CmaCh06G003630 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G003630
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	DEAD-box ATP-dependent RNA helicase 57
Location	Cma_Chr06: 1678446 .. 1689171 (-)
RNA-Seq Expression	CmaCh06G003630
Synteny	CmaCh06G003630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTTGCTATGGCAAAACATGGTAAATAACAAATCTTCTGGGGAGACATTTATAATTTCGGCAATTTGCAAAAGCAAATAAATAGAGGCGGCAATCTGCAGACATTTGGTACTTGGCCCGCGAAAATTCCATTCGGAATTTCCTATTGCGTCACAAAAGTTCCAATCCATTTGTTAGTTCTGCTCTGAAAATTCATCCCTTTCAATGGCTGACGAGTGCCTGGCTTCTGCAAGAAGAGATCCAATCAAGTCTTCAGGTACGTTCTTTTACTCTATTGACTATCTTTTTAAGGATTGATTGCTATATTTGAATTCATATTGATTTTTTGCTGCTATGAGTTCGAATGTGAAGAAGATTATTGATGCTGTTTCCGCCGACTGAATTTAGTGCTGTTGCGTTCGATATGTTAGCTTGCTTTTTGGATGATTAGTAAAGAAAGAGGAGATTCGAAGTTAATTTATATATAATCCACAAAGAATCAGTCCAGTAGGAGATCGTTTTTGATTTTGAAGAACTTTGTTCGTAACTAATGCTGAGAATGCATTTATATTCTGTTATCAGTTGGGAATGTTGCGGCTCATCGAAGACGGCAGCATGCCCTTACAGTGGGGAAGGAAAGAAGAGAATCGTTGATGCGTGCGAAGCGTATCTGTAGAATTGGGATTGGTGATGTTGCTCTCGAAAATGAAATGATGATGGACGAAGAAGTGTCAATTTTGGAAGTTCAAACTTCTTCAGCAGTGGACGAGCTAAAATCTGCAGTTGCATACCAGTACGTTGGTTTTTTACCTTTGTTTTATCCCCAGATTTAGGAAAAAAATTTCTCTCATGTTTCATATTTGAAATCATACTTGGGTTACCTGTCATGCCACAACTATCTTAACTATCCAGTGGGAAGAATTGCTGTAGGATGAAGAATTTGAGAGCCATGAGGTGCTATTAAGTAGTTTATTTTCGCATAACTACTTGGTGATATTGGATTAATGTAATTAACCATCTAGTTTGTGTGCTTACCTTAACTAGATTATTGCTTCAGAGTTAAATTAAGTACGGCCGCTATCTAGCTTTTTCTGAGGGTTCTCTTGTTTAAAAGAAAAACTGAAGTATTTATACCATCCCTTGAAGGCGATGGGTGCGGTTTCGTTCCTCAATACTTGGAATGGGCACCAAGATGGGGAATCATTTGTAATCGTGACTGGACTCTCAGATATAGAAAGAATGAACTGAATTGTGAAAAGCACATCAAATATTGTCTTGCTTCCACATGCTGTTCATTTGTCTTAAGGAATAGTACAAAAACCTCTTATTGTCCGGATAAGCAAAATGTTGGTTTGAAAAATTATTGAAGGTTGAAATGGACAGCATCGAGGATCGTTTTCATCCCCTTTGTTTTAGGTGAAGGGGAGATGGTTTGATCCTATGGTGAACAATAATGCAGTAAGTGATAAGCATTTCTTAATTCTGTTTGTGGTTTTTAAATGACCCATCCTCCACTACTGCTATTTAAATGACTGATGAATTAAATTGTTGATAAAATTGGTTTTAAGGTCTTGCTGTTTTTTAAATTGTAGGGGAAAAGGTGCAATGCAGAAGAGAATTCATGCCCTTCGTGAGCTAAGACGCTTGTTGTCAAGATCAGAATTCCCTCCAGTTGAAGCCGCTCTTAAAGCAGGAGCAGTATCTCTGTTGGTGCAGTGTCTATCATTCGGTTCCTCTGATGAGCAGGTCAGATATAGCTTGTGCTTGTCTAAGATTGTGCTTTGATTGGTTTGAGTTAAGTGCACTATAGGTCCAACTCATTATGCTCGATATAGTTTTCTCACAAGGCTGTCCAATCATGTCAAGTTGAAAAGGAAATGGAATAAGTGATTCTTTACTTGGTGTATCCTGGACGTGGTCATTGTCGACTGATGGGGTTTTTGGAATCTGATTGTCATTGAATATATGTTCATTGACTGTTGAACTTACATGGCCGATTCAGCACGGATTGCATGGATTGCATGGATTATCTCTATTGGCCTTGTAAAGTACCGGATTGTTTATTGACGAATATTTGTTTTTAAAAACCCTACTTCTATACTGCAGTTGCTTGAAGCAGCCTGGTGCCTAACGAACATTGGAGCTGGGAAGCCTGAGGAGACCAAATCTTTGATGCCAGCGTTACCCTTGCTCATTGCTCATCTTGGAGGTTCACATTACCAATTATTTTCTTTTCCTATTTCTATTGAAAGCTGGCATCTCATATCTTGTTTCCAAATTATGGTTTTCAATTTAGCCGTTTATTTGATTCACTGTAATCTTCCTCTTACAATTACGTGCTGCAAGTATGTTCTCATTATTATGTATGATTATTTGCCCTGCCGTTATATGCATCTGATCACTGGTTGGCCAACGCAACAGGCAGACTTAGTCTGTACTGGCTTGTGTATTTTAACGTATCCGAGGTAGTATCTTAAATTTTGAATATTTACAATGCTATGAAAAATTGGGTTCATTCTTTGCTTTGTCTAGCTTTTATTTCATTTTGACTGTACTTTCTTGTGCAGAAAAAAGTTCTCTGCTTGTTGCAGAACAGTGTGCATGGGCATTGGGAAATGTTGCTGGTGAAGAAATGGAGTTGAGGAATATTCTGCTTTCTCAAGGAGCTTTACTGCCACTTGCAAGAATGCTGTTTCCAAACAAAGGTTCATCTGTTAAAACAGCTGCTTGGGCACTATCCAACTTAATTAAGGTTTTGTGTTTTCTATTACTAGCATTACAAGCCTTCTCTGTGCGCAACTACATGAGGTCATTCACGAAATATGTCCTCTTCTGTTTTCTCATGTAGGGACCGGATTCCAGGGCTGCTACAGAACTCATTAAAATTGATGGGGTGTTGGATGCAATTATTAGACACTTGGGAAAAGCGTAAGTGTTGTTATCAATTTGGGGTTCATATATTTTGATAAAAAAAAAAAAGGATTTAATATAATGATTGATTTGTCCCTCTTTTGTATCTCGACTTATTTGCTCTGTCATTAAGCTGTCTCTGTGCAAAATGATACTGTATCTTCGATGGTTATCTACATTTCTGGAGGATAGTTATCACTAACTTAGGTAGAGATAAGATTTTGGAACATGCAAATTTCCCTTGCAATCATTATAATTGTCTAACTCAAGAGAAGATATCCTGTCTTCAAGACCTTGTTTATATAATGTTAATACTGCTGCTATTTTGTTGTGGAATGTTTCTAAGATTGTTTAGATGGACAGGGCTTTAACTATATTCAAAATTACAAAGTGCAGGGATGATGAGCTGGCAACTGAAGTTGCATGGGTAATTGTGTATCTTTCAGCACTCTCAAATGTTGCTACCAGTATATTGGTGAAGAGCGAGGTTCTCCAACTACTTGTAGAAAGATTATCAACATCAAATAGTTTGCAATTGCTTATTCCGGTAATGTCAAACAATGTCTGTATTCTAAGATTCACTTTTCTGATTACAGGCTAATTTACCGTGCATTATCACGAGATGCCTAACGTACTTTCATGAAGGTGTTAGTTATCTCCTTCTCTCTTTCAATGGCCTAACTTGAGTTGTCCACGACTCCCCCTTTCAAGCTTTTCTTTCCTGATTAATTATGGTTGTAGTCTTAAATTAAAAAAAGATTATGCTTGTAGTTTTGTGAGGTCATTATCAATGAGTCATAATTTGTATTGATTATGTAACATAGTTGCAGACGTTTTCCTTTCCATGTGGTTCTTCTTTAGCATAGAAATGATGTAATTTGCCTGGATCAAGTCAATTGCCTGATGAGAGCTTTATAAATGATTTCATATGTTTCATGGTATGGCTACTAGGAGAATGCTTCCTTATGTTTTCCTCTTCTGAAAAGATTTTGAAGCTGTAGTTGAATTGCTTATTGTTTTCAGATCCACTGTGTAGAGTATACATTAACACTGTCTTCTAGTTGGATATCCTTTGTAGCGATTCAATGTTTTTGATCAATTATTTTGTGGGTTTTTGATTATCTGAAAAATGATGTCTTAAATAGGTGCTTCGAAGTTTGGGCAACCTTCTGGCTGTGGATTCACATACAATTTGTAATGTACTAATTCCTGGACGTGAAATTACAGGCAAGTGGTTTACTTTCTTCTCTTGCTAGGAGGGTATCACAATACTCAGACTCCAATGAACAACAAATGAGGAAATAATGATAGTGACTAGTGAGATTTGAATAGAATACAATTTTTTTTTTCAGGTAGTGTTTTAGAAGTCCTGATAAAATGCTTGAAAAGCGAACACCGAGTTTTGAAGAAGGTATATTTCACTACTTCGTAAAATATTACCATCTCCGCACAGTTTCTGGACTTTTGAGTTTCTCATCTGAATCCCTACCGTAACGTGCAGGAAGCATCTTGGGTACTGTCTAACATTGCTGCGGGCTCGATGGAGCACAAGCAATTGATATATATTAGTGATGCAGTACCCTTGTTAATACGCCTTCTTTCATCGGCACCATTTGATGTACGAAAGGAAGTAGCATATGTACTGGGAAATCTCTGCGCTGCGCCTGATGAAAGTGGTGAAGGAAAACCAAAATTGCTTGTTGAGAACTTGGTTTCTCTTGTTGGCAAAGGATGCCTTCCGGGTTTCATTGACTTGGTAAGATCTGCTGACACGGAGGCTGCAAGGCTAGGATTTCAATTCTTGGAGCTGGTGAGTATATCTGATTGTTCATATACAGTGTTCAAATTGGTATTCTTCTCGTTTGTTATTTGTCACAATTGTTGGGCTTTGCTGGGTTAGAATTAGAAAGCATCTCATCTTTCCCTCGCATAACTAAATCCTGTGTCACCTTTTTCTTCAAACTGAGGACGTTGACCGTCTCTTCTGGGCGGAGCTAGGAAAGAAGGGAAGCATTTGGCACCATAGCTCGTCTCTTTTATATGTGTTTCTTACTATTCTCTTAAGATCCATCTAGTTGGTGGCATCCGTTCAATTGGTGTCCTCGACTAGGTGGTTAGAGATTTGAGTCCTCTCCTCTTTGTTTGGTTATGAACTTTTTACATAAGTTTTTTAAAATGAAAAAAAAAAGTTTCCAAAAACTTATTTTTGTTTTTGTAATTTGAATACAAATGTTTTATGTAAGAGAAATGATGAGAAAACAAACACGATTTTAAAAAACCGAATAGTTATCAAAGGCAGCGTTCATATTGAAGAGGACTTCTAGAAAAGTCCTTGTTCTGCTCCATAATGATCATTCATTTTCTTGTTGTCTATCCAAAGGTATTAAGAGGCATGCCAAATGGGGAGGGCCCAAGGCTGGTTGAGCGGGAGGATGGCATCGAAGCGATGGAGAGATTTCAGTTTCATGAAAACGAAGACTTGAGAAACATGGCAAATCGTCTGGTCGACATGTACTTTGGCGAGGACTACGGTCTCGGTGAGTAGGAAATTTGTGGTTTTTAAGATTTAGGCTCACTGTTTTTGTAATCACAATTATGTACTTGGTCATTATCGAGTGCTTTTCGCTCCATCTATCAGCTACTTTATGAAATCCATCATCCAGGGAGGAAGATGGAATTGAGCTTTGTGTAATATCATCATTTTTTATTTGCAAGTTTTCTGATGAGCTTGACCAGAGCATGTCTTGAAAAGTGTTTATTAGGAGGGAAATGGTTTGCAAAATTGTGTGCAGTTGACATGGGATTTTGAAGTCCCTTGTCATCTCAATTGAACTCTTCTTTTTTCACAATAAGTTATAGAACCGATGGTTTATGGATTCTTCTTGGGTGAGATATATTAAATTTTGACTATACTATTTGAATTTTTTATTTTTGGATTTATATTTTATTTCGAATTTTAAGCTCAAAATTAGTTTTTAACTTGCCTAGTATTATTAGGCTATCATTCAATTAGCTAAAAATCTTCGATCAAGAGTAAGAGGTTTTATAACAAAAGGCTCGTTGTTAGTAGATATTGTCCCCAAATGTATCCACTTGAGAGAGTTTTTTGCACTCTTGTAAAGAATGTTTTGTTGCTCTCCACTTCATGTGTACTCTAAAAAAAAAAATTAATCAATTAATCGATTGGTTGGTTTTGGATCTATTCACTTCAAGTGTACTGTGATGAAAAAAAATTAACATATTGGTTAAAGATAAACATAATCGGTGTGATTAATAAGAAAAAATGTAAAATTATAAAATGTAAAATTTAAAATCTAAAAATATATTAGATATTTAAGAGATTAATCACATTAATTATATTTAATTAAACCAGCAATTTTACGGATAATTCAATTTTGTTGGAACCCTAATTTTGAGTTCTAAGAAAAAAAAAAAAAAGGGAGGGAAAGGTTTTAACTATGAAAGAGGAAGGGTATATTAAAATCCTTAGGGTTTTGGCGCCGACGATCAAATTCACGGCCCTGTTTTTGCTAGGGTTTTGAAGCCGACGATCAAAAGGAGATCATCTAGGTCGGTTGCTGAATTTAGGGATTCAAGTTTCTGGAAGTTTAAAGGAGAACGCAATATTCGTGAGAGACGCAGATTTGTTAGCCCATTGTAATGGAGAAAGGGGCTTCTTTCTTGTTCGCCGGCATTCATTTTGACAAGAAGAGGTTCGCCGCAGATTTTTCTAGGTTCGAGGTAAACGTCTGTAGCTGCGTTGTTGACTGTTTTATTATGAGAAAATTGAAGGATTATGTGAGGTAATTCAACTTTGTCATTTTAACAGGGCAAAAAAGAAAGTGATAATGGAATCGAAGGTTTGAGTTCCATTGCTAATAGTGATTTTGAAGTAATTGAGGATTCAACGCCTTCGGAGAAGAGGAAGAGGAAGAGGAAATCAGCGGCTACGGGTATATTGCCGAATGCTTTGAATTGCTTGTGGCCAATCGCGTCATTGTAAGCCGTTGAGCTTAGTTTTATCACTTTTTTTTTTCTTATGTAGAATCGGTGGAGGGGTTCAGCGTCTTCAGGGATTCAAAACTAACTGTAGCTGCTTCAGTGAATGAGGAAAATCATCCATCTGAAAACGATCCTTCCGAAGAGAGGAAGGAATTTCATCGGAAACTTGAGGTACTAATTACTTCTTTTGTACTTCCATTGTTTCCCTTTGTGAAGTTTGGTTTTAACTTATATACCACTTGGTCTCTGTCCATCGTTCATTCCATATTTCTTCGATGAACATAGAGAGATGCGCTTTACCGGAAGAAGTATAATATTCACGTCTCTGGGAACAATGTTCCATCGCCACTTCAGAATTTTGCAGAGTTGAGCACAAGGTACTAAATTCTATACTAGCTGGATGGTTTTCTGTGTTCATACGTCAATGGTGATTTTTTTTTTTTGTTTTTGCAATTCTAAATATCTTTTCCCCTTATAGGTTCTGATAAGTATGACTGAAGAATGATAATTGTATGCTTTGCTTGCAGATATGAATGCGACCCATACATACTGCATAATCTTGTAGAACTTGGGTTTAAAGAGCCAACACCAATTCAAAGGCAGGCTATTCCAGTCCTCTTATCCGTATGATCTTCCATTACTATCTTACTATGTGGAGTAAACTTCATCTTTCAGGAGTTATGTTCCAATGTATTGAGAAAAAGATAGGATCTATTGTTGTAACCTGATAAGAATTGGGTTTTTAGGTCGACTATTCTGGTAATTTGTTTGGTTTTAGTTGTTTTTTTTTTTTTTTTTTTCTGATCAACGTTTTCCTTTATAGGGCCGTGAATGCTTTGCTTGTGCCCCTACTGGTTCTGGAAAAACCCTGGCTTTTCTGTGCCCTGTGCTTATGAAACTGAAGGTAATAGTCTTCTAAGTGCCATTTTTATATTTCTTGAATGGTGTTCTGTTCTGATCTTAGTTTTTTTTTTTTTTTTTTTTACCAGGATCCATCAAAGGAAGGTATCCGTGCAGTTATACTTTGTCCAACACGAGAATTAGCATCTCAGACAACAAGGGAGTGCAAAAAATTGGCTAAAGGGAAAAAATTCTCTATCAAGTTGGTTACAAAAGAAGTTATTAGACATGCTGATTTCTCAAAGTTCTCATGTGATGTACTCATATCCACTCCACTTAGGTTAAGGCTTGCTATTCGGAAGAAGAAAATTGATCTCAGTAGGTAGGTGTTGACTAGGGGCATCAGCATGTTGTCAATACAAGACCAGCCTAAATATAACTCATCTCTCATACAGGGTTTGTTGTTTTGCAGAGTGGAGCACCTTGTTCTGGACGAATCTGATAAGTTATTTGAGCTTGGCTTGTTAAAACAGATCGATACCATTGTAAAGGCGTGCTCCAATCCTTCAATAGTTCGCTCATTGTTTAGTGCTACTTTACCTGACTTTGTTGAGGATCTTGCTCGCTCAGTAATGCATGATGCTGTTCGGGTTATTGTTGGTAGGAAGTAAGTTCGCTACTATCATGCTCATCCCAAGATCATCGATTCACATGATATTCTTCTATGTTTTGAGAAAATAACTCCCATATTTCTGATACGTCAATAGGAATACCGCTTCTGAAACTGTCAAGCAAAAGTTGGTTTTTGCCGGAAGTGAAGAAGGGAAACTTCTTGCACTTCGTCAAAGTTTTTCGGAGGTTCGTTACATGTAAATTGTAATGTTGAACTTTTTCTTTGAGTAGAAAGTGAAGAGCTTATCTTTCATCGTGAACAAAAGTCCTTCTTAGCATTCATTCATTGCATGAAATGTCAGCCTGGTTCTAATTCCTGTATCCAGTAGGATACTTATCTGACAATCTTTTGACAGTATTTGTTATTTTGATCTTACTAGACAATGCATTGACTTTGTTGCTTTTGTGCTTAACAGAGTTTGAATCCACCAGTACTGATCTTTGTGCAAAGCAAGGAGCGGGCAAAAGATCTTTATGGTGAACTGGCATTTGAGAATATCAAAGTGAATGTCATCCATTCTGACTTATCAGAGATAGAGGTAATCATTTCATCATCATCTGCTAAAATTTAATATTTCATGGCAGTCAAAAGTTGGTCAAAATGCCAAGCATACTATTCGTGCAGTTCTAAATTGGAGTCTGAAACAATAACAATGCCTAACAGCTTTTAATCCTTAGTGACCTTACGTGAAGCCAGAAAATGAAGAACACGATATTATTCGTTGTACTCCTATGTGGGGCCTTGCCCCCCTAAAAGATAGAACATAAAACAAAATACTATTAAGTTTTTTGTCCTTTCACTTCTTTTAGTATGCTAGACCTGAGTTCGTTTAATGAGCAATTGCTGAAAATATGAACTTTCAGATGATTTTTATTTGTTCATCACATATTATATTATTATAAGGGGTCTATACAATGGAACTACCATAGGATGGCCTAGTGATAAAATAGGGCAAGGTAAATAATAAAGGGCTTAGTGAGAATGAGTTCAACTCATGGTAGCCACCTATCTAATATCTTACTAATGACCTTTGCAACCAAATATAGTATGGTCAAGTTATTTTCCTGTGAGAATAGTTTAGGTGCGCGTAAACTGATCTAGACACTCATAGATGTAAACAAAAATCCATTCAAGGGACACGTGGACTAGAAATGTTTCGAGTCTTTCTATGCCTGATATTCTTTCTTGAATGCAGCGGGAAAATGTTGTTTACGACTTCAGAGCTGGAAAAACTTGGGTGTTAATTGCCACTGATGTAATTGCTCGAGGAATGGATTTCAAAGGGGTTAACTGTGTAATCAATTATGACTTTCCAGATTCTGCCTCTGCATACATTCACCGGATTGGTATGTTCCTTAACATTCTTCAGCTTACTTGACAATGAACCTTGTGTTTAATCCTTAAAAAAATGTTGAAAGATTCATACTCTATATGATGTGGCTGAGTCTAATTTGCATCTTTCAACAGGCCGTTCTGGCAGAGCAGGGAGGAGTGGAGAAGCCATTACATTTTATACAGACGAGGACATTCCATTTCTGCGAAATATTGCCAATGTGATGTCAGCTTCAGGCTGTGAAGTTCCATCCTGGATAACTGAGCTTCAGAAAAAGAAGTGGAAAAAACATAGGCCTAAAAGAGATTCAATCTCAAACAAACCAAAGGATGATGGTGACACCGAGCAGCCGAAAAAGAAGTCAAAAAAACGCAGGCCTAAAAGAGATTCGATCGTGACCAAACCAAAGGGCAATGGTGACTCCGAGCTGCAGAAAAAGAAGTCGAAAAAACAGAGGCCTGAAGGAGATCCAATCCGAAACAAACCAAAGGACAAAGGTGACACCGAGCAGCAGAAACAGAAGTTGAAAAAACGCAAGCTTAAAAGAGATTCAATCTCAACCAAACCAAAGGATGATGGTGTCTCCAAACCACAGAAAAAGAAGTCGAAAAAAGCAGAGGAGGCCTGAAAGAGATTCAATCTCAACCAAACCGAAGAACGAAGGTGAAGCCTAATTTAAAATTGCTACCTCTAATCTATTTCACTTCCCAAAACTTAAAATAAAATATGCCTTTAGGAAGTTCTTGTCCAATGATGTGAAAATGTGTCGATTACATCTAAATTTGTCTCTTAGAAGGTGAGGTGCAAAGGTAGAACAACAATTTTATTTTTATTTATTATTATTATTATTATTATTTTTAATAGCTGCAACTCAAATGTAATAGGTCATCTTGTTTGAAGAATTTGATCATTTGTACATGGTCGACTTAAAAACTCCATTGATATTTTTTGGAAGGAATTTTAGGATTTTTGTGTATTTGAATTTTGAAT

mRNA sequence

AGTTGCTATGGCAAAACATGGTAAATAACAAATCTTCTGGGGAGACATTTATAATTTCGGCAATTTGCAAAAGCAAATAAATAGAGGCGGCAATCTGCAGACATTTGGTACTTGGCCCGCGAAAATTCCATTCGGAATTTCCTATTGCGTCACAAAAGTTCCAATCCATTTGTTAGTTCTGCTCTGAAAATTCATCCCTTTCAATGGCTGACGAGTGCCTGGCTTCTGCAAGAAGAGATCCAATCAAGTCTTCAGTTGGGAATGTTGCGGCTCATCGAAGACGGCAGCATGCCCTTACAGTGGGGAAGGAAAGAAGAGAATCGTTGATGCGTGCGAAGCGTATCTGTAGAATTGGGATTGGTGATGTTGCTCTCGAAAATGAAATGATGATGGACGAAGAAGTGTCAATTTTGGAAGTTCAAACTTCTTCAGCAGTGGACGAGCTAAAATCTGCAGTTGCATACCAGGGAAAAGGTGCAATGCAGAAGAGAATTCATGCCCTTCGTGAGCTAAGACGCTTGTTGTCAAGATCAGAATTCCCTCCAGTTGAAGCCGCTCTTAAAGCAGGAGCAGTATCTCTGTTGGTGCAGTGTCTATCATTCGGTTCCTCTGATGAGCAGTTGCTTGAAGCAGCCTGGTGCCTAACGAACATTGGAGCTGGGAAGCCTGAGGAGACCAAATCTTTGATGCCAGCGTTACCCTTGCTCATTGCTCATCTTGGAGAAAAAAGTTCTCTGCTTGTTGCAGAACAGTGTGCATGGGCATTGGGAAATGTTGCTGGTGAAGAAATGGAGTTGAGGAATATTCTGCTTTCTCAAGGAGCTTTACTGCCACTTGCAAGAATGCTGTTTCCAAACAAAGGTTCATCTGTTAAAACAGCTGCTTGGGCACTATCCAACTTAATTAAGGGACCGGATTCCAGGGCTGCTACAGAACTCATTAAAATTGATGGGGTGTTGGATGCAATTATTAGACACTTGGGAAAAGCGGATGATGAGCTGGCAACTGAAGTTGCATGGGTAATTGTGTATCTTTCAGCACTCTCAAATGTTGCTACCAGTATATTGGTGAAGAGCGAGGTTCTCCAACTACTTGTAGAAAGATTATCAACATCAAATAGTTTGCAATTGCTTATTCCGGAAGCATCTTGGGTACTGTCTAACATTGCTGCGGGCTCGATGGAGCACAAGCAATTGATATATATTAGTGATGCAGTACCCTTGTTAATACGCCTTCTTTCATCGGCACCATTTGATGTACGAAAGGAAGTAGCATATGTACTGGGAAATCTCTGCGCTGCGCCTGATGAAAGTGGTGAAGGAAAACCAAAATTGCTTGTTGAGAACTTGGTTTCTCTTGTTGGCAAAGGATGCCTTCCGGGTTTCATTGACTTGGTAAGATCTGCTGACACGGAGGCTGCAAGGCTAGGATTTCAATTCTTGGAGCTGGTATTAAGAGGCATGCCAAATGGGGAGGGCCCAAGGCTGGTTGAGCGGGAGGATGGCATCGAAGCGATGGAGAGATTTCAGTTTCATGAAAACGAAGACTTGAGAAACATGGCAAATCGTCTGGTCGACATGTACTTTGGCGAGGACTACGGTCTCGGGGCTTCTTTCTTGTTCGCCGGCATTCATTTTGACAAGAAGAGGTTCGCCGCAGATTTTTCTAGGTTCGAGGGCAAAAAAGAAAGTGATAATGGAATCGAAGGTTTGAGTTCCATTGCTAATAGTGATTTTGAAGTAATTGAGGATTCAACGCCTTCGGAGAAGAGGAAGAGGAAGAGGAAATCAGCGGCTACGGAATCGGTGGAGGGGTTCAGCGTCTTCAGGGATTCAAAACTAACTGTAGCTGCTTCAGTGAATGAGGAAAATCATCCATCTGAAAACGATCCTTCCGAAGAGAGGAAGGAATTTCATCGGAAACTTGAGAGAGATGCGCTTTACCGGAAGAAGTATAATATTCACGTCTCTGGGAACAATGTTCCATCGCCACTTCAGAATTTTGCAGAGTTGAGCACAAGATATGAATGCGACCCATACATACTGCATAATCTTGTAGAACTTGGGTTTAAAGAGCCAACACCAATTCAAAGGCAGGCTATTCCAGTCCTCTTATCCGGCCGTGAATGCTTTGCTTGTGCCCCTACTGGTTCTGGAAAAACCCTGGCTTTTCTGTGCCCTGTGCTTATGAAACTGAAGGATCCATCAAAGGAAGGTATCCGTGCAGTTATACTTTGTCCAACACGAGAATTAGCATCTCAGACAACAAGGGAGTGCAAAAAATTGGCTAAAGGGAAAAAATTCTCTATCAAGTTGGTTACAAAAGAAGTTATTAGACATGCTGATTTCTCAAAGTTCTCATGTGATGTACTCATATCCACTCCACTTAGGTTAAGGCTTGCTATTCGGAAGAAGAAAATTGATCTCAGTAGAGTGGAGCACCTTGTTCTGGACGAATCTGATAAGTTATTTGAGCTTGGCTTGTTAAAACAGATCGATACCATTGTAAAGGCGTGCTCCAATCCTTCAATAGTTCGCTCATTGTTTAGTGCTACTTTACCTGACTTTGTTGAGGATCTTGCTCGCTCAGTAATGCATGATGCTGTTCGGGTTATTGTTGGTAGGAAGAATACCGCTTCTGAAACTGTCAAGCAAAAGTTGGTTTTTGCCGGAAGTGAAGAAGGGAAACTTCTTGCACTTCGTCAAAGTTTTTCGGAGAGTTTGAATCCACCAGTACTGATCTTTGTGCAAAGCAAGGAGCGGGCAAAAGATCTTTATGGTGAACTGGCATTTGAGAATATCAAAGTGAATGTCATCCATTCTGACTTATCAGAGATAGAGCGGGAAAATGTTGTTTACGACTTCAGAGCTGGAAAAACTTGGGTGTTAATTGCCACTGATGTAATTGCTCGAGGAATGGATTTCAAAGGGGTTAACTGTGTAATCAATTATGACTTTCCAGATTCTGCCTCTGCATACATTCACCGGATTGGCCGTTCTGGCAGAGCAGGGAGGAGTGGAGAAGCCATTACATTTTATACAGACGAGGACATTCCATTTCTGCGAAATATTGCCAATGTGATGTCAGCTTCAGGCTGTGAAGTTCCATCCTGGATAACTGAGCTTCAGAAAAAGAAGTGGAAAAAACATAGGCCTAAAAGAGATTCAATCTCAAACAAACCAAAGGATGATGGTGACACCGAGCAGCCGAAAAAGAAGTCAAAAAAACGCAGGCCTAAAAGAGATTCGATCGTGACCAAACCAAAGGGCAATGGTGACTCCGAGCTGCAGAAAAAGAAGTCGAAAAAACAGAGGCCTGAAGGAGATCCAATCCGAAACAAACCAAAGGACAAAGGTGACACCGAGCAGCAGAAACAGAAGTTGAAAAAACGCAAGCTTAAAAGAGATTCAATCTCAACCAAACCAAAGGATGATGGTGTCTCCAAACCACAGAAAAAGAAGTCGAAAAAAGCAGAGGAGGCCTGAAAGAGATTCAATCTCAACCAAACCGAAGAACGAAGGTGAAGCCTAATTTAAAATTGCTACCTCTAATCTATTTCACTTCCCAAAACTTAAAATAAAATATGCCTTTAGGAAGTTCTTGTCCAATGATGTGAAAATGTGTCGATTACATCTAAATTTGTCTCTTAGAAGGTGAGGTGCAAAGGTAGAACAACAATTTTATTTTTATTTATTATTATTATTATTATTATTTTTAATAGCTGCAACTCAAATGTAATAGGTCATCTTGTTTGAAGAATTTGATCATTTGTACATGGTCGACTTAAAAACTCCATTGATATTTTTTGGAAGGAATTTTAGGATTTTTGTGTATTTGAATTTTGAAT

Coding sequence (CDS)

ATGGCTGACGAGTGCCTGGCTTCTGCAAGAAGAGATCCAATCAAGTCTTCAGTTGGGAATGTTGCGGCTCATCGAAGACGGCAGCATGCCCTTACAGTGGGGAAGGAAAGAAGAGAATCGTTGATGCGTGCGAAGCGTATCTGTAGAATTGGGATTGGTGATGTTGCTCTCGAAAATGAAATGATGATGGACGAAGAAGTGTCAATTTTGGAAGTTCAAACTTCTTCAGCAGTGGACGAGCTAAAATCTGCAGTTGCATACCAGGGAAAAGGTGCAATGCAGAAGAGAATTCATGCCCTTCGTGAGCTAAGACGCTTGTTGTCAAGATCAGAATTCCCTCCAGTTGAAGCCGCTCTTAAAGCAGGAGCAGTATCTCTGTTGGTGCAGTGTCTATCATTCGGTTCCTCTGATGAGCAGTTGCTTGAAGCAGCCTGGTGCCTAACGAACATTGGAGCTGGGAAGCCTGAGGAGACCAAATCTTTGATGCCAGCGTTACCCTTGCTCATTGCTCATCTTGGAGAAAAAAGTTCTCTGCTTGTTGCAGAACAGTGTGCATGGGCATTGGGAAATGTTGCTGGTGAAGAAATGGAGTTGAGGAATATTCTGCTTTCTCAAGGAGCTTTACTGCCACTTGCAAGAATGCTGTTTCCAAACAAAGGTTCATCTGTTAAAACAGCTGCTTGGGCACTATCCAACTTAATTAAGGGACCGGATTCCAGGGCTGCTACAGAACTCATTAAAATTGATGGGGTGTTGGATGCAATTATTAGACACTTGGGAAAAGCGGATGATGAGCTGGCAACTGAAGTTGCATGGGTAATTGTGTATCTTTCAGCACTCTCAAATGTTGCTACCAGTATATTGGTGAAGAGCGAGGTTCTCCAACTACTTGTAGAAAGATTATCAACATCAAATAGTTTGCAATTGCTTATTCCGGAAGCATCTTGGGTACTGTCTAACATTGCTGCGGGCTCGATGGAGCACAAGCAATTGATATATATTAGTGATGCAGTACCCTTGTTAATACGCCTTCTTTCATCGGCACCATTTGATGTACGAAAGGAAGTAGCATATGTACTGGGAAATCTCTGCGCTGCGCCTGATGAAAGTGGTGAAGGAAAACCAAAATTGCTTGTTGAGAACTTGGTTTCTCTTGTTGGCAAAGGATGCCTTCCGGGTTTCATTGACTTGGTAAGATCTGCTGACACGGAGGCTGCAAGGCTAGGATTTCAATTCTTGGAGCTGGTATTAAGAGGCATGCCAAATGGGGAGGGCCCAAGGCTGGTTGAGCGGGAGGATGGCATCGAAGCGATGGAGAGATTTCAGTTTCATGAAAACGAAGACTTGAGAAACATGGCAAATCGTCTGGTCGACATGTACTTTGGCGAGGACTACGGTCTCGGGGCTTCTTTCTTGTTCGCCGGCATTCATTTTGACAAGAAGAGGTTCGCCGCAGATTTTTCTAGGTTCGAGGGCAAAAAAGAAAGTGATAATGGAATCGAAGGTTTGAGTTCCATTGCTAATAGTGATTTTGAAGTAATTGAGGATTCAACGCCTTCGGAGAAGAGGAAGAGGAAGAGGAAATCAGCGGCTACGGAATCGGTGGAGGGGTTCAGCGTCTTCAGGGATTCAAAACTAACTGTAGCTGCTTCAGTGAATGAGGAAAATCATCCATCTGAAAACGATCCTTCCGAAGAGAGGAAGGAATTTCATCGGAAACTTGAGAGAGATGCGCTTTACCGGAAGAAGTATAATATTCACGTCTCTGGGAACAATGTTCCATCGCCACTTCAGAATTTTGCAGAGTTGAGCACAAGATATGAATGCGACCCATACATACTGCATAATCTTGTAGAACTTGGGTTTAAAGAGCCAACACCAATTCAAAGGCAGGCTATTCCAGTCCTCTTATCCGGCCGTGAATGCTTTGCTTGTGCCCCTACTGGTTCTGGAAAAACCCTGGCTTTTCTGTGCCCTGTGCTTATGAAACTGAAGGATCCATCAAAGGAAGGTATCCGTGCAGTTATACTTTGTCCAACACGAGAATTAGCATCTCAGACAACAAGGGAGTGCAAAAAATTGGCTAAAGGGAAAAAATTCTCTATCAAGTTGGTTACAAAAGAAGTTATTAGACATGCTGATTTCTCAAAGTTCTCATGTGATGTACTCATATCCACTCCACTTAGGTTAAGGCTTGCTATTCGGAAGAAGAAAATTGATCTCAGTAGAGTGGAGCACCTTGTTCTGGACGAATCTGATAAGTTATTTGAGCTTGGCTTGTTAAAACAGATCGATACCATTGTAAAGGCGTGCTCCAATCCTTCAATAGTTCGCTCATTGTTTAGTGCTACTTTACCTGACTTTGTTGAGGATCTTGCTCGCTCAGTAATGCATGATGCTGTTCGGGTTATTGTTGGTAGGAAGAATACCGCTTCTGAAACTGTCAAGCAAAAGTTGGTTTTTGCCGGAAGTGAAGAAGGGAAACTTCTTGCACTTCGTCAAAGTTTTTCGGAGAGTTTGAATCCACCAGTACTGATCTTTGTGCAAAGCAAGGAGCGGGCAAAAGATCTTTATGGTGAACTGGCATTTGAGAATATCAAAGTGAATGTCATCCATTCTGACTTATCAGAGATAGAGCGGGAAAATGTTGTTTACGACTTCAGAGCTGGAAAAACTTGGGTGTTAATTGCCACTGATGTAATTGCTCGAGGAATGGATTTCAAAGGGGTTAACTGTGTAATCAATTATGACTTTCCAGATTCTGCCTCTGCATACATTCACCGGATTGGCCGTTCTGGCAGAGCAGGGAGGAGTGGAGAAGCCATTACATTTTATACAGACGAGGACATTCCATTTCTGCGAAATATTGCCAATGTGATGTCAGCTTCAGGCTGTGAAGTTCCATCCTGGATAACTGAGCTTCAGAAAAAGAAGTGGAAAAAACATAGGCCTAAAAGAGATTCAATCTCAAACAAACCAAAGGATGATGGTGACACCGAGCAGCCGAAAAAGAAGTCAAAAAAACGCAGGCCTAAAAGAGATTCGATCGTGACCAAACCAAAGGGCAATGGTGACTCCGAGCTGCAGAAAAAGAAGTCGAAAAAACAGAGGCCTGAAGGAGATCCAATCCGAAACAAACCAAAGGACAAAGGTGACACCGAGCAGCAGAAACAGAAGTTGAAAAAACGCAAGCTTAAAAGAGATTCAATCTCAACCAAACCAAAGGATGATGGTGTCTCCAAACCACAGAAAAAGAAGTCGAAAAAAGCAGAGGAGGCCTGA

Protein sequence

MADECLASARRDPIKSSVGNVAAHRRRQHALTVGKERRESLMRAKRICRIGIGDVALENEMMMDEEVSILEVQTSSAVDELKSAVAYQGKGAMQKRIHALRELRRLLSRSEFPPVEAALKAGAVSLLVQCLSFGSSDEQLLEAAWCLTNIGAGKPEETKSLMPALPLLIAHLGEKSSLLVAEQCAWALGNVAGEEMELRNILLSQGALLPLARMLFPNKGSSVKTAAWALSNLIKGPDSRAATELIKIDGVLDAIIRHLGKADDELATEVAWVIVYLSALSNVATSILVKSEVLQLLVERLSTSNSLQLLIPEASWVLSNIAAGSMEHKQLIYISDAVPLLIRLLSSAPFDVRKEVAYVLGNLCAAPDESGEGKPKLLVENLVSLVGKGCLPGFIDLVRSADTEAARLGFQFLELVLRGMPNGEGPRLVEREDGIEAMERFQFHENEDLRNMANRLVDMYFGEDYGLGASFLFAGIHFDKKRFAADFSRFEGKKESDNGIEGLSSIANSDFEVIEDSTPSEKRKRKRKSAATESVEGFSVFRDSKLTVAASVNEENHPSENDPSEERKEFHRKLERDALYRKKYNIHVSGNNVPSPLQNFAELSTRYECDPYILHNLVELGFKEPTPIQRQAIPVLLSGRECFACAPTGSGKTLAFLCPVLMKLKDPSKEGIRAVILCPTRELASQTTRECKKLAKGKKFSIKLVTKEVIRHADFSKFSCDVLISTPLRLRLAIRKKKIDLSRVEHLVLDESDKLFELGLLKQIDTIVKACSNPSIVRSLFSATLPDFVEDLARSVMHDAVRVIVGRKNTASETVKQKLVFAGSEEGKLLALRQSFSESLNPPVLIFVQSKERAKDLYGELAFENIKVNVIHSDLSEIERENVVYDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTDEDIPFLRNIANVMSASGCEVPSWITELQKKKWKKHRPKRDSISNKPKDDGDTEQPKKKSKKRRPKRDSIVTKPKGNGDSELQKKKSKKQRPEGDPIRNKPKDKGDTEQQKQKLKKRKLKRDSISTKPKDDGVSKPQKKKSKKAEEA

Homology

[Close]

BLAST of CmaCh06G003630 vs. ExPASy Swiss-Prot
Match: Q84TG1 (DEAD-box ATP-dependent RNA helicase 57 OS=Arabidopsis thaliana OX=3702 GN=RH57 PE=2 SV=1)

HSP 1 Score: 726.9 bits (1875), Expect = 3.5e-208
Identity = 372/535 (69.53%), Postives = 436/535 (81.50%), Query Frame = 0


Query: 471  FLFAGIHFDKKRFAADFSRFEGKKESDNGIEGLSSIANSDFEVIEDSTPS---EKRKRKR 530
            FLF G +F+KK+FA DF++F+   E D+  + ++     + +  +          +KRKR
Sbjct: 7    FLFGGTNFNKKKFAPDFAKFKNSTEDDDSNKKVNFFVEEEEDTEQPEAEKVIVSSKKRKR 66

Query: 531  KSAATESVEGFSVFRDSKLTVAASVNEENHPSENDPSEERKEFHRKLERDALYRKKYNIH 590
            +S+ +  VEGF VF+ SK   A    EE           +KE +R++ERDAL RK+Y+IH
Sbjct: 67   RSSNSVPVEGFDVFKSSKKARAKGKAEEQITKNEIVENPKKELNRQMERDALSRKQYSIH 126

Query: 591  VSGNNVPSPLQNFAELSTRYECDPYILHNLVELGFKEPTPIQRQAIPVLLSGRECFACAP 650
            VSGNN+P PL++FAELS+RY C+ YIL NL ELGFKEPTPIQRQAIP+LLSGRECFACAP
Sbjct: 127  VSGNNIPPPLKSFAELSSRYGCEGYILRNLAELGFKEPTPIQRQAIPILLSGRECFACAP 186

Query: 651  TGSGKTLAFLCPVLMKLKDPSKEGIRAVILCPTRELASQTTRECKKLAKGKKFSIKLVTK 710
            TGSGKT AF+CP+L+KLK PS +GIRAVIL P RELA+QT RE KKL KG  F I+L+TK
Sbjct: 187  TGSGKTFAFICPMLIKLKRPSTDGIRAVILSPARELAAQTAREGKKLIKGSNFHIRLMTK 246

Query: 711  EVIRHADFSKFSCDVLISTPLRLRLAIRKKKIDLSRVEHLVLDESDKLFELGLLKQIDTI 770
             +++ ADFSK  CDVLISTP+RL+ AI+ KKIDLS+VE+LVLDESDKLFE  LLKQID +
Sbjct: 247  PLVKTADFSKLWCDVLISTPMRLKRAIKAKKIDLSKVEYLVLDESDKLFEQSLLKQIDCV 306

Query: 771  VKACSNPSIVRSLFSATLPDFVEDLARSVMHDAVRVIVGRKNTASETVKQKLVFAGSEEG 830
            VKACSNPSI+RSLFSATLPD VE+LARS+MHDAVRVI+GRKNTASETVKQKLVFAGSEEG
Sbjct: 307  VKACSNPSIIRSLFSATLPDSVEELARSIMHDAVRVIIGRKNTASETVKQKLVFAGSEEG 366

Query: 831  KLLALRQSFSESLNPPVLIFVQSKERAKDLYGELAFENIKVNVIHSDLSEIERENVVYDF 890
            KLLALRQSF+ESLNPPVLIFVQSKERAK+LY EL  ENI+  VIHSDL   EREN V  F
Sbjct: 367  KLLALRQSFAESLNPPVLIFVQSKERAKELYDELKCENIRAGVIHSDLPPGERENAVDQF 426

Query: 891  RAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTD 950
            RAG+ WVLIATDVIARGMDFKG+NCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYT+
Sbjct: 427  RAGEKWVLIATDVIARGMDFKGINCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTE 486

Query: 951  EDIPFLRNIANVMSASGCEVPSWITELQKKKWKKHRPKRDSISNKPK-DDGDTEQ 1002
            +D+PFLRNIAN M +SGCEVPSWI  L+KKKW+KHRP+RDSIS KPK D  DT++
Sbjct: 487  QDVPFLRNIANTMMSSGCEVPSWIMSLKKKKWRKHRPRRDSISTKPKADKNDTDE 541

[Close]

BLAST of CmaCh06G003630 vs. ExPASy Swiss-Prot
Match: Q5K5B6 (DEAD-box ATP-dependent RNA helicase 57 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0647900 PE=2 SV=2)

HSP 1 Score: 678.3 bits (1749), Expect = 1.4e-193
Identity = 354/551 (64.25%), Postives = 433/551 (78.58%), Query Frame = 0


Query: 469 ASFLFAGIHFDKKRFAADFSRF-EGKKESDNGIEGLSSIANSDFEVIEDSTPSEKRKRKR 528
           +S LFAG HFD+KRFA DF+RF +G    D               V   + PS ++KRKR
Sbjct: 7   SSALFAGTHFDRKRFAGDFARFRQGPPAPD---------------VASAAAPSPEKKRKR 66

Query: 529 KS----------------AATESVEGFSVFRDSKLTVAASVNEENHPSENDPSEE----- 588
           +S                +A+++VEGFSVF+   L      ++     E   SE+     
Sbjct: 67  QSKAKAKKSKKRRAEGADSASDAVEGFSVFKG--LAAKKDEDDSEKKVETGKSEDSEVVR 126

Query: 589 -RKEFHRKLERDALYRKKYNIHVSGNNVPSPLQNFAELSTRYECDPYILHNLVELGFKEP 648
            RKE  R++ER A+ RKK++IH+SG NVP+PL+NF EL +RY CD Y++ NL +LGF+EP
Sbjct: 127 RRKEVEREIERAAILRKKFDIHISGQNVPAPLENFEELVSRYGCDSYLVGNLSKLGFQEP 186

Query: 649 TPIQRQAIPVLLSGRECFACAPTGSGKTLAFLCPVLMKLKDPSKEGIRAVILCPTRELAS 708
           TPIQRQAIP+LLSGRECFACAPTGSGKTLAFL P+LMK+K  SKEG++AVILCPTRELA+
Sbjct: 187 TPIQRQAIPILLSGRECFACAPTGSGKTLAFLFPILMKIKPGSKEGVKAVILCPTRELAA 246

Query: 709 QTTRECKKLAKGKKFSIKLVTKEVIRHADFSKFSCDVLISTPLRLRLAIRKKKIDLSRVE 768
           QTTRECKKLAKG+KF IKL+TK++ +  +F    CD+LISTPLRL  A++K+ +DLSRVE
Sbjct: 247 QTTRECKKLAKGRKFYIKLMTKDLSKSGNFKDMHCDILISTPLRLDHAVQKRDLDLSRVE 306

Query: 769 HLVLDESDKLFELGLLKQIDTIVKACSNPSIVRSLFSATLPDFVEDLARSVMHDAVRVIV 828
           +LVLDESDKLFELG ++ ID++VKACSNPSI+RSLFSATLPD +E LAR++MHDAVRVIV
Sbjct: 307 YLVLDESDKLFELGFVEVIDSVVKACSNPSIIRSLFSATLPDSIETLARTIMHDAVRVIV 366

Query: 829 GRKNTASETVKQKLVFAGSEEGKLLALRQSFSESLNPPVLIFVQSKERAKDLYGELAFEN 888
           GRKN+AS  +KQKL+FAG+E+GKLLALRQSF+ESLNPPVLIFVQSKERAK+LY ELAF++
Sbjct: 367 GRKNSASSLIKQKLIFAGTEKGKLLALRQSFAESLNPPVLIFVQSKERAKELYKELAFDD 426

Query: 889 IKVNVIHSDLSEIERENVVYDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSASAY 948
           ++ +VIH+DL E +R++ V + RAGKTWVLIAT+VIARGMDFKGVNCVINYDFP+SASAY
Sbjct: 427 VRADVIHADLDEEQRQDAVDNLRAGKTWVLIATEVIARGMDFKGVNCVINYDFPESASAY 486

Query: 949 IHRIGRSGRAGRSGEAITFYTDEDIPFLRNIANVMSASGCEVPSWITELQKKKWKKHRPK 997
           IHRIGRSGRAGRSGEAITF+T+ED PFLRNIANV+ +SGCEVPSWI  L K K KKHR  
Sbjct: 487 IHRIGRSGRAGRSGEAITFFTEEDKPFLRNIANVLISSGCEVPSWIKALPKLKRKKHRVN 540

[Close]

BLAST of CmaCh06G003630 vs. ExPASy Swiss-Prot
Match: F4KF65 (Importin subunit alpha-9 OS=Arabidopsis thaliana OX=3702 GN=IMPA9 PE=3 SV=1)

HSP 1 Score: 662.9 bits (1709), Expect = 6.2e-189
Identity = 348/518 (67.18%), Postives = 416/518 (80.31%), Query Frame = 0


Query: 1   MADECLASARRDPIKSSVGNVAAHRRRQHALTVGKERRESLMRAKRICRIG----IGDVA 60
           MAD+  AS RRDPIKSSVGNVA  RRR+ A+TV KERRE L+RAKR+CR+G    + D  
Sbjct: 1   MADDGSASNRRDPIKSSVGNVAGQRRRKQAVTVAKERRELLVRAKRLCRVGTNGDVEDAL 60

Query: 61  LENEMMMDEEVSILEVQTSSAVDELKSAVAYQGKGAMQKRIHALRELRRLLSRSEFPPVE 120
           +ENEMM+DEE  ILE Q S +V+ELKSAV YQGKGAMQKR+ ALRELRRLLS+SEFPPVE
Sbjct: 61  VENEMMVDEEQPILEAQASKSVEELKSAVQYQGKGAMQKRVTALRELRRLLSKSEFPPVE 120

Query: 121 AALKAGAVSLLVQCLSFGSSDEQLLEAAWCLTNIGAGKPEETKSLMPALPLLIAHLGEKS 180
           AAL+AGA+ LLVQCLSFGS DEQLLE+AWCLTNI AGKPEETK+L+PALPLLIAHLGEKS
Sbjct: 121 AALRAGAIPLLVQCLSFGSPDEQLLESAWCLTNIAAGKPEETKALLPALPLLIAHLGEKS 180

Query: 181 SLLVAEQCAWALGNVAGEEMELRNILLSQGALLPLARMLFPNKGSSVKTAAWALSNLIKG 240
           S  VAEQCAWA+GNVAGE  +LRN+LLSQGAL PLARM+FP+KGS+V+TAAWALSNLIKG
Sbjct: 181 SAPVAEQCAWAIGNVAGEGEDLRNVLLSQGALPPLARMIFPDKGSTVRTAAWALSNLIKG 240

Query: 241 PDSRAATELIKIDGVLDAIIRHLGKADDELATEVAWVIVYLSALSNVATSILVKSEVLQL 300
           P+S+AA +L+KIDG+LDAI+RHL K D+E ATE+AW+IVYLSALS++ATS+L+K  +LQL
Sbjct: 241 PESKAAAQLVKIDGILDAILRHLKKTDEETATEIAWIIVYLSALSDIATSMLLKGGILQL 300

Query: 301 LVERLSTSNSLQLLIP-------------------------------------------- 360
           L++RL+TS+SLQLLIP                                            
Sbjct: 301 LIDRLATSSSLQLLIPVLRSLGNFVAVDPKAVLTILIREQNTEESIIGVLAKCLRSEHRV 360

Query: 361 ---EASWVLSNIAAGSMEHKQLIYISDAVPLLIRLLSSAPFDVRKEVAYVLGNLCAAPDE 420
              EA+WVLSNIAAGS+EHK++I+ ++ +PLL+R+LS++PFD+RKEVAYVLGNLC    E
Sbjct: 361 LKKEAAWVLSNIAAGSIEHKRMIHSTEVMPLLLRILSTSPFDIRKEVAYVLGNLCVESAE 420

Query: 421 SGEGKPKLLVENLVSLVGKGCLPGFIDLVRSADTEAARLGFQFLELVLRGMPNGEGPRLV 468
            G+ KP+++ E+LVS+V  GCL GFI+LVRS D EAARLG QF+ELVLRGMPNGEGP+LV
Sbjct: 421 -GDRKPRIIQEHLVSIVSGGCLRGFIELVRSPDIEAARLGLQFIELVLRGMPNGEGPKLV 480

[Close]

BLAST of CmaCh06G003630 vs. ExPASy Swiss-Prot
Match: Q9FYP9 (Importin subunit alpha-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0158000 PE=2 SV=1)

HSP 1 Score: 570.9 bits (1470), Expect = 3.2e-161
Identity = 313/508 (61.61%), Postives = 378/508 (74.41%), Query Frame = 0


Query: 11  RDPIKSSVGNVAAHRRRQHALTVGKERRESLMRAKRICRIGI--GDVA--LENEMMMDEE 70
           R+ +KSSV N AA RRR+ A+ +GKERRE+L+RAKR+CR  I   D A   E +M++DEE
Sbjct: 20  REALKSSVRNTAASRRREQAIAIGKERREALIRAKRVCRAPISGSDEAEMEEGDMVVDEE 79

Query: 71  VSILEVQTSSAVDELKSAVAYQGKGAMQKRIHALRELRRLLSRSEFPPVEAALKAGAVSL 130
            + LE +T+ AV+ELKSA++ QGKG  +K+I ALR+LRRLLS+ E P V+ A+KAGAV L
Sbjct: 80  KACLEAKTAHAVEELKSALSIQGKGVQKKKIEALRDLRRLLSQPEVPLVDTAIKAGAVPL 139

Query: 131 LVQCLSFGSSDEQLLEAAWCLTNIGAGKPEETKSLMPALPLLIAHLGEKSSLLVAEQCAW 190
           LVQ LSFGSSDEQLLEAAWCLTNI AG+PEETKSL+PALPLLIAHLGEKSS LVAEQCAW
Sbjct: 140 LVQYLSFGSSDEQLLEAAWCLTNIAAGEPEETKSLLPALPLLIAHLGEKSSTLVAEQCAW 199

Query: 191 ALGNVAGEEMELRNILLSQGALLPLARMLFPNKGSSVKTAAWALSNLIKGPDSRAATELI 250
           A+GNVAGE  ELR+ LL+QGAL PL R++F +KGS+ +TAAWA+SNLIKGPD +AA ELI
Sbjct: 200 AIGNVAGEGAELRSTLLAQGALRPLTRLMFSSKGSTARTAAWAMSNLIKGPDPKAANELI 259

Query: 251 KIDGVLDAIIRHLGKADDELATEVAWVIVYLSALSNVATSILVKSEVLQLLVERLSTSNS 310
            IDGVL+AII  L K D+ELATEVAWV+VYLSALS+   S++V+S V QLL+ RL +S +
Sbjct: 260 TIDGVLNAIIASLEKEDEELATEVAWVVVYLSALSDRGISLIVRSSVPQLLIGRLFSSEN 319

Query: 311 LQLLIP-----------------------------------------------EASWVLS 370
           LQLLIP                                               E+SW LS
Sbjct: 320 LQLLIPVLRGLGNLIAADDYMVDSVLTVGHNIIDQALSGLIKCLKSDNRVLRKESSWALS 379

Query: 371 NIAAGSMEHKQLIYISDAVPLLIRLLSSAPFDVRKEVAYVLGNLCAAPDESGEGKPKLLV 430
           NIAAGS EHK+LI+ S+A P+LIRL++S  FD+R+E AY LGNLC  P  + E  PK++V
Sbjct: 380 NIAAGSFEHKKLIFASEATPVLIRLVTSMQFDIRREAAYTLGNLCVVPTGNCE-LPKIIV 439

Query: 431 ENLVSLVGKGCLPGFIDLVRSADTEAARLGFQFLELVLRGMPNGEGPRLVEREDGIEAME 468
           E+LV++V  G LPGFI LVRSAD + A LG QFLELV+RG PN +GP+LVE EDGIEAME
Sbjct: 440 EHLVAIVDGGALPGFIHLVRSADVDTAGLGLQFLELVMRGYPNKQGPKLVEMEDGIEAME 499

[Close]

BLAST of CmaCh06G003630 vs. ExPASy Swiss-Prot
Match: Q99PT0 (Probable ATP-dependent RNA helicase DDX52 OS=Rattus norvegicus OX=10116 GN=Ddx52 PE=2 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 1.1e-116
Identity = 251/589 (42.61%), Postives = 365/589 (61.97%), Query Frame = 0


Query: 472  LFAGIHFDKKRFAADFSRFE-GKK----ESDNGIEGLSSIAN------------------ 531
            L AG  FD KRF+AD +RF+ GK+    +S   ++GL    N                  
Sbjct: 10   LGAGAKFDVKRFSADATRFQVGKRKFGSDSSETVKGLDFFGNKKSVSDECGGLQTQQELQ 69

Query: 532  ----SDFEVIEDSTPSEKRKRKRKSAATESVEGFSVFRDSKLTVAASVNEENHPSENDPS 591
                ++  ++E S   +K+KRK+ +A   + E          +V A + ++    E   +
Sbjct: 70   NEETTEGGLLERSKEPKKKKRKKMTADVPAQEDLDGTIQWTSSVEAKLQDKKANGEKKLT 129

Query: 592  EERKEFHRKLERDALYRKKYNIHVSGNNVPSPLQNFAELSTRYECDPYILHNLVELGFKE 651
             E+ E H + E+   +R K+ IHV G ++P P+  F +L   Y+  P +L N+++ GF+ 
Sbjct: 130  SEKLE-HLRKEKINFFRNKHKIHVQGTDLPDPIATFQQLDQEYKISPRLLQNILDAGFQV 189

Query: 652  PTPIQRQAIPVLLSGRECFACAPTGSGKTLAFLCPVLMKLKDPSKEGIRAVILCPTRELA 711
            PTPIQ QAIPV+L GRE  A APTGSGKTLAF  P+LM+LK P+ +G RA+++ PTRELA
Sbjct: 190  PTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALVISPTRELA 249

Query: 712  SQTTRECKKLAKGKKFSIKLVTKEVIRHADF---SKFSCDVLISTPLRLRLAIRKKK--I 771
            SQ  RE  K+++G  F I ++ K  I    F   S    D+L++TP RL   ++++   I
Sbjct: 250  SQIHRELIKISEGTGFRIHMIHKAAIAAKKFGPKSSKKFDILVTTPNRLIYLLKQEPPGI 309

Query: 772  DLSRVEHLVLDESDKLFE---LGLLKQIDTIVKACSNPSIVRSLFSATLPDFVEDLARSV 831
            DL+ VE LV+DESDKLFE    G   Q+ +I  AC++P + R++FSAT    VE   +  
Sbjct: 310  DLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSPKVRRAMFSATFAYDVEQWCKLN 369

Query: 832  MHDAVRVIVGRKNTASETVKQKLVFAGSEEGKLLALRQSFSESLNPPVLIFVQSKERAKD 891
            + + V V +G +N+A ETV+Q+L+F GSE GKLLA+R+   +  NPPVL+FVQS ERAK+
Sbjct: 370  LDNIVSVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERAKE 429

Query: 892  LYGELAFENIKVNVIHSDLSEIERENVVYDFRAGKTWVLIATDVIARGMDFKGVNCVINY 951
            L+ EL +E I V+VIH++ ++ +R+N V+ FRAGK WVLI T ++ARG+DFKGVN VINY
Sbjct: 430  LFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVINY 489

Query: 952  DFPDSASAYIHRIGRSGRAGRSGEAITFYTDEDIPFLRNIANVMSASGCEVPSWI----- 1011
            DFP S+  YIHRIGR+GRAG  G+A+TF+T++D P LR++ANV+  +GC VP +I     
Sbjct: 490  DFPTSSVEYIHRIGRTGRAGNRGKAVTFFTEDDKPLLRSVANVIQQAGCPVPEYIKGFQK 549

Query: 1012 -TELQKKKWKKHRPKRDSISNKPKDDGDTEQPKKKSKKRRPKRDSIVTK 1020
                QKKK  K   +R+SIS  PK   +  + KK + +   K++++  K
Sbjct: 550  LLSKQKKKMIKKPLERESISTTPKYFLEQAKQKKVAGQNSKKKETLKGK 597

[Close]

BLAST of CmaCh06G003630 vs. ExPASy TrEMBL
Match: A0A498IET9 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_004588 PE=4 SV=1)

HSP 1 Score: 1394.8 bits (3609), Expect = 0.0e+00
Identity = 734/1005 (73.03%), Postives = 848/1005 (84.38%), Query Frame = 0


Query: 6   LASARRDPIKSSVGNVAAHRRRQHALTVGKERRESLMRAKRICRIGI---GDVALENEMM 65
           +AS RRDPIKSSV NVA  RRRQ A++VGKERRE L+RAKR+CR+GI    D  +E+EM+
Sbjct: 1   MASHRRDPIKSSVANVAGQRRRQQAVSVGKERRELLVRAKRLCRVGISGDSDDTVESEMI 60

Query: 66  MDEEVSILEVQTSSAVDELKSAVAYQGKGAMQKRIHALRELRRLLSRSEFPPVEAALKAG 125
           +DEE SILE QTSSAV+ LK+AVAYQGKGA++KR+ ALRELRRLLSRSEFPPVEAALKAG
Sbjct: 61  IDEEQSILEAQTSSAVEGLKTAVAYQGKGALEKRVSALRELRRLLSRSEFPPVEAALKAG 120

Query: 126 AVSLLVQCLSFGSSDEQLLEAAWCLTNIGAGKPEETKSLMPALPLLIAHLGEKSSLLVAE 185
            + LLVQCLSFGS DEQLLEAAWCLTNI AGKPEETK+L+PALPLLIAHLGEKSSL VAE
Sbjct: 121 VIPLLVQCLSFGSPDEQLLEAAWCLTNIAAGKPEETKALLPALPLLIAHLGEKSSLPVAE 180

Query: 186 QCAWALGNVAGEEMELRNILLSQGALLPLARMLFPNKGSSVKTAAWALSNLIKGPDSRAA 245
           QCAWALGNVAGE  ELR+ILLSQGALLPLARM+ PNKGS+V+TAAWALSNLIKGP+ +A 
Sbjct: 181 QCAWALGNVAGEGEELRSILLSQGALLPLARMMLPNKGSTVRTAAWALSNLIKGPNPKAT 240

Query: 246 TELIKIDGVLDAIIRHLGKADDELATEVAWVIVYLSALSNVATSILVKSEVLQLLVERLS 305
           TELI++DGVLDA+IRHL K+DDELATEVAWV+VYLSALSN+AT +LVKS+VLQLLVERL+
Sbjct: 241 TELIRVDGVLDALIRHLRKSDDELATEVAWVVVYLSALSNLATGMLVKSDVLQLLVERLA 300

Query: 306 TSNSLQLLIPEASWVLSNIAAGSMEHKQLIYISDAVPLLIRLLSSAPFDVRKEVAYVLGN 365
           TSNSLQLLIPEA+WVLSNIAAGS+EHKQLIY S+AV +L+RLLS+APFD+RKEVAYVLGN
Sbjct: 301 TSNSLQLLIPEAAWVLSNIAAGSVEHKQLIYSSEAVLVLLRLLSTAPFDIRKEVAYVLGN 360

Query: 366 LCAAPDESGE--GKPKLLVENLVSLVGKGCLPGFIDLVRSADTEAARLGFQFLELVLRGM 425
           LC  P    E  GKP  ++E+LVSLVG+GCL GFIDLV S DTEAARLG QF EL  RG 
Sbjct: 361 LCVLPISPTERDGKPNFILEHLVSLVGRGCLAGFIDLVNSVDTEAARLGLQFTELDSRGR 420

Query: 426 P-NGEGPRLVEREDGIEAMERFQFHENEDLRNMANRLVDMYFGEDYGLGASFLFAGIHFD 485
              G   RL+      + +     H  +        +++         G SFLFAG++F+
Sbjct: 421 AIRGFNERLINP----QIVTELSLHLGQFAACHPPPIMEE--------GTSFLFAGVNFN 480

Query: 486 KKRFAADFSRFEGKK-ESDNGIE--GLSSIANSDFEVIEDSTPSEKR-----KRKRKSAA 545
           +K+F+ DFSRF+ K  ES+  +E   L  I  S  E +      E R     KRKRK   
Sbjct: 481 RKKFSRDFSRFQKKNIESEKVVEESSLFGITESATEQVAAEEEEEVRAVPVKKRKRKGEV 540

Query: 546 TESVEGFSVFRDSKLTVAASVNEENHPSENDPSEERKEFHRKLERDALYRKKYNIHVSGN 605
           +E VEG SVF+ SK+  AA   +E     N+ SE++KE +R+LERD+L RKKYNIHVSGN
Sbjct: 541 SEGVEGISVFKTSKMAKAAKAEKEK--PGNELSEQKKELNRQLERDSLLRKKYNIHVSGN 600

Query: 606 NVPSPLQNFAELSTRYECDPYILHNLVELGFKEPTPIQRQAIPVLLSGRECFACAPTGSG 665
           N+PSPL +FA+L++RY C+PY+L NL ELGFKEPTPIQRQAIPVLLS RECFACAPTGSG
Sbjct: 601 NIPSPLDSFADLTSRYGCEPYLLQNLAELGFKEPTPIQRQAIPVLLSSRECFACAPTGSG 660

Query: 666 KTLAFLCPVLMKLKDPSKEGIRAVILCPTRELASQTTRECKKLAKGKKFSIKLVTKEVIR 725
           KTLAF+CP+LMKLK  SK+GIRAVILCPTRELA+QTTRECKK+AKG KF IKL+TK++ R
Sbjct: 661 KTLAFVCPMLMKLKHTSKDGIRAVILCPTRELAAQTTRECKKMAKGNKFYIKLMTKDLAR 720

Query: 726 HADFSKFSCDVLISTPLRLRLAIRKKKIDLSRVEHLVLDESDKLFELGLLKQIDTIVKAC 785
           +ADFSK  CD+LISTPLRLRLAIRKKK+DLSRVE+LVLDESDKLFELGLLKQID++VKAC
Sbjct: 721 NADFSKIRCDILISTPLRLRLAIRKKKVDLSRVEYLVLDESDKLFELGLLKQIDSVVKAC 780

Query: 786 SNPSIVRSLFSATLPDFVEDLARSVMHDAVRVIVGRKNTASETVKQKLVFAGSEEGKLLA 845
           SNPSI+RSLFSATLPDFVE+LAR++MHDAVRVI+GRKNTASET+KQKLVFAGSEEGKLLA
Sbjct: 781 SNPSIIRSLFSATLPDFVEELARTIMHDAVRVIIGRKNTASETIKQKLVFAGSEEGKLLA 840

Query: 846 LRQSFSESLNPPVLIFVQSKERAKDLYGELAFENIKVNVIHSDLSEIERENVVYDFRAGK 905
           LRQSF ESLNPPVLIFVQSKERAK+LYGEL FENI+V  IHSD+S+ +REN V DFRAGK
Sbjct: 841 LRQSFKESLNPPVLIFVQSKERAKELYGELLFENIRVGAIHSDMSQAQRENAVDDFRAGK 900

Query: 906 TWVLIATDVIARGMDFKGVNCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTDEDIP 965
           TWVL+ATDVIARGMDFKGVNCVINYDFPDSA+AYIHRIGR GRAGRSGEAITFYT+EDIP
Sbjct: 901 TWVLLATDVIARGMDFKGVNCVINYDFPDSAAAYIHRIGRCGRAGRSGEAITFYTEEDIP 960

Query: 966 FLRNIANVMSASGCEVPSWITELQKKKWKKHRPKRDSISNKPKDD 997
           +L+NIANVMS SGCEVPSWI  L+K+KWKKHRP+R+SIS +PKD+
Sbjct: 961 YLKNIANVMSTSGCEVPSWIMALRKQKWKKHRPRRESISTQPKDE 991

[Close]

BLAST of CmaCh06G003630 vs. ExPASy TrEMBL
Match: A0A6J1KU60 (DEAD-box ATP-dependent RNA helicase 57 OS=Cucurbita maxima OX=3661 GN=LOC111498695 PE=4 SV=1)

HSP 1 Score: 1198.7 bits (3100), Expect = 0.0e+00
Identity = 626/626 (100.00%), Postives = 626/626 (100.00%), Query Frame = 0


Query: 468  GASFLFAGIHFDKKRFAADFSRFEGKKESDNGIEGLSSIANSDFEVIEDSTPSEKRKRKR 527
            GASFLFAGIHFDKKRFAADFSRFEGKKESDNGIEGLSSIANSDFEVIEDSTPSEKRKRKR
Sbjct: 4    GASFLFAGIHFDKKRFAADFSRFEGKKESDNGIEGLSSIANSDFEVIEDSTPSEKRKRKR 63

Query: 528  KSAATESVEGFSVFRDSKLTVAASVNEENHPSENDPSEERKEFHRKLERDALYRKKYNIH 587
            KSAATESVEGFSVFRDSKLTVAASVNEENHPSENDPSEERKEFHRKLERDALYRKKYNIH
Sbjct: 64   KSAATESVEGFSVFRDSKLTVAASVNEENHPSENDPSEERKEFHRKLERDALYRKKYNIH 123

Query: 588  VSGNNVPSPLQNFAELSTRYECDPYILHNLVELGFKEPTPIQRQAIPVLLSGRECFACAP 647
            VSGNNVPSPLQNFAELSTRYECDPYILHNLVELGFKEPTPIQRQAIPVLLSGRECFACAP
Sbjct: 124  VSGNNVPSPLQNFAELSTRYECDPYILHNLVELGFKEPTPIQRQAIPVLLSGRECFACAP 183

Query: 648  TGSGKTLAFLCPVLMKLKDPSKEGIRAVILCPTRELASQTTRECKKLAKGKKFSIKLVTK 707
            TGSGKTLAFLCPVLMKLKDPSKEGIRAVILCPTRELASQTTRECKKLAKGKKFSIKLVTK
Sbjct: 184  TGSGKTLAFLCPVLMKLKDPSKEGIRAVILCPTRELASQTTRECKKLAKGKKFSIKLVTK 243

Query: 708  EVIRHADFSKFSCDVLISTPLRLRLAIRKKKIDLSRVEHLVLDESDKLFELGLLKQIDTI 767
            EVIRHADFSKFSCDVLISTPLRLRLAIRKKKIDLSRVEHLVLDESDKLFELGLLKQIDTI
Sbjct: 244  EVIRHADFSKFSCDVLISTPLRLRLAIRKKKIDLSRVEHLVLDESDKLFELGLLKQIDTI 303

Query: 768  VKACSNPSIVRSLFSATLPDFVEDLARSVMHDAVRVIVGRKNTASETVKQKLVFAGSEEG 827
            VKACSNPSIVRSLFSATLPDFVEDLARSVMHDAVRVIVGRKNTASETVKQKLVFAGSEEG
Sbjct: 304  VKACSNPSIVRSLFSATLPDFVEDLARSVMHDAVRVIVGRKNTASETVKQKLVFAGSEEG 363

Query: 828  KLLALRQSFSESLNPPVLIFVQSKERAKDLYGELAFENIKVNVIHSDLSEIERENVVYDF 887
            KLLALRQSFSESLNPPVLIFVQSKERAKDLYGELAFENIKVNVIHSDLSEIERENVVYDF
Sbjct: 364  KLLALRQSFSESLNPPVLIFVQSKERAKDLYGELAFENIKVNVIHSDLSEIERENVVYDF 423

Query: 888  RAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTD 947
            RAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTD
Sbjct: 424  RAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTD 483

Query: 948  EDIPFLRNIANVMSASGCEVPSWITELQKKKWKKHRPKRDSISNKPKDDGDTEQPKKKSK 1007
            EDIPFLRNIANVMSASGCEVPSWITELQKKKWKKHRPKRDSISNKPKDDGDTEQPKKKSK
Sbjct: 484  EDIPFLRNIANVMSASGCEVPSWITELQKKKWKKHRPKRDSISNKPKDDGDTEQPKKKSK 543

Query: 1008 KRRPKRDSIVTKPKGNGDSELQKKKSKKQRPEGDPIRNKPKDKGDTEQQKQKLKKRKLKR 1067
            KRRPKRDSIVTKPKGNGDSELQKKKSKKQRPEGDPIRNKPKDKGDTEQQKQKLKKRKLKR
Sbjct: 544  KRRPKRDSIVTKPKGNGDSELQKKKSKKQRPEGDPIRNKPKDKGDTEQQKQKLKKRKLKR 603

Query: 1068 DSISTKPKDDGVSKPQKKKSKKAEEA 1094
            DSISTKPKDDGVSKPQKKKSKKAEEA
Sbjct: 604  DSISTKPKDDGVSKPQKKKSKKAEEA 629

[Close]

BLAST of CmaCh06G003630 vs. ExPASy TrEMBL
Match: A0A6J1G4H0 (DEAD-box ATP-dependent RNA helicase 57 OS=Cucurbita moschata OX=3662 GN=LOC111450647 PE=4 SV=1)

HSP 1 Score: 1127.5 bits (2915), Expect = 0.0e+00
Identity = 589/608 (96.88%), Postives = 598/608 (98.36%), Query Frame = 0


Query: 468  GASFLFAGIHFDKKRFAADFSRFEGKKESDNGIEGLSSIANSDFEVIEDSTPSEKRKRKR 527
            GASFLFAGIHFDKKRFAADFSRFEGKKESD+ IEGLS+IANSDFEVIEDST SEKRKRKR
Sbjct: 4    GASFLFAGIHFDKKRFAADFSRFEGKKESDDVIEGLSNIANSDFEVIEDSTHSEKRKRKR 63

Query: 528  KSAATESVEGFSVFRDSKLTVAASVNEENHPSENDPSEERKEFHRKLERDALYRKKYNIH 587
            KSAATESVEGFSVF+DSKLTVAASVNEENHPSENDPSEERKEFHRKLERDAL+RKKYNIH
Sbjct: 64   KSAATESVEGFSVFKDSKLTVAASVNEENHPSENDPSEERKEFHRKLERDALFRKKYNIH 123

Query: 588  VSGNNVPSPLQNFAELSTRYECDPYILHNLVELGFKEPTPIQRQAIPVLLSGRECFACAP 647
            VSGNNVPSPLQNFAELSTRYECDPYILHNLVELGFKEPTPIQRQAIPVLLSGRECFACAP
Sbjct: 124  VSGNNVPSPLQNFAELSTRYECDPYILHNLVELGFKEPTPIQRQAIPVLLSGRECFACAP 183

Query: 648  TGSGKTLAFLCPVLMKLKDPSKEGIRAVILCPTRELASQTTRECKKLAKGKKFSIKLVTK 707
            TGSGKTLAFLCPVLMKLKDPSKEGIRAVILCPTRELASQTTRECKKLAKGKKFSIKLVTK
Sbjct: 184  TGSGKTLAFLCPVLMKLKDPSKEGIRAVILCPTRELASQTTRECKKLAKGKKFSIKLVTK 243

Query: 708  EVIRHADFSKFSCDVLISTPLRLRLAIRKKKIDLSRVEHLVLDESDKLFELGLLKQIDTI 767
            EVIRHADFSKFSCDVLISTPLRLRLAIRKKKIDL RVEHLVLDESDKLFELGLLKQIDTI
Sbjct: 244  EVIRHADFSKFSCDVLISTPLRLRLAIRKKKIDLCRVEHLVLDESDKLFELGLLKQIDTI 303

Query: 768  VKACSNPSIVRSLFSATLPDFVEDLARSVMHDAVRVIVGRKNTASETVKQKLVFAGSEEG 827
            VKACSNPSIVRSLFSATLPDFVEDLARSVMHDAVRVIVGRKNTASETVKQKLVFAGSEEG
Sbjct: 304  VKACSNPSIVRSLFSATLPDFVEDLARSVMHDAVRVIVGRKNTASETVKQKLVFAGSEEG 363

Query: 828  KLLALRQSFSESLNPPVLIFVQSKERAKDLYGELAFENIKVNVIHSDLSEIERENVVYDF 887
            KLLALRQSFSESLNPPVLIFVQSKERAKDLYGELAFENIKVNVIHSDLSEIERENVVYDF
Sbjct: 364  KLLALRQSFSESLNPPVLIFVQSKERAKDLYGELAFENIKVNVIHSDLSEIERENVVYDF 423

Query: 888  RAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTD 947
            RAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTD
Sbjct: 424  RAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTD 483

Query: 948  EDIPFLRNIANVMSASGCEVPSWITELQKKKWKKHRPKRDSISNKPKDDGDTEQPKKKSK 1007
            EDIPFLRNIANVMSASGCEVPSWITELQKKKWKKHRPKRDSISNKPKDDGDTEQPKKKSK
Sbjct: 484  EDIPFLRNIANVMSASGCEVPSWITELQKKKWKKHRPKRDSISNKPKDDGDTEQPKKKSK 543

Query: 1008 KRRPKRDSIVTKPKGNGDSELQKKKSKKQRPEGDPIRNKPKDKGDTEQQKQKLKKRKLKR 1067
            KRRPKRDSIVTKPKG+GDSELQKKKSKK R EGD I+NKPKD+GDTEQQK+K KK KLKR
Sbjct: 544  KRRPKRDSIVTKPKGDGDSELQKKKSKKHRLEGDSIQNKPKDEGDTEQQKKKSKKCKLKR 603

Query: 1068 DSISTKPK 1076
            DSIS + K
Sbjct: 604  DSISNQTK 611

[Close]

BLAST of CmaCh06G003630 vs. ExPASy TrEMBL
Match: A0A0A0LAD5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G736920 PE=4 SV=1)

HSP 1 Score: 1021.5 bits (2640), Expect = 2.5e-294
Identity = 527/610 (86.39%), Postives = 566/610 (92.79%), Query Frame = 0


Query: 468  GASFLFAGIHFDKKRFAADFSRFEGKKESDNGIEGLSSIANSDFEVIEDSTPSEKRKRKR 527
            G SFLFAGIHFDKKRFAADF++FEGKKESDN +EG SSI N D EV E STPS+KRKRKR
Sbjct: 4    GTSFLFAGIHFDKKRFAADFAKFEGKKESDNVVEGPSSIDNGDLEVHEGSTPSDKRKRKR 63

Query: 528  KSAATESVEGFSVFRDSKLTVAASVNEENHPSENDPSEERKEFHRKLERDALYRKKYNIH 587
            KSA  +SVEGFSVF+DSK T   S+NEENH SENDPSEE+KEF+RKLERDAL+RKKYNIH
Sbjct: 64   KSATAKSVEGFSVFKDSKSTADTSLNEENHLSENDPSEEKKEFYRKLERDALFRKKYNIH 123

Query: 588  VSGNNVPSPLQNFAELSTRYECDPYILHNLVELGFKEPTPIQRQAIPVLLSGRECFACAP 647
            VSGNNVPSPLQNF ELSTRY+CD Y+LHNLVELGFKEPTPIQRQAIPVLLSGRECFACAP
Sbjct: 124  VSGNNVPSPLQNFGELSTRYDCDSYLLHNLVELGFKEPTPIQRQAIPVLLSGRECFACAP 183

Query: 648  TGSGKTLAFLCPVLMKLKDPSKEGIRAVILCPTRELASQTTRECKKLAKGKKFSIKLVTK 707
            TGSGKTLAF+CP+LM+LKDPSKEGIRAVILCPTRELASQT RECKKLAKGKKF IKLVTK
Sbjct: 184  TGSGKTLAFVCPMLMRLKDPSKEGIRAVILCPTRELASQTIRECKKLAKGKKFHIKLVTK 243

Query: 708  EVIRHADFSKFSCDVLISTPLRLRLAIRKKKIDLSRVEHLVLDESDKLFELGLLKQIDTI 767
            EV+RHADFSKFSCDVLISTPLRLRLAIRKKKIDLSRVE+LVLDESDKLFELGL+KQID +
Sbjct: 244  EVLRHADFSKFSCDVLISTPLRLRLAIRKKKIDLSRVEYLVLDESDKLFELGLIKQIDAV 303

Query: 768  VKACSNPSIVRSLFSATLPDFVEDLARSVMHDAVRVIVGRKNTASETVKQKLVFAGSEEG 827
            VKACSNPSIVRSLFSATLPDFVEDLARSVMHDAVRVIVGRKNTASETVKQKLVFAGSEEG
Sbjct: 304  VKACSNPSIVRSLFSATLPDFVEDLARSVMHDAVRVIVGRKNTASETVKQKLVFAGSEEG 363

Query: 828  KLLALRQSFSESLNPPVLIFVQSKERAKDLYGELAFENIKVNVIHSDLSEIERENVVYDF 887
            KLLALRQSFSESLNPPVLIFVQSKERAK+LYGELAFENI+V+VIHSDLS++ERENVV DF
Sbjct: 364  KLLALRQSFSESLNPPVLIFVQSKERAKELYGELAFENIRVSVIHSDLSQLERENVVDDF 423

Query: 888  RAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTD 947
            RAGKTWVLIATDVI+RGMDFKGVNCVINYDFPDSA+AYIHRIGRSGRAGRSGEAITFYTD
Sbjct: 424  RAGKTWVLIATDVISRGMDFKGVNCVINYDFPDSAAAYIHRIGRSGRAGRSGEAITFYTD 483

Query: 948  EDIPFLRNIANVMSASGCEVPSWITELQKKKWKKHRPKRDSISNKPKDDGDTEQPKKKSK 1007
            EDIPFLRNIANVMSASGCEVPSWITEL+K KWKKHRPKRDSIS KP +DGDTE PKKKSK
Sbjct: 484  EDIPFLRNIANVMSASGCEVPSWITELRKMKWKKHRPKRDSISTKPHEDGDTEPPKKKSK 543

Query: 1008 KRRPKRDSIVTKPKGNGDSELQKKKSKKQRPEGDPIRNKPKDKGDTEQQKQKLKKRKLKR 1067
            K RPKR+S+ TKP  +GD+ELQKKKSKK +P  D +  K KD  D   + +KLKK++ KR
Sbjct: 544  KHRPKRNSVATKPNQDGDTELQKKKSKKLKPRRDSVSMKSKDDDDAGLKTKKLKKQRHKR 603

Query: 1068 DSISTKPKDD 1078
            DS+ TKPKDD
Sbjct: 604  DSVPTKPKDD 613

[Close]

BLAST of CmaCh06G003630 vs. ExPASy TrEMBL
Match: A0A5A7TRJ2 (DEAD-box ATP-dependent RNA helicase 57 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002400 PE=4 SV=1)

HSP 1 Score: 1005.0 bits (2597), Expect = 2.4e-289
Identity = 521/610 (85.41%), Postives = 562/610 (92.13%), Query Frame = 0


Query: 468  GASFLFAGIHFDKKRFAADFSRFEGKKESDNGIEGLSSIANSDFEVIEDSTPSEKRKRKR 527
            G SFLFAGIHF+KKRFAADF+RFEGKKESDN +EG SSI N   EV E STPS+KRKRKR
Sbjct: 4    GTSFLFAGIHFNKKRFAADFARFEGKKESDNVVEGPSSIGNGVLEVHEGSTPSDKRKRKR 63

Query: 528  KSAATESVEGFSVFRDSKLTVAASVNEENHPSENDPSEERKEFHRKLERDALYRKKYNIH 587
            KS   +SVEGFSVF+DSK T  ASVNEENH SENDPS E+KEF+RKLERDAL+RKKYNIH
Sbjct: 64   KSETAKSVEGFSVFKDSKSTADASVNEENHLSENDPSNEKKEFYRKLERDALFRKKYNIH 123

Query: 588  VSGNNVPSPLQNFAELSTRYECDPYILHNLVELGFKEPTPIQRQAIPVLLSGRECFACAP 647
            VSGNN+ SPLQNF ELSTRY+CD Y+LHNL+ELGFKEPTPIQRQAIPVLLSGRECFACAP
Sbjct: 124  VSGNNITSPLQNFGELSTRYDCDSYLLHNLIELGFKEPTPIQRQAIPVLLSGRECFACAP 183

Query: 648  TGSGKTLAFLCPVLMKLKDPSKEGIRAVILCPTRELASQTTRECKKLAKGKKFSIKLVTK 707
            TGSGKTLAF+CP+LM+LKDPSKEGIRAVILCPTRELASQTTRECKKLAKGKKF IKLVTK
Sbjct: 184  TGSGKTLAFVCPMLMRLKDPSKEGIRAVILCPTRELASQTTRECKKLAKGKKFHIKLVTK 243

Query: 708  EVIRHADFSKFSCDVLISTPLRLRLAIRKKKIDLSRVEHLVLDESDKLFELGLLKQIDTI 767
            EV+RHADFSKFSCDVLISTPLRLRLAIRKKKIDLSRVE+LVLDESDKLFELGL+KQIDT+
Sbjct: 244  EVLRHADFSKFSCDVLISTPLRLRLAIRKKKIDLSRVEYLVLDESDKLFELGLIKQIDTV 303

Query: 768  VKACSNPSIVRSLFSATLPDFVEDLARSVMHDAVRVIVGRKNTASETVKQKLVFAGSEEG 827
            VKACSNPSIVRSLFSATLPDFVEDLARSVMHDAVRVIVGRKNTASETVKQKLVFAGSEEG
Sbjct: 304  VKACSNPSIVRSLFSATLPDFVEDLARSVMHDAVRVIVGRKNTASETVKQKLVFAGSEEG 363

Query: 828  KLLALRQSFSESLNPPVLIFVQSKERAKDLYGELAFENIKVNVIHSDLSEIERENVVYDF 887
            KLLALRQSFSESLNPPVLIFVQSKERAK+LY ELAFENI+V+VIHSDLS++ERENVV DF
Sbjct: 364  KLLALRQSFSESLNPPVLIFVQSKERAKELYAELAFENIRVSVIHSDLSQLERENVVDDF 423

Query: 888  RAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTD 947
            RAGKTWVLIATDVI+RGMDFKGVNCVINYDFPDSA+AYIHRIGRSGRAGRSGEAITFYTD
Sbjct: 424  RAGKTWVLIATDVISRGMDFKGVNCVINYDFPDSAAAYIHRIGRSGRAGRSGEAITFYTD 483

Query: 948  EDIPFLRNIANVMSASGCEVPSWITELQKKKWKKHRPKRDSISNKPKDDGDTEQPKKKSK 1007
            EDIPFLRNIANVMSASGCEVPSWITEL+K KWKKHRPKRDSIS KP +DGDTE PKKK+K
Sbjct: 484  EDIPFLRNIANVMSASGCEVPSWITELRKMKWKKHRPKRDSISTKPNEDGDTEPPKKKTK 543

Query: 1008 KRRPKRDSIVTKPKGNGDSELQKKKSKKQRPEGDPIRNKPKDKGDTEQQKQKLKKRKLKR 1067
            K RPKR+SI TKP  +GD+EL+KK S+K + + D    K KD  D   QK+K KK + KR
Sbjct: 544  KHRPKRNSIATKPNQDGDTELKKKNSRKLKRKRDSDSIKSKDGDDAGLQKKKSKKHRHKR 603

Query: 1068 DSISTKPKDD 1078
            DS+STKPK+D
Sbjct: 604  DSVSTKPKND 613

[Close]

BLAST of CmaCh06G003630 vs. NCBI nr
Match: RXH80674.1 (hypothetical protein DVH24_004588 [Malus domestica])

HSP 1 Score: 1394.8 bits (3609), Expect = 0.0e+00
Identity = 734/1005 (73.03%), Postives = 848/1005 (84.38%), Query Frame = 0


Query: 6   LASARRDPIKSSVGNVAAHRRRQHALTVGKERRESLMRAKRICRIGI---GDVALENEMM 65
           +AS RRDPIKSSV NVA  RRRQ A++VGKERRE L+RAKR+CR+GI    D  +E+EM+
Sbjct: 1   MASHRRDPIKSSVANVAGQRRRQQAVSVGKERRELLVRAKRLCRVGISGDSDDTVESEMI 60

Query: 66  MDEEVSILEVQTSSAVDELKSAVAYQGKGAMQKRIHALRELRRLLSRSEFPPVEAALKAG 125
           +DEE SILE QTSSAV+ LK+AVAYQGKGA++KR+ ALRELRRLLSRSEFPPVEAALKAG
Sbjct: 61  IDEEQSILEAQTSSAVEGLKTAVAYQGKGALEKRVSALRELRRLLSRSEFPPVEAALKAG 120

Query: 126 AVSLLVQCLSFGSSDEQLLEAAWCLTNIGAGKPEETKSLMPALPLLIAHLGEKSSLLVAE 185
            + LLVQCLSFGS DEQLLEAAWCLTNI AGKPEETK+L+PALPLLIAHLGEKSSL VAE
Sbjct: 121 VIPLLVQCLSFGSPDEQLLEAAWCLTNIAAGKPEETKALLPALPLLIAHLGEKSSLPVAE 180

Query: 186 QCAWALGNVAGEEMELRNILLSQGALLPLARMLFPNKGSSVKTAAWALSNLIKGPDSRAA 245
           QCAWALGNVAGE  ELR+ILLSQGALLPLARM+ PNKGS+V+TAAWALSNLIKGP+ +A 
Sbjct: 181 QCAWALGNVAGEGEELRSILLSQGALLPLARMMLPNKGSTVRTAAWALSNLIKGPNPKAT 240

Query: 246 TELIKIDGVLDAIIRHLGKADDELATEVAWVIVYLSALSNVATSILVKSEVLQLLVERLS 305
           TELI++DGVLDA+IRHL K+DDELATEVAWV+VYLSALSN+AT +LVKS+VLQLLVERL+
Sbjct: 241 TELIRVDGVLDALIRHLRKSDDELATEVAWVVVYLSALSNLATGMLVKSDVLQLLVERLA 300

Query: 306 TSNSLQLLIPEASWVLSNIAAGSMEHKQLIYISDAVPLLIRLLSSAPFDVRKEVAYVLGN 365
           TSNSLQLLIPEA+WVLSNIAAGS+EHKQLIY S+AV +L+RLLS+APFD+RKEVAYVLGN
Sbjct: 301 TSNSLQLLIPEAAWVLSNIAAGSVEHKQLIYSSEAVLVLLRLLSTAPFDIRKEVAYVLGN 360

Query: 366 LCAAPDESGE--GKPKLLVENLVSLVGKGCLPGFIDLVRSADTEAARLGFQFLELVLRGM 425
           LC  P    E  GKP  ++E+LVSLVG+GCL GFIDLV S DTEAARLG QF EL  RG 
Sbjct: 361 LCVLPISPTERDGKPNFILEHLVSLVGRGCLAGFIDLVNSVDTEAARLGLQFTELDSRGR 420

Query: 426 P-NGEGPRLVEREDGIEAMERFQFHENEDLRNMANRLVDMYFGEDYGLGASFLFAGIHFD 485
              G   RL+      + +     H  +        +++         G SFLFAG++F+
Sbjct: 421 AIRGFNERLINP----QIVTELSLHLGQFAACHPPPIMEE--------GTSFLFAGVNFN 480

Query: 486 KKRFAADFSRFEGKK-ESDNGIE--GLSSIANSDFEVIEDSTPSEKR-----KRKRKSAA 545
           +K+F+ DFSRF+ K  ES+  +E   L  I  S  E +      E R     KRKRK   
Sbjct: 481 RKKFSRDFSRFQKKNIESEKVVEESSLFGITESATEQVAAEEEEEVRAVPVKKRKRKGEV 540

Query: 546 TESVEGFSVFRDSKLTVAASVNEENHPSENDPSEERKEFHRKLERDALYRKKYNIHVSGN 605
           +E VEG SVF+ SK+  AA   +E     N+ SE++KE +R+LERD+L RKKYNIHVSGN
Sbjct: 541 SEGVEGISVFKTSKMAKAAKAEKEK--PGNELSEQKKELNRQLERDSLLRKKYNIHVSGN 600

Query: 606 NVPSPLQNFAELSTRYECDPYILHNLVELGFKEPTPIQRQAIPVLLSGRECFACAPTGSG 665
           N+PSPL +FA+L++RY C+PY+L NL ELGFKEPTPIQRQAIPVLLS RECFACAPTGSG
Sbjct: 601 NIPSPLDSFADLTSRYGCEPYLLQNLAELGFKEPTPIQRQAIPVLLSSRECFACAPTGSG 660

Query: 666 KTLAFLCPVLMKLKDPSKEGIRAVILCPTRELASQTTRECKKLAKGKKFSIKLVTKEVIR 725
           KTLAF+CP+LMKLK  SK+GIRAVILCPTRELA+QTTRECKK+AKG KF IKL+TK++ R
Sbjct: 661 KTLAFVCPMLMKLKHTSKDGIRAVILCPTRELAAQTTRECKKMAKGNKFYIKLMTKDLAR 720

Query: 726 HADFSKFSCDVLISTPLRLRLAIRKKKIDLSRVEHLVLDESDKLFELGLLKQIDTIVKAC 785
           +ADFSK  CD+LISTPLRLRLAIRKKK+DLSRVE+LVLDESDKLFELGLLKQID++VKAC
Sbjct: 721 NADFSKIRCDILISTPLRLRLAIRKKKVDLSRVEYLVLDESDKLFELGLLKQIDSVVKAC 780

Query: 786 SNPSIVRSLFSATLPDFVEDLARSVMHDAVRVIVGRKNTASETVKQKLVFAGSEEGKLLA 845
           SNPSI+RSLFSATLPDFVE+LAR++MHDAVRVI+GRKNTASET+KQKLVFAGSEEGKLLA
Sbjct: 781 SNPSIIRSLFSATLPDFVEELARTIMHDAVRVIIGRKNTASETIKQKLVFAGSEEGKLLA 840

Query: 846 LRQSFSESLNPPVLIFVQSKERAKDLYGELAFENIKVNVIHSDLSEIERENVVYDFRAGK 905
           LRQSF ESLNPPVLIFVQSKERAK+LYGEL FENI+V  IHSD+S+ +REN V DFRAGK
Sbjct: 841 LRQSFKESLNPPVLIFVQSKERAKELYGELLFENIRVGAIHSDMSQAQRENAVDDFRAGK 900

Query: 906 TWVLIATDVIARGMDFKGVNCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTDEDIP 965
           TWVL+ATDVIARGMDFKGVNCVINYDFPDSA+AYIHRIGR GRAGRSGEAITFYT+EDIP
Sbjct: 901 TWVLLATDVIARGMDFKGVNCVINYDFPDSAAAYIHRIGRCGRAGRSGEAITFYTEEDIP 960

Query: 966 FLRNIANVMSASGCEVPSWITELQKKKWKKHRPKRDSISNKPKDD 997
           +L+NIANVMS SGCEVPSWI  L+K+KWKKHRP+R+SIS +PKD+
Sbjct: 961 YLKNIANVMSTSGCEVPSWIMALRKQKWKKHRPRRESISTQPKDE 991

[Close]

BLAST of CmaCh06G003630 vs. NCBI nr
Match: XP_023005802.1 (DEAD-box ATP-dependent RNA helicase 57 [Cucurbita maxima])

HSP 1 Score: 1198.7 bits (3100), Expect = 0.0e+00
Identity = 626/626 (100.00%), Postives = 626/626 (100.00%), Query Frame = 0


Query: 468  GASFLFAGIHFDKKRFAADFSRFEGKKESDNGIEGLSSIANSDFEVIEDSTPSEKRKRKR 527
            GASFLFAGIHFDKKRFAADFSRFEGKKESDNGIEGLSSIANSDFEVIEDSTPSEKRKRKR
Sbjct: 4    GASFLFAGIHFDKKRFAADFSRFEGKKESDNGIEGLSSIANSDFEVIEDSTPSEKRKRKR 63

Query: 528  KSAATESVEGFSVFRDSKLTVAASVNEENHPSENDPSEERKEFHRKLERDALYRKKYNIH 587
            KSAATESVEGFSVFRDSKLTVAASVNEENHPSENDPSEERKEFHRKLERDALYRKKYNIH
Sbjct: 64   KSAATESVEGFSVFRDSKLTVAASVNEENHPSENDPSEERKEFHRKLERDALYRKKYNIH 123

Query: 588  VSGNNVPSPLQNFAELSTRYECDPYILHNLVELGFKEPTPIQRQAIPVLLSGRECFACAP 647
            VSGNNVPSPLQNFAELSTRYECDPYILHNLVELGFKEPTPIQRQAIPVLLSGRECFACAP
Sbjct: 124  VSGNNVPSPLQNFAELSTRYECDPYILHNLVELGFKEPTPIQRQAIPVLLSGRECFACAP 183

Query: 648  TGSGKTLAFLCPVLMKLKDPSKEGIRAVILCPTRELASQTTRECKKLAKGKKFSIKLVTK 707
            TGSGKTLAFLCPVLMKLKDPSKEGIRAVILCPTRELASQTTRECKKLAKGKKFSIKLVTK
Sbjct: 184  TGSGKTLAFLCPVLMKLKDPSKEGIRAVILCPTRELASQTTRECKKLAKGKKFSIKLVTK 243

Query: 708  EVIRHADFSKFSCDVLISTPLRLRLAIRKKKIDLSRVEHLVLDESDKLFELGLLKQIDTI 767
            EVIRHADFSKFSCDVLISTPLRLRLAIRKKKIDLSRVEHLVLDESDKLFELGLLKQIDTI
Sbjct: 244  EVIRHADFSKFSCDVLISTPLRLRLAIRKKKIDLSRVEHLVLDESDKLFELGLLKQIDTI 303

Query: 768  VKACSNPSIVRSLFSATLPDFVEDLARSVMHDAVRVIVGRKNTASETVKQKLVFAGSEEG 827
            VKACSNPSIVRSLFSATLPDFVEDLARSVMHDAVRVIVGRKNTASETVKQKLVFAGSEEG
Sbjct: 304  VKACSNPSIVRSLFSATLPDFVEDLARSVMHDAVRVIVGRKNTASETVKQKLVFAGSEEG 363

Query: 828  KLLALRQSFSESLNPPVLIFVQSKERAKDLYGELAFENIKVNVIHSDLSEIERENVVYDF 887
            KLLALRQSFSESLNPPVLIFVQSKERAKDLYGELAFENIKVNVIHSDLSEIERENVVYDF
Sbjct: 364  KLLALRQSFSESLNPPVLIFVQSKERAKDLYGELAFENIKVNVIHSDLSEIERENVVYDF 423

Query: 888  RAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTD 947
            RAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTD
Sbjct: 424  RAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTD 483

Query: 948  EDIPFLRNIANVMSASGCEVPSWITELQKKKWKKHRPKRDSISNKPKDDGDTEQPKKKSK 1007
            EDIPFLRNIANVMSASGCEVPSWITELQKKKWKKHRPKRDSISNKPKDDGDTEQPKKKSK
Sbjct: 484  EDIPFLRNIANVMSASGCEVPSWITELQKKKWKKHRPKRDSISNKPKDDGDTEQPKKKSK 543

Query: 1008 KRRPKRDSIVTKPKGNGDSELQKKKSKKQRPEGDPIRNKPKDKGDTEQQKQKLKKRKLKR 1067
            KRRPKRDSIVTKPKGNGDSELQKKKSKKQRPEGDPIRNKPKDKGDTEQQKQKLKKRKLKR
Sbjct: 544  KRRPKRDSIVTKPKGNGDSELQKKKSKKQRPEGDPIRNKPKDKGDTEQQKQKLKKRKLKR 603

Query: 1068 DSISTKPKDDGVSKPQKKKSKKAEEA 1094
            DSISTKPKDDGVSKPQKKKSKKAEEA
Sbjct: 604  DSISTKPKDDGVSKPQKKKSKKAEEA 629

[Close]

BLAST of CmaCh06G003630 vs. NCBI nr
Match: XP_023540379.1 (DEAD-box ATP-dependent RNA helicase 57 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1188.7 bits (3074), Expect = 0.0e+00
Identity = 620/626 (99.04%), Postives = 625/626 (99.84%), Query Frame = 0


Query: 468  GASFLFAGIHFDKKRFAADFSRFEGKKESDNGIEGLSSIANSDFEVIEDSTPSEKRKRKR 527
            GASFLFAGIHFDKKRFAADFSRFEGKKESDNGIEGLSSIANSDFEVIEDSTPSEKRKRKR
Sbjct: 4    GASFLFAGIHFDKKRFAADFSRFEGKKESDNGIEGLSSIANSDFEVIEDSTPSEKRKRKR 63

Query: 528  KSAATESVEGFSVFRDSKLTVAASVNEENHPSENDPSEERKEFHRKLERDALYRKKYNIH 587
            KSAATESVEGFSVF+DSKLTVAASVNEENHPSENDPSEERKEFHRKLERDAL+RKKYNIH
Sbjct: 64   KSAATESVEGFSVFKDSKLTVAASVNEENHPSENDPSEERKEFHRKLERDALFRKKYNIH 123

Query: 588  VSGNNVPSPLQNFAELSTRYECDPYILHNLVELGFKEPTPIQRQAIPVLLSGRECFACAP 647
            VSGNNVPSPLQNFAELSTRYECDPYILHNLVELGFKEPTPIQRQAIPVLLSGRECFACAP
Sbjct: 124  VSGNNVPSPLQNFAELSTRYECDPYILHNLVELGFKEPTPIQRQAIPVLLSGRECFACAP 183

Query: 648  TGSGKTLAFLCPVLMKLKDPSKEGIRAVILCPTRELASQTTRECKKLAKGKKFSIKLVTK 707
            TGSGKTLAFLCPVLMKLKDPSKEGIRAVILCPTRELASQTTRECKKLAKGKKFSIKLVTK
Sbjct: 184  TGSGKTLAFLCPVLMKLKDPSKEGIRAVILCPTRELASQTTRECKKLAKGKKFSIKLVTK 243

Query: 708  EVIRHADFSKFSCDVLISTPLRLRLAIRKKKIDLSRVEHLVLDESDKLFELGLLKQIDTI 767
            EVIRHADFSKFSCDVLISTPLRLRLAIRKKKIDLSRVEHLVLDESDKLFELGLLKQIDTI
Sbjct: 244  EVIRHADFSKFSCDVLISTPLRLRLAIRKKKIDLSRVEHLVLDESDKLFELGLLKQIDTI 303

Query: 768  VKACSNPSIVRSLFSATLPDFVEDLARSVMHDAVRVIVGRKNTASETVKQKLVFAGSEEG 827
            VKACSNPSIVRSLFSATLPDFVEDLARSVMHDAVRVIVGRKNTASETVKQKLVFAGSEEG
Sbjct: 304  VKACSNPSIVRSLFSATLPDFVEDLARSVMHDAVRVIVGRKNTASETVKQKLVFAGSEEG 363

Query: 828  KLLALRQSFSESLNPPVLIFVQSKERAKDLYGELAFENIKVNVIHSDLSEIERENVVYDF 887
            KLLALRQSFSESLNPPVLIFVQSKERAKDLYGELAFENIKVNVIHSDLSEIERENVVYDF
Sbjct: 364  KLLALRQSFSESLNPPVLIFVQSKERAKDLYGELAFENIKVNVIHSDLSEIERENVVYDF 423

Query: 888  RAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTD 947
            RAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTD
Sbjct: 424  RAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTD 483

Query: 948  EDIPFLRNIANVMSASGCEVPSWITELQKKKWKKHRPKRDSISNKPKDDGDTEQPKKKSK 1007
            EDIPFLRNIANVMSASGCEVPSWITELQKKKWKKHRPKRDSISNKPKDDGDTEQPKKKSK
Sbjct: 484  EDIPFLRNIANVMSASGCEVPSWITELQKKKWKKHRPKRDSISNKPKDDGDTEQPKKKSK 543

Query: 1008 KRRPKRDSIVTKPKGNGDSELQKKKSKKQRPEGDPIRNKPKDKGDTEQQKQKLKKRKLKR 1067
            KRRPKRDSIVTKPKG+GDSELQKKKSKKQRPEGDPIRNKPKD+GDTEQQK+K KKRKLKR
Sbjct: 544  KRRPKRDSIVTKPKGDGDSELQKKKSKKQRPEGDPIRNKPKDEGDTEQQKKKSKKRKLKR 603

Query: 1068 DSISTKPKDDGVSKPQKKKSKKAEEA 1094
            DSISTKPKDDGVSKPQKKKSKKAEEA
Sbjct: 604  DSISTKPKDDGVSKPQKKKSKKAEEA 629

[Close]

BLAST of CmaCh06G003630 vs. NCBI nr
Match: KAG6596460.1 (DEAD-box ATP-dependent RNA helicase 57, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1161.0 bits (3002), Expect = 0.0e+00
Identity = 607/626 (96.96%), Postives = 617/626 (98.56%), Query Frame = 0


Query: 468  GASFLFAGIHFDKKRFAADFSRFEGKKESDNGIEGLSSIANSDFEVIEDSTPSEKRKRKR 527
            GASFLFAGIHFDKKRFAADFSRFEGKKESD+ IEGLS+IANSDFEVIEDST SEKRKRKR
Sbjct: 4    GASFLFAGIHFDKKRFAADFSRFEGKKESDDVIEGLSNIANSDFEVIEDSTHSEKRKRKR 63

Query: 528  KSAATESVEGFSVFRDSKLTVAASVNEENHPSENDPSEERKEFHRKLERDALYRKKYNIH 587
            KSAATESVEGFSVF+DSKLTVAASVNEENHPSENDPSEERKEFHRKLERDAL+RKKYNIH
Sbjct: 64   KSAATESVEGFSVFKDSKLTVAASVNEENHPSENDPSEERKEFHRKLERDALFRKKYNIH 123

Query: 588  VSGNNVPSPLQNFAELSTRYECDPYILHNLVELGFKEPTPIQRQAIPVLLSGRECFACAP 647
            VSGNNVPSPLQNFAELSTRYECDPYILHNLVELGFKEPTPIQRQAIPVLLSGRECFACAP
Sbjct: 124  VSGNNVPSPLQNFAELSTRYECDPYILHNLVELGFKEPTPIQRQAIPVLLSGRECFACAP 183

Query: 648  TGSGKTLAFLCPVLMKLKDPSKEGIRAVILCPTRELASQTTRECKKLAKGKKFSIKLVTK 707
            TGSGKTLAFLCPVLMKLKDPSKEGIRAVILCPTRELASQTTRECKKLAKGKKFSIKLVTK
Sbjct: 184  TGSGKTLAFLCPVLMKLKDPSKEGIRAVILCPTRELASQTTRECKKLAKGKKFSIKLVTK 243

Query: 708  EVIRHADFSKFSCDVLISTPLRLRLAIRKKKIDLSRVEHLVLDESDKLFELGLLKQIDTI 767
            EVIRHADFSKFSCDVLISTPLRLRLAIRKKKIDLSRVEHLVLDESDKLFELGLLKQIDTI
Sbjct: 244  EVIRHADFSKFSCDVLISTPLRLRLAIRKKKIDLSRVEHLVLDESDKLFELGLLKQIDTI 303

Query: 768  VKACSNPSIVRSLFSATLPDFVEDLARSVMHDAVRVIVGRKNTASETVKQKLVFAGSEEG 827
            VKACSNPSIVRSLFSATLPDFVEDLARSVMHDAVRVIVGRKNTAS TVKQKLVFAGSEEG
Sbjct: 304  VKACSNPSIVRSLFSATLPDFVEDLARSVMHDAVRVIVGRKNTASATVKQKLVFAGSEEG 363

Query: 828  KLLALRQSFSESLNPPVLIFVQSKERAKDLYGELAFENIKVNVIHSDLSEIERENVVYDF 887
            KLLALRQSFSESLNPP+LIFVQSK+RAKDLYGELAFENIKVNVIHSDLSEIERENVVYDF
Sbjct: 364  KLLALRQSFSESLNPPILIFVQSKDRAKDLYGELAFENIKVNVIHSDLSEIERENVVYDF 423

Query: 888  RAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTD 947
            RAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTD
Sbjct: 424  RAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTD 483

Query: 948  EDIPFLRNIANVMSASGCEVPSWITELQKKKWKKHRPKRDSISNKPKDDGDTEQPKKKSK 1007
            EDIPFLRNIANVMSASGCEVPSWITELQKKKWKKHRPKRDSISNKPKDDGDTEQPKKKSK
Sbjct: 484  EDIPFLRNIANVMSASGCEVPSWITELQKKKWKKHRPKRDSISNKPKDDGDTEQPKKKSK 543

Query: 1008 KRRPKRDSIVTKPKGNGDSELQKKKSKKQRPEGDPIRNKPKDKGDTEQQKQKLKKRKLKR 1067
            KRRPKRDSIVTKP G+GDSELQKKKSKK R EGD I+NKPKD+GDTEQQK+K KKRKLKR
Sbjct: 544  KRRPKRDSIVTKPNGDGDSELQKKKSKKHRLEGDSIQNKPKDEGDTEQQKKKSKKRKLKR 603

Query: 1068 DSISTKPKDDGVSKPQKKKSKKAEEA 1094
            DSISTKPKDDGVSKPQKKKSKK EEA
Sbjct: 604  DSISTKPKDDGVSKPQKKKSKKTEEA 629

[Close]

BLAST of CmaCh06G003630 vs. NCBI nr
Match: XP_022946645.1 (DEAD-box ATP-dependent RNA helicase 57 [Cucurbita moschata])

HSP 1 Score: 1127.5 bits (2915), Expect = 0.0e+00
Identity = 589/608 (96.88%), Postives = 598/608 (98.36%), Query Frame = 0


Query: 468  GASFLFAGIHFDKKRFAADFSRFEGKKESDNGIEGLSSIANSDFEVIEDSTPSEKRKRKR 527
            GASFLFAGIHFDKKRFAADFSRFEGKKESD+ IEGLS+IANSDFEVIEDST SEKRKRKR
Sbjct: 4    GASFLFAGIHFDKKRFAADFSRFEGKKESDDVIEGLSNIANSDFEVIEDSTHSEKRKRKR 63

Query: 528  KSAATESVEGFSVFRDSKLTVAASVNEENHPSENDPSEERKEFHRKLERDALYRKKYNIH 587
            KSAATESVEGFSVF+DSKLTVAASVNEENHPSENDPSEERKEFHRKLERDAL+RKKYNIH
Sbjct: 64   KSAATESVEGFSVFKDSKLTVAASVNEENHPSENDPSEERKEFHRKLERDALFRKKYNIH 123

Query: 588  VSGNNVPSPLQNFAELSTRYECDPYILHNLVELGFKEPTPIQRQAIPVLLSGRECFACAP 647
            VSGNNVPSPLQNFAELSTRYECDPYILHNLVELGFKEPTPIQRQAIPVLLSGRECFACAP
Sbjct: 124  VSGNNVPSPLQNFAELSTRYECDPYILHNLVELGFKEPTPIQRQAIPVLLSGRECFACAP 183

Query: 648  TGSGKTLAFLCPVLMKLKDPSKEGIRAVILCPTRELASQTTRECKKLAKGKKFSIKLVTK 707
            TGSGKTLAFLCPVLMKLKDPSKEGIRAVILCPTRELASQTTRECKKLAKGKKFSIKLVTK
Sbjct: 184  TGSGKTLAFLCPVLMKLKDPSKEGIRAVILCPTRELASQTTRECKKLAKGKKFSIKLVTK 243

Query: 708  EVIRHADFSKFSCDVLISTPLRLRLAIRKKKIDLSRVEHLVLDESDKLFELGLLKQIDTI 767
            EVIRHADFSKFSCDVLISTPLRLRLAIRKKKIDL RVEHLVLDESDKLFELGLLKQIDTI
Sbjct: 244  EVIRHADFSKFSCDVLISTPLRLRLAIRKKKIDLCRVEHLVLDESDKLFELGLLKQIDTI 303

Query: 768  VKACSNPSIVRSLFSATLPDFVEDLARSVMHDAVRVIVGRKNTASETVKQKLVFAGSEEG 827
            VKACSNPSIVRSLFSATLPDFVEDLARSVMHDAVRVIVGRKNTASETVKQKLVFAGSEEG
Sbjct: 304  VKACSNPSIVRSLFSATLPDFVEDLARSVMHDAVRVIVGRKNTASETVKQKLVFAGSEEG 363

Query: 828  KLLALRQSFSESLNPPVLIFVQSKERAKDLYGELAFENIKVNVIHSDLSEIERENVVYDF 887
            KLLALRQSFSESLNPPVLIFVQSKERAKDLYGELAFENIKVNVIHSDLSEIERENVVYDF
Sbjct: 364  KLLALRQSFSESLNPPVLIFVQSKERAKDLYGELAFENIKVNVIHSDLSEIERENVVYDF 423

Query: 888  RAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTD 947
            RAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTD
Sbjct: 424  RAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTD 483

Query: 948  EDIPFLRNIANVMSASGCEVPSWITELQKKKWKKHRPKRDSISNKPKDDGDTEQPKKKSK 1007
            EDIPFLRNIANVMSASGCEVPSWITELQKKKWKKHRPKRDSISNKPKDDGDTEQPKKKSK
Sbjct: 484  EDIPFLRNIANVMSASGCEVPSWITELQKKKWKKHRPKRDSISNKPKDDGDTEQPKKKSK 543

Query: 1008 KRRPKRDSIVTKPKGNGDSELQKKKSKKQRPEGDPIRNKPKDKGDTEQQKQKLKKRKLKR 1067
            KRRPKRDSIVTKPKG+GDSELQKKKSKK R EGD I+NKPKD+GDTEQQK+K KK KLKR
Sbjct: 544  KRRPKRDSIVTKPKGDGDSELQKKKSKKHRLEGDSIQNKPKDEGDTEQQKKKSKKCKLKR 603

Query: 1068 DSISTKPK 1076
            DSIS + K
Sbjct: 604  DSISNQTK 611

[Close]

BLAST of CmaCh06G003630 vs. TAIR 10
Match: AT3G09720.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 726.9 bits (1875), Expect = 2.5e-209
Identity = 372/535 (69.53%), Postives = 436/535 (81.50%), Query Frame = 0


Query: 471  FLFAGIHFDKKRFAADFSRFEGKKESDNGIEGLSSIANSDFEVIEDSTPS---EKRKRKR 530
            FLF G +F+KK+FA DF++F+   E D+  + ++     + +  +          +KRKR
Sbjct: 7    FLFGGTNFNKKKFAPDFAKFKNSTEDDDSNKKVNFFVEEEEDTEQPEAEKVIVSSKKRKR 66

Query: 531  KSAATESVEGFSVFRDSKLTVAASVNEENHPSENDPSEERKEFHRKLERDALYRKKYNIH 590
            +S+ +  VEGF VF+ SK   A    EE           +KE +R++ERDAL RK+Y+IH
Sbjct: 67   RSSNSVPVEGFDVFKSSKKARAKGKAEEQITKNEIVENPKKELNRQMERDALSRKQYSIH 126

Query: 591  VSGNNVPSPLQNFAELSTRYECDPYILHNLVELGFKEPTPIQRQAIPVLLSGRECFACAP 650
            VSGNN+P PL++FAELS+RY C+ YIL NL ELGFKEPTPIQRQAIP+LLSGRECFACAP
Sbjct: 127  VSGNNIPPPLKSFAELSSRYGCEGYILRNLAELGFKEPTPIQRQAIPILLSGRECFACAP 186

Query: 651  TGSGKTLAFLCPVLMKLKDPSKEGIRAVILCPTRELASQTTRECKKLAKGKKFSIKLVTK 710
            TGSGKT AF+CP+L+KLK PS +GIRAVIL P RELA+QT RE KKL KG  F I+L+TK
Sbjct: 187  TGSGKTFAFICPMLIKLKRPSTDGIRAVILSPARELAAQTAREGKKLIKGSNFHIRLMTK 246

Query: 711  EVIRHADFSKFSCDVLISTPLRLRLAIRKKKIDLSRVEHLVLDESDKLFELGLLKQIDTI 770
             +++ ADFSK  CDVLISTP+RL+ AI+ KKIDLS+VE+LVLDESDKLFE  LLKQID +
Sbjct: 247  PLVKTADFSKLWCDVLISTPMRLKRAIKAKKIDLSKVEYLVLDESDKLFEQSLLKQIDCV 306

Query: 771  VKACSNPSIVRSLFSATLPDFVEDLARSVMHDAVRVIVGRKNTASETVKQKLVFAGSEEG 830
            VKACSNPSI+RSLFSATLPD VE+LARS+MHDAVRVI+GRKNTASETVKQKLVFAGSEEG
Sbjct: 307  VKACSNPSIIRSLFSATLPDSVEELARSIMHDAVRVIIGRKNTASETVKQKLVFAGSEEG 366

Query: 831  KLLALRQSFSESLNPPVLIFVQSKERAKDLYGELAFENIKVNVIHSDLSEIERENVVYDF 890
            KLLALRQSF+ESLNPPVLIFVQSKERAK+LY EL  ENI+  VIHSDL   EREN V  F
Sbjct: 367  KLLALRQSFAESLNPPVLIFVQSKERAKELYDELKCENIRAGVIHSDLPPGERENAVDQF 426

Query: 891  RAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTD 950
            RAG+ WVLIATDVIARGMDFKG+NCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYT+
Sbjct: 427  RAGEKWVLIATDVIARGMDFKGINCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTE 486

Query: 951  EDIPFLRNIANVMSASGCEVPSWITELQKKKWKKHRPKRDSISNKPK-DDGDTEQ 1002
            +D+PFLRNIAN M +SGCEVPSWI  L+KKKW+KHRP+RDSIS KPK D  DT++
Sbjct: 487  QDVPFLRNIANTMMSSGCEVPSWIMSLKKKKWRKHRPRRDSISTKPKADKNDTDE 541

[Close]

BLAST of CmaCh06G003630 vs. TAIR 10
Match: AT5G03070.1 (importin alpha isoform 9 )

HSP 1 Score: 662.9 bits (1709), Expect = 4.4e-190
Identity = 348/518 (67.18%), Postives = 416/518 (80.31%), Query Frame = 0


Query: 1   MADECLASARRDPIKSSVGNVAAHRRRQHALTVGKERRESLMRAKRICRIG----IGDVA 60
           MAD+  AS RRDPIKSSVGNVA  RRR+ A+TV KERRE L+RAKR+CR+G    + D  
Sbjct: 1   MADDGSASNRRDPIKSSVGNVAGQRRRKQAVTVAKERRELLVRAKRLCRVGTNGDVEDAL 60

Query: 61  LENEMMMDEEVSILEVQTSSAVDELKSAVAYQGKGAMQKRIHALRELRRLLSRSEFPPVE 120
           +ENEMM+DEE  ILE Q S +V+ELKSAV YQGKGAMQKR+ ALRELRRLLS+SEFPPVE
Sbjct: 61  VENEMMVDEEQPILEAQASKSVEELKSAVQYQGKGAMQKRVTALRELRRLLSKSEFPPVE 120

Query: 121 AALKAGAVSLLVQCLSFGSSDEQLLEAAWCLTNIGAGKPEETKSLMPALPLLIAHLGEKS 180
           AAL+AGA+ LLVQCLSFGS DEQLLE+AWCLTNI AGKPEETK+L+PALPLLIAHLGEKS
Sbjct: 121 AALRAGAIPLLVQCLSFGSPDEQLLESAWCLTNIAAGKPEETKALLPALPLLIAHLGEKS 180

Query: 181 SLLVAEQCAWALGNVAGEEMELRNILLSQGALLPLARMLFPNKGSSVKTAAWALSNLIKG 240
           S  VAEQCAWA+GNVAGE  +LRN+LLSQGAL PLARM+FP+KGS+V+TAAWALSNLIKG
Sbjct: 181 SAPVAEQCAWAIGNVAGEGEDLRNVLLSQGALPPLARMIFPDKGSTVRTAAWALSNLIKG 240

Query: 241 PDSRAATELIKIDGVLDAIIRHLGKADDELATEVAWVIVYLSALSNVATSILVKSEVLQL 300
           P+S+AA +L+KIDG+LDAI+RHL K D+E ATE+AW+IVYLSALS++ATS+L+K  +LQL
Sbjct: 241 PESKAAAQLVKIDGILDAILRHLKKTDEETATEIAWIIVYLSALSDIATSMLLKGGILQL 300

Query: 301 LVERLSTSNSLQLLIP-------------------------------------------- 360
           L++RL+TS+SLQLLIP                                            
Sbjct: 301 LIDRLATSSSLQLLIPVLRSLGNFVAVDPKAVLTILIREQNTEESIIGVLAKCLRSEHRV 360

Query: 361 ---EASWVLSNIAAGSMEHKQLIYISDAVPLLIRLLSSAPFDVRKEVAYVLGNLCAAPDE 420
              EA+WVLSNIAAGS+EHK++I+ ++ +PLL+R+LS++PFD+RKEVAYVLGNLC    E
Sbjct: 361 LKKEAAWVLSNIAAGSIEHKRMIHSTEVMPLLLRILSTSPFDIRKEVAYVLGNLCVESAE 420

Query: 421 SGEGKPKLLVENLVSLVGKGCLPGFIDLVRSADTEAARLGFQFLELVLRGMPNGEGPRLV 468
            G+ KP+++ E+LVS+V  GCL GFI+LVRS D EAARLG QF+ELVLRGMPNGEGP+LV
Sbjct: 421 -GDRKPRIIQEHLVSIVSGGCLRGFIELVRSPDIEAARLGLQFIELVLRGMPNGEGPKLV 480

[Close]

BLAST of CmaCh06G003630 vs. TAIR 10
Match: AT2G47330.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 237.7 bits (605), Expect = 4.6e-62
Identity = 155/449 (34.52%), Postives = 236/449 (52.56%), Query Frame = 0


Query: 558 PSENDPSEERKEFHRKLERDAL-YRKKYNIHVSGNNVPSPLQNFAELSTRYECDPYILHN 617
           P   D  EE +      E++   YR++  I VSG +V  P++ F +     +    I+  
Sbjct: 187 PINKDFYEELESISGMTEQETTDYRQRLGIRVSGFDVHRPVKTFEDCGFSSQ----IMSA 246

Query: 618 LVELGFKEPTPIQRQAIPVLLSGRECFACAPTGSGKTLAFLCPVLMKLKDPSK----EGI 677
           + +  +++PT IQ QA+P++LSGR+    A TGSGKT AF+ P+++ + D  +    EG 
Sbjct: 247 IKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIMDQPELQRDEGP 306

Query: 678 RAVILCPTRELASQTTRECKKLAKGKKFSIKLVTKEVIRHADFS--KFSCDVLISTPLRL 737
             VI  PTRELA Q   E KK +K     +  V   + +H  F   K  C+++++TP RL
Sbjct: 307 IGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAGCEIVVATPGRL 366

Query: 738 RLAIRKKKIDLSRVEHLVLDESDKLFELGLLKQIDTIVKACSNPSIVRSLFSATLPDFVE 797
              ++ K + + R  +LVLDE+D++F+LG   Q+ +IV     P     LFSAT+P  VE
Sbjct: 367 IDMLKMKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQI-RPDRQTLLFSATMPWKVE 426

Query: 798 DLARSVMHDAVRVIVGRKNTASETVKQKLVFAGSEEGKLLALRQSFSESLNP-PVLIFVQ 857
            LAR ++ D +RV VG    A+E + Q +    S+  KL  L +     ++   VL+F  
Sbjct: 427 KLAREILSDPIRVTVGEVGMANEDITQVVNVIPSDAEKLPWLLEKLPGMIDEGDVLVFAS 486

Query: 858 SKERAKDLYGELAFENIKVNVIHSDLSEIERENVVYDFRAGKTWVLIATDVIARGMDFKG 917
            K    ++  +L   + KV  +H D  +  R   +  F++G   VLIATDV ARG+D K 
Sbjct: 487 KKATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVLIATDVAARGLDIKS 546

Query: 918 VNCVINYDFPDSASAYIHRIGRSGRAG-RSGEAITFYTDEDIPFLRNIANVMSASGCEVP 977
           +  V+NYD       ++HRIGR+GRAG R G A T  T  +  F   + N + A+G  VP
Sbjct: 547 LKTVVNYDIAKDMDMHVHRIGRTGRAGDRDGVAYTLVTQREARFAGELVNSLVAAGQNVP 606

Query: 978 SWITELQKKKWKKHRPKRDSISNKPKDDG 998
             +T+L  K   + + KRD      K  G
Sbjct: 607 PELTDLAMKD-GRFKSKRDGRKGGKKGRG 629

[Close]

BLAST of CmaCh06G003630 vs. TAIR 10
Match: AT3G58570.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 235.3 bits (599), Expect = 2.3e-61
Identity = 145/407 (35.63%), Postives = 221/407 (54.30%), Query Frame = 0


Query: 586 IHVSGNNVPSPLQNFAELSTRYECDPYILHNLVELGFKEPTPIQRQAIPVLLSGRECFAC 645
           I  SG+NVP P+  FAE+    +    +  N+    + +PTP+QR AIP+L +GR+  AC
Sbjct: 134 IETSGDNVPPPVNTFAEI----DLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRDLMAC 193

Query: 646 APTGSGKTLAFLCPVLMK-LKDPSKE---GIR-----AVILCPTRELASQTTRECKKLA- 705
           A TGSGKT AF  P++   +KD   E   G+R     AVIL PTRELA Q   E +K + 
Sbjct: 194 AQTGSGKTAAFCFPIISGIMKDQHIERPRGVRGVYPLAVILSPTRELACQIHDEARKFSY 253

Query: 706 -KGKKFSIKLVTKEVIRHADFSKFSCDVLISTPLRLRLAIRKKKIDLSRVEHLVLDESDK 765
             G K  +      V +     +   D+L++TP RL   + + ++ L  V  L LDE+D+
Sbjct: 254 QTGVKVVVAYGGTPVNQQIRELERGVDILVATPGRLNDLLERGRVSLQMVRFLALDEADR 313

Query: 766 LFELGLLKQIDTIVKACSNPSI-VRS--LFSATLPDFVEDLARSVMHDAVRVIVGRKNTA 825
           + ++G   QI  IV+    P   VR   LFSAT P  ++ LA   + + + + VGR  ++
Sbjct: 314 MLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPREIQRLASDFLSNYIFLAVGRVGSS 373

Query: 826 SETVKQKLVFAGSEEGK------LLALRQSFSESLNPPVLIFVQSKERAKDLYGELAFEN 885
           ++ + Q++ F    + +      L A R++ ++      L+FV++K+ A  L   L    
Sbjct: 374 TDLIVQRVEFVHDSDKRSHLMDLLHAQRENGNQGKQALTLVFVETKKGADSLENWLCING 433

Query: 886 IKVNVIHSDLSEIERENVVYDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSASAY 945
                IH D S+ ERE  +  F+ G+T +L+ATDV ARG+D   V  V+N+D P+    Y
Sbjct: 434 FPATTIHGDRSQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDY 493

Query: 946 IHRIGRSGRAGRSGEAITFYTDEDIPFLRNIANVMSASGCEVPSWIT 973
           +HRIGR+GRAG SG A  F+ D +    + +A +M  +  EVP W+T
Sbjct: 494 VHRIGRTGRAGNSGLATAFFNDNNTTMAKPLAELMQEANQEVPDWLT 536

[Close]

BLAST of CmaCh06G003630 vs. TAIR 10
Match: AT2G42520.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 233.4 bits (594), Expect = 8.6e-61
Identity = 153/442 (34.62%), Postives = 234/442 (52.94%), Query Frame = 0


Query: 555 ENHPSENDPSEERKEFHRK----LERDALYRKKYNIHVSGNNVPSPLQNFAELSTRYECD 614
           E +P END SE    F  +    +  DA   +   I  SG+NVP P+  FAE+    +  
Sbjct: 114 EVNPFENDDSEPEPAFTEQDNTVINFDAY--EDIPIETSGDNVPPPVNTFAEI----DLG 173

Query: 615 PYILHNLVELGFKEPTPIQRQAIPVLLSGRECFACAPTGSGKTLAFLCPVLMK-LKDPSK 674
             +  N+    + +PTP+QR AIP+LL GR+  ACA TGSGKT AF  P++   +KD   
Sbjct: 174 EALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPIISGIMKDQHV 233

Query: 675 EGIR--------AVILCPTRELASQTTRECKKLA--KGKKFSIKLVTKEVIRHADFSKFS 734
           +  R        AVIL PTRELASQ   E KK +   G K  +      + +     +  
Sbjct: 234 QRPRGSRTVYPLAVILSPTRELASQIHDEAKKFSYQTGVKVVVAYGGTPINQQLRELERG 293

Query: 735 CDVLISTPLRLRLAIRKKKIDLSRVEHLVLDESDKLFELGLLKQIDTIVKACSNPSI-VR 794
            D+L++TP RL   + + ++ +  +  L LDE+D++ ++G   QI  IV+    P   VR
Sbjct: 294 VDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVR 353

Query: 795 S--LFSATLPDFVEDLARSVMHDAVRVIVGRKNTASETVKQKLVFAGSEEGK------LL 854
              LFSAT P  ++ LA   + + + + VGR  ++++ + Q++ F    + +      L 
Sbjct: 354 QTLLFSATFPREIQRLAADFLANYIFLAVGRVGSSTDLIVQRVEFVLDSDKRSHLMDLLH 413

Query: 855 ALRQSFSESLNPPVLIFVQSKERAKDLYGELAFENIKVNVIHSDLSEIERENVVYDFRAG 914
           A R++  +      L+FV++K  A  L   L         IH D ++ ERE  +  F++G
Sbjct: 414 AQRENGIQGKQALTLVFVETKRGADSLENWLCINGFPATSIHGDRTQQEREVALKAFKSG 473

Query: 915 KTWVLIATDVIARGMDFKGVNCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTDEDI 973
           +T +L+ATDV ARG+D   V  V+N+D P+    Y+HRIGR+GRAG+SG A  F+ D + 
Sbjct: 474 RTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNDGNT 533

The following BLAST results are available for this feature:

BLAST of CmaCh06G003630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84TG1	3.5e-208	69.53	DEAD-box ATP-dependent RNA helicase 57 OS=Arabidopsis thaliana OX=3702 GN=RH57 P...	[more]
Q5K5B6	1.4e-193	64.25	DEAD-box ATP-dependent RNA helicase 57 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
F4KF65	6.2e-189	67.18	Importin subunit alpha-9 OS=Arabidopsis thaliana OX=3702 GN=IMPA9 PE=3 SV=1	[more]
Q9FYP9	3.2e-161	61.61	Importin subunit alpha-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g015800...	[more]
Q99PT0	1.1e-116	42.61	Probable ATP-dependent RNA helicase DDX52 OS=Rattus norvegicus OX=10116 GN=Ddx52...	[more]

BLAST of CmaCh06G003630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A498IET9	0.0e+00	73.03	Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_004588 PE=4 SV=1	[more]
A0A6J1KU60	0.0e+00	100.00	DEAD-box ATP-dependent RNA helicase 57 OS=Cucurbita maxima OX=3661 GN=LOC1114986...	[more]
A0A6J1G4H0	0.0e+00	96.88	DEAD-box ATP-dependent RNA helicase 57 OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A0A0LAD5	2.5e-294	86.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G736920 PE=4 SV=1	[more]
A0A5A7TRJ2	2.4e-289	85.41	DEAD-box ATP-dependent RNA helicase 57 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]

BLAST of CmaCh06G003630 vs. NCBI nr


Match Name	E-value	Identity	Description
RXH80674.1	0.0e+00	73.03	hypothetical protein DVH24_004588 [Malus domestica]	[more]
XP_023005802.1	0.0e+00	100.00	DEAD-box ATP-dependent RNA helicase 57 [Cucurbita maxima]	[more]
XP_023540379.1	0.0e+00	99.04	DEAD-box ATP-dependent RNA helicase 57 [Cucurbita pepo subsp. pepo]	[more]
KAG6596460.1	0.0e+00	96.96	DEAD-box ATP-dependent RNA helicase 57, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_022946645.1	0.0e+00	96.88	DEAD-box ATP-dependent RNA helicase 57 [Cucurbita moschata]	[more]

BLAST of CmaCh06G003630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09720.1	2.5e-209	69.53	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT5G03070.1	4.4e-190	67.18	importin alpha isoform 9	[more]
AT2G47330.1	4.6e-62	34.52	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT3G58570.1	2.3e-61	35.63	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT2G42520.1	8.6e-61	34.62	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000225	Armadillo	SMART	SM00185	arm_5	coord: 281..323 e-value: 52.0 score: 7.7 coord: 154..193 e-value: 33.0 score: 9.2 coord: 110..152 e-value: 0.012 score: 24.8 coord: 325..365 e-value: 4.3E-4 score: 29.6 coord: 195..235 e-value: 0.23 score: 20.5 coord: 239..279 e-value: 11.0 score: 12.9
IPR000225	Armadillo	PFAM	PF00514	Arm	coord: 114..150 e-value: 1.1E-5 score: 25.3 coord: 327..365 e-value: 1.3E-6 score: 28.2
IPR000225	Armadillo	PROSITE	PS50176	ARM_REPEAT	coord: 292..332 score: 8.5574
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 621..818 e-value: 1.1E-48 score: 177.7
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 633..803 score: 27.585661
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 855..936 e-value: 3.3E-30 score: 116.3
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 830..936 e-value: 8.8E-28 score: 96.9
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 814..975 score: 23.375698
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 70..461 e-value: 2.3E-82 score: 278.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 811..1076 e-value: 1.1E-50 score: 174.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 577..810 e-value: 1.3E-70 score: 239.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 671..956
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 626..791 e-value: 7.5E-38 score: 130.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 974..1093
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 551..570
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 988..1004
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1016..1059
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1069..1093
None	No IPR available	PANTHER	PTHR47958:SF27	DEAD-BOX ATP-DEPENDENT RNA HELICASE 57	coord: 470..991
None	No IPR available	PANTHER	PTHR47958	ATP-DEPENDENT RNA HELICASE DBP3	coord: 470..991
None	No IPR available	CDD	cd18787	SF2_C_DEAD	coord: 815..945 e-value: 2.65267E-53 score: 180.396
IPR014014	RNA helicase, DEAD-box type, Q motif	PROSITE	PS51195	Q_MOTIF	coord: 602..630 score: 9.025831
IPR044764	DDX52/Rok1, DEAD-box helicase domain	CDD	cd17957	DEADc_DDX52	coord: 613..806 e-value: 2.98921E-98 score: 307.208
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 23..462

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G003630.1	CmaCh06G003630.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030490	maturation of SSU-rRNA
biological_process	GO:0006606	protein import into nucleus
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0061608	nuclear import signal receptor activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003724	RNA helicase activity