CsaV3_2G015850.1 (mRNA) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_2G015850.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Chaperone protein dnaJ 11
Location	chr2: 13149526 .. 13150014 (+)
Sequence length	366
RNA-Seq Expression	CsaV3_2G015850.1
Synteny	CsaV3_2G015850.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCACTTCCTCAGTCCTAGCATCCACAACCGGGGTTCGCTTCACCCGTTCCTCCTTTTACGAAGTTCTTGGGATTCCTATGACAGCTTCTTCCCGGGAAATCAAGGCGGCTTACCGGAAGCTAGCGAGAACCTGTCATCCCGACGTTGTGGCCGAGAATTCAGCGGAGGAGTTTATTAAAATTCAAACGGCGTATTCAACATTGTCGGATCCGGATAAAAGGGCGGATTACGACAGGGAGATTTGCAGAGCTCAATTGCTTTCGGTTTCGGGGTTGTCGTCTCGGACGCCTGTCTCGGGTTATTCCGGTTACTACACACGGCGAAATTGGGAATCGGATCAATGTTGGTAGTGAAATTGAAATTTGAAATGTGACCCAGAAATGGAAAGCGGATATATATTTTGAGGAGATCTGTTTTGGATATAAACAGATCTGATTCCATCTGAATATCGAAGAATTTGGAGAAAATTGGAAATGGGATTATGA

mRNA sequence

ATGCCCACTTCCTCAGTCCTAGCATCCACAACCGGGGTTCGCTTCACCCGTTCCTCCTTTTACGAAGTTCTTGGGATTCCTATGACAGCTTCTTCCCGGGAAATCAAGGCGGCTTACCGGAAGCTAGCGAGAACCTGTCATCCCGACGTTGTGGCCGAGAATTCAGCGGAGGAGTTTATTAAAATTCAAACGGCGTATTCAACATTGTCGGATCCGGATAAAAGGGCGGATTACGACAGGGAGATTTGCAGAGCTCAATTGCTTTCGGTTTCGGGGTTGTCGTCTCGGACGCCTGTCTCGGGTTATTCCGATCTGATTCCATCTGAATATCGAAGAATTTGGAGAAAATTGGAAATGGGATTATGA

Coding sequence (CDS)

ATGCCCACTTCCTCAGTCCTAGCATCCACAACCGGGGTTCGCTTCACCCGTTCCTCCTTTTACGAAGTTCTTGGGATTCCTATGACAGCTTCTTCCCGGGAAATCAAGGCGGCTTACCGGAAGCTAGCGAGAACCTGTCATCCCGACGTTGTGGCCGAGAATTCAGCGGAGGAGTTTATTAAAATTCAAACGGCGTATTCAACATTGTCGGATCCGGATAAAAGGGCGGATTACGACAGGGAGATTTGCAGAGCTCAATTGCTTTCGGTTTCGGGGTTGTCGTCTCGGACGCCTGTCTCGGGTTATTCCGATCTGATTCCATCTGAATATCGAAGAATTTGGAGAAAATTGGAAATGGGATTATGA

Protein sequence

MPTSSVLASTTGVRFTRSSFYEVLGIPMTASSREIKAAYRKLARTCHPDVVAENSAEEFIKIQTAYSTLSDPDKRADYDREICRAQLLSVSGLSSRTPVSGYSDLIPSEYRRIWRKLEMGL*

Homology

[Close]

BLAST of CsaV3_2G015850.1 vs. NCBI nr
Match: KGN61956.2 (hypothetical protein Csa_006153 [Cucumis sativus])

HSP 1 Score: 240.0 bits (611), Expect = 1.1e-59
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 1   MPTSSVLASTTGVRFTRSSFYEVLGIPMTASSREIKAAYRKLARTCHPDVVAENSAEEFI 60
           MPTSSVLASTTGVRFTRSSFYEVLGIPMTASSREIKAAYRKLARTCHPDVVAENSAEEFI
Sbjct: 1   MPTSSVLASTTGVRFTRSSFYEVLGIPMTASSREIKAAYRKLARTCHPDVVAENSAEEFI 60

Query: 61  KIQTAYSTLSDPDKRADYDREICRAQLLSVSGLSSRTPVSGYSDLIPSEYRRIWRKLEMG 120
           KIQTAYSTLSDPDKRADYDREICRAQLLSVSGLSSRTPVSGYSDLIPSEYRRIWRKLEMG
Sbjct: 61  KIQTAYSTLSDPDKRADYDREICRAQLLSVSGLSSRTPVSGYSDLIPSEYRRIWRKLEMG 120

Query: 121 L 122
           L
Sbjct: 121 L 121

[Close]

BLAST of CsaV3_2G015850.1 vs. NCBI nr
Match: AVN99018.1 (hypothetical protein [Cucumis sativus])

HSP 1 Score: 201.8 bits (512), Expect = 3.3e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MPTSSVLASTTGVRFTRSSFYEVLGIPMTASSREIKAAYRKLARTCHPDVVAENSAEEFI 60
           MPTSSVLASTTGVRFTRSSFYEVLGIPMTASSREIKAAYRKLARTCHPDVVAENSAEEFI
Sbjct: 29  MPTSSVLASTTGVRFTRSSFYEVLGIPMTASSREIKAAYRKLARTCHPDVVAENSAEEFI 88

Query: 61  KIQTAYSTLSDPDKRADYDREICRAQLLSVSGLSSRTPVSGYS 104
           KIQTAYSTLSDPDKRADYDREICRAQLLSVSGLSSRTPVSGYS
Sbjct: 89  KIQTAYSTLSDPDKRADYDREICRAQLLSVSGLSSRTPVSGYS 131

[Close]

BLAST of CsaV3_2G015850.1 vs. NCBI nr
Match: XP_004147068.3 (chaperone protein dnaJ 11, chloroplastic [Cucumis sativus])

HSP 1 Score: 201.8 bits (512), Expect = 3.3e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MPTSSVLASTTGVRFTRSSFYEVLGIPMTASSREIKAAYRKLARTCHPDVVAENSAEEFI 60
           MPTSSVLASTTGVRFTRSSFYEVLGIPMTASSREIKAAYRKLARTCHPDVVAENSAEEFI
Sbjct: 1   MPTSSVLASTTGVRFTRSSFYEVLGIPMTASSREIKAAYRKLARTCHPDVVAENSAEEFI 60

Query: 61  KIQTAYSTLSDPDKRADYDREICRAQLLSVSGLSSRTPVSGYS 104
           KIQTAYSTLSDPDKRADYDREICRAQLLSVSGLSSRTPVSGYS
Sbjct: 61  KIQTAYSTLSDPDKRADYDREICRAQLLSVSGLSSRTPVSGYS 103

[Close]

BLAST of CsaV3_2G015850.1 vs. NCBI nr
Match: TYJ99564.1 (chaperone protein dnaJ 11 [Cucumis melo var. makuwa])

HSP 1 Score: 182.2 bits (461), Expect = 2.7e-42
Identity = 95/109 (87.16%), Postives = 99/109 (90.83%), Query Frame = 0


Query: 1   MPTSSVLASTTGVRF------TRSSFYEVLGIPMTASSREIKAAYRKLARTCHPDVVAEN 60
           MPTS ++AS TGVRF      +RSSFYEVLGIPMTAS REIKAAYRKLAR CHPDVVAEN
Sbjct: 1   MPTSPLVASATGVRFARDLSVSRSSFYEVLGIPMTASCREIKAAYRKLARICHPDVVAEN 60

Query: 61  SAEEFIKIQTAYSTLSDPDKRADYDREICRAQLLSVSGLSSRTPVSGYS 104
           SAEEFIKIQTAYSTLSDPDKRADYDREICRAQL+SVSGLSSRTPVSGYS
Sbjct: 61  SAEEFIKIQTAYSTLSDPDKRADYDREICRAQLVSVSGLSSRTPVSGYS 109

[Close]

BLAST of CsaV3_2G015850.1 vs. NCBI nr
Match: XP_008457665.1 (PREDICTED: chaperone protein dnaJ 11, chloroplastic-like [Cucumis melo] >KAA0045716.1 chaperone protein dnaJ 11 [Cucumis melo var. makuwa])

HSP 1 Score: 182.2 bits (461), Expect = 2.7e-42
Identity = 95/109 (87.16%), Postives = 99/109 (90.83%), Query Frame = 0


Query: 1   MPTSSVLASTTGVRF------TRSSFYEVLGIPMTASSREIKAAYRKLARTCHPDVVAEN 60
           MPTS ++AS TGVRF      +RSSFYEVLGIPMTAS REIKAAYRKLAR CHPDVVAEN
Sbjct: 29  MPTSPLVASATGVRFARDLSVSRSSFYEVLGIPMTASCREIKAAYRKLARICHPDVVAEN 88

Query: 61  SAEEFIKIQTAYSTLSDPDKRADYDREICRAQLLSVSGLSSRTPVSGYS 104
           SAEEFIKIQTAYSTLSDPDKRADYDREICRAQL+SVSGLSSRTPVSGYS
Sbjct: 89  SAEEFIKIQTAYSTLSDPDKRADYDREICRAQLVSVSGLSSRTPVSGYS 137

[Close]

BLAST of CsaV3_2G015850.1 vs. ExPASy Swiss-Prot
Match: Q9FYB5 (Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATJ11 PE=1 SV=2)

HSP 1 Score: 83.6 bits (205), Expect = 1.7e-15
Identity = 43/86 (50.00%), Postives = 60/86 (69.77%), Query Frame = 0


Query: 18  SSFYEVLGIPMTASSREIKAAYRKLARTCHPDV-----VAENSAEEFIKIQTAYSTLSDP 77
           +S Y+VL +P+ A+S++IK+AYR+LAR CHPDV      + +SA+EF+KI  AY TLSDP
Sbjct: 64  ASLYDVLEVPLGATSQDIKSAYRRLARICHPDVAGTDRTSSSSADEFMKIHAAYCTLSDP 123

Query: 78  DKRADYDREICRAQ---LLSVSGLSS 96
           +KR+ YDR + R      +  SGL S
Sbjct: 124 EKRSVYDRRMLRRSRPLTVGTSGLGS 149

[Close]

BLAST of CsaV3_2G015850.1 vs. ExPASy Swiss-Prot
Match: Q5WHG0 (Chaperone protein DnaJ OS=Bacillus clausii (strain KSM-K16) OX=66692 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 5.2e-12
Identity = 39/91 (42.86%), Postives = 53/91 (58.24%), Query Frame = 0


Query: 16  TRSSFYEVLGIPMTASSREIKAAYRKLARTCHPDVVAENSAE-EFIKIQTAYSTLSDPDK 75
           ++  +YEVLG+   AS  E+K AYRKLAR  HPDV  E  AE +F +++ AY TLSDP K
Sbjct: 2   SKRDYYEVLGVDRNASVEEVKKAYRKLARKYHPDVNKEEDAEAKFKEVKEAYDTLSDPQK 61

Query: 76  RADYDREICRAQLLSVSGLSSRTPVSGYSDL 106
           +A YD+           G  +     G+SD+
Sbjct: 62  KARYDQFGHADPNQGFGGAGASGDFGGFSDI 92

[Close]

BLAST of CsaV3_2G015850.1 vs. ExPASy Swiss-Prot
Match: Q3AF07 (Chaperone protein DnaJ OS=Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 / Z-2901) OX=246194 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.5e-11
Identity = 35/66 (53.03%), Postives = 46/66 (69.70%), Query Frame = 0


Query: 17 RSSFYEVLGIPMTASSREIKAAYRKLARTCHPDVVAE--NSAEEFIKIQTAYSTLSDPDK 76
          +  +YE+LG+   A+  EIK AYRKLAR  HPDV  +  N+AE+F +I  AY  LSDP+K
Sbjct: 2  KRDYYEILGVARNATPEEIKKAYRKLARKYHPDVNKDDPNAAEKFKEINEAYEVLSDPEK 61

Query: 77 RADYDR 81
          RA YD+
Sbjct: 62 RARYDQ 67

[Close]

BLAST of CsaV3_2G015850.1 vs. ExPASy Swiss-Prot
Match: Q67S53 (Chaperone protein DnaJ OS=Symbiobacterium thermophilum (strain T / IAM 14863) OX=292459 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.5e-11
Identity = 37/93 (39.78%), Postives = 55/93 (59.14%), Query Frame = 0


Query: 14  RFTRSSFYEVLGIPMTASSREIKAAYRKLARTCHPDVVAE--NSAEEFIKIQTAYSTLSD 73
           R  +  +YE+LG+P  A+  EIK A+R LAR  HPD   +  ++AE+F +I  AY  LSD
Sbjct: 3   RLAKRDYYEILGVPRNATEAEIKKAFRNLARKYHPDANKDDPDAAEKFKEINEAYQVLSD 62

Query: 74  PDKRADYDREICRAQLLSVSGLSSRTPVSGYSD 105
           P+KRA YD+    A+ +  +G +      G+ D
Sbjct: 63  PEKRARYDQFGHAAEQMGGAGGNPFEGFGGFGD 95

[Close]

BLAST of CsaV3_2G015850.1 vs. ExPASy Swiss-Prot
Match: B5YAR4 (Chaperone protein DnaJ OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) OX=309799 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.0e-11
Identity = 34/66 (51.52%), Postives = 45/66 (68.18%), Query Frame = 0


Query: 16 TRSSFYEVLGIPMTASSREIKAAYRKLARTCHPDVVAENSA-EEFIKIQTAYSTLSDPDK 75
          T+  +YE+LG+P  A+  EIK AYR+L R  HPD+  + SA E+F +I  AY  LSDP K
Sbjct: 3  TKKDYYEILGVPRNATQDEIKQAYRRLVRQYHPDLNKDPSAHEKFKEINEAYEVLSDPQK 62

Query: 76 RADYDR 81
          RA YD+
Sbjct: 63 RAQYDQ 68

[Close]

BLAST of CsaV3_2G015850.1 vs. ExPASy TrEMBL
Match: A0A0A0LJE1 (J domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G264570 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.6e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MPTSSVLASTTGVRFTRSSFYEVLGIPMTASSREIKAAYRKLARTCHPDVVAENSAEEFI 60
           MPTSSVLASTTGVRFTRSSFYEVLGIPMTASSREIKAAYRKLARTCHPDVVAENSAEEFI
Sbjct: 29  MPTSSVLASTTGVRFTRSSFYEVLGIPMTASSREIKAAYRKLARTCHPDVVAENSAEEFI 88

Query: 61  KIQTAYSTLSDPDKRADYDREICRAQLLSVSGLSSRTPVSGYS 104
           KIQTAYSTLSDPDKRADYDREICRAQLLSVSGLSSRTPVSGYS
Sbjct: 89  KIQTAYSTLSDPDKRADYDREICRAQLLSVSGLSSRTPVSGYS 131

[Close]

BLAST of CsaV3_2G015850.1 vs. ExPASy TrEMBL
Match: A0A5A7TUA5 (Chaperone protein dnaJ 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G002360 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.3e-42
Identity = 95/109 (87.16%), Postives = 99/109 (90.83%), Query Frame = 0


Query: 1   MPTSSVLASTTGVRF------TRSSFYEVLGIPMTASSREIKAAYRKLARTCHPDVVAEN 60
           MPTS ++AS TGVRF      +RSSFYEVLGIPMTAS REIKAAYRKLAR CHPDVVAEN
Sbjct: 29  MPTSPLVASATGVRFARDLSVSRSSFYEVLGIPMTASCREIKAAYRKLARICHPDVVAEN 88

Query: 61  SAEEFIKIQTAYSTLSDPDKRADYDREICRAQLLSVSGLSSRTPVSGYS 104
           SAEEFIKIQTAYSTLSDPDKRADYDREICRAQL+SVSGLSSRTPVSGYS
Sbjct: 89  SAEEFIKIQTAYSTLSDPDKRADYDREICRAQLVSVSGLSSRTPVSGYS 137

[Close]

BLAST of CsaV3_2G015850.1 vs. ExPASy TrEMBL
Match: A0A5D3BKM0 (Chaperone protein dnaJ 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001340 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.3e-42
Identity = 95/109 (87.16%), Postives = 99/109 (90.83%), Query Frame = 0


Query: 1   MPTSSVLASTTGVRF------TRSSFYEVLGIPMTASSREIKAAYRKLARTCHPDVVAEN 60
           MPTS ++AS TGVRF      +RSSFYEVLGIPMTAS REIKAAYRKLAR CHPDVVAEN
Sbjct: 1   MPTSPLVASATGVRFARDLSVSRSSFYEVLGIPMTASCREIKAAYRKLARICHPDVVAEN 60

Query: 61  SAEEFIKIQTAYSTLSDPDKRADYDREICRAQLLSVSGLSSRTPVSGYS 104
           SAEEFIKIQTAYSTLSDPDKRADYDREICRAQL+SVSGLSSRTPVSGYS
Sbjct: 61  SAEEFIKIQTAYSTLSDPDKRADYDREICRAQLVSVSGLSSRTPVSGYS 109

[Close]

BLAST of CsaV3_2G015850.1 vs. ExPASy TrEMBL
Match: A0A1S3C7B4 (chaperone protein dnaJ 11, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103497311 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.3e-42
Identity = 95/109 (87.16%), Postives = 99/109 (90.83%), Query Frame = 0


Query: 1   MPTSSVLASTTGVRF------TRSSFYEVLGIPMTASSREIKAAYRKLARTCHPDVVAEN 60
           MPTS ++AS TGVRF      +RSSFYEVLGIPMTAS REIKAAYRKLAR CHPDVVAEN
Sbjct: 29  MPTSPLVASATGVRFARDLSVSRSSFYEVLGIPMTASCREIKAAYRKLARICHPDVVAEN 88

Query: 61  SAEEFIKIQTAYSTLSDPDKRADYDREICRAQLLSVSGLSSRTPVSGYS 104
           SAEEFIKIQTAYSTLSDPDKRADYDREICRAQL+SVSGLSSRTPVSGYS
Sbjct: 89  SAEEFIKIQTAYSTLSDPDKRADYDREICRAQLVSVSGLSSRTPVSGYS 137

[Close]

BLAST of CsaV3_2G015850.1 vs. ExPASy TrEMBL
Match: A0A6J1J932 (chaperone protein dnaJ 11, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111483702 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 7.2e-33
Identity = 81/107 (75.70%), Postives = 88/107 (82.24%), Query Frame = 0


Query: 3   TSSVLASTTGVRF------TRSSFYEVLGIPMTASSREIKAAYRKLARTCHPDVVAENSA 62
           TS++   TTG+RF        SSFYEVLGIP TASS EIKAAYRKLAR CHPDVVA+NS 
Sbjct: 30  TSTMTDRTTGLRFGVEMSIGHSSFYEVLGIPRTASSWEIKAAYRKLARICHPDVVAKNST 89

Query: 63  EEFIKIQTAYSTLSDPDKRADYDREICRAQLLSVSGLSSRTPVSGYS 104
           EEFIKIQ AYSTLSDP KRADYDREI RA+++SVSGLSS TPVSGYS
Sbjct: 90  EEFIKIQAAYSTLSDPVKRADYDREIYRARVISVSGLSSGTPVSGYS 136

[Close]

BLAST of CsaV3_2G015850.1 vs. TAIR 10
Match: AT4G36040.1 (Chaperone DnaJ-domain superfamily protein )

HSP 1 Score: 83.6 bits (205), Expect = 1.2e-16
Identity = 43/86 (50.00%), Postives = 60/86 (69.77%), Query Frame = 0


Query: 18  SSFYEVLGIPMTASSREIKAAYRKLARTCHPDV-----VAENSAEEFIKIQTAYSTLSDP 77
           +S Y+VL +P+ A+S++IK+AYR+LAR CHPDV      + +SA+EF+KI  AY TLSDP
Sbjct: 64  ASLYDVLEVPLGATSQDIKSAYRRLARICHPDVAGTDRTSSSSADEFMKIHAAYCTLSDP 123

Query: 78  DKRADYDREICRAQ---LLSVSGLSS 96
           +KR+ YDR + R      +  SGL S
Sbjct: 124 EKRSVYDRRMLRRSRPLTVGTSGLGS 149

[Close]

BLAST of CsaV3_2G015850.1 vs. TAIR 10
Match: AT2G17880.1 (Chaperone DnaJ-domain superfamily protein )

HSP 1 Score: 80.5 bits (197), Expect = 1.0e-15
Identity = 39/67 (58.21%), Postives = 52/67 (77.61%), Query Frame = 0


Query: 18  SSFYEVLGIPMTASSREIKAAYRKLARTCHPDVVA----ENSAEEFIKIQTAYSTLSDPD 77
           +S YE+L IP+ ++S+EIK+AYR+LAR CHPDV       +SA++F+KI  AY TLSDP+
Sbjct: 67  ASLYEILEIPVGSTSQEIKSAYRRLARICHPDVARNSRDNSSADDFMKIHAAYCTLSDPE 126

Query: 78  KRADYDR 81
           KRA YDR
Sbjct: 127 KRAVYDR 133

[Close]

BLAST of CsaV3_2G015850.1 vs. TAIR 10
Match: AT4G13830.1 (DNAJ-like 20 )

HSP 1 Score: 68.6 bits (166), Expect = 4.1e-12
Identity = 36/78 (46.15%), Postives = 49/78 (62.82%), Query Frame = 0


Query: 19  SFYEVLGIPMTASSREIKAAYRKLARTCHPDVVAENSAEE----FIKIQTAYSTLSDPDK 78
           SFY++LG+  + +  EIK AY++LAR  HPDV   +  EE    FI++Q AY TLSDP +
Sbjct: 66  SFYDLLGVTESVTLPEIKQAYKQLARKYHPDVSPPDRVEEYTDRFIRVQEAYETLSDPRR 125

Query: 79  RADYDREICRAQLLSVSG 93
           R  YDR++      S SG
Sbjct: 126 RVLYDRDLSMGFSFSFSG 143

[Close]

BLAST of CsaV3_2G015850.1 vs. TAIR 10
Match: AT4G13830.2 (DNAJ-like 20 )

HSP 1 Score: 68.6 bits (166), Expect = 4.1e-12
Identity = 36/78 (46.15%), Postives = 49/78 (62.82%), Query Frame = 0


Query: 19  SFYEVLGIPMTASSREIKAAYRKLARTCHPDVVAENSAEE----FIKIQTAYSTLSDPDK 78
           SFY++LG+  + +  EIK AY++LAR  HPDV   +  EE    FI++Q AY TLSDP +
Sbjct: 66  SFYDLLGVTESVTLPEIKQAYKQLARKYHPDVSPPDRVEEYTDRFIRVQEAYETLSDPRR 125

Query: 79  RADYDREICRAQLLSVSG 93
           R  YDR++      S SG
Sbjct: 126 RVLYDRDLSMGFSFSFSG 143

[Close]

BLAST of CsaV3_2G015850.1 vs. TAIR 10
Match: AT4G39960.1 (Molecular chaperone Hsp40/DnaJ family protein )

HSP 1 Score: 67.8 bits (164), Expect = 7.0e-12
Identity = 39/76 (51.32%), Postives = 49/76 (64.47%), Query Frame = 0


Query: 9   STTGVRFT---RSSFYEVLGIPMTASSREIKAAYRKLARTCHPDVVAENSAEE-FIKIQT 68
           S  G RFT    + FY VLG+   A+  EIK+AYRKLAR+ HPDV  +  AE+ F +I  
Sbjct: 72  SRRGARFTVRADTDFYSVLGVSKNATKAEIKSAYRKLARSYHPDVNKDAGAEDKFKEISN 131

Query: 69  AYSTLSDPDKRADYDR 81
           AY  LSD +KR+ YDR
Sbjct: 132 AYEILSDDEKRSLYDR 147

The following BLAST results are available for this feature:

BLAST of CsaV3_2G015850.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN61956.2	1.1e-59	100.00	hypothetical protein Csa_006153 [Cucumis sativus]	[more]
AVN99018.1	3.3e-48	100.00	hypothetical protein [Cucumis sativus]	[more]
XP_004147068.3	3.3e-48	100.00	chaperone protein dnaJ 11, chloroplastic [Cucumis sativus]	[more]
TYJ99564.1	2.7e-42	87.16	chaperone protein dnaJ 11 [Cucumis melo var. makuwa]	[more]
XP_008457665.1	2.7e-42	87.16	PREDICTED: chaperone protein dnaJ 11, chloroplastic-like [Cucumis melo] >KAA0045...	[more]

BLAST of CsaV3_2G015850.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FYB5	1.7e-15	50.00	Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATJ1...	[more]
Q5WHG0	5.2e-12	42.86	Chaperone protein DnaJ OS=Bacillus clausii (strain KSM-K16) OX=66692 GN=dnaJ PE=...	[more]
Q3AF07	1.5e-11	53.03	Chaperone protein DnaJ OS=Carboxydothermus hydrogenoformans (strain ATCC BAA-161...	[more]
Q67S53	1.5e-11	39.78	Chaperone protein DnaJ OS=Symbiobacterium thermophilum (strain T / IAM 14863) OX...	[more]
B5YAR4	2.0e-11	51.52	Chaperone protein DnaJ OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 396...	[more]

BLAST of CsaV3_2G015850.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJE1	1.6e-48	100.00	J domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G264570 PE=4 SV=1	[more]
A0A5A7TUA5	1.3e-42	87.16	Chaperone protein dnaJ 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A5D3BKM0	1.3e-42	87.16	Chaperone protein dnaJ 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3C7B4	1.3e-42	87.16	chaperone protein dnaJ 11, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A6J1J932	7.2e-33	75.70	chaperone protein dnaJ 11, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]

BLAST of CsaV3_2G015850.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36040.1	1.2e-16	50.00	Chaperone DnaJ-domain superfamily protein	[more]
AT2G17880.1	1.0e-15	58.21	Chaperone DnaJ-domain superfamily protein	[more]
AT4G13830.1	4.1e-12	46.15	DNAJ-like 20	[more]
AT4G13830.2	4.1e-12	46.15	DNAJ-like 20	[more]
AT4G39960.1	7.0e-12	51.32	Molecular chaperone Hsp40/DnaJ family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001623	DnaJ domain	PRINTS	PR00625	JDOMAIN	coord: 21..39 score: 51.53 coord: 54..74 score: 39.61
IPR001623	DnaJ domain	SMART	SM00271	dnaj_3	coord: 18..74 e-value: 2.8E-20 score: 83.4
IPR001623	DnaJ domain	PFAM	PF00226	DnaJ	coord: 20..79 e-value: 2.2E-22 score: 78.9
IPR001623	DnaJ domain	PROSITE	PS50076	DNAJ_2	coord: 19..82 score: 18.36426
IPR001623	DnaJ domain	CDD	cd06257	DnaJ	coord: 20..71 e-value: 4.83248E-20 score: 74.8893
IPR036869	Chaperone J-domain superfamily	GENE3D	1.10.287.110	DnaJ domain	coord: 6..91 e-value: 3.1E-24 score: 87.2
IPR036869	Chaperone J-domain superfamily	SUPERFAMILY	46565	Chaperone J-domain	coord: 16..83
None	No IPR available	PANTHER	PTHR44240	DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED	coord: 14..90
None	No IPR available	PANTHER	PTHR44240:SF23	DNAJ PROTEIN HOMOLOG-LIKE	coord: 14..90
IPR018253	DnaJ domain, conserved site	PROSITE	PS00636	DNAJ_1	coord: 59..78

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_2G015850	CsaV3_2G015850	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_2G015850.1.exon1	CsaV3_2G015850.1.exon1	exon
CsaV3_2G015850.1.exon2	CsaV3_2G015850.1.exon2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_2G015850.1.cds1	CsaV3_2G015850.1.cds1	CDS
CsaV3_2G015850.1.cds2	CsaV3_2G015850.1.cds2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_2G015850.1	CsaV3_2G015850.1-protein	polypeptide