Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAGCTTCCCTTATGAAGATCCAAACCCTAACCCTAACCCTAATTTCACGCAATTCTCCCCAATTCTCGACCCCGCTTCCTTCTTCGACTTCGATCTCTCCAATTTCCTCGTCGGCGATGACGATAGCTACGTTGACCAACTCGCCTCCTCGTCTTCGGAGAAGATCACCGGCGTGGACAGTGGCGGTAGTAGTGTGGCAGTGGACAGCGGATCTAGCTTCGTGGTTTCATCGGAGCCGTCGCCATCCATGCAAGTGGCTTAA
mRNA sequence
ATGGCGAGCTTCCCTTATGAAGATCCAAACCCTAACCCTAACCCTAATTTCACGCAATTCTCCCCAATTCTCGACCCCGCTTCCTTCTTCGACTTCGATCTCTCCAATTTCCTCGTCGGCGATGACGATAGCTACGTTGACCAACTCGCCTCCTCGTCTTCGGAGAAGATCACCGGCGTGGACAGTGGCGGTAGTAGTGTGGCAGTGGACAGCGGATCTAGCTTCGTGGTTTCATCGGAGCCGTCGCCATCCATGCAAGTGGCTTAA
Coding sequence (CDS)
ATGGCGAGCTTCCCTTATGAAGATCCAAACCCTAACCCTAACCCTAATTTCACGCAATTCTCCCCAATTCTCGACCCCGCTTCCTTCTTCGACTTCGATCTCTCCAATTTCCTCGTCGGCGATGACGATAGCTACGTTGACCAACTCGCCTCCTCGTCTTCGGAGAAGATCACCGGCGTGGACAGTGGCGGTAGTAGTGTGGCAGTGGACAGCGGATCTAGCTTCGTGGTTTCATCGGAGCCGTCGCCATCCATGCAAGTGGCTTAA
Protein sequence
MASFPYEDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDDSYVDQLASSSSEKITGVDSGGSSVAVDSGSSFVVSSEPSPSMQVA
Homology
BLAST of CmoCh20G011370 vs. ExPASy TrEMBL
Match:
A0A6J1EIN3 (probable WRKY transcription factor 51 OS=Cucurbita moschata OX=3662 GN=LOC111434887 PE=4 SV=1)
HSP 1 Score: 162.2 bits (409), Expect = 1.0e-36
Identity = 84/86 (97.67%), Postives = 86/86 (100.00%), Query Frame = 0
Query: 1 MASFPYEDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDDSYVDQLASSSSEKITGV 60
MASFPYEDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDDSYVDQLASSSSEKITGV
Sbjct: 1 MASFPYEDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDDSYVDQLASSSSEKITGV 60
Query: 61 DSGGSSVAVDSGSSFVVSSEPSPSMQ 87
DSGGSSVAVDSGSSFVVSSEPSPS++
Sbjct: 61 DSGGSSVAVDSGSSFVVSSEPSPSIR 86
BLAST of CmoCh20G011370 vs. ExPASy TrEMBL
Match:
A0A6J1I2S4 (probable WRKY transcription factor 51 OS=Cucurbita maxima OX=3661 GN=LOC111470401 PE=4 SV=1)
HSP 1 Score: 159.8 bits (403), Expect = 5.1e-36
Identity = 83/86 (96.51%), Postives = 85/86 (98.84%), Query Frame = 0
Query: 1 MASFPYEDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDDSYVDQLASSSSEKITGV 60
MASFPYEDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDDSYVDQLASSSSEKI GV
Sbjct: 1 MASFPYEDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDDSYVDQLASSSSEKIIGV 60
Query: 61 DSGGSSVAVDSGSSFVVSSEPSPSMQ 87
DSGGSSVAVDSGSSFVVSSEPSPS++
Sbjct: 61 DSGGSSVAVDSGSSFVVSSEPSPSIR 86
BLAST of CmoCh20G011370 vs. ExPASy TrEMBL
Match:
A0A6J1E1D1 (probable WRKY transcription factor 51 OS=Momordica charantia OX=3673 GN=LOC111025535 PE=4 SV=1)
HSP 1 Score: 98.6 bits (244), Expect = 1.4e-17
Identity = 59/92 (64.13%), Postives = 68/92 (73.91%), Query Frame = 0
Query: 1 MASFPYEDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDD--SYVDQLASS-----S 60
MASFP +DPNPNPNPN+T F PILDP+ FFDFDLS++L+ +DD + DQ ASS S
Sbjct: 1 MASFPQQDPNPNPNPNYTHFPPILDPSVFFDFDLSDYLMLNDDNINIDDQAASSSPSIAS 60
Query: 61 SEKITGVDSGGSSVAVDSGSSFVVSSEPSPSM 86
SEKITGVDSG S VDSGSS V SS + SM
Sbjct: 61 SEKITGVDSGNSCAVVDSGSSTVASSGATSSM 92
BLAST of CmoCh20G011370 vs. ExPASy TrEMBL
Match:
A0A6J1DV80 (probable WRKY transcription factor 51 OS=Momordica charantia OX=3673 GN=LOC111024371 PE=4 SV=1)
HSP 1 Score: 98.6 bits (244), Expect = 1.4e-17
Identity = 59/92 (64.13%), Postives = 68/92 (73.91%), Query Frame = 0
Query: 1 MASFPYEDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDD--SYVDQLASS-----S 60
MASFP +DPNPNPNPN+T F PILDP+ FFDFDLS++L+ +DD + DQ ASS S
Sbjct: 1 MASFPQQDPNPNPNPNYTHFPPILDPSVFFDFDLSDYLMLNDDNINIDDQAASSSPSIAS 60
Query: 61 SEKITGVDSGGSSVAVDSGSSFVVSSEPSPSM 86
SEKITGVDSG S VDSGSS V SS + SM
Sbjct: 61 SEKITGVDSGNSCAVVDSGSSTVASSGATSSM 92
BLAST of CmoCh20G011370 vs. ExPASy TrEMBL
Match:
A0A0A0LM41 (WRKY domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G297180 PE=4 SV=1)
HSP 1 Score: 94.4 bits (233), Expect = 2.6e-16
Identity = 63/96 (65.62%), Postives = 73/96 (76.04%), Query Frame = 0
Query: 1 MASFPYEDPNPNPNP---NFTQFSPILDPASFFDFDLSNFLV-GDDDS-YVDQLASS--- 60
MASFPYED N NPNP N+T F PILDPASFFDF+LS+FL+ GDD++ VDQ+ASS
Sbjct: 1 MASFPYEDSNLNPNPNPNNYTHFPPILDPASFFDFELSDFLLFGDDNNIVVDQVASSSPS 60
Query: 61 --SSEKIT--GVDSGGSSVAVDSGSSFVVSSEPSPS 85
SSEKIT GVDSGGSS +D+GSS VVSS + S
Sbjct: 61 MTSSEKITSGGVDSGGSSTVIDTGSSVVVSSSGARS 96
BLAST of CmoCh20G011370 vs. NCBI nr
Match:
KAG6571381.1 (hypothetical protein SDJN03_30296, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 167.9 bits (424), Expect = 3.8e-38
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0
Query: 1 MASFPYEDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDDSYVDQLASSSSEKITGV 60
MASFPYEDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDDSYVDQLASSSSEKITGV
Sbjct: 1 MASFPYEDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDDSYVDQLASSSSEKITGV 60
Query: 61 DSGGSSVAVDSGSSFVVSSEPSPSMQVA 89
DSGGSSVAVDSGSSFVVSSEPSPSMQVA
Sbjct: 61 DSGGSSVAVDSGSSFVVSSEPSPSMQVA 88
BLAST of CmoCh20G011370 vs. NCBI nr
Match:
XP_022927982.1 (probable WRKY transcription factor 51 [Cucurbita moschata])
HSP 1 Score: 162.2 bits (409), Expect = 2.1e-36
Identity = 84/86 (97.67%), Postives = 86/86 (100.00%), Query Frame = 0
Query: 1 MASFPYEDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDDSYVDQLASSSSEKITGV 60
MASFPYEDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDDSYVDQLASSSSEKITGV
Sbjct: 1 MASFPYEDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDDSYVDQLASSSSEKITGV 60
Query: 61 DSGGSSVAVDSGSSFVVSSEPSPSMQ 87
DSGGSSVAVDSGSSFVVSSEPSPS++
Sbjct: 61 DSGGSSVAVDSGSSFVVSSEPSPSIR 86
BLAST of CmoCh20G011370 vs. NCBI nr
Match:
XP_022971732.1 (probable WRKY transcription factor 51 [Cucurbita maxima])
HSP 1 Score: 159.8 bits (403), Expect = 1.0e-35
Identity = 83/86 (96.51%), Postives = 85/86 (98.84%), Query Frame = 0
Query: 1 MASFPYEDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDDSYVDQLASSSSEKITGV 60
MASFPYEDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDDSYVDQLASSSSEKI GV
Sbjct: 1 MASFPYEDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDDSYVDQLASSSSEKIIGV 60
Query: 61 DSGGSSVAVDSGSSFVVSSEPSPSMQ 87
DSGGSSVAVDSGSSFVVSSEPSPS++
Sbjct: 61 DSGGSSVAVDSGSSFVVSSEPSPSIR 86
BLAST of CmoCh20G011370 vs. NCBI nr
Match:
XP_023512174.1 (probable WRKY transcription factor 51 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 158.7 bits (400), Expect = 2.3e-35
Identity = 82/86 (95.35%), Postives = 85/86 (98.84%), Query Frame = 0
Query: 1 MASFPYEDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDDSYVDQLASSSSEKITGV 60
MASFPYEDPNPNPNPNF QFSPILDPASFFDFDLSNFLVGDDDSYVDQLASSSSEKITG+
Sbjct: 1 MASFPYEDPNPNPNPNFMQFSPILDPASFFDFDLSNFLVGDDDSYVDQLASSSSEKITGM 60
Query: 61 DSGGSSVAVDSGSSFVVSSEPSPSMQ 87
DSGGSSVAVDSGSSFVVSSEPSPS++
Sbjct: 61 DSGGSSVAVDSGSSFVVSSEPSPSIR 86
BLAST of CmoCh20G011370 vs. NCBI nr
Match:
KAG7011149.1 (putative WRKY transcription factor 51, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 153.3 bits (386), Expect = 9.8e-34
Identity = 80/81 (98.77%), Postives = 80/81 (98.77%), Query Frame = 0
Query: 1 MASFPYEDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDDSYVDQLASSSSEKITGV 60
MASFP EDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDDSYVDQLASSSSEKITGV
Sbjct: 1 MASFPIEDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDDSYVDQLASSSSEKITGV 60
Query: 61 DSGGSSVAVDSGSSFVVSSEP 82
DSGGSSVAVDSGSSFVVSSEP
Sbjct: 61 DSGGSSVAVDSGSSFVVSSEP 81
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1EIN3 | 1.0e-36 | 97.67 | probable WRKY transcription factor 51 OS=Cucurbita moschata OX=3662 GN=LOC111434... | [more] |
| A0A6J1I2S4 | 5.1e-36 | 96.51 | probable WRKY transcription factor 51 OS=Cucurbita maxima OX=3661 GN=LOC11147040... | [more] |
| A0A6J1E1D1 | 1.4e-17 | 64.13 | probable WRKY transcription factor 51 OS=Momordica charantia OX=3673 GN=LOC11102... | [more] |
| A0A6J1DV80 | 1.4e-17 | 64.13 | probable WRKY transcription factor 51 OS=Momordica charantia OX=3673 GN=LOC11102... | [more] |
| A0A0A0LM41 | 2.6e-16 | 65.63 | WRKY domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G297180 PE=4 S... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAG6571381.1 | 3.8e-38 | 100.00 | hypothetical protein SDJN03_30296, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| XP_022927982.1 | 2.1e-36 | 97.67 | probable WRKY transcription factor 51 [Cucurbita moschata] | [more] |
| XP_022971732.1 | 1.0e-35 | 96.51 | probable WRKY transcription factor 51 [Cucurbita maxima] | [more] |
| XP_023512174.1 | 2.3e-35 | 95.35 | probable WRKY transcription factor 51 [Cucurbita pepo subsp. pepo] | [more] |
| KAG7011149.1 | 9.8e-34 | 98.77 | putative WRKY transcription factor 51, partial [Cucurbita argyrosperma subsp. ar... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
