Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACCGCGCATCAGGCATAAGTGAGATTCGTGATTCAGGTTATGTAACAAATGGGCAATTCGTTGATGGGCCTTTAATTGATTATGGACCGACTAAATTGAATGATGGGCCGGCTGGAGTTGATGGGTTGGATACAAAAAATGGAAAAGAAGTCGGTGAAGTTCAGAATTCAAATGGTGGTGTAATGCAGAGAAGAAATCATGGTGAAGGGAATAATTGTCCTAAATCTTCATGGGCTTCCTTATTTGGATCGACAAGTGGAAATTCTATGATCTATACGCCTCCTACCTCCGTAGGGGATAAAATTGTGGTTATCCCTACCGAAGAGGTTATTGGTCAAGGAGTTCGAGTGTGGGAAAATTCCCTAGTAGGGAAATTAATTGATGCAAAATTGCGTTATGTAGTCATATATCGACTTATAGAGAAAATTTGAGGTAGAATTGAAATGCTAACGATCACAATTCTGGAGAATAGTCTCATCTGCTTCTAATTTAGACACCCAAAATTGGTTGAATGGATCCTTTCCCGTGGACCGTGGCATCTTGGGGGAAAACCCATGCTCCTCCGCAAATGGACCCCAAGTATTGTCCCTGAATTTTTTGTTTTTTTATTATGTTCCTGTATGGATTAAATTAGGTAGGGTCCCAATAGAGTTATGGACAGATGCCGGATTGGCTGTTGTTGCTAGTGCTATAGGCAAACCCATATCCTAAAATCTTGCTACCAAGGAAAGACGAAGGCTGTCATATGCTCGAGTATGTGTTGAACTAAATGTAGACTGCCCTATGCTTGCTGAAATAACAGTAAACCTTAGGGGAGAGGATTTCATTGTGACTGTAAATTATGAGTGGAAGCCTCGAAAGTGTAACCTGTGTCGGTCTTTTGGACACTGTAATGATACCTGTCCTAAGATTGTAGAAAACAAAGTCCTTAGAGAGGAAGATGTGAGCAAGGTGGTTCCTAATAAAGGGGAGGAACTGACAAGTGTGGCTTATGGAGATGTAGTGTTGGAGTTCTTTAAACAGTTGGAAGAAGATGAGATTAATAGCAACCCCATAAGGCCTATTAAGGAAAAGGTAGTAGAAAATCGAAATGATTTTACTCTTGTCACTAGGAAGAAAAGGGAGTTGGTTTTTGTACAAGATAAGGGCGAAAGTGTGGAGGTGACTATGCCTAACTCTTTTGGCAGCCTTATGGAGTTGGGTGAAGGAGACAAGTGGGCCTTATCTATAGTGGATGGCTTTCCCCCACCCCAACAG
mRNA sequence
ATGAACCGCGCATCAGGCATAAGTGAGATTCGTGATTCAGGTTATGTAACAAATGGGCAATTCGTTGATGGGCCTTTAATTGATTATGGACCGACTAAATTGAATGATGGGCCGGCTGGAGTTGATGGGTTGGATACAAAAAATGGAAAAGAAGTCGGTGAAGTTCAGAATTCAAATGGTGGTGTAATGCAGAGAAGAAATCATGGTGAAGGGAATAATTGTCCTAAATCTTCATGGGCTTCCTTATTTGGATCGACAAGTGGAAATTCTATGATCTATACGCCTCCTACCTCCGTAGGGGATAAAATTGTGGTTATCCCTACCGAAGAGGAAAGACGAAGGCTGTCATATGCTCGAGTATGTGTTGAACTAAATGTAGACTGCCCTATGCTTGCTGAAATAACAGTAAACCTTAGGGGAGAGGATTTCATTGTGACTGTAAATTATGAGTGGAAGCCTCGAAAGTGTAACCTGTGTCGGTCTTTTGGACACTGTAATGATACCTGTCCTAAGATTGTAGAAAACAAAGTCCTTAGAGAGGAAGATGTGAGCAAGGTGGTTCCTAATAAAGGGGAGGAACTGACAAGTGTGGCTTATGGAGATGTAGTGTTGGAGTTCTTTAAACAGTTGGAAGAAGATGAGATTAATAGCAACCCCATAAGGCCTATTAAGGAAAAGGTAGTAGAAAATCGAAATGATTTTACTCTTGTCACTAGGAAGAAAAGGGAGTTGGTTTTTGTACAAGATAAGGGCGAAAGTGTGGAGGTGACTATGCCTAACTCTTTTGGCAGCCTTATGGAGTTGGGTGAAGGAGACAAGTGGGCCTTATCTATAGTGGATGGCTTTCCCCCACCCCAACAG
Coding sequence (CDS)
ATGAACCGCGCATCAGGCATAAGTGAGATTCGTGATTCAGGTTATGTAACAAATGGGCAATTCGTTGATGGGCCTTTAATTGATTATGGACCGACTAAATTGAATGATGGGCCGGCTGGAGTTGATGGGTTGGATACAAAAAATGGAAAAGAAGTCGGTGAAGTTCAGAATTCAAATGGTGGTGTAATGCAGAGAAGAAATCATGGTGAAGGGAATAATTGTCCTAAATCTTCATGGGCTTCCTTATTTGGATCGACAAGTGGAAATTCTATGATCTATACGCCTCCTACCTCCGTAGGGGATAAAATTGTGGTTATCCCTACCGAAGAGGAAAGACGAAGGCTGTCATATGCTCGAGTATGTGTTGAACTAAATGTAGACTGCCCTATGCTTGCTGAAATAACAGTAAACCTTAGGGGAGAGGATTTCATTGTGACTGTAAATTATGAGTGGAAGCCTCGAAAGTGTAACCTGTGTCGGTCTTTTGGACACTGTAATGATACCTGTCCTAAGATTGTAGAAAACAAAGTCCTTAGAGAGGAAGATGTGAGCAAGGTGGTTCCTAATAAAGGGGAGGAACTGACAAGTGTGGCTTATGGAGATGTAGTGTTGGAGTTCTTTAAACAGTTGGAAGAAGATGAGATTAATAGCAACCCCATAAGGCCTATTAAGGAAAAGGTAGTAGAAAATCGAAATGATTTTACTCTTGTCACTAGGAAGAAAAGGGAGTTGGTTTTTGTACAAGATAAGGGCGAAAGTGTGGAGGTGACTATGCCTAACTCTTTTGGCAGCCTTATGGAGTTGGGTGAAGGAGACAAGTGGGCCTTATCTATAGTGGATGGCTTTCCCCCACCCCAACAG
Protein sequence
MNRASGISEIRDSGYVTNGQFVDGPLIDYGPTKLNDGPAGVDGLDTKNGKEVGEVQNSNGGVMQRRNHGEGNNCPKSSWASLFGSTSGNSMIYTPPTSVGDKIVVIPTEEERRRLSYARVCVELNVDCPMLAEITVNLRGEDFIVTVNYEWKPRKCNLCRSFGHCNDTCPKIVENKVLREEDVSKVVPNKGEELTSVAYGDVVLEFFKQLEEDEINSNPIRPIKEKVVENRNDFTLVTRKKRELVFVQDKGESVEVTMPNSFGSLMELGEGDKWALSIVDGFPPPQQ
Homology
BLAST of Chy1G010470 vs. ExPASy TrEMBL
Match:
A0A5A7TVB8 (Putative non-LTR retroelement reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold363G00750 PE=4 SV=1)
HSP 1 Score: 236.1 bits (601), Expect = 1.8e-58
Identity = 121/191 (63.35%), Postives = 149/191 (78.01%), Query Frame = 0
Query: 99 VGDKIVVIPTEEERRRLSYARVCVELNVDCPMLAEITVNLRGEDFIVTVNYEWKPRKCNL 158
VG + + +ERRRLSYARVCVEL+VD M AEITVNLRG DFIV VNY+ KPRKCNL
Sbjct: 83 VGKPLTLDLATKERRRLSYARVCVELDVDSHMPAEITVNLRGVDFIVLVNYKLKPRKCNL 142
Query: 159 CRSFGHCNDTCPKIVENKVLREEDVSKVVPNKGEELTSVAYGDVVLEFFKQLEEDEINSN 218
C +FGH + P+ VE+KVL+EE VSK++P K +EL S G VVLE FKQLE+ EI S+
Sbjct: 143 CWAFGHSSGKYPRSVESKVLQEEVVSKIIPGKRDELDSETCGGVVLESFKQLEDGEIRSS 202
Query: 219 PIRPIK--EKVVENRNDFTLVTRKKRELVFVQDKGESVEVTMPNSFGSLMELGEGDKWAL 278
P RP EK V+ R++FTLVTRKKRELV ++D+G+S+EVTMPNSFGSL ++G+ DKWAL
Sbjct: 203 PNRPSSQVEKEVDKRDEFTLVTRKKRELVSIRDRGKSLEVTMPNSFGSLFKVGDVDKWAL 262
Query: 279 SIVDGFPPPQQ 288
+IV+G PPP Q
Sbjct: 263 TIVEGSPPPSQ 273
BLAST of Chy1G010470 vs. ExPASy TrEMBL
Match:
A0A5D3DXE4 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1467G00020 PE=4 SV=1)
HSP 1 Score: 231.9 bits (590), Expect = 3.4e-57
Identity = 142/312 (45.51%), Postives = 184/312 (58.97%), Query Frame = 0
Query: 18 NGQFVDGPLIDYGPTKLNDGPAGVDGLDTKNGKEVGEVQNSNGGVMQRRNHGEGNNCPKS 77
NGQ GP I+ ++G A G KN Q +N + + +N KS
Sbjct: 142 NGQCDFGPRINSADLMKHEGVA--SGSILKN-------QGANVNNFVENDLNKLSNDSKS 201
Query: 78 SWASLFGSTSGNSMIYTPPTSVGDKIVVIPTEE--------------------------- 137
+WASLFG++S S+ YTPP ++GDKIVVIP EE
Sbjct: 202 TWASLFGTSSEESLFYTPPKAIGDKIVVIPPEEVIDQGIQVWENSLVGQLIDAKLPYAVI 261
Query: 138 -------------ERRRLSYARVCVELNVDCPMLAEITVNLRGEDFIVTVNYEWKPRKCN 197
+RRRLSYARVCVEL M AEITV+LRG DF V+VNYEWKPRKCN
Sbjct: 262 QRLKPISLDFATKKRRRLSYARVCVELEGGSNMSAEITVSLRGVDFNVSVNYEWKPRKCN 321
Query: 198 LCRSFGHCNDTCPKIVENKVLREEDVSKVVPNKGEELTSVAYGDVVLEFFKQLEEDEINS 257
LC +FGH + C + VE+K ++EE V +KG+++ G+VVLE FKQ+E+ EI S
Sbjct: 322 LCCAFGHSSSKCSRSVESKTIQEE-----VVHKGDDVDFELCGEVVLESFKQVEKGEIRS 381
Query: 258 NPIRPIK--EKVVENRNDFTLVTRKKRELVFVQDKGESVEVTMPNSFGSLMELGEGDKWA 288
+P R EK V ++FTLVTRKK ELV ++D+G+S+EV MPNSFGSL+E+G+ DKWA
Sbjct: 382 SPNRHDSQVEKGVGKSDEFTLVTRKKSELVSIRDRGKSMEVIMPNSFGSLLEVGDADKWA 439
BLAST of Chy1G010470 vs. ExPASy TrEMBL
Match:
A0A5A7SPE5 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold581G00620 PE=4 SV=1)
HSP 1 Score: 230.7 bits (587), Expect = 7.6e-57
Identity = 142/312 (45.51%), Postives = 183/312 (58.65%), Query Frame = 0
Query: 18 NGQFVDGPLIDYGPTKLNDGPAGVDGLDTKNGKEVGEVQNSNGGVMQRRNHGEGNNCPKS 77
NGQ GP I+ + G A G KN Q +N + + +N KS
Sbjct: 142 NGQCDFGPRINSADLMKHGGVA--SGSILKN-------QGANVNNFVENDLNKLSNDSKS 201
Query: 78 SWASLFGSTSGNSMIYTPPTSVGDKIVVIPTEE--------------------------- 137
+WASLFG++S S+ YTPP ++GDKIVVIP EE
Sbjct: 202 TWASLFGTSSEESLFYTPPKAIGDKIVVIPPEEVIDQGIQVWENSLVGQLIDAKLPYAVI 261
Query: 138 -------------ERRRLSYARVCVELNVDCPMLAEITVNLRGEDFIVTVNYEWKPRKCN 197
+RRRLSYARVCVEL M AEITV+LRG DF V+VNYEWKPRKCN
Sbjct: 262 QRLKPISLDFATKKRRRLSYARVCVELEGGSNMSAEITVSLRGVDFNVSVNYEWKPRKCN 321
Query: 198 LCRSFGHCNDTCPKIVENKVLREEDVSKVVPNKGEELTSVAYGDVVLEFFKQLEEDEINS 257
LC +FGH + C + VE+K ++EE V +KG+++ G+VVLE FKQ+E+ EI S
Sbjct: 322 LCCAFGHSSSKCSRSVESKTIQEE-----VVHKGDDVDFELCGEVVLESFKQVEKGEIRS 381
Query: 258 NPIRPIK--EKVVENRNDFTLVTRKKRELVFVQDKGESVEVTMPNSFGSLMELGEGDKWA 288
+P R EK V ++FTLVTRKK ELV ++D+G+S+EV MPNSFGSL+E+G+ DKWA
Sbjct: 382 SPNRHDSQVEKGVGKSDEFTLVTRKKSELVSIRDRGKSMEVIMPNSFGSLLEVGDADKWA 439
BLAST of Chy1G010470 vs. ExPASy TrEMBL
Match:
A0A5A7V084 (Exo_endo_phos domain-containing protein/DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00100 PE=4 SV=1)
HSP 1 Score: 223.0 bits (567), Expect = 1.6e-54
Identity = 117/187 (62.57%), Postives = 144/187 (77.01%), Query Frame = 0
Query: 97 TSVGDKIVVIPTEEERRRLSYARVCVELNVDCPMLAEITVNLRGEDFIVTVNYEWKPRKC 156
++VG I + +ERRRLSYARVCV+L+ D M AEITV+LRG DFIV++NYEWKP KC
Sbjct: 215 SAVGKPITLDLATKERRRLSYARVCVKLDGDSHMPAEITVSLRGVDFIVSINYEWKPWKC 274
Query: 157 NLCRSFGHCNDTCPKIVENKVLREEDVSKVVPNKGEELTSVAYGDVVLEFFKQLEEDEIN 216
NLC FGH C + VE+KV++EE VSKV P+KG+ L S G+VVLE FKQLEE EI
Sbjct: 275 NLCCVFGHSGGKCHRNVESKVIQEEVVSKVSPSKGDGLDSEPCGEVVLESFKQLEEGEIR 334
Query: 217 SNPIRPIK--EKVVENRNDFTLVTRKKRELVFVQDKGESVEVTMPNSFGSLMELGEGDKW 276
S+ R EK V R+DFTLVTRKKRELVFV+D+G+S+EVTMPN FGSL+E+G+ DKW
Sbjct: 335 SSRNRHSSQVEKEVGKRDDFTLVTRKKRELVFVRDRGKSLEVTMPNFFGSLLEVGDFDKW 394
Query: 277 ALSIVDG 282
AL+I+DG
Sbjct: 395 ALTIIDG 401
BLAST of Chy1G010470 vs. ExPASy TrEMBL
Match:
A0A5A7V5J2 (Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold387G00210 PE=4 SV=1)
HSP 1 Score: 218.0 bits (554), Expect = 5.1e-53
Identity = 111/191 (58.12%), Postives = 140/191 (73.30%), Query Frame = 0
Query: 99 VGDKIVVIPTEEERRRLSYARVCVELNVDCPMLAEITVNLRGEDFIVTVNYEWKPRKCNL 158
VG I + +E RLSYARVCV+L + M AEITVNLRG DF V+VNYEWKP+KCNL
Sbjct: 83 VGKPITLDLATKEHSRLSYARVCVKLEGEFNMRAEITVNLRGVDFNVSVNYEWKPQKCNL 142
Query: 159 CRSFGHCNDTCPKIVENKVLREEDVSKVVPNKGEELTSVAYGDVVLEFFKQLEEDEINSN 218
C + GH CP+ VE+K+++EE VSK++P KGE + S VVLE FKQLEE EI S+
Sbjct: 143 CCAIGHSGGKCPRSVESKIIQEEVVSKIIPGKGEGVDSEPCAKVVLESFKQLEEGEIRSS 202
Query: 219 PIR--PIKEKVVENRNDFTLVTRKKRELVFVQDKGESVEVTMPNSFGSLMELGEGDKWAL 278
P R EK V R++FTLVTRKK ELV V+D+G+S+ V MPNSFGSL+E+G+ DKWAL
Sbjct: 203 PNRHGSHVEKEVGKRDEFTLVTRKKSELVSVRDRGKSIVVAMPNSFGSLLEVGDVDKWAL 262
Query: 279 SIVDGFPPPQQ 288
++++G PPP Q
Sbjct: 263 TVIEGSPPPLQ 273
BLAST of Chy1G010470 vs. NCBI nr
Match:
KAA0060724.1 (hypothetical protein E6C27_scaffold72G00110 [Cucumis melo var. makuwa] >TYK01466.1 Exo_endo_phos domain-containing protein/DUF4283 domain-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 238 bits (606), Expect = 2.43e-70
Identity = 150/331 (45.32%), Postives = 192/331 (58.01%), Query Frame = 0
Query: 13 SGYVTNGQFVDGPLIDY-------GPTKLNDGPAGVDGLDTKNGKEVGEV-QNSNGGVMQ 72
SG +GQ GPL G ++LN G + T G G + +N + V++
Sbjct: 78 SGLKRDGQHSIGPLFGIEEIGKSGGSSELNSGRP----VSTDQGISFGSISKNLSVNVVE 137
Query: 73 RRNHGEGNNCPKSSWASLFGSTSGNSMIYTPPTSVGDKIVVIPTEE-------------- 132
G+N S+WASLFG++ S+ YT P ++GD I+V+P+EE
Sbjct: 138 NGPKTTGSN---STWASLFGTSPDGSLPYTQPKTIGDNIIVVPSEEVIAQNIRVWENSLV 197
Query: 133 --------------------------------------ERRRLSYARVCVELNVDCPMLA 192
ERRRLSYARVCV+L+ D M A
Sbjct: 198 VPVWIRLGRIPMELWTEAGLAVVASAVGKPITLDLATKERRRLSYARVCVKLDGDSHMPA 257
Query: 193 EITVNLRGEDFIVTVNYEWKPRKCNLCRSFGHCNDTCPKIVENKVLREEDVSKVVPNKGE 252
EITV+LRG DFIV++NYEWKP KCNLC FGH C + VE+KV++EE VSKV P+KG+
Sbjct: 258 EITVSLRGVDFIVSINYEWKPWKCNLCCVFGHSGGKCHRNVESKVIQEEVVSKVSPSKGD 317
Query: 253 ELTSVAYGDVVLEFFKQLEEDEINSNPIRPIK--EKVVENRNDFTLVTRKKRELVFVQDK 281
L S G+VVLE FKQLEE EI S+ R EK V R+DFTLVTRKKRELVFV+D+
Sbjct: 318 GLDSEPCGEVVLESFKQLEEGEIRSSRNRHSSQVEKEVGKRDDFTLVTRKKRELVFVRDR 377
BLAST of Chy1G010470 vs. NCBI nr
Match:
KAA0047412.1 (putative non-LTR retroelement reverse transcriptase [Cucumis melo var. makuwa] >TYK14087.1 putative non-LTR retroelement reverse transcriptase [Cucumis melo var. makuwa])
HSP 1 Score: 234 bits (596), Expect = 6.22e-67
Identity = 121/191 (63.35%), Postives = 149/191 (78.01%), Query Frame = 0
Query: 99 VGDKIVVIPTEEERRRLSYARVCVELNVDCPMLAEITVNLRGEDFIVTVNYEWKPRKCNL 158
VG + + +ERRRLSYARVCVEL+VD M AEITVNLRG DFIV VNY+ KPRKCNL
Sbjct: 83 VGKPLTLDLATKERRRLSYARVCVELDVDSHMPAEITVNLRGVDFIVLVNYKLKPRKCNL 142
Query: 159 CRSFGHCNDTCPKIVENKVLREEDVSKVVPNKGEELTSVAYGDVVLEFFKQLEEDEINSN 218
C +FGH + P+ VE+KVL+EE VSK++P K +EL S G VVLE FKQLE+ EI S+
Sbjct: 143 CWAFGHSSGKYPRSVESKVLQEEVVSKIIPGKRDELDSETCGGVVLESFKQLEDGEIRSS 202
Query: 219 PIRPIK--EKVVENRNDFTLVTRKKRELVFVQDKGESVEVTMPNSFGSLMELGEGDKWAL 278
P RP EK V+ R++FTLVTRKKRELV ++D+G+S+EVTMPNSFGSL ++G+ DKWAL
Sbjct: 203 PNRPSSQVEKEVDKRDEFTLVTRKKRELVSIRDRGKSLEVTMPNSFGSLFKVGDVDKWAL 262
Query: 279 SIVDGFPPPQQ 287
+IV+G PPP Q
Sbjct: 263 TIVEGSPPPSQ 273
BLAST of Chy1G010470 vs. NCBI nr
Match:
TYK28099.1 (uncharacterized protein E5676_scaffold1467G00020 [Cucumis melo var. makuwa])
HSP 1 Score: 230 bits (586), Expect = 2.08e-64
Identity = 129/257 (50.19%), Postives = 164/257 (63.81%), Query Frame = 0
Query: 73 NCPKSSWASLFGSTSGNSMIYTPPTSVGDKIVVIPTEE---------------------- 132
N KS+WASLFG++S S+ YTPP ++GDKIVVIP EE
Sbjct: 188 NDSKSTWASLFGTSSEESLFYTPPKAIGDKIVVIPPEEVIDQGIQVWENSLVGQLIDAKL 247
Query: 133 ------------------ERRRLSYARVCVELNVDCPMLAEITVNLRGEDFIVTVNYEWK 192
+RRRLSYARVCVEL M AEITV+LRG DF V+VNYEWK
Sbjct: 248 PYAVIQRLKPISLDFATKKRRRLSYARVCVELEGGSNMSAEITVSLRGVDFNVSVNYEWK 307
Query: 193 PRKCNLCRSFGHCNDTCPKIVENKVLREEDVSKVVPNKGEELTSVAYGDVVLEFFKQLEE 252
PRKCNLC +FGH + C + VE+K ++EE V +KG+++ G+VVLE FKQ+E+
Sbjct: 308 PRKCNLCCAFGHSSSKCSRSVESKTIQEE-----VVHKGDDVDFELCGEVVLESFKQVEK 367
Query: 253 DEINSNPIRPIK--EKVVENRNDFTLVTRKKRELVFVQDKGESVEVTMPNSFGSLMELGE 287
EI S+P R EK V ++FTLVTRKK ELV ++D+G+S+EV MPNSFGSL+E+G+
Sbjct: 368 GEIRSSPNRHDSQVEKGVGKSDEFTLVTRKKSELVSIRDRGKSMEVIMPNSFGSLLEVGD 427
BLAST of Chy1G010470 vs. NCBI nr
Match:
KAA0026071.1 (uncharacterized protein E6C27_scaffold581G00620 [Cucumis melo var. makuwa])
HSP 1 Score: 230 bits (586), Expect = 2.08e-64
Identity = 129/257 (50.19%), Postives = 164/257 (63.81%), Query Frame = 0
Query: 73 NCPKSSWASLFGSTSGNSMIYTPPTSVGDKIVVIPTEE---------------------- 132
N KS+WASLFG++S S+ YTPP ++GDKIVVIP EE
Sbjct: 188 NDSKSTWASLFGTSSEESLFYTPPKAIGDKIVVIPPEEVIDQGIQVWENSLVGQLIDAKL 247
Query: 133 ------------------ERRRLSYARVCVELNVDCPMLAEITVNLRGEDFIVTVNYEWK 192
+RRRLSYARVCVEL M AEITV+LRG DF V+VNYEWK
Sbjct: 248 PYAVIQRLKPISLDFATKKRRRLSYARVCVELEGGSNMSAEITVSLRGVDFNVSVNYEWK 307
Query: 193 PRKCNLCRSFGHCNDTCPKIVENKVLREEDVSKVVPNKGEELTSVAYGDVVLEFFKQLEE 252
PRKCNLC +FGH + C + VE+K ++EE V +KG+++ G+VVLE FKQ+E+
Sbjct: 308 PRKCNLCCAFGHSSSKCSRSVESKTIQEE-----VVHKGDDVDFELCGEVVLESFKQVEK 367
Query: 253 DEINSNPIRPIK--EKVVENRNDFTLVTRKKRELVFVQDKGESVEVTMPNSFGSLMELGE 287
EI S+P R EK V ++FTLVTRKK ELV ++D+G+S+EV MPNSFGSL+E+G+
Sbjct: 368 GEIRSSPNRHDSQVEKGVGKSDEFTLVTRKKSELVSIRDRGKSMEVIMPNSFGSLLEVGD 427
BLAST of Chy1G010470 vs. NCBI nr
Match:
XP_004142722.2 (uncharacterized protein LOC101204295 [Cucumis sativus])
HSP 1 Score: 213 bits (543), Expect = 2.59e-63
Identity = 114/191 (59.69%), Postives = 137/191 (71.73%), Query Frame = 0
Query: 97 TSVGDKIVVIPTEEERRRLSYARVCVELNVDCPMLAEITVNLRGEDFIVTVNYEWKPRKC 156
+++G + + +ERR+LS+ARVCVELNV+ PMLAEITVNLR DFIVTVNYEWKPRKC
Sbjct: 39 SAIGKHLSLDLATKERRKLSFARVCVELNVESPMLAEITVNLRRVDFIVTVNYEWKPRKC 98
Query: 157 NLCRSFGHCNDTCPKIVENKVLREEDVSKVVPNKGEELTSVAYGDVVLEFFKQLEEDEIN 216
NL R+F HC+ CP+IVENKV EE+V K LEE EIN
Sbjct: 99 NLYRAFRHCSGKCPRIVENKVHHEEEVRK------------------------LEEGEIN 158
Query: 217 SNPIRPIKEKVVENRNDFTLVTRKKRELVFVQDKGESVEVTMPNSFGSLMELGEGDKWAL 276
S+ IRP KEK V N++DFTLV KK ELV+V+ KG+SV+VTMPNSFG+LMELG+GDKWAL
Sbjct: 159 SSLIRPTKEKGVGNQDDFTLVIGKKWELVYVRYKGKSVDVTMPNSFGNLMELGKGDKWAL 205
Query: 277 SIVDGFPPPQQ 287
SIV+G P Q
Sbjct: 219 SIVEGSALPLQ 205
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7TVB8 | 1.8e-58 | 63.35 | Putative non-LTR retroelement reverse transcriptase OS=Cucumis melo var. makuwa ... | [more] |
| A0A5D3DXE4 | 3.4e-57 | 45.51 | Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1... | [more] |
| A0A5A7SPE5 | 7.6e-57 | 45.51 | Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1... | [more] |
| A0A5A7V084 | 1.6e-54 | 62.57 | Exo_endo_phos domain-containing protein/DUF4283 domain-containing protein OS=Cuc... | [more] |
| A0A5A7V5J2 | 5.1e-53 | 58.12 | Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. mak... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAA0060724.1 | 2.43e-70 | 45.32 | hypothetical protein E6C27_scaffold72G00110 [Cucumis melo var. makuwa] >TYK01466... | [more] |
| KAA0047412.1 | 6.22e-67 | 63.35 | putative non-LTR retroelement reverse transcriptase [Cucumis melo var. makuwa] >... | [more] |
| TYK28099.1 | 2.08e-64 | 50.19 | uncharacterized protein E5676_scaffold1467G00020 [Cucumis melo var. makuwa] | [more] |
| KAA0026071.1 | 2.08e-64 | 50.19 | uncharacterized protein E6C27_scaffold581G00620 [Cucumis melo var. makuwa] | [more] |
| XP_004142722.2 | 2.59e-63 | 59.69 | uncharacterized protein LOC101204295 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
