYEANKLVKKHEKNGEGVKLKRLNAIARGSTQINNNQGMETKILKANDH 71
           M I +LQ  MA YEA+ L+K++EKNG+ VK+K  + + R STQI N + +  KILK +D 
Sbjct: 1   MYISKLQASMAMYEASMLIKQYEKNGDAVKVKAFDDV-RSSTQIGNRESV-LKILKPSDG 60

Query: 72  VALKFSSNVHIKPNKQIGGKAHVPTSRVLDIKASRMQFSREQIKEIFQYHDSDNDGFLNI 131
           VA K  S  HI+P ++ GGK     +RVLD K+S M  SRE+IKEIFQYHD++NDGFLN 
Sbjct: 61  VAHKLRSEAHIQPTQRTGGKGKKSITRVLDRKSSNMSLSRERIKEIFQYHDNNNDGFLNR 120

Query: 132 KEVTKAFGFLGSILPFYKAYHGMVYADTNNDGLISEDELEKLIDYAIKFINKK 185
            E+TKAF FLGS+ PFYKA +GMVYAD N DGLISE EL+KLIDYA K I KK
Sbjct: 121 MELTKAFAFLGSMFPFYKACYGMVYADANEDGLISEAELDKLIDYASKIIKKK 171

BLAST of Bhi07G000047 vs. ExPASy TrEMBL
Match: A0A6J1EP72 (calmodulin-2/4-like OS=Cucurbita moschata OX=3662 GN=LOC111436455 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.9e-45
Identity = 102/173 (58.96%), Postives = 123/173 (71.10%), Query Frame = 0

Query: 12  MCIPRLQVLMAKYEANKLVKKHEKNGEGVKLKRLNAIARGSTQINNNQGMETKILKANDH 71
           M IP+LQ  MAKYEA++++KK  +NG+ V+LK  N IAR STQ+ NNQ M  +IL+ N +
Sbjct: 1   MFIPKLQASMAKYEASEMIKKSTRNGDNVQLKAFNGIARASTQV-NNQSMVPEILRDNKN 60

Query: 72  VALKFSSNVHIKPNKQIGGKAHVPTSRVLDIKASRMQFSREQIKEIFQYHDSDNDGFLNI 131
           V  KFSSN H                    +KAS MQFSREQ+KEIF+YHDSD DGFLNI
Sbjct: 61  VGPKFSSNTH--------------------LKASNMQFSREQMKEIFRYHDSDKDGFLNI 120

Query: 132 KEVTKAFGFLGSILPFYKAYHGMVYADTNNDGLISEDELEKLIDYAIKFINKK 185
           +E+TKAF FLGSI+PF KA +GM YAD N DGLISE EL+KL+DYA KFI KK
Sbjct: 121 RELTKAFAFLGSIIPFEKASYGMTYADANKDGLISEAELDKLVDYAQKFIKKK 152

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT3G50770.16.2e-0426.67calmodulin-like 41 [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KLF31.2e-5871.10Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G067670 PE=4 SV=1[more]
A0A0A0KIY46.4e-5769.32Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G068170 PE=4 SV=1[more]
A0A5A7VI661.0e-4660.12Putative calcium-binding protein CML11 OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A0A0KMQ13.9e-4659.54Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G067410 PE=4 SV=1[more]
A0A6J1EP721.9e-4558.96calmodulin-2/4-like OS=Cucurbita moschata OX=3662 GN=LOC111436455 PE=4 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 111..173
e-value: 4.2E-8
score: 33.5
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 109..144
score: 12.449146
NoneNo IPR availableGENE3D1.10.238.10coord: 22..177
e-value: 1.1E-11
score: 46.9
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 122..134
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 158..170
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 105..173

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi07M000047Bhi07M000047mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding