Chy3G056580 (gene) Cucumber (hystrix) v1

Overview


Name	Chy3G056580
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Transcription and mRNA export factor ENY2
Location	chrH03: 9355716 .. 9357952 (-)
RNA-Seq Expression	Chy3G056580
Synteny	Chy3G056580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGCTAATTCTTCAAGCTTCAATCCATGGCTATAATCGCCATGCCCTAATTTCTGCTGCGACAGGAGGGCTTCTATTAATCGGCCTCCGACGCCTGAACCAGAGGATGATCGAGAACACCAACCCACTTTTCAAGAATCAATCAACATCAAGGTCTGCAGTTTATTCGGTTCGTTTGTCTTTTTTTCTCTATGATTTTGATTGGATTTCTTCCTGGACAGCTGATTGAAAGTGGTGAGAAAGAGCGGCTGAAAGAGCTCTTGAGAGAGAGGCTAATTGAATGCGGCTGGAAAGATGAGATGAAAGCACTTTGCAGGTTCCACTCTCCTCTGTATTCATTCAATTCATGTATCGATTTAGTGTTTCTGTTGTTTTTCTACAAATGTTTGATCATTTCCTGTACCGTAGTAGTCACTAATTAACGAGTAATTGCTGAAAGAAAAACGCTAGAGGGCGTGGCTTGATGTGTAAAGGTTGCATTGAAATTAATTCAAACGGAACATTAGAACTGATGCAGTTCTAGTTTTGTCTAAGGGTCTTCCATTAACAGTCCTGGAAGTGGAGATTTGCTACATGATCCTATCAATTCTTTCATTCCAAGGCTAAGACTTTTGAATCTCCCTGTTGTGTCTCTAGGGCATATGTAAGGAAGAAAGGAAGGAACAATGTCAGTGTTGATGACCTTGTGCAGGTCATTACTCCAAAAGGCAGAGGTTCGTTCTCACTTTCCATTTTAGAAGTGGTTGCTATTGGTTGCACTTATCATAAACTTCTGATACTTTATCATTTGATCGCTTTTGCTGCTGAAAGGATCCTTGATATGCTACACTCTCTTAACAATTGTTACATATGATGCAAGAAGACTTCACGTTTATGTATCCTAGAAAGGCTTATAGTTTACGAACTTTTATGGCACAAGATGAGGTGCAACCAACTCTATCTGTATACAAACCCAATTATATTCTGTCCTGCATTTGTAAGCCTGTGAGATTCCTGTGCTCACCACATTCCTCACACCTATTATCCTGAATGCTTAAAGTACGGTGATTTGGAGTAATCAAATTAGAGGACCCATGTGCCAGTGTATGAGAGATTATCGGGGGATTTAGTACAGGTCTAGGGGGCTCAAGCCTCCCTCAACATTGTGTTCTTTATGTATATATATAACTGTAACTATACCAATACCATATCTAACCCAGTGATAAAAATGTCATCCAGCCCCTCTAGACCCCAGTTCAAACCCCACTGCTTACATTTTTTTTTCAGATTATTTTTACCAAATTATGAAGCCCCCATAAAAAAATCTGGATCCGCAGCTGTATGAGTTCATAGCTATCAACCCAATATAAAAAGTCAATAACAATAGGAAAGCCTTTACATTTGAAGAATTCCTTTACATCAAATGAAATTATAAGGAGTCAAATTGGATGTTATGACTCAGAGAATGATTGATAATTAGAAAATATATTGAGTAAAACATTTTGCCCAAAACAATAGAACCGATGAGTTATGCTTGCTTGATAGAAAGTAGTCATGAACTATTCAAAGCTCATGCAAATTTCACTTCTTATAAATTGTTAAGGTGAATTCTTGTTATATATGTAGTGTGTATTCGTATGTGTGTCATTGTTGAGGAATATTCTGAATATGAGTCGGTAAGAACTTGGAAAAAAACTCACTTTTACTCCTGGCGAAGTTTGATTTTCACTCTTCCAAAGCACCAAGCTTAACACAATGGAGAAAGAATTGAAGTCATCAAGGGGTTTTCATTGGTTCTCATGAGGGACACCCTCAACAATTTAAACTTGCATCCATTATGTTACCGAGGATAATGTGTTTTTAAACTGCACCTAAAGAATCAACCACAAGAGGAGACTTCCATAGCCATTTACCAATTAAACCTCCATAGTCCATTATGTTCCGGTTGATTTTTTTGTTGTTCACGTTTTAAAAGCTTTCTTATGAAGGTGAATTGCTCGCCACGTTAAAATGTACTTGCCATGACATTAACTTTTGTTGTCCTCTTTCTGTACTCTGACTCGAGAGTTTTGTTTTGATGACTCGCATATCTAGTCATAATCTTATCTCATTCAACCTTTCAAGTGTGCTTCTGGTTATTGCCAAACTCGTTGCTGACTTTAGTTCAAATGATGTCGTGTAGCCTCAGTTCCAGATTCAGTGAAAGCCGAGCTGCTGCAGCGCATCCGATCTTTCCTTGGATCAACAGCCATCTAA

mRNA sequence

ATGGGGCTAATTCTTCAAGCTTCAATCCATGGCTATAATCGCCATGCCCTAATTTCTGCTGCGACAGGAGGGCTTCTATTAATCGGCCTCCGACGCCTGAACCAGAGGATGATCGAGAACACCAACCCACTTTTCAAGAATCAATCAACATCAAGGTCTGCAGTTTATTCGCTGATTGAAAGTGGTGAGAAAGAGCGGCTGAAAGAGCTCTTGAGAGAGAGGCTAATTGAATGCGGCTGGAAAGATGAGATGAAAGCACTTTGCAGGGCATATGTAAGGAAGAAAGGAAGGAACAATGTCAGTGTTGATGACCTTGTGCAGGTCATTACTCCAAAAGGCAGAGCCTCAGTTCCAGATTCAGTGAAAGCCGAGCTGCTGCAGCGCATCCGATCTTTCCTTGGATCAACAGCCATCTAA

Coding sequence (CDS)

ATGGGGCTAATTCTTCAAGCTTCAATCCATGGCTATAATCGCCATGCCCTAATTTCTGCTGCGACAGGAGGGCTTCTATTAATCGGCCTCCGACGCCTGAACCAGAGGATGATCGAGAACACCAACCCACTTTTCAAGAATCAATCAACATCAAGGTCTGCAGTTTATTCGCTGATTGAAAGTGGTGAGAAAGAGCGGCTGAAAGAGCTCTTGAGAGAGAGGCTAATTGAATGCGGCTGGAAAGATGAGATGAAAGCACTTTGCAGGGCATATGTAAGGAAGAAAGGAAGGAACAATGTCAGTGTTGATGACCTTGTGCAGGTCATTACTCCAAAAGGCAGAGCCTCAGTTCCAGATTCAGTGAAAGCCGAGCTGCTGCAGCGCATCCGATCTTTCCTTGGATCAACAGCCATCTAA

Protein sequence

MGLILQASIHGYNRHALISAATGGLLLIGLRRLNQRMIENTNPLFKNQSTSRSAVYSLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI*

Homology

[Close]

BLAST of Chy3G056580 vs. ExPASy Swiss-Prot
Match: Q6NQ54 (Transcription and mRNA export factor ENY2 OS=Arabidopsis thaliana OX=3702 GN=ENY2 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 3.8e-27
Identity = 59/94 (62.77%), Postives = 78/94 (82.98%), Query Frame = 0


Query: 46  KNQSTSRSAV-YSLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDD 105
           K++ T R  +   L+ESGEKE L EL+R+RL+ECGWKDEM+  CR +V+KKGR +V+VD+
Sbjct: 22  KDKVTLREIINVKLVESGEKENLMELVRDRLVECGWKDEMRIACREHVKKKGRKDVTVDE 81

Query: 106 LVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI 139
           L++VITPKGRASVPDSVKAELL RI++F+ S A+
Sbjct: 82  LIRVITPKGRASVPDSVKAELLNRIQNFIVSAAL 115

[Close]

BLAST of Chy3G056580 vs. ExPASy Swiss-Prot
Match: Q6DH42 (Transcription and mRNA export factor ENY2 OS=Danio rerio OX=7955 GN=eny2 PE=3 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.4e-24
Identity = 56/87 (64.37%), Postives = 72/87 (82.76%), Query Frame = 0


Query: 48  QSTSRSAV-YSLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLV 107
           +S  R+A+   LIE GE+ERLKELLR +LIECGW+D++KALC+  +++KG  NV+V+DLV
Sbjct: 4   ESQMRAAINQKLIEMGERERLKELLRAKLIECGWRDQLKALCKEVIKEKGIENVTVEDLV 63

Query: 108 QVITPKGRASVPDSVKAELLQRIRSFL 134
             +TPKGRA VPDSVK ELLQRIR+FL
Sbjct: 64  AGVTPKGRALVPDSVKKELLQRIRAFL 90

[Close]

BLAST of Chy3G056580 vs. ExPASy Swiss-Prot
Match: Q3ZBJ0 (Transcription and mRNA export factor ENY2 OS=Bos taurus OX=9913 GN=ENY2 PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.8e-24
Identity = 55/80 (68.75%), Postives = 67/80 (83.75%), Query Frame = 0


Query: 58  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASV 117
           LIE+GE+ERLKELLR +LIECGWKD++KA C+  +++KG  +V+VDDLV  ITPKGRA V
Sbjct: 20  LIETGERERLKELLRAKLIECGWKDQLKAHCKEVIKEKGLEHVTVDDLVAEITPKGRALV 79

Query: 118 PDSVKAELLQRIRSFLGSTA 138
           PDSVK ELLQRIR+FL   A
Sbjct: 80  PDSVKKELLQRIRTFLAQHA 99

[Close]

BLAST of Chy3G056580 vs. ExPASy Swiss-Prot
Match: Q9NPA8 (Transcription and mRNA export factor ENY2 OS=Homo sapiens OX=9606 GN=ENY2 PE=1 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.8e-24
Identity = 55/80 (68.75%), Postives = 67/80 (83.75%), Query Frame = 0


Query: 58  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASV 117
           LIE+GE+ERLKELLR +LIECGWKD++KA C+  +++KG  +V+VDDLV  ITPKGRA V
Sbjct: 20  LIETGERERLKELLRAKLIECGWKDQLKAHCKEVIKEKGLEHVTVDDLVAEITPKGRALV 79

Query: 118 PDSVKAELLQRIRSFLGSTA 138
           PDSVK ELLQRIR+FL   A
Sbjct: 80  PDSVKKELLQRIRTFLAQHA 99

[Close]

BLAST of Chy3G056580 vs. ExPASy Swiss-Prot
Match: Q9JIX0 (Transcription and mRNA export factor ENY2 OS=Mus musculus OX=10090 GN=Eny2 PE=1 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.8e-24
Identity = 55/80 (68.75%), Postives = 67/80 (83.75%), Query Frame = 0


Query: 58  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASV 117
           LIE+GE+ERLKELLR +LIECGWKD++KA C+  +++KG  +V+VDDLV  ITPKGRA V
Sbjct: 20  LIETGERERLKELLRAKLIECGWKDQLKAHCKEVIKEKGLEHVTVDDLVAEITPKGRALV 79

Query: 118 PDSVKAELLQRIRSFLGSTA 138
           PDSVK ELLQRIR+FL   A
Sbjct: 80  PDSVKKELLQRIRTFLAQHA 99

[Close]

BLAST of Chy3G056580 vs. ExPASy TrEMBL
Match: A0A6J1BSW0 (Transcription and mRNA export factor ENY2 OS=Momordica charantia OX=3673 GN=LOC111004543 PE=3 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 6.1e-36
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 58  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASV 117
           LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASV
Sbjct: 31  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASV 90

Query: 118 PDSVKAELLQRIRSFLGSTAI 139
           PDSVKAELLQRIRSFLGSTAI
Sbjct: 91  PDSVKAELLQRIRSFLGSTAI 111

[Close]

BLAST of Chy3G056580 vs. ExPASy TrEMBL
Match: A0A0A0KIM7 (Transcription and mRNA export factor ENY2 OS=Cucumis sativus OX=3659 GN=Csa_6G365120 PE=3 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 8.0e-36
Identity = 83/94 (88.30%), Postives = 88/94 (93.62%), Query Frame = 0


Query: 46  KNQSTSRSAV-YSLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDD 105
           ++Q T + ++   LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDD
Sbjct: 18  EHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDD 77

Query: 106 LVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI 139
           LVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI
Sbjct: 78  LVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI 111

[Close]

BLAST of Chy3G056580 vs. ExPASy TrEMBL
Match: A0A6J1GGQ4 (Transcription and mRNA export factor ENY2 OS=Cucurbita moschata OX=3662 GN=LOC111454046 PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 3.0e-35
Identity = 80/81 (98.77%), Postives = 80/81 (98.77%), Query Frame = 0


Query: 58  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASV 117
           LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASV
Sbjct: 31  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASV 90

Query: 118 PDSVKAELLQRIRSFLGSTAI 139
           PDSVKAELLQRIRSFL STAI
Sbjct: 91  PDSVKAELLQRIRSFLASTAI 111

[Close]

BLAST of Chy3G056580 vs. ExPASy TrEMBL
Match: A0A1S3BDR5 (Transcription and mRNA export factor ENY2 OS=Cucumis melo OX=3656 GN=LOC103488502 PE=3 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 4.0e-35
Identity = 82/94 (87.23%), Postives = 87/94 (92.55%), Query Frame = 0


Query: 46  KNQSTSRSAV-YSLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDD 105
           ++Q T + ++   LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDD
Sbjct: 18  EHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDD 77

Query: 106 LVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI 139
           LVQVITPKGRASVPDSVKAELLQRIRSFL STAI
Sbjct: 78  LVQVITPKGRASVPDSVKAELLQRIRSFLASTAI 111

[Close]

BLAST of Chy3G056580 vs. ExPASy TrEMBL
Match: A0A6J1KQ41 (Transcription and mRNA export factor ENY2 OS=Cucurbita maxima OX=3661 GN=LOC111496587 PE=3 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 6.8e-35
Identity = 79/81 (97.53%), Postives = 80/81 (98.77%), Query Frame = 0


Query: 58  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASV 117
           LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASV
Sbjct: 31  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASV 90

Query: 118 PDSVKAELLQRIRSFLGSTAI 139
           PDSVKAELLQRIR+FL STAI
Sbjct: 91  PDSVKAELLQRIRTFLASTAI 111

[Close]

BLAST of Chy3G056580 vs. NCBI nr
Match: XP_011657386.1 (transcription and mRNA export factor ENY2 [Cucumis sativus] >KGN47611.1 hypothetical protein Csa_019040 [Cucumis sativus])

HSP 1 Score: 159 bits (402), Expect = 1.40e-47
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 58  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASV 117
           LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASV
Sbjct: 31  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASV 90

Query: 118 PDSVKAELLQRIRSFLGSTAI 138
           PDSVKAELLQRIRSFLGSTAI
Sbjct: 91  PDSVKAELLQRIRSFLGSTAI 111

[Close]

BLAST of Chy3G056580 vs. NCBI nr
Match: XP_022131273.1 (transcription and mRNA export factor SUS1 [Momordica charantia])

HSP 1 Score: 159 bits (402), Expect = 1.40e-47
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 58  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASV 117
           LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASV
Sbjct: 31  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASV 90

Query: 118 PDSVKAELLQRIRSFLGSTAI 138
           PDSVKAELLQRIRSFLGSTAI
Sbjct: 91  PDSVKAELLQRIRSFLGSTAI 111

[Close]

BLAST of Chy3G056580 vs. NCBI nr
Match: XP_038884208.1 (transcription and mRNA export factor ENY2 [Benincasa hispida] >XP_038884209.1 transcription and mRNA export factor ENY2 [Benincasa hispida])

HSP 1 Score: 157 bits (396), Expect = 1.15e-46
Identity = 80/81 (98.77%), Postives = 80/81 (98.77%), Query Frame = 0


Query: 58  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASV 117
           LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASV
Sbjct: 31  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASV 90

Query: 118 PDSVKAELLQRIRSFLGSTAI 138
           PDSVKAELLQRIRSFL STAI
Sbjct: 91  PDSVKAELLQRIRSFLASTAI 111

[Close]

BLAST of Chy3G056580 vs. NCBI nr
Match: XP_008445505.1 (PREDICTED: transcription and mRNA export factor SUS1 isoform X2 [Cucumis melo])

HSP 1 Score: 157 bits (396), Expect = 1.15e-46
Identity = 80/81 (98.77%), Postives = 80/81 (98.77%), Query Frame = 0


Query: 58  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASV 117
           LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASV
Sbjct: 31  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASV 90

Query: 118 PDSVKAELLQRIRSFLGSTAI 138
           PDSVKAELLQRIRSFL STAI
Sbjct: 91  PDSVKAELLQRIRSFLASTAI 111

[Close]

BLAST of Chy3G056580 vs. NCBI nr
Match: XP_022951096.1 (transcription and mRNA export factor SUS1 [Cucurbita moschata] >XP_022951097.1 transcription and mRNA export factor SUS1 [Cucurbita moschata])

HSP 1 Score: 157 bits (396), Expect = 1.15e-46
Identity = 80/81 (98.77%), Postives = 80/81 (98.77%), Query Frame = 0


Query: 58  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASV 117
           LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASV
Sbjct: 31  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASV 90

Query: 118 PDSVKAELLQRIRSFLGSTAI 138
           PDSVKAELLQRIRSFL STAI
Sbjct: 91  PDSVKAELLQRIRSFLASTAI 111

[Close]

BLAST of Chy3G056580 vs. TAIR 10
Match: AT3G27100.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, enhancer of yellow 2 (InterPro:IPR018783); Has 288 Blast hits to 288 proteins in 94 species: Archae - 0; Bacteria - 0; Metazoa - 197; Fungi - 20; Plants - 51; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). )

HSP 1 Score: 122.5 bits (306), Expect = 2.7e-28
Identity = 59/94 (62.77%), Postives = 78/94 (82.98%), Query Frame = 0


Query: 46  KNQSTSRSAV-YSLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDD 105
           K++ T R  +   L+ESGEKE L EL+R+RL+ECGWKDEM+  CR +V+KKGR +V+VD+
Sbjct: 22  KDKVTLREIINVKLVESGEKENLMELVRDRLVECGWKDEMRIACREHVKKKGRKDVTVDE 81

Query: 106 LVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI 139
           L++VITPKGRASVPDSVKAELL RI++F+ S A+
Sbjct: 82  LIRVITPKGRASVPDSVKAELLNRIQNFIVSAAL 115

[Close]

BLAST of Chy3G056580 vs. TAIR 10
Match: AT3G27100.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, enhancer of yellow 2 (InterPro:IPR018783); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 91.7 bits (226), Expect = 5.1e-19
Identity = 42/73 (57.53%), Postives = 58/73 (79.45%), Query Frame = 0


Query: 46  KNQSTSRSAV-YSLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDD 105
           K++ T R  +   L+ESGEKE L EL+R+RL+ECGWKDEM+  CR +V+KKGR +V+VD+
Sbjct: 22  KDKVTLREIINVKLVESGEKENLMELVRDRLVECGWKDEMRIACREHVKKKGRKDVTVDE 81

Query: 106 LVQVITPKGRASV 118
           L++VITPKGR  +
Sbjct: 82  LIRVITPKGRGKI 94

The following BLAST results are available for this feature:

BLAST of Chy3G056580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NQ54	3.8e-27	62.77	Transcription and mRNA export factor ENY2 OS=Arabidopsis thaliana OX=3702 GN=ENY...	[more]
Q6DH42	1.4e-24	64.37	Transcription and mRNA export factor ENY2 OS=Danio rerio OX=7955 GN=eny2 PE=3 SV...	[more]
Q3ZBJ0	1.8e-24	68.75	Transcription and mRNA export factor ENY2 OS=Bos taurus OX=9913 GN=ENY2 PE=3 SV=...	[more]
Q9NPA8	1.8e-24	68.75	Transcription and mRNA export factor ENY2 OS=Homo sapiens OX=9606 GN=ENY2 PE=1 S...	[more]
Q9JIX0	1.8e-24	68.75	Transcription and mRNA export factor ENY2 OS=Mus musculus OX=10090 GN=Eny2 PE=1 ...	[more]

BLAST of Chy3G056580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BSW0	6.1e-36	100.00	Transcription and mRNA export factor ENY2 OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A0A0KIM7	8.0e-36	88.30	Transcription and mRNA export factor ENY2 OS=Cucumis sativus OX=3659 GN=Csa_6G36...	[more]
A0A6J1GGQ4	3.0e-35	98.77	Transcription and mRNA export factor ENY2 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A1S3BDR5	4.0e-35	87.23	Transcription and mRNA export factor ENY2 OS=Cucumis melo OX=3656 GN=LOC10348850...	[more]
A0A6J1KQ41	6.8e-35	97.53	Transcription and mRNA export factor ENY2 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]

BLAST of Chy3G056580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011657386.1	1.40e-47	100.00	transcription and mRNA export factor ENY2 [Cucumis sativus] >KGN47611.1 hypothet...	[more]
XP_022131273.1	1.40e-47	100.00	transcription and mRNA export factor SUS1 [Momordica charantia]	[more]
XP_038884208.1	1.15e-46	98.77	transcription and mRNA export factor ENY2 [Benincasa hispida] >XP_038884209.1 tr...	[more]
XP_008445505.1	1.15e-46	98.77	PREDICTED: transcription and mRNA export factor SUS1 isoform X2 [Cucumis melo]	[more]
XP_022951096.1	1.15e-46	98.77	transcription and mRNA export factor SUS1 [Cucurbita moschata] >XP_022951097.1 t...	[more]

BLAST of Chy3G056580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G27100.1	2.7e-28	62.77	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT3G27100.2	5.1e-19	57.53	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018783	Transcription factor, enhancer of yellow 2	PFAM	PF10163	EnY2	coord: 57..133 e-value: 2.1E-31 score: 108.1
IPR018783	Transcription factor, enhancer of yellow 2	PANTHER	PTHR12514	ENHANCER OF YELLOW 2 TRANSCRIPTION FACTOR	coord: 57..137
IPR018783	Transcription factor, enhancer of yellow 2	HAMAP	MF_03046	ENY2_Sus1	coord: 49..136 score: 20.54953
IPR038212	Transcription factor EnY2 superfamily	GENE3D	1.10.246.140		coord: 45..137 e-value: 8.0E-35 score: 121.0
None	No IPR available	PANTHER	PTHR12514:SF3	TRANSCRIPTION AND MRNA EXPORT FACTOR ENY2	coord: 57..137

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy3G056580.1	Chy3G056580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006325	chromatin organization
biological_process	GO:0016578	histone deubiquitination
biological_process	GO:0016973	poly(A)+ mRNA export from nucleus
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0015031	protein transport
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006368	transcription elongation from RNA polymerase II promoter
biological_process	GO:0006406	mRNA export from nucleus
cellular_component	GO:0071819	DUBm complex
cellular_component	GO:0005643	nuclear pore
cellular_component	GO:0000124	SAGA complex
cellular_component	GO:0070390	transcription export complex 2
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0003713	transcription coactivator activity