Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAATGACAATCTGAACCTACGAAATAATCTGTCTGATTTTATTTCTGACGATGAGAATGAAGAGTTTGGATGCCTTAGTACAATGATAAGTGATGCTAACTTCAATGGGCTCCATGAAGAATACAGTGCAACTGCTGGATTCCATCATTCCCAACTTCCAGATCCACAAGTCTCCTCTCATCCAAATTTTGCTGGTTCCTTTCCTGATTCAATTTCATATACTGATATTGATTGGTCATTTGATAGATCCCGCTTGGGTCTAAGCTCTCAAAATTGGTCTAACAGCATTTTCACGAATACCAAAAATAAGACAAATGCTTCATTTCATGTCAGAAGTCCAGAACTTGCCAGCATTTGTAGAGTCCCAGTGAGAAGTCAGGAAGCTGAAGGCCGACATTTGATTGGGTATGATAGAGAAACAAACAATCATAATCTGCAATCCTCAGAATGTGAGGATCAAATTGATCTTAACATTACTGCCATTTGCAGTGGATTCCAACCCCATTGTTTACAAGAACTTGATGCTGAGACTTTTGATGTTGGATGTCATACAAATACCACCACGGCTCTCAACAAGGCAGATAAGATCTCAGGCTTTAAAGACAATTTAGAGGATATTCCTAACCTTACAACCTTTCCTCAGAACCCTGTTGGAGTAAGATGTAGTAATTTTATTAACTTTAGTTTGAACCCATCATCCGTCTTTCAACCATCTATTATAGTTGGTGGGGATAACCCTTTTCCCACTCCAAGTAATGAAGATTGTTTGAGTCCTGATGTATTCCAGGGCAATGAGGATATCCTCAACTCACTTATAAATGCTGCTCCCTCTACTACAGAATCTATCAAAAGCCAAATTGGGATATCCTCACAAAGCTGGTTTACTGACTTAGAATCTTGCTTACTTAGAAGGAATCAAAATCACTGGCCTTCTGAAGAGAAATCTCATACTGATGCCAGGAACTTCTCATCTGAATATCCAACAAATGCTCCTTCTCTTGGGATATCTGCAACCATCTCTGTTCCAGATCAGTCGTGTAAGAGAGATTGA
mRNA sequence
ATGGAAAATGACAATCTGAACCTACGAAATAATCTGTCTGATTTTATTTCTGACGATGAGAATGAAGAGTTTGGATGCCTTAGTACAATGATAAGTGATGCTAACTTCAATGGGCTCCATGAAGAATACAGTGCAACTGCTGGATTCCATCATTCCCAACTTCCAGATCCACAAGTCTCCTCTCATCCAAATTTTGCTGGTTCCTTTCCTGATTCAATTTCATATACTGATATTGATTGGTCATTTGATAGATCCCGCTTGGGTCTAAGCTCTCAAAATTGGTCTAACAGCATTTTCACGAATACCAAAAATAAGACAAATGCTTCATTTCATGTCAGAAGTCCAGAACTTGCCAGCATTTGTAGAGTCCCAGTGAGAAGTCAGGAAGCTGAAGGCCGACATTTGATTGGGTATGATAGAGAAACAAACAATCATAATCTGCAATCCTCAGAATGTGAGGATCAAATTGATCTTAACATTACTGCCATTTGCAGTGGATTCCAACCCCATTGTTTACAAGAACTTGATGCTGAGACTTTTGATGTTGGATGTCATACAAATACCACCACGGCTCTCAACAAGGCAGATAAGATCTCAGGCTTTAAAGACAATTTAGAGGATATTCCTAACCTTACAACCTTTCCTCAGAACCCTGTTGGAGTAAGATGTAGTAATTTTATTAACTTTAGTTTGAACCCATCATCCGTCTTTCAACCATCTATTATAGTTGGTGGGGATAACCCTTTTCCCACTCCAAGTAATGAAGATTGTTTGAGTCCTGATGTATTCCAGGGCAATGAGGATATCCTCAACTCACTTATAAATGCTGCTCCCTCTACTACAGAATCTATCAAAAGCCAAATTGGGATATCCTCACAAAGCTGGTTTACTGACTTAGAATCTTGCTTACTTAGAAGGAATCAAAATCACTGGCCTTCTGAAGAGAAATCTCATACTGATGCCAGGAACTTCTCATCTGAATATCCAACAAATGCTCCTTCTCTTGGGATATCTGCAACCATCTCTGTTCCAGATCAGTCGTGTAAGAGAGATTGA
Coding sequence (CDS)
ATGGAAAATGACAATCTGAACCTACGAAATAATCTGTCTGATTTTATTTCTGACGATGAGAATGAAGAGTTTGGATGCCTTAGTACAATGATAAGTGATGCTAACTTCAATGGGCTCCATGAAGAATACAGTGCAACTGCTGGATTCCATCATTCCCAACTTCCAGATCCACAAGTCTCCTCTCATCCAAATTTTGCTGGTTCCTTTCCTGATTCAATTTCATATACTGATATTGATTGGTCATTTGATAGATCCCGCTTGGGTCTAAGCTCTCAAAATTGGTCTAACAGCATTTTCACGAATACCAAAAATAAGACAAATGCTTCATTTCATGTCAGAAGTCCAGAACTTGCCAGCATTTGTAGAGTCCCAGTGAGAAGTCAGGAAGCTGAAGGCCGACATTTGATTGGGTATGATAGAGAAACAAACAATCATAATCTGCAATCCTCAGAATGTGAGGATCAAATTGATCTTAACATTACTGCCATTTGCAGTGGATTCCAACCCCATTGTTTACAAGAACTTGATGCTGAGACTTTTGATGTTGGATGTCATACAAATACCACCACGGCTCTCAACAAGGCAGATAAGATCTCAGGCTTTAAAGACAATTTAGAGGATATTCCTAACCTTACAACCTTTCCTCAGAACCCTGTTGGAGTAAGATGTAGTAATTTTATTAACTTTAGTTTGAACCCATCATCCGTCTTTCAACCATCTATTATAGTTGGTGGGGATAACCCTTTTCCCACTCCAAGTAATGAAGATTGTTTGAGTCCTGATGTATTCCAGGGCAATGAGGATATCCTCAACTCACTTATAAATGCTGCTCCCTCTACTACAGAATCTATCAAAAGCCAAATTGGGATATCCTCACAAAGCTGGTTTACTGACTTAGAATCTTGCTTACTTAGAAGGAATCAAAATCACTGGCCTTCTGAAGAGAAATCTCATACTGATGCCAGGAACTTCTCATCTGAATATCCAACAAATGCTCCTTCTCTTGGGATATCTGCAACCATCTCTGTTCCAGATCAGTCGTGTAAGAGAGATTGA
Protein sequence
MENDNLNLRNNLSDFISDDENEEFGCLSTMISDANFNGLHEEYSATAGFHHSQLPDPQVSSHPNFAGSFPDSISYTDIDWSFDRSRLGLSSQNWSNSIFTNTKNKTNASFHVRSPELASICRVPVRSQEAEGRHLIGYDRETNNHNLQSSECEDQIDLNITAICSGFQPHCLQELDAETFDVGCHTNTTTALNKADKISGFKDNLEDIPNLTTFPQNPVGVRCSNFINFSLNPSSVFQPSIIVGGDNPFPTPSNEDCLSPDVFQGNEDILNSLINAAPSTTESIKSQIGISSQSWFTDLESCLLRRNQNHWPSEEKSHTDARNFSSEYPTNAPSLGISATISVPDQSCKRD
Homology
BLAST of Bhi09G000452 vs. ExPASy TrEMBL
Match:
A0A0A0K9Y2 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G430810 PE=4 SV=1)
HSP 1 Score: 545.8 bits (1405), Expect = 1.3e-151
Identity = 278/351 (79.20%), Postives = 298/351 (84.90%), Query Frame = 0
Query: 1 MENDNLNLRNNLSDFISDDENEEFGCLSTMISDANFNGLHEEYSATAGFHHSQLPDPQVS 60
MENDNL LRNNLSDFISDDENEE GCL T+ SD NFN LHEEYS AGFHHSQ DP VS
Sbjct: 1 MENDNLKLRNNLSDFISDDENEELGCLDTIRSDVNFNRLHEEYSTAAGFHHSQFSDPPVS 60
Query: 61 SHPNFAGSFPDSISYTDIDWSFDRSRLGLSSQNWSNSIFTNTKNKTNASFHVRSPELASI 120
S P FAGSF D+ISYTDIDWSFD SRLGLSSQNWS ++FTN +NKTN SFHVR+PEL+SI
Sbjct: 61 SRPKFAGSFSDTISYTDIDWSFDSSRLGLSSQNWSRNMFTNPENKTNTSFHVRNPELSSI 120
Query: 121 CRVPVRSQEAEGRHLIGYDRETNNHNLQSSECEDQIDLNITAICSGFQPHCLQELDAETF 180
CR PVRSQEAEG LIG D ETNNHNL SS+CEDQIDLNI AICSGFQ HCLQE DAE+F
Sbjct: 121 CRFPVRSQEAEGLDLIGCDTETNNHNLLSSKCEDQIDLNIAAICSGFQTHCLQEHDAESF 180
Query: 181 DVGCHTNTTTALNKADKISGFKDNLEDIPNLTTFPQNPVGVRCSNFINFSLNPSSVFQPS 240
+VG HTN TTALN+ DKISG+KDN +IPNLTTFPQN VGVRCSNFINFSL+PSSVFQPS
Sbjct: 181 NVGYHTNPTTALNRTDKISGYKDNSGNIPNLTTFPQNSVGVRCSNFINFSLHPSSVFQPS 240
Query: 241 IIVGGDNPFPTPSNEDCLSPDVFQGNEDILNSLINAAPSTTESIKSQIGISSQSWFTDLE 300
IIVGGDNPFP PSNED LS DV Q NEDIL SL NAAPSTTESI SQIGISS+SWFTDLE
Sbjct: 241 IIVGGDNPFPRPSNEDDLSADVVQCNEDILKSLRNAAPSTTESINSQIGISSRSWFTDLE 300
Query: 301 SCLLRRNQNHWPSEEKSHTDARNFSSEYPTNAPSLGISATISVPDQSCKRD 352
SCL R++Q+ P EE TD RNFSSE+PT APSLGIS TISVPDQS + D
Sbjct: 301 SCLHRKDQSQQPIEE---TDVRNFSSEFPTYAPSLGISTTISVPDQSVEHD 348
BLAST of Bhi09G000452 vs. ExPASy TrEMBL
Match:
A0A5D3CG54 (RING-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001450 PE=4 SV=1)
HSP 1 Score: 542.7 bits (1397), Expect = 1.1e-150
Identity = 274/351 (78.06%), Postives = 300/351 (85.47%), Query Frame = 0
Query: 1 MENDNLNLRNNLSDFISDDENEEFGCLSTMISDANFNGLHEEYSATAGFHHSQLPDPQVS 60
MENDNL LRN+LSDFISDDENEEFGCL T+ SD NFNGLHEEYS AGFHHSQ DP VS
Sbjct: 4 MENDNLKLRNSLSDFISDDENEEFGCLDTIRSDVNFNGLHEEYSTAAGFHHSQFSDPPVS 63
Query: 61 SHPNFAGSFPDSISYTDIDWSFDRSRLGLSSQNWSNSIFTNTKNKTNASFHVRSPELASI 120
SHP FAGSF D+ISYTDIDWSFD SRLGLSSQNWS+S+FTN +NKTN SFHVR+PEL+SI
Sbjct: 64 SHPKFAGSFSDTISYTDIDWSFDSSRLGLSSQNWSHSMFTNPENKTNTSFHVRNPELSSI 123
Query: 121 CRVPVRSQEAEGRHLIGYDRETNNHNLQSSECEDQIDLNITAICSGFQPHCLQELDAETF 180
CR P+RSQEAEG LIG DR+ NNHNLQSS+CEDQIDLNI AICSGFQ HCLQE DAETF
Sbjct: 124 CRFPLRSQEAEGLDLIGCDRDANNHNLQSSKCEDQIDLNIAAICSGFQTHCLQEHDAETF 183
Query: 181 DVGCHTNTTTALNKADKISGFKDNLEDIPNLTTFPQNPVGVRCSNFINFSLNPSSVFQPS 240
+VG HTN TT+LN+ DKISG+KDN +IPNLTTFPQN VG+RCSN INFSL+PSS FQ S
Sbjct: 184 NVGYHTNPTTSLNRTDKISGYKDNSGNIPNLTTFPQNSVGLRCSNLINFSLHPSSAFQQS 243
Query: 241 IIVGGDNPFPTPSNEDCLSPDVFQGNEDILNSLINAAPSTTESIKSQIGISSQSWFTDLE 300
IIVGGDNPFP PSN+D S DV + NEDIL SL +AAPSTTESI SQIGISS+SWFTDLE
Sbjct: 244 IIVGGDNPFPRPSNDDGWSADVMKCNEDILKSLRSAAPSTTESINSQIGISSRSWFTDLE 303
Query: 301 SCLLRRNQNHWPSEEKSHTDARNFSSEYPTNAPSLGISATISVPDQSCKRD 352
SCL RR+Q+ P EE TD RNFSSE+PT APSLGISATISVPDQS + D
Sbjct: 304 SCLHRRDQSQQPIEE---TDVRNFSSEFPTYAPSLGISATISVPDQSFEHD 351
BLAST of Bhi09G000452 vs. ExPASy TrEMBL
Match:
A0A5A7UYU1 (RING-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G001590 PE=4 SV=1)
HSP 1 Score: 542.7 bits (1397), Expect = 1.1e-150
Identity = 274/351 (78.06%), Postives = 300/351 (85.47%), Query Frame = 0
Query: 1 MENDNLNLRNNLSDFISDDENEEFGCLSTMISDANFNGLHEEYSATAGFHHSQLPDPQVS 60
MENDNL LRN+LSDFISDDENEEFGCL T+ SD NFNGLHEEYS AGFHHSQ DP VS
Sbjct: 4 MENDNLKLRNSLSDFISDDENEEFGCLDTIRSDVNFNGLHEEYSTAAGFHHSQFSDPPVS 63
Query: 61 SHPNFAGSFPDSISYTDIDWSFDRSRLGLSSQNWSNSIFTNTKNKTNASFHVRSPELASI 120
SHP FAGSF D+ISYTDIDWSFD SRLGLSSQNWS+S+FTN +NKTN SFHVR+PEL+SI
Sbjct: 64 SHPKFAGSFSDTISYTDIDWSFDSSRLGLSSQNWSHSMFTNPENKTNTSFHVRNPELSSI 123
Query: 121 CRVPVRSQEAEGRHLIGYDRETNNHNLQSSECEDQIDLNITAICSGFQPHCLQELDAETF 180
CR P+RSQEAEG LIG DR+ NNHNLQSS+CEDQIDLNI AICSGFQ HCLQE DAETF
Sbjct: 124 CRFPLRSQEAEGLDLIGCDRDANNHNLQSSKCEDQIDLNIAAICSGFQTHCLQEHDAETF 183
Query: 181 DVGCHTNTTTALNKADKISGFKDNLEDIPNLTTFPQNPVGVRCSNFINFSLNPSSVFQPS 240
+VG HTN TT+LN+ DKISG+KDN +IPNLTTFPQN VG+RCSN INFSL+PSS FQ S
Sbjct: 184 NVGYHTNPTTSLNRTDKISGYKDNSGNIPNLTTFPQNSVGLRCSNLINFSLHPSSAFQQS 243
Query: 241 IIVGGDNPFPTPSNEDCLSPDVFQGNEDILNSLINAAPSTTESIKSQIGISSQSWFTDLE 300
IIVGGDNPFP PSN+D S DV + NEDIL SL +AAPSTTESI SQIGISS+SWFTDLE
Sbjct: 244 IIVGGDNPFPRPSNDDGWSADVMKCNEDILKSLRSAAPSTTESINSQIGISSRSWFTDLE 303
Query: 301 SCLLRRNQNHWPSEEKSHTDARNFSSEYPTNAPSLGISATISVPDQSCKRD 352
SCL RR+Q+ P EE TD RNFSSE+PT APSLGISATISVPDQS + D
Sbjct: 304 SCLHRRDQSQQPIEE---TDVRNFSSEFPTYAPSLGISATISVPDQSFEHD 351
BLAST of Bhi09G000452 vs. ExPASy TrEMBL
Match:
A0A1S3CE69 (uncharacterized protein LOC103499862 OS=Cucumis melo OX=3656 GN=LOC103499862 PE=4 SV=1)
HSP 1 Score: 538.5 bits (1386), Expect = 2.1e-149
Identity = 273/351 (77.78%), Postives = 298/351 (84.90%), Query Frame = 0
Query: 1 MENDNLNLRNNLSDFISDDENEEFGCLSTMISDANFNGLHEEYSATAGFHHSQLPDPQVS 60
MENDNL LRN+LSDFISDDENEEFGCL T+ SD NFNGLHEEYS AGFHHSQ DP VS
Sbjct: 4 MENDNLKLRNSLSDFISDDENEEFGCLDTIRSDVNFNGLHEEYSTAAGFHHSQFSDPPVS 63
Query: 61 SHPNFAGSFPDSISYTDIDWSFDRSRLGLSSQNWSNSIFTNTKNKTNASFHVRSPELASI 120
SHP FAGSF D+ISYTDIDWSFD SRLGLSSQNWS+S+FTN +NKTN SFHVR+PEL+SI
Sbjct: 64 SHPKFAGSFSDTISYTDIDWSFDSSRLGLSSQNWSHSMFTNPENKTNTSFHVRNPELSSI 123
Query: 121 CRVPVRSQEAEGRHLIGYDRETNNHNLQSSECEDQIDLNITAICSGFQPHCLQELDAETF 180
CR PVRSQEAEG LIG DR+ NNHNLQSS+CEDQIDLNI AICSGFQ HCLQE DAETF
Sbjct: 124 CRFPVRSQEAEGLDLIGCDRDANNHNLQSSKCEDQIDLNIAAICSGFQTHCLQEHDAETF 183
Query: 181 DVGCHTNTTTALNKADKISGFKDNLEDIPNLTTFPQNPVGVRCSNFINFSLNPSSVFQPS 240
+VG HTN TT+LN+ DKISG+KDN +IPNLTTFPQN VG+RCSN INFSL+PSS FQ S
Sbjct: 184 NVGYHTNPTTSLNRTDKISGYKDNSGNIPNLTTFPQNSVGLRCSNLINFSLHPSSAFQQS 243
Query: 241 IIVGGDNPFPTPSNEDCLSPDVFQGNEDILNSLINAAPSTTESIKSQIGISSQSWFTDLE 300
IIVGGDNPFP PSN+D S DV + NEDIL SL +AAPSTTESI SQIGISS+SWFTDLE
Sbjct: 244 IIVGGDNPFPRPSNDDGWSADVMKCNEDILKSLRSAAPSTTESINSQIGISSRSWFTDLE 303
Query: 301 SCLLRRNQNHWPSEEKSHTDARNFSSEYPTNAPSLGISATISVPDQSCKRD 352
SCL R+Q+ P E TD RNFSSE+PT APSLGISATISVPDQS + D
Sbjct: 304 SCLHIRDQSQQPIE----TDVRNFSSEFPTYAPSLGISATISVPDQSFEHD 350
BLAST of Bhi09G000452 vs. ExPASy TrEMBL
Match:
A0A6J1JN28 (uncharacterized protein LOC111488380 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488380 PE=4 SV=1)
HSP 1 Score: 528.1 bits (1359), Expect = 2.8e-146
Identity = 271/349 (77.65%), Postives = 291/349 (83.38%), Query Frame = 0
Query: 1 MENDNLNLRNNLSDFISDDENEEFGCLSTMISDANFNGLHEEYSATAGFHHSQLPDPQVS 60
ME DNLNLRN LS FISDDENEE CL T+ SDANFNGLHEEYSA +G HHSQ PDP VS
Sbjct: 7 MEKDNLNLRNKLSGFISDDENEESRCLGTIRSDANFNGLHEEYSAASGLHHSQFPDPSVS 66
Query: 61 SHPNFAGSFPDSISYTDIDWSFDRSRLGLSSQNWSNSIFTNTKNKTNASFHVRSPELASI 120
SHPN AGSF DSISYTDIDWSFD SRLGLSSQ WSNSI+ N KNKTNASF +RSPELASI
Sbjct: 67 SHPNLAGSFSDSISYTDIDWSFDGSRLGLSSQKWSNSIYANPKNKTNASFRIRSPELASI 126
Query: 121 CRVPVRSQEAEGRHLIGYDRETNNHNLQSSECEDQIDLNITAICSGFQPHCLQELDAETF 180
CRVP RS EAEG H R TNNHN S+ECEDQIDLNITAICS QPH L+ELDAE
Sbjct: 127 CRVPARSHEAEGIH-----RVTNNHNFHSAECEDQIDLNITAICSALQPHGLEELDAEAL 186
Query: 181 DVGCHTNTTTALNKADKISGFKDNLEDIPNLTTFPQNPVGVRCSNFINFSLNPSSVFQPS 240
DVGC T TTALNKADKISGFKDN DIPNLTTFPQN VG+RCSNFINFSL+ SSVFQPS
Sbjct: 187 DVGCQTKATTALNKADKISGFKDNSGDIPNLTTFPQNSVGLRCSNFINFSLHQSSVFQPS 246
Query: 241 IIVGGDNPFPTPS--NEDCLSPDVFQGNEDILNSLINAAPSTTESIKSQIGISSQSWFTD 300
IIVGGDNPFPTPS ++ L+P V QG+EDILNSL NA P TTES+ S+I +SSQ WFTD
Sbjct: 247 IIVGGDNPFPTPSFTDDSGLTPAVVQGDEDILNSLKNAPPLTTESVNSKIELSSQCWFTD 306
Query: 301 LESCLLRRNQNHWPSEEKSHTDARNFSSEYPTNAPSLGISATISVPDQS 348
LESCLLRR+Q+ PSE+KSH D RNF+SE+PT APSLGISATISVPDQS
Sbjct: 307 LESCLLRRDQSQRPSEQKSHPDVRNFTSEFPTFAPSLGISATISVPDQS 350
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0K9Y2 | 1.3e-151 | 79.20 | RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G430810 P... | [more] |
A0A5D3CG54 | 1.1e-150 | 78.06 | RING-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5... | [more] |
A0A5A7UYU1 | 1.1e-150 | 78.06 | RING-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6... | [more] |
A0A1S3CE69 | 2.1e-149 | 77.78 | uncharacterized protein LOC103499862 OS=Cucumis melo OX=3656 GN=LOC103499862 PE=... | [more] |
A0A6J1JN28 | 2.8e-146 | 77.65 | uncharacterized protein LOC111488380 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... | [more] |