Chy10G173400 (gene) Cucumber (hystrix) v1

Overview


Name	Chy10G173400
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Nudix hydrolase
Location	chrH10: 3890609 .. 3892843 (-)
RNA-Seq Expression	Chy10G173400
Synteny	Chy10G173400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCTCTTCCTTCTGGTTACCGCCCCAACGTTGGCGTTTGTCTCATCAACTCTGACTATCAGGTTCTTCCTTTCTTCCAAACTTCAGTAGTGTTTTTGGTCAGATGGGTCTTCTTCTTCTTTTCTTTTCTTTTATGATCTTGAAGAATTATTGCTCAATTGATTCCCCATTTCTTTGTTAGATCTATATTCATGGGTCAATTTTGTTCTTTTTTGCTGGATTTTTGCTTTTTTCTTTTTTAATTAAATGTAAAATGTTCCAATTGTGAGAGTAGAGCTATGTTGATGTAGAGGATTTGAAGGTGTTTTGGAGTTCTTTTTGTTGATGTTGGGAATTATGTTGATGAGAAAATGATTATAATCTAATTAGATTTGTTATACGCCAGGTTTTTGTGGCTTCTAGATTGAATGTTCCAGGAGCATGGCAGATGCCTCAGGTGATTTTGAAATTTCCTCTGTTCTTTGTCTCTCCTCCATTTTGGAATTTTGTTTCAGAATCTCTAAATGAGTAAGTTTATTTCATGGGAAGATGTTGTTGGTCTGTTTTATTGGATCAAATTCTGTTCAATTATATGAATTTTGGAGATTGGTTTGTTGTGAACTTGTGGGCTGTAATGGTTTATCTGCCCTTTTGATTTGATGGATCAAATGTTAACTGTTTGAGTCGGAATGGCTGTGAGTTGGCTCATGATCGCACAGGGAAGCTATAAACCTTTATAACTTTCATGTCATAGCTGATTTGGGATGTACTGTTAAAATAGACTGAAAAGTTTCGAATCAGTATCACGAATAGATCCAAGGACTGTTATATTGGTTTTGGTTCTATAGAACAGTGGTTGCATTGAGTGTTATGTATCCCGCTATATGCTCTGGCCTCTCATTATTGATTCTAAAATTTTTGAATTCTCAAAGATGGAATTTGCATCAATGACTTTATGAAGTTCCAAAATTACCTATCATTCATTAGCTAAATCCTTTGATAAAAAAACAAAATTTGCTTTCTTTGCTAGAATTCTTTTAGTAAGCGAACATCCATGAGGTCTTTGAATCTTCGGTGAGATTGAATTGGCTGTTTTGTTCAATAATTCATTTGTCTTAGGGAGGGATTGAAGATGGGGAAGACCCAAAGTTGGCAGCTGTTAGGGAACTGAGAAAGGAAACTGGAATAGTGTCTGCTGAGATGGTTGCCGAGGTACTACTATATTTGGTGATTTGTTTCGGTGCCTTCTTTCACGAAGAATTACTAAACCAACTATTTCTCTACAGCATTTTTGAGGTTAACTTGACGATGGTACTCAAATAAATTCAAGAATTTGCATTGTTTTCGTTTAACAGGTACCCAAATGGTTGACTTACGACTTTCCTCCTGCTGTGAAGACCAAAGTCAATCGTCTCTGGGGTGGGCAATGGCATGGGCAGGCACAAAAATGGTCCGTCTTTCTGTCTTTTTTCATTATAGTTGAAACTGAAACTAGACAAGGATTGACGATAAGAAATGAGGCTTATATGCATTTTGTAACTTTTGACAGGTTTCTTATGAGATTGACAAAAGACGACAGTGAGATTAACTTGGACAACGATGAAGCCGACGTTGAATTTGCAGAGTGGAAATGGGCAAACCCCGAAGAAGTTGTTGAACAGGTCTTTTTGGCACTCATTTCATAACGATTTCTAGATATGGTTTTTCTCTAGAAACTTGTACGCAACATTTTAGTCTTAGAAGTTGAATCTATTTGGTAACTATTTTTTTAAAAGAAAATTAAGCCTAAAAGCGTCCGTGGAAGGGTATTTCTTAGGCTTAATTTATATATATATATATAGTTAGCAAATGGAGTCAACTTTTGTGAAATTGAGTTTTTAGGACAAATTTTTTAAACTAAAAAAAAGTATATTTAACTTCTTTTAATTTTTGGAATCTAAGTAAGAGTTCAACTTTTTGTACTTTAGAAATATTTTAAGAAATTTTAAGAAATTGAGAGGAAATAGGTTTAATTTTAAAAAATCAGGAAGATAAAAATCAAGATTTTAGAATATACAAAGCTAGAATGTGGAGAGTGATGACAATTTAAACTTAGATACAAATATAGTAATATGTAATTGAAGTTTTATTTTTATTTTTATTTTCAGGCTGTGGATTACAAGAGACCAACTTATGAGGAGGTAATGAAGACTTTTGCACCCTACCTTAATGGAAACAAAATATCAACCAAATGTAAATCATCCAAATGGTGA

mRNA sequence

ATGGATTCTCTTCCTTCTGGTTACCGCCCCAACGTTGGCGTTTGTCTCATCAACTCTGACTATCAGGTTTTTGTGGCTTCTAGATTGAATGTTCCAGGAGCATGGCAGATGCCTCAGGGAGGGATTGAAGATGGGGAAGACCCAAAGTTGGCAGCTGTTAGGGAACTGAGAAAGGAAACTGGAATAGTGTCTGCTGAGATGGTTGCCGAGGTACCCAAATGGTTGACTTACGACTTTCCTCCTGCTGTGAAGACCAAAGTCAATCGTCTCTGGGGTGGGCAATGGCATGGGCAGGCACAAAAATGGTTTCTTATGAGATTGACAAAAGACGACAGTGAGATTAACTTGGACAACGATGAAGCCGACGTTGAATTTGCAGAGTGGAAATGGGCAAACCCCGAAGAAGTTGTTGAACAGGCTGTGGATTACAAGAGACCAACTTATGAGGAGGTAATGAAGACTTTTGCACCCTACCTTAATGGAAACAAAATATCAACCAAATGTAAATCATCCAAATGGTGA

Coding sequence (CDS)

ATGGATTCTCTTCCTTCTGGTTACCGCCCCAACGTTGGCGTTTGTCTCATCAACTCTGACTATCAGGTTTTTGTGGCTTCTAGATTGAATGTTCCAGGAGCATGGCAGATGCCTCAGGGAGGGATTGAAGATGGGGAAGACCCAAAGTTGGCAGCTGTTAGGGAACTGAGAAAGGAAACTGGAATAGTGTCTGCTGAGATGGTTGCCGAGGTACCCAAATGGTTGACTTACGACTTTCCTCCTGCTGTGAAGACCAAAGTCAATCGTCTCTGGGGTGGGCAATGGCATGGGCAGGCACAAAAATGGTTTCTTATGAGATTGACAAAAGACGACAGTGAGATTAACTTGGACAACGATGAAGCCGACGTTGAATTTGCAGAGTGGAAATGGGCAAACCCCGAAGAAGTTGTTGAACAGGCTGTGGATTACAAGAGACCAACTTATGAGGAGGTAATGAAGACTTTTGCACCCTACCTTAATGGAAACAAAATATCAACCAAATGTAAATCATCCAAATGGTGA

Protein sequence

MDSLPSGYRPNVGVCLINSDYQVFVASRLNVPGAWQMPQGGIEDGEDPKLAAVRELRKETGIVSAEMVAEVPKWLTYDFPPAVKTKVNRLWGGQWHGQAQKWFLMRLTKDDSEINLDNDEADVEFAEWKWANPEEVVEQAVDYKRPTYEEVMKTFAPYLNGNKISTKCKSSKW*

Homology

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BLAST of Chy10G173400 vs. ExPASy Swiss-Prot
Match: Q9C6Z2 (Nudix hydrolase 25 OS=Arabidopsis thaliana OX=3702 GN=NUDT25 PE=1 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 1.4e-79
Identity = 137/175 (78.29%), Postives = 155/175 (88.57%), Query Frame = 0


Query: 1   MDSLPSGYRPNVGVCLINSDYQVFVASRLNVPGAWQMPQGGIEDGEDPKLAAVRELRKET 60
           M++LP GYRPNVGVCLINSD  VFVASRLNVPGAWQMPQGGIEDGEDPK AA+REL++ET
Sbjct: 1   MENLPPGYRPNVGVCLINSDNLVFVASRLNVPGAWQMPQGGIEDGEDPKSAAMRELQEET 60

Query: 61  GIVSAEMVAEVPKWLTYDFPPAVKTKVNRLWGGQWHGQAQKWFLMRL--TKDDSEINLDN 120
           G+VSAE+V+EVP WLTYDFPPAVK KVNRLWGG+WHGQAQKW+L+RL   +D+ EINL N
Sbjct: 61  GVVSAEIVSEVPNWLTYDFPPAVKAKVNRLWGGEWHGQAQKWYLVRLRNDEDEKEINLAN 120

Query: 121 DEADVEFAEWKWANPEEVVEQAVDYKRPTYEEVMKTFAPYLNGNKISTKCKSSKW 174
           +EAD EFAEWKWA PEEVVEQAVDYKRPTYEEV+KTF  +LN    + KCKS+KW
Sbjct: 121 NEADSEFAEWKWAKPEEVVEQAVDYKRPTYEEVIKTFGSFLNDTGRAAKCKSAKW 175

[Close]

BLAST of Chy10G173400 vs. ExPASy Swiss-Prot
Match: Q9CAF2 (Nudix hydrolase 26, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NUDT26 PE=1 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.6e-54
Identity = 93/160 (58.13%), Postives = 123/160 (76.88%), Query Frame = 0


Query: 1   MDSLPSGYRPNVGVCLINSDYQVFVASRLNVPGAWQMPQGGIEDGEDPKLAAVRELRKET 60
           M+S P GYR NVGVCL+NS  ++F ASRL++P AWQMPQGGI++GEDP++A +REL++ET
Sbjct: 56  MESPPEGYRRNVGVCLMNSSKKIFTASRLDIPSAWQMPQGGIDEGEDPRVAVMRELKEET 115

Query: 61  GIVSAEMVAEVPKWLTYDFPPAVKTKVNRLWGGQWHGQAQKWFLMRLTKDDSEINLDNDE 120
           G+ SAE++AE P W+TYDFPP V+ K+   WG  W GQAQKWFL++ T  D EINL  D 
Sbjct: 116 GVHSAEILAEAPHWITYDFPPDVREKLKVRWGSDWKGQAQKWFLLKFTGKDEEINLLGDG 175

Query: 121 AD-VEFAEWKWANPEEVVEQAVDYKRPTYEEVMKTFAPYL 160
            +  EF EW W +P++VVE AV++K+P Y+EVM  FA +L
Sbjct: 176 TEKPEFGEWSWTSPDQVVENAVEFKKPVYKEVMSAFASHL 215

[Close]

BLAST of Chy10G173400 vs. ExPASy Swiss-Prot
Match: Q9FNH4 (Nudix hydrolase 27, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NUDT27 PE=1 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 6.4e-48
Identity = 87/159 (54.72%), Postives = 113/159 (71.07%), Query Frame = 0


Query: 1   MDSLPSGYRPNVGVCLINSDYQVFVASRLNVPGAWQMPQGGIEDGEDPKLAAVRELRKET 60
           ++S P GYR NVG+CL++   ++F AS++++P  WQMPQGG ++GED + AA RELR+ET
Sbjct: 55  VESPPVGYRKNVGICLVSPCRKIFTASKIHIPDTWQMPQGGADEGEDLRNAAFRELREET 114

Query: 61  GIVSAEMVAEVPKWLTYDFPPAVKTKVNRLWGGQWHGQAQKWFLMRLTKDDSEINLDND- 120
           G+ SAE +AE+P WLTYDFP  VK K+NR W   + GQAQKWFL + T  + EINL  D 
Sbjct: 115 GVTSAEFIAEIPNWLTYDFPREVKDKLNRKWRTSYKGQAQKWFLFKFTGKEEEINLLGDG 174

Query: 121 EADVEFAEWKWANPEEVVEQAVDYKRPTYEEVMKTFAPY 159
            A  EF  W W  PE+V+E AV +KRP YE V+K F PY
Sbjct: 175 TAKPEFKVWSWMLPEQVIEHAVYFKRPVYEHVIKQFNPY 213

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BLAST of Chy10G173400 vs. ExPASy Swiss-Prot
Match: Q3IZC1 (RNA pyrophosphohydrolase OS=Rhodobacter sphaeroides (strain ATCC 17023 / DSM 158 / JCM 6121 / NBRC 12203 / NCIMB 8253 / ATH 2.4.1.) OX=272943 GN=rppH PE=3 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 3.9e-37
Identity = 78/162 (48.15%), Postives = 105/162 (64.81%), Query Frame = 0


Query: 1   MDSLPSGYRPNVGVCLINSDYQVFVASRLNVP-GAWQMPQGGIEDGEDPKLAAVRELRKE 60
           +D L   YRP VG+ LIN +  +F   R++ P  AWQMPQGGI++GE P+ AA+REL +E
Sbjct: 5   IDPLTLPYRPCVGIVLINREGLIFAGQRIDSPVPAWQMPQGGIDEGEKPREAALRELWEE 64

Query: 61  TGIVS--AEMVAEVPKWLTYDFPPAVKTKVNRLWGGQWHGQAQKWFLMRLTKDDSEINLD 120
           TGI +   E VA+ P W+TYD PP +   + R+WGG++ GQ QKWFL R    D E+ + 
Sbjct: 65  TGIPAERVEFVAKAPDWVTYDLPPEL---LGRVWGGKYRGQRQKWFLYRYLGTDEEVGIG 124

Query: 121 NDEADVEFAEWKWANPEEVVEQAVDYKRPTYEEVMKTFAPYL 160
            D A  EF+ W+W   EE+V   V +KR  YEEV+ TF P+L
Sbjct: 125 TDHA--EFSCWRWIGAEEMVAAIVPFKRAVYEEVVATFRPHL 161

[Close]

BLAST of Chy10G173400 vs. ExPASy Swiss-Prot
Match: B9KN59 (RNA pyrophosphohydrolase OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) OX=557760 GN=rppH PE=3 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 3.9e-37
Identity = 78/162 (48.15%), Postives = 105/162 (64.81%), Query Frame = 0


Query: 1   MDSLPSGYRPNVGVCLINSDYQVFVASRLNVP-GAWQMPQGGIEDGEDPKLAAVRELRKE 60
           +D L   YRP VG+ LIN +  +F   R++ P  AWQMPQGGI++GE P+ AA+REL +E
Sbjct: 5   IDPLTLPYRPCVGIVLINREGLIFAGQRIDSPVPAWQMPQGGIDEGEKPREAALRELWEE 64

Query: 61  TGIVS--AEMVAEVPKWLTYDFPPAVKTKVNRLWGGQWHGQAQKWFLMRLTKDDSEINLD 120
           TGI +   E VA+ P W+TYD PP +   + R+WGG++ GQ QKWFL R    D E+ + 
Sbjct: 65  TGIPAERVEFVAKAPDWVTYDLPPEL---LGRVWGGKYRGQRQKWFLYRYLGTDEEVGIG 124

Query: 121 NDEADVEFAEWKWANPEEVVEQAVDYKRPTYEEVMKTFAPYL 160
            D A  EF+ W+W   EE+V   V +KR  YEEV+ TF P+L
Sbjct: 125 TDHA--EFSCWRWIGAEEMVAAIVPFKRAVYEEVVATFRPHL 161

[Close]

BLAST of Chy10G173400 vs. ExPASy TrEMBL
Match: A0A0A0KL56 (Nudix hydrolase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G002050 PE=3 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.1e-98
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MDSLPSGYRPNVGVCLINSDYQVFVASRLNVPGAWQMPQGGIEDGEDPKLAAVRELRKET 60
           MDSLPSGYRPNVGVCLINSDYQVFVASRLNVPGAWQMPQGGIEDGEDPKLAAVRELRKET
Sbjct: 1   MDSLPSGYRPNVGVCLINSDYQVFVASRLNVPGAWQMPQGGIEDGEDPKLAAVRELRKET 60

Query: 61  GIVSAEMVAEVPKWLTYDFPPAVKTKVNRLWGGQWHGQAQKWFLMRLTKDDSEINLDNDE 120
           GIVSAEMVAEVPKWLTYDFPPAVKTKVNRLWGGQWHGQAQKWFLMRLTKDDSEINLDNDE
Sbjct: 61  GIVSAEMVAEVPKWLTYDFPPAVKTKVNRLWGGQWHGQAQKWFLMRLTKDDSEINLDNDE 120

Query: 121 ADVEFAEWKWANPEEVVEQAVDYKRPTYEEVMKTFAPYLNGNKISTKCKSSKW 174
           ADVEFAEWKWANPEEVVEQAVDYKRPTYEEVMKTFAPYLNGNKISTKCKSSKW
Sbjct: 121 ADVEFAEWKWANPEEVVEQAVDYKRPTYEEVMKTFAPYLNGNKISTKCKSSKW 173

[Close]

BLAST of Chy10G173400 vs. ExPASy TrEMBL
Match: A0A1S3BZA8 (nudix hydrolase 25 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495074 PE=3 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 3.2e-98
Identity = 171/173 (98.84%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MDSLPSGYRPNVGVCLINSDYQVFVASRLNVPGAWQMPQGGIEDGEDPKLAAVRELRKET 60
           MDSLPSGYRPNVGVCLINSDYQVFVAS+LNVPGAWQMPQGGIEDGEDPKLAA+RELRKET
Sbjct: 1   MDSLPSGYRPNVGVCLINSDYQVFVASKLNVPGAWQMPQGGIEDGEDPKLAAIRELRKET 60

Query: 61  GIVSAEMVAEVPKWLTYDFPPAVKTKVNRLWGGQWHGQAQKWFLMRLTKDDSEINLDNDE 120
           GIVSAEMVAEVPKWLTYDFPPAVKTKVNRLWGGQWHGQAQKWFLMRLTKDDSEINLDNDE
Sbjct: 61  GIVSAEMVAEVPKWLTYDFPPAVKTKVNRLWGGQWHGQAQKWFLMRLTKDDSEINLDNDE 120

Query: 121 ADVEFAEWKWANPEEVVEQAVDYKRPTYEEVMKTFAPYLNGNKISTKCKSSKW 174
           ADVEFAEWKWANPEEVVEQAVDYKRPTYEEVMKTFAPYLNGNKISTKCKSSKW
Sbjct: 121 ADVEFAEWKWANPEEVVEQAVDYKRPTYEEVMKTFAPYLNGNKISTKCKSSKW 173

[Close]

BLAST of Chy10G173400 vs. ExPASy TrEMBL
Match: A0A6J1D8B1 (nudix hydrolase 25 OS=Momordica charantia OX=3673 GN=LOC111018292 PE=3 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 5.6e-95
Identity = 165/173 (95.38%), Postives = 171/173 (98.84%), Query Frame = 0


Query: 1   MDSLPSGYRPNVGVCLINSDYQVFVASRLNVPGAWQMPQGGIEDGEDPKLAAVRELRKET 60
           M+SLPSGYRPNVGVCLINSD QVFVASRLNVPGAWQMPQGGIEDGEDPKLAAVRELRKET
Sbjct: 1   MESLPSGYRPNVGVCLINSDNQVFVASRLNVPGAWQMPQGGIEDGEDPKLAAVRELRKET 60

Query: 61  GIVSAEMVAEVPKWLTYDFPPAVKTKVNRLWGGQWHGQAQKWFLMRLTKDDSEINLDNDE 120
           GIVSAE+VAEVP+WLTYDFPPAVKTKVNRLWGGQWHGQAQKWFLMR TKDDSEINLDNDE
Sbjct: 61  GIVSAEIVAEVPQWLTYDFPPAVKTKVNRLWGGQWHGQAQKWFLMRFTKDDSEINLDNDE 120

Query: 121 ADVEFAEWKWANPEEVVEQAVDYKRPTYEEVMKTFAPYLNGNKISTKCKSSKW 174
           AD+EFAEWKWANPEEV+EQAVDYKRPTYEEVMKTFAPYL+GNKISTKCKSSKW
Sbjct: 121 ADIEFAEWKWANPEEVIEQAVDYKRPTYEEVMKTFAPYLDGNKISTKCKSSKW 173

[Close]

BLAST of Chy10G173400 vs. ExPASy TrEMBL
Match: A0A6J1FLV4 (nudix hydrolase 25 OS=Cucurbita moschata OX=3662 GN=LOC111446990 PE=3 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 9.8e-92
Identity = 161/173 (93.06%), Postives = 169/173 (97.69%), Query Frame = 0


Query: 1   MDSLPSGYRPNVGVCLINSDYQVFVASRLNVPGAWQMPQGGIEDGEDPKLAAVRELRKET 60
           M+SLPSGYRPNVGVCLINSD QVFVASRLNVPGAWQMPQGGIEDGED KLAAVREL+KET
Sbjct: 1   MESLPSGYRPNVGVCLINSDSQVFVASRLNVPGAWQMPQGGIEDGEDLKLAAVRELKKET 60

Query: 61  GIVSAEMVAEVPKWLTYDFPPAVKTKVNRLWGGQWHGQAQKWFLMRLTKDDSEINLDNDE 120
           G+VSAE+VAEVPKWLTYDFP AVKTKVNRLWGGQWHGQAQKWFLMR+TKDDSEINLDNDE
Sbjct: 61  GVVSAEIVAEVPKWLTYDFPSAVKTKVNRLWGGQWHGQAQKWFLMRMTKDDSEINLDNDE 120

Query: 121 ADVEFAEWKWANPEEVVEQAVDYKRPTYEEVMKTFAPYLNGNKISTKCKSSKW 174
           ADVEFAEWKWA+PEEV+EQAVDYKRPTYEEVMKTFA YL+GNKISTKCKSSKW
Sbjct: 121 ADVEFAEWKWASPEEVIEQAVDYKRPTYEEVMKTFAAYLDGNKISTKCKSSKW 173

[Close]

BLAST of Chy10G173400 vs. ExPASy TrEMBL
Match: A0A6J1JPJ6 (nudix hydrolase 25 OS=Cucurbita maxima OX=3661 GN=LOC111488683 PE=3 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 1.3e-91
Identity = 160/173 (92.49%), Postives = 169/173 (97.69%), Query Frame = 0


Query: 1   MDSLPSGYRPNVGVCLINSDYQVFVASRLNVPGAWQMPQGGIEDGEDPKLAAVRELRKET 60
           M+SLPSGYRPN+GVCLINSD QVFVASRLNVPGAWQMPQGGIEDGED KLAAVREL+KET
Sbjct: 1   MESLPSGYRPNIGVCLINSDSQVFVASRLNVPGAWQMPQGGIEDGEDLKLAAVRELKKET 60

Query: 61  GIVSAEMVAEVPKWLTYDFPPAVKTKVNRLWGGQWHGQAQKWFLMRLTKDDSEINLDNDE 120
           G+VSAE+VAEVPKWLTYDFP AVKTKVNRLWGGQWHGQAQKWFLMR+TKDDSEINLDNDE
Sbjct: 61  GVVSAEIVAEVPKWLTYDFPSAVKTKVNRLWGGQWHGQAQKWFLMRMTKDDSEINLDNDE 120

Query: 121 ADVEFAEWKWANPEEVVEQAVDYKRPTYEEVMKTFAPYLNGNKISTKCKSSKW 174
           ADVEFAEWKWA+PEEV+EQAVDYKRPTYEEVMKTFA YL+GNKISTKCKSSKW
Sbjct: 121 ADVEFAEWKWASPEEVIEQAVDYKRPTYEEVMKTFAAYLDGNKISTKCKSSKW 173

[Close]

BLAST of Chy10G173400 vs. NCBI nr
Match: XP_004151519.1 (nudix hydrolase 25 [Cucumis sativus] >KGN49559.1 hypothetical protein Csa_018423 [Cucumis sativus])

HSP 1 Score: 367 bits (942), Expect = 2.23e-128
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MDSLPSGYRPNVGVCLINSDYQVFVASRLNVPGAWQMPQGGIEDGEDPKLAAVRELRKET 60
           MDSLPSGYRPNVGVCLINSDYQVFVASRLNVPGAWQMPQGGIEDGEDPKLAAVRELRKET
Sbjct: 1   MDSLPSGYRPNVGVCLINSDYQVFVASRLNVPGAWQMPQGGIEDGEDPKLAAVRELRKET 60

Query: 61  GIVSAEMVAEVPKWLTYDFPPAVKTKVNRLWGGQWHGQAQKWFLMRLTKDDSEINLDNDE 120
           GIVSAEMVAEVPKWLTYDFPPAVKTKVNRLWGGQWHGQAQKWFLMRLTKDDSEINLDNDE
Sbjct: 61  GIVSAEMVAEVPKWLTYDFPPAVKTKVNRLWGGQWHGQAQKWFLMRLTKDDSEINLDNDE 120

Query: 121 ADVEFAEWKWANPEEVVEQAVDYKRPTYEEVMKTFAPYLNGNKISTKCKSSKW 173
           ADVEFAEWKWANPEEVVEQAVDYKRPTYEEVMKTFAPYLNGNKISTKCKSSKW
Sbjct: 121 ADVEFAEWKWANPEEVVEQAVDYKRPTYEEVMKTFAPYLNGNKISTKCKSSKW 173

[Close]

BLAST of Chy10G173400 vs. NCBI nr
Match: XP_008454739.1 (PREDICTED: nudix hydrolase 25 isoform X1 [Cucumis melo])

HSP 1 Score: 365 bits (938), Expect = 9.07e-128
Identity = 171/173 (98.84%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MDSLPSGYRPNVGVCLINSDYQVFVASRLNVPGAWQMPQGGIEDGEDPKLAAVRELRKET 60
           MDSLPSGYRPNVGVCLINSDYQVFVAS+LNVPGAWQMPQGGIEDGEDPKLAA+RELRKET
Sbjct: 1   MDSLPSGYRPNVGVCLINSDYQVFVASKLNVPGAWQMPQGGIEDGEDPKLAAIRELRKET 60

Query: 61  GIVSAEMVAEVPKWLTYDFPPAVKTKVNRLWGGQWHGQAQKWFLMRLTKDDSEINLDNDE 120
           GIVSAEMVAEVPKWLTYDFPPAVKTKVNRLWGGQWHGQAQKWFLMRLTKDDSEINLDNDE
Sbjct: 61  GIVSAEMVAEVPKWLTYDFPPAVKTKVNRLWGGQWHGQAQKWFLMRLTKDDSEINLDNDE 120

Query: 121 ADVEFAEWKWANPEEVVEQAVDYKRPTYEEVMKTFAPYLNGNKISTKCKSSKW 173
           ADVEFAEWKWANPEEVVEQAVDYKRPTYEEVMKTFAPYLNGNKISTKCKSSKW
Sbjct: 121 ADVEFAEWKWANPEEVVEQAVDYKRPTYEEVMKTFAPYLNGNKISTKCKSSKW 173

[Close]

BLAST of Chy10G173400 vs. NCBI nr
Match: XP_022150013.1 (nudix hydrolase 25 [Momordica charantia])

HSP 1 Score: 355 bits (910), Expect = 1.69e-123
Identity = 165/173 (95.38%), Postives = 171/173 (98.84%), Query Frame = 0


Query: 1   MDSLPSGYRPNVGVCLINSDYQVFVASRLNVPGAWQMPQGGIEDGEDPKLAAVRELRKET 60
           M+SLPSGYRPNVGVCLINSD QVFVASRLNVPGAWQMPQGGIEDGEDPKLAAVRELRKET
Sbjct: 1   MESLPSGYRPNVGVCLINSDNQVFVASRLNVPGAWQMPQGGIEDGEDPKLAAVRELRKET 60

Query: 61  GIVSAEMVAEVPKWLTYDFPPAVKTKVNRLWGGQWHGQAQKWFLMRLTKDDSEINLDNDE 120
           GIVSAE+VAEVP+WLTYDFPPAVKTKVNRLWGGQWHGQAQKWFLMR TKDDSEINLDNDE
Sbjct: 61  GIVSAEIVAEVPQWLTYDFPPAVKTKVNRLWGGQWHGQAQKWFLMRFTKDDSEINLDNDE 120

Query: 121 ADVEFAEWKWANPEEVVEQAVDYKRPTYEEVMKTFAPYLNGNKISTKCKSSKW 173
           AD+EFAEWKWANPEEV+EQAVDYKRPTYEEVMKTFAPYL+GNKISTKCKSSKW
Sbjct: 121 ADIEFAEWKWANPEEVIEQAVDYKRPTYEEVMKTFAPYLDGNKISTKCKSSKW 173

[Close]

BLAST of Chy10G173400 vs. NCBI nr
Match: XP_038891479.1 (nudix hydrolase 25 [Benincasa hispida])

HSP 1 Score: 351 bits (901), Expect = 3.99e-122
Identity = 166/173 (95.95%), Postives = 169/173 (97.69%), Query Frame = 0


Query: 1   MDSLPSGYRPNVGVCLINSDYQVFVASRLNVPGAWQMPQGGIEDGEDPKLAAVRELRKET 60
           MDSLPSGYRPNVGVCLINSD QVFVASRLNVPGAWQMPQG IEDGEDPKLAAVRELRKET
Sbjct: 1   MDSLPSGYRPNVGVCLINSDNQVFVASRLNVPGAWQMPQGEIEDGEDPKLAAVRELRKET 60

Query: 61  GIVSAEMVAEVPKWLTYDFPPAVKTKVNRLWGGQWHGQAQKWFLMRLTKDDSEINLDNDE 120
           GIVSAE+VAEVPKWLTYDFPPAVKTKV+RLWGGQWHGQAQKWFLMRLTKDDSEINLDNDE
Sbjct: 61  GIVSAEIVAEVPKWLTYDFPPAVKTKVSRLWGGQWHGQAQKWFLMRLTKDDSEINLDNDE 120

Query: 121 ADVEFAEWKWANPEEVVEQAVDYKRPTYEEVMKTFAPYLNGNKISTKCKSSKW 173
           ADVEFAEWKWANP EVVEQAVDYKRPTYEEVMKTF PYL+GNKISTKCKSSKW
Sbjct: 121 ADVEFAEWKWANPAEVVEQAVDYKRPTYEEVMKTFGPYLDGNKISTKCKSSKW 173

[Close]

BLAST of Chy10G173400 vs. NCBI nr
Match: KAG7031452.1 (Nudix hydrolase 25 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 344 bits (883), Expect = 2.22e-119
Identity = 161/173 (93.06%), Postives = 169/173 (97.69%), Query Frame = 0


Query: 1   MDSLPSGYRPNVGVCLINSDYQVFVASRLNVPGAWQMPQGGIEDGEDPKLAAVRELRKET 60
           MDSLPSGYRPNVGVCLINSD QVFVASRLNVPGAWQMPQGGIEDGED KLAAVREL+KET
Sbjct: 1   MDSLPSGYRPNVGVCLINSDSQVFVASRLNVPGAWQMPQGGIEDGEDLKLAAVRELKKET 60

Query: 61  GIVSAEMVAEVPKWLTYDFPPAVKTKVNRLWGGQWHGQAQKWFLMRLTKDDSEINLDNDE 120
           G+VSAE+V+EVPKWLTYDFP AVKTKVNRLWGGQWHGQAQKWFLMR+TKDDSEINLDNDE
Sbjct: 61  GVVSAEIVSEVPKWLTYDFPSAVKTKVNRLWGGQWHGQAQKWFLMRMTKDDSEINLDNDE 120

Query: 121 ADVEFAEWKWANPEEVVEQAVDYKRPTYEEVMKTFAPYLNGNKISTKCKSSKW 173
           ADVEFAEWKWA+PEEV+EQAVDYKRPTYEEVMKTFA YL+GNKISTKCKSSKW
Sbjct: 121 ADVEFAEWKWASPEEVIEQAVDYKRPTYEEVMKTFAAYLDGNKISTKCKSSKW 173

[Close]

BLAST of Chy10G173400 vs. TAIR 10
Match: AT1G30110.1 (nudix hydrolase homolog 25 )

HSP 1 Score: 297.0 bits (759), Expect = 1.0e-80
Identity = 137/175 (78.29%), Postives = 155/175 (88.57%), Query Frame = 0


Query: 1   MDSLPSGYRPNVGVCLINSDYQVFVASRLNVPGAWQMPQGGIEDGEDPKLAAVRELRKET 60
           M++LP GYRPNVGVCLINSD  VFVASRLNVPGAWQMPQGGIEDGEDPK AA+REL++ET
Sbjct: 1   MENLPPGYRPNVGVCLINSDNLVFVASRLNVPGAWQMPQGGIEDGEDPKSAAMRELQEET 60

Query: 61  GIVSAEMVAEVPKWLTYDFPPAVKTKVNRLWGGQWHGQAQKWFLMRL--TKDDSEINLDN 120
           G+VSAE+V+EVP WLTYDFPPAVK KVNRLWGG+WHGQAQKW+L+RL   +D+ EINL N
Sbjct: 61  GVVSAEIVSEVPNWLTYDFPPAVKAKVNRLWGGEWHGQAQKWYLVRLRNDEDEKEINLAN 120

Query: 121 DEADVEFAEWKWANPEEVVEQAVDYKRPTYEEVMKTFAPYLNGNKISTKCKSSKW 174
           +EAD EFAEWKWA PEEVVEQAVDYKRPTYEEV+KTF  +LN    + KCKS+KW
Sbjct: 121 NEADSEFAEWKWAKPEEVVEQAVDYKRPTYEEVIKTFGSFLNDTGRAAKCKSAKW 175

[Close]

BLAST of Chy10G173400 vs. TAIR 10
Match: AT1G30110.2 (nudix hydrolase homolog 25 )

HSP 1 Score: 297.0 bits (759), Expect = 1.0e-80
Identity = 137/175 (78.29%), Postives = 155/175 (88.57%), Query Frame = 0


Query: 1   MDSLPSGYRPNVGVCLINSDYQVFVASRLNVPGAWQMPQGGIEDGEDPKLAAVRELRKET 60
           M++LP GYRPNVGVCLINSD  VFVASRLNVPGAWQMPQGGIEDGEDPK AA+REL++ET
Sbjct: 1   MENLPPGYRPNVGVCLINSDNLVFVASRLNVPGAWQMPQGGIEDGEDPKSAAMRELQEET 60

Query: 61  GIVSAEMVAEVPKWLTYDFPPAVKTKVNRLWGGQWHGQAQKWFLMRL--TKDDSEINLDN 120
           G+VSAE+V+EVP WLTYDFPPAVK KVNRLWGG+WHGQAQKW+L+RL   +D+ EINL N
Sbjct: 61  GVVSAEIVSEVPNWLTYDFPPAVKAKVNRLWGGEWHGQAQKWYLVRLRNDEDEKEINLAN 120

Query: 121 DEADVEFAEWKWANPEEVVEQAVDYKRPTYEEVMKTFAPYLNGNKISTKCKSSKW 174
           +EAD EFAEWKWA PEEVVEQAVDYKRPTYEEV+KTF  +LN    + KCKS+KW
Sbjct: 121 NEADSEFAEWKWAKPEEVVEQAVDYKRPTYEEVIKTFGSFLNDTGRAAKCKSAKW 175

[Close]

BLAST of Chy10G173400 vs. TAIR 10
Match: AT3G10620.1 (nudix hydrolase homolog 26 )

HSP 1 Score: 213.8 bits (543), Expect = 1.1e-55
Identity = 93/160 (58.13%), Postives = 123/160 (76.88%), Query Frame = 0


Query: 1   MDSLPSGYRPNVGVCLINSDYQVFVASRLNVPGAWQMPQGGIEDGEDPKLAAVRELRKET 60
           M+S P GYR NVGVCL+NS  ++F ASRL++P AWQMPQGGI++GEDP++A +REL++ET
Sbjct: 56  MESPPEGYRRNVGVCLMNSSKKIFTASRLDIPSAWQMPQGGIDEGEDPRVAVMRELKEET 115

Query: 61  GIVSAEMVAEVPKWLTYDFPPAVKTKVNRLWGGQWHGQAQKWFLMRLTKDDSEINLDNDE 120
           G+ SAE++AE P W+TYDFPP V+ K+   WG  W GQAQKWFL++ T  D EINL  D 
Sbjct: 116 GVHSAEILAEAPHWITYDFPPDVREKLKVRWGSDWKGQAQKWFLLKFTGKDEEINLLGDG 175

Query: 121 AD-VEFAEWKWANPEEVVEQAVDYKRPTYEEVMKTFAPYL 160
            +  EF EW W +P++VVE AV++K+P Y+EVM  FA +L
Sbjct: 176 TEKPEFGEWSWTSPDQVVENAVEFKKPVYKEVMSAFASHL 215

[Close]

BLAST of Chy10G173400 vs. TAIR 10
Match: AT5G06340.1 (nudix hydrolase homolog 27 )

HSP 1 Score: 191.8 bits (486), Expect = 4.6e-49
Identity = 87/159 (54.72%), Postives = 113/159 (71.07%), Query Frame = 0


Query: 1   MDSLPSGYRPNVGVCLINSDYQVFVASRLNVPGAWQMPQGGIEDGEDPKLAAVRELRKET 60
           ++S P GYR NVG+CL++   ++F AS++++P  WQMPQGG ++GED + AA RELR+ET
Sbjct: 55  VESPPVGYRKNVGICLVSPCRKIFTASKIHIPDTWQMPQGGADEGEDLRNAAFRELREET 114

Query: 61  GIVSAEMVAEVPKWLTYDFPPAVKTKVNRLWGGQWHGQAQKWFLMRLTKDDSEINLDND- 120
           G+ SAE +AE+P WLTYDFP  VK K+NR W   + GQAQKWFL + T  + EINL  D 
Sbjct: 115 GVTSAEFIAEIPNWLTYDFPREVKDKLNRKWRTSYKGQAQKWFLFKFTGKEEEINLLGDG 174

Query: 121 EADVEFAEWKWANPEEVVEQAVDYKRPTYEEVMKTFAPY 159
            A  EF  W W  PE+V+E AV +KRP YE V+K F PY
Sbjct: 175 TAKPEFKVWSWMLPEQVIEHAVYFKRPVYEHVIKQFNPY 213

[Close]

BLAST of Chy10G173400 vs. TAIR 10
Match: AT5G47650.1 (nudix hydrolase homolog 2 )

HSP 1 Score: 47.0 bits (110), Expect = 1.8e-05
Identity = 40/145 (27.59%), Postives = 68/145 (46.90%), Query Frame = 0


Query: 2   DSLP--SGYRPNVGVCLINSDYQVFV----ASRLNVPGAWQMPQGGIEDGEDPKLAAVRE 61
           D+LP  + +R  +G  +IN + +V V      R    G W+ P G + +GED    +VRE
Sbjct: 103 DTLPANASHRVGIGAFVINHNKEVLVVQEKTGRFQGQGIWKFPTGVVNEGEDIHDGSVRE 162

Query: 62  LRKETGIVSAEMVAEVPKWLTYDFPPAVKTKVNRLWGGQWHGQAQKWFLMRLTKDDSEIN 121
           +++ETG+ +     E  + L +           R     + G++  +F+  L     EIN
Sbjct: 163 VKEETGVDT-----EFDQILAF-----------RQTHKAFFGKSDLFFVCMLKPLSLEIN 222

Query: 122 LDNDEADVEFAEW-KWANPEEVVEQ 140
               E+++E A+W  W   EE + Q
Sbjct: 223 A--QESEIEAAQWMPW---EEYINQ 226

The following BLAST results are available for this feature:

BLAST of Chy10G173400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C6Z2	1.4e-79	78.29	Nudix hydrolase 25 OS=Arabidopsis thaliana OX=3702 GN=NUDT25 PE=1 SV=1	[more]
Q9CAF2	1.6e-54	58.13	Nudix hydrolase 26, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NUDT26 PE=1...	[more]
Q9FNH4	6.4e-48	54.72	Nudix hydrolase 27, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NUDT27 PE=1...	[more]
Q3IZC1	3.9e-37	48.15	RNA pyrophosphohydrolase OS=Rhodobacter sphaeroides (strain ATCC 17023 / DSM 158...	[more]
B9KN59	3.9e-37	48.15	RNA pyrophosphohydrolase OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) ...	[more]

BLAST of Chy10G173400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KL56	1.1e-98	100.00	Nudix hydrolase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G00...	[more]
A0A1S3BZA8	3.2e-98	98.84	nudix hydrolase 25 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495074 PE=3 SV=1	[more]
A0A6J1D8B1	5.6e-95	95.38	nudix hydrolase 25 OS=Momordica charantia OX=3673 GN=LOC111018292 PE=3 SV=1	[more]
A0A6J1FLV4	9.8e-92	93.06	nudix hydrolase 25 OS=Cucurbita moschata OX=3662 GN=LOC111446990 PE=3 SV=1	[more]
A0A6J1JPJ6	1.3e-91	92.49	nudix hydrolase 25 OS=Cucurbita maxima OX=3661 GN=LOC111488683 PE=3 SV=1	[more]

BLAST of Chy10G173400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004151519.1	2.23e-128	100.00	nudix hydrolase 25 [Cucumis sativus] >KGN49559.1 hypothetical protein Csa_018423...	[more]
XP_008454739.1	9.07e-128	98.84	PREDICTED: nudix hydrolase 25 isoform X1 [Cucumis melo]	[more]
XP_022150013.1	1.69e-123	95.38	nudix hydrolase 25 [Momordica charantia]	[more]
XP_038891479.1	3.99e-122	95.95	nudix hydrolase 25 [Benincasa hispida]	[more]
KAG7031452.1	2.22e-119	93.06	Nudix hydrolase 25 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Chy10G173400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G30110.1	1.0e-80	78.29	nudix hydrolase homolog 25	[more]
AT1G30110.2	1.0e-80	78.29	nudix hydrolase homolog 25	[more]
AT3G10620.1	1.1e-55	58.13	nudix hydrolase homolog 26	[more]
AT5G06340.1	4.6e-49	54.72	nudix hydrolase homolog 27	[more]
AT5G47650.1	1.8e-05	27.59	nudix hydrolase homolog 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020476	NUDIX hydrolase	PRINTS	PR00502	NUDIXFAMILY	coord: 35..49 score: 41.5 coord: 49..64 score: 43.63
IPR000086	NUDIX hydrolase domain	PFAM	PF00293	NUDIX	coord: 8..149 e-value: 1.4E-23 score: 83.4
IPR000086	NUDIX hydrolase domain	PROSITE	PS51462	NUDIX	coord: 7..153 score: 20.639574
None	No IPR available	GENE3D	3.90.79.10	Nucleoside Triphosphate Pyrophosphohydrolase	coord: 1..159 e-value: 1.3E-47 score: 163.6
None	No IPR available	PANTHER	PTHR11839:SF27	BNACNNG74470D PROTEIN	coord: 1..173
None	No IPR available	PANTHER	PTHR11839	UDP/ADP-SUGAR PYROPHOSPHATASE	coord: 1..173
IPR022927	RNA pyrophosphohydrolase RppH	HAMAP	MF_00298	Nudix_RppH	coord: 2..160 score: 31.013643
IPR022927	RNA pyrophosphohydrolase RppH	CDD	cd03671	Ap4A_hydrolase_plant_like	coord: 7..155 e-value: 2.15851E-71 score: 210.14
IPR015797	NUDIX hydrolase-like domain superfamily	SUPERFAMILY	55811	Nudix	coord: 7..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy10G173400.1	Chy10G173400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015967	diadenosine tetraphosphate catabolic process
biological_process	GO:0019693	ribose phosphate metabolic process
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0034432	bis(5'-adenosyl)-pentaphosphatase activity
molecular_function	GO:0004081	bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity
molecular_function	GO:0008893	guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity