Homology
BLAST of CmoCh20G011160 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 175.6 bits (444), Expect = 1.5e-42
Identity = 84/197 (42.64%), Postives = 122/197 (61.93%), Query Frame = 0
Query: 366 FEEAMQEEMTSITENQTWSLEDMPPGH-RAIGLKWVFKLKRNEKGEVVKHKARLVAKGYV 425
+ AM E+ + N TW L PP H +G +W+F K N G + ++KARLVAKGY
Sbjct: 968 WRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGYN 1027
Query: 426 QKQGVDFEEVFAPAARLESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETVYVRQPPGF 485
Q+ G+D+ E F+P + S+R +L +A SW + +DV +AFL G L + VY+ QPPGF
Sbjct: 1028 QRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGF 1087
Query: 486 LDNDNPNKVLRLHKALCGLQQAPRAWNAKLDSTLLSLNFKRCASEHDMYTYGHGKKRLIV 545
+D D PN V +L KAL GL+QAPRAW +L + LL++ F S+ ++ GK + +
Sbjct: 1088 IDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYM 1147
Query: 546 GVYVDNLIITGGDVGVL 562
VYVD+++ITG D +L
Sbjct: 1148 LVYVDDILITGNDPTLL 1164
BLAST of CmoCh20G011160 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 169.1 bits (427), Expect = 1.4e-40
Identity = 81/197 (41.12%), Postives = 122/197 (61.93%), Query Frame = 0
Query: 366 FEEAMQEEMTSITENQTWSL-EDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGYV 425
+ +AM E+ + N TW L PP +G +W+F K N G + ++KARLVAKGY
Sbjct: 951 WRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGYN 1010
Query: 426 QKQGVDFEEVFAPAARLESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETVYVRQPPGF 485
Q+ G+D+ E F+P + S+R +L +A SW + +DV +AFL G L + VY+ QPPGF
Sbjct: 1011 QRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGF 1070
Query: 486 LDNDNPNKVLRLHKALCGLQQAPRAWNAKLDSTLLSLNFKRCASEHDMYTYGHGKKRLIV 545
+D D P+ V RL KA+ GL+QAPRAW +L + LL++ F S+ ++ G+ + +
Sbjct: 1071 VDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYM 1130
Query: 546 GVYVDNLIITGGDVGVL 562
VYVD+++ITG D +L
Sbjct: 1131 LVYVDDILITGNDTVLL 1147
BLAST of CmoCh20G011160 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 166.8 bits (421), Expect = 7.1e-40
Identity = 82/195 (42.05%), Postives = 133/195 (68.21%), Query Frame = 0
Query: 368 EAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQ 427
+AMQEEM S+ +N T+ L ++P G R + KWVFKLK++ ++V++KARLV KG+ QK+
Sbjct: 828 KAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKK 887
Query: 428 GVDFEEVFAPAARLESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETVYVRQPPGFLDN 487
G+DF+E+F+P ++ S+R +L++AA EV +DVK+AFL+G+L+E +Y+ QP GF
Sbjct: 888 GIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVA 947
Query: 488 DNPNKVLRLHKALCGLQQAPRAWNAKLDSTLLSLNFKRCASEHDMYTYGHGKKR-LIVGV 547
+ V +L+K+L GL+QAPR W K DS + S + + S+ +Y + +I+ +
Sbjct: 948 GKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLL 1007
Query: 548 YVDNLIITGGDVGVL 562
YVD+++I G D G++
Sbjct: 1008 YVDDMLIVGKDKGLI 1022
BLAST of CmoCh20G011160 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 153.3 bits (386), Expect = 8.2e-36
Identity = 76/195 (38.97%), Postives = 119/195 (61.03%), Query Frame = 0
Query: 366 FEEAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQ 425
+EEA+ E+ + N TW++ P + +WVF +K NE G +++KARLVA+G+ Q
Sbjct: 906 WEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQ 965
Query: 426 KQGVDFEEVFAPAARLESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETVYVRQPPGFL 485
K +D+EE FAP AR+ S RF+L++ ++ +VH MDVK+AFLNG LKE +Y+R P G
Sbjct: 966 KYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGI- 1025
Query: 486 DNDNPNKVLRLHKALCGLQQAPRAWNAKLDSTLLSLNFKRCASEHDMYTYGHG--KKRLI 545
+ N + V +L+KA+ GL+QA R W + L F + + +Y G + +
Sbjct: 1026 -SCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIY 1085
Query: 546 VGVYVDNLIITGGDV 559
V +YVD+++I GD+
Sbjct: 1086 VLLYVDDVVIATGDM 1098
BLAST of CmoCh20G011160 vs. ExPASy Swiss-Prot
Match:
P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)
HSP 1 Score: 86.7 bits (213), Expect = 9.4e-16
Identity = 38/93 (40.86%), Postives = 58/93 (62.37%), Query Frame = 0
Query: 461 MDVKSAFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALCGLQQAPRAWNAKLDSTLLS 520
MDV +AFLN + E +YV+QPPGF++ NP+ V L+ + GL+QAP WN +++TL
Sbjct: 1 MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60
Query: 521 LNFKRCASEHDMYTYGHGKKRLIVGVYVDNLII 554
+ F R EH +Y + + VYVD+L++
Sbjct: 61 IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLV 93
BLAST of CmoCh20G011160 vs. ExPASy TrEMBL
Match:
A0A5A7VC09 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold977G00080 PE=4 SV=1)
HSP 1 Score: 330.9 bits (847), Expect = 1.1e-86
Identity = 224/639 (35.05%), Postives = 329/639 (51.49%), Query Frame = 0
Query: 1 MVTSSSSKESSESWLIDNGYTNHITYDKESFEELRDTEDKRVRIGNGEHLEVKGKGTVAI 60
+VT ES+ESWLID+G TNH+T+DKE F++L+ T +V IGNG+++ VKGKGT+AI
Sbjct: 319 VVTCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITKVIIGNGDYISVKGKGTIAI 378
Query: 61 TSYEGTKFIPDVLFVPKIDQNLLSVGQLLDKGYKVLFENKQCLIKDASGKDLFNVKMEGK 120
S +GTK I DVLFVP I+QNLLSVGQL++KG+KV FEN+ CLIKDA+ +D+F VKM+GK
Sbjct: 379 ASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEYCLIKDAANQDIFKVKMKGK 438
Query: 121 SFALNP-----TAFILRVSATEIWHKKLTLSSSRGNKPYVVKIEGRGTILFVSKGGEHCK 180
SF+LNP + F L+ T++WHK++ +G + E +S+ CK
Sbjct: 439 SFSLNPLEEEQSVFALKEDETQLWHKRVGHYHHQG---LLQLTELALDFPKLSEEISSCK 498
Query: 181 LTDF------YFIPQARRTTNRLYILELEIDQP--------------------------- 240
F F + R T +L ++ ++ P
Sbjct: 499 ACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTTSLKGSLYYIAFIDDFTRMCWIFF 558
Query: 241 VSLSAKTEEVSWRWHARYGHLNFPALEETSPPPAGAPPEPVEFATPR-TADSTLDADHDT 300
+ ++ V W++ AR N ++ P V R + T H+
Sbjct: 559 LKFKSEVAHVFWKFKARVE--NESGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEK 618
Query: 301 DLEARYRMMDDLVGGGEPPGLAARELEEVTFAEAEK-------------------NPCWR 360
L ++ L + L+E T EA + P
Sbjct: 619 SLPKKFWAEAANTTVFLQNRLPTKALKEKTPFEAWRASPGVFIGYSSISKAYKIFQPQTG 678
Query: 361 KAMQEEMTSITENQTWSLEDM-PPGHRAIGLKWVF-----KLKRNEKGEVVKHKA----R 420
K + E++ W+ +D G +K+ F + + + + E+V + R
Sbjct: 679 KIIVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQNEIVDDASVRGTR 738
Query: 421 LVAKGYVQ--------------KQGVDFEEAMQEEMTSITENQTWSLEDMPPGHRAIGLK 480
L++ Y + K+ + AM+EE++ I +N+TW L D P + IG+K
Sbjct: 739 LLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILVDRPQDRKVIGVK 798
Query: 481 WVFKLKRNEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPAARLESVRFLLAIAAHHSWEV 540
WVF+ K N G + KHKARLV KGY Q GVD+ + FAP AR++++R L AIAA W++
Sbjct: 799 WVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDNFAPVARMDTIRLLFAIAAQKGWKL 858
Query: 541 HHMDVKSAFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALCGLQQAPRAWNAKLDSTL 558
+ +DVKSAFLNG L+E +YV QP G NKV L KAL GL+QAPRAW +K+D L
Sbjct: 859 YQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQAPRAWYSKIDEHL 918
BLAST of CmoCh20G011160 vs. ExPASy TrEMBL
Match:
A0A438JJ21 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Vitis vinifera OX=29760 GN=RE2_462 PE=4 SV=1)
HSP 1 Score: 326.2 bits (835), Expect = 2.6e-85
Identity = 220/607 (36.24%), Postives = 316/607 (52.06%), Query Frame = 0
Query: 3 TSSSSKESSESWLIDNGYTNHITYDKESFEELRDTEDKRVRIGNGEHLEVKGKGTVAITS 62
T ++ +SESWL+D+G TNH+TYD++ F E+ T +VRIGNGE++ VKGKGTVAI S
Sbjct: 309 TCFANGSTSESWLVDSGCTNHMTYDQDLFREIDRTAISKVRIGNGEYIPVKGKGTVAIES 368
Query: 63 YEGTKFIPDVLFVPKIDQNLLSVGQLLDKGYKVLFENKQCLIKDASGKDLFNVKMEGKSF 122
G K I DVLFVP IDQNLLSVGQ ++KG+KV FE+K C+IKDA G+++FN+KM+GKSF
Sbjct: 369 LTGLKLISDVLFVPDIDQNLLSVGQFVEKGFKVCFEDKNCIIKDAEGREVFNIKMKGKSF 428
Query: 123 ALN-----PTAFILRVSATEIWHKKLTLSSSRGNKPYVVK----IEGRGTI---LFVSKG 182
ALN A + T +WHK+ L N +K +EG + L +
Sbjct: 429 ALNMLEDEQIAAAQHENNTMLWHKR--LGHFHHNVVLYMKKNQIVEGLPDLEEELPICVA 488
Query: 183 GEHCKLTDFYFIPQ--ARRTTNRLYILELEIDQP------------VSLSAKTEEVSWRW 242
++ K T F PQ A ++T +L ++ ++ P ++ W +
Sbjct: 489 CQYGKQTRLPF-PQKAAWKSTQKLQLVHTDVSGPQKTPSLKGSKYYIAFVDDFTRFCWIY 548
Query: 243 HARYG------HLNFPALEETSPP---PAGAPPEPVEFATPRTADSTLDADHDTDLEARY 302
Y L + A+ E E+ + + DA D L A Y
Sbjct: 549 FLTYKSEVADVFLRYKAMVENQREYRIKVIRSDNGTEYTSEKFNKFCEDAGIDHQLTAPY 608
Query: 303 R------MMDDLVGGGEPPGLAARELEEVTFAEAEKNPCWRKAMQEEMTSITENQTWSLE 362
+ D + PG+ + A P K + E + WS +
Sbjct: 609 TPQQNGVVKRDKLDKKSEPGIFI-GYSNTSKAYRIYLPQNNKIVVSRDVKFLETEKWSWD 668
Query: 363 DMPPGH--------RAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQ-KQGVDFEEAMQE 422
+ + G + +F + + + A L G+V+ + + MQE
Sbjct: 669 EQNQQYIDEDVDELPIRGFRTLFDIYQR------CNIAVLEPAGFVEAAENKRWRVVMQE 728
Query: 423 EMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVDFE 482
E+ I +N TW L D P + IG+KWV++ K N G + KHKARLV KGY Q GVDF
Sbjct: 729 ELNMIDKNNTWELVDRPSHKKPIGVKWVYRTKLNSDGSINKHKARLVVKGYAQMFGVDFS 788
Query: 483 EVFAPAARLESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETVYVRQPPGFLDNDNPNK 542
E FAP ARL+++R LLA+AA W+++ +DVKSAFLNG L+E ++V QP GF K
Sbjct: 789 ETFAPVARLDTIRMLLALAAQRKWKIYQLDVKSAFLNGYLEEEIFVEQPEGFSIKGKEEK 848
Query: 543 VLRLHKALCGLQQAPRAWNAKLDSTLLSLNFKRCASEHDMYTYGHGKKRLIVGVYVDNLI 560
V L KAL GL+QAPRAW +++D+ LL+L F + SE +Y + LIV +YVD+L+
Sbjct: 849 VYLLKKALYGLRQAPRAWCSRIDTHLLTLGFHKSLSEFTLYIKKIEEDILIVSLYVDDLL 905
BLAST of CmoCh20G011160 vs. ExPASy TrEMBL
Match:
A0A438EE23 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=29760 GN=RE1_2689 PE=4 SV=1)
HSP 1 Score: 326.2 bits (835), Expect = 2.6e-85
Identity = 222/642 (34.58%), Postives = 320/642 (49.84%), Query Frame = 0
Query: 3 TSSSSKESSESWLIDNGYTNHITYDKESFEELRDTEDKRVRIGNGEHLEVKGKGTVAITS 62
T ++ +SESWL+D+G TNH+TYD+ F E+ T +V IGNGE++ VKGKGTVAI S
Sbjct: 176 TCFTNGSTSESWLVDSGCTNHMTYDQNLFREIDRTAISKVGIGNGEYIPVKGKGTVAIES 235
Query: 63 YEGTKFIPDVLFVPKIDQNLLSVGQLLDKGYKVLFENKQCLIKDASGKDLFNVKMEGKSF 122
G K I DVLFVP IDQNLLSVGQL++KG+KV FE+K C+IKDA G+++FN+KM+GKSF
Sbjct: 236 LTGLKLISDVLFVPDIDQNLLSVGQLVEKGFKVCFEDKNCIIKDAEGREVFNIKMKGKSF 295
Query: 123 ALN-----PTAFILRVSATEIWHKKLTLSSSRGNKPYVVK-IEGRGTILFVSKGGEHCKL 182
ALN A + T +WHK+L +K ++K +EGR KG
Sbjct: 296 ALNMLEDEQIAAAQHENNTMLWHKRLGHFHHFEDKNCIIKDVEGREVFNIKMKG------ 355
Query: 183 TDFYFIPQARRTTNRLYILELEIDQPVSLSAKTEEVSWRWHARYGHLN------------ 242
+ + L + D+ ++ +A+ E + WH R GH +
Sbjct: 356 --------------KSFALNMLEDEQIA-AAQHENNTMLWHKRLGHFHHNAVLYMKKNQI 415
Query: 243 ---FPALEETSPPPAGAP-------PEP---------------VEFATPRTADSTLDADH 302
P LEE P A P P + + P+ S + +
Sbjct: 416 VEGLPGLEEELPICAACQYGKQTRLPFPQKAAWKSTQKLQLVHTDVSGPQKTPSLKGSKY 475
Query: 303 ----------------------------------DTDLEARYRMMDDLVGGGEPPGL--- 362
+ E R ++ D + PG+
Sbjct: 476 YIAFIDDFTRFCWIYFLTYKSEVADVFLRYKSMVENQSEYRIKVKRDKLDKKSEPGIFIG 535
Query: 363 --AARELEEVTFAEAEKNPCWR--KAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKL 422
+ + + + K R K ++ E S E +++ G + +F +
Sbjct: 536 YSSTSKAYRIYLPQNNKIVVRRDVKFLETEKWSWDEQNQQYIDEDVDELPIRGFRTLFDI 595
Query: 423 KRNEKGEVVKHKARLVAKGYVQ-KQGVDFEEAMQEEMTSITENQTWSLEDMPPGHRAIGL 482
+ + A L G+V+ + + AMQEE+ I +N TW L D P + IG+
Sbjct: 596 YQR------CNIAVLEPAGFVEAAENKRWRVAMQEELNMIDKNNTWELVDRPSHKKPIGV 655
Query: 483 KWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPAARLESVRFLLAIAAHHSWE 542
KWV++ K N G + KHKARLV KGY Q GVDF E FAP ARL+++R LLA+AA W+
Sbjct: 656 KWVYRTKLNSDGSINKHKARLVVKGYAQMFGVDFSETFAPVARLDTIRMLLALAAQRKWK 715
Query: 543 VHHMDVKSAFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALCGLQQAPRAWNAKLDST 560
++ +D+KSAFLNG L+E ++V QP GF KV L KAL GL+QAPRAW ++D+
Sbjct: 716 IYQLDMKSAFLNGYLEEEIFVEQPEGFAIKGKEEKVYLLKKALYGLRQAPRAWYNRIDTH 775
BLAST of CmoCh20G011160 vs. ExPASy TrEMBL
Match:
A0A438CDR2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=29760 GN=RE1_927 PE=4 SV=1)
HSP 1 Score: 322.4 bits (825), Expect = 3.8e-84
Identity = 215/572 (37.59%), Postives = 307/572 (53.67%), Query Frame = 0
Query: 5 SSSKESSESWLIDNGYTNHITYDKESFEELRDTEDKRVRIGNGEHLEVKGKGTVAITSYE 64
++S SS+SWLID+G TNH+T D+E F+EL T +V+IGNGE + VKGKGTVAI S
Sbjct: 314 TTSNSSSDSWLIDSGCTNHMTNDQELFKELDKTIISKVKIGNGEFISVKGKGTVAIESLT 373
Query: 65 GTKFIPDVLFVPKIDQNLLSVGQLLDKGYKVLFENKQCLIKDASGKDLFNVKMEGKSFAL 124
G K+I DVL+VP IDQNLLSVGQL++KG+KV+FE+K C+IKDA G+D+F VKM KSFAL
Sbjct: 374 GLKYITDVLYVPDIDQNLLSVGQLIEKGFKVIFEDKWCMIKDAKGRDVFKVKMRAKSFAL 433
Query: 125 N-----PTAFILRVSATEIWHKKLTLSSSRG----NKPYVVKIEGRGTILFVSK-----G 184
N AF VS E+WH++L G K +VK G L K
Sbjct: 434 NLMEDEQIAFSSTVSNAELWHRRLGHFHHVGLLYMQKQNLVK----GVPLLEDKLADCVA 493
Query: 185 GEHCKLTDFYFIPQARRTTNRLYILELEIDQPVSL-SAKTEEVSWRWHARYGHLNFPALE 244
++ K T F A R ++L ++ ++ P S + + Y +
Sbjct: 494 CQYGKQTRRPFPQTAWRAMHKLQLVHTDVGGPQKTPSLNGSKYYIAFIDDYTRFCWIYFL 553
Query: 245 ETSPPPAGAPPEPVEFATPRTADSTLDADHDTDLEARYRMMDDLVGGGEPPGLAARELEE 304
++ A + + +++ D E + D E G+ +
Sbjct: 554 KSKSEVANVFWKYKAWVENQSSCRMQKIRSDNGKEYTNEIFDKFC---EEAGIEHQLTTP 613
Query: 305 VTFAE--AEKNPCWRKAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVV 364
T + +++ +KA QE++ E++ W+ E+ K++ + +
Sbjct: 614 YTPQQNGVKRDKLDKKAEQEDV-KFMEDRQWNWEES------------IKMQLPKVPQYF 673
Query: 365 KHKARLVAKGYVQKQGVD--FEEAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKR 424
V ++ D + EAM+EE+ I +N TW L D P + IG+KWV++ K
Sbjct: 674 DEDIDDVPVREFEEAEKDDKWIEAMKEELRMIEKNDTWELVDRPQHRKVIGVKWVYRTKL 733
Query: 425 NEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPAARLESVRFLLAIAAHHSWEVHHMDVKS 484
N G V K+KARLV KGY Q GVDF E FAP ARL+++R LLA+ A W+ + +DVKS
Sbjct: 734 NADGSVNKYKARLVVKGYSQVFGVDFSETFAPVARLDTIRMLLALTAQKGWKTYQLDVKS 793
Query: 485 AFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALCGLQQAPRAWNAKLDSTLLSLNFKR 544
AFLNG L+E +YV QP GF KV L KAL GL+QAPRAW +++D L SL F +
Sbjct: 794 AFLNGYLQEEIYVEQPEGFQVKGQEEKVYLLKKALYGLKQAPRAWYSRIDEHLQSLGFVK 853
Query: 545 CASEHDMYTYGHGKKRLIVGVYVDNLIITGGD 558
SE +Y G ++V VYVD+L++TG +
Sbjct: 854 SPSEATLYVKGTDANLIVVSVYVDDLLVTGSN 865
BLAST of CmoCh20G011160 vs. ExPASy TrEMBL
Match:
A0A438DQ73 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=29760 GN=RE1_3494 PE=4 SV=1)
HSP 1 Score: 322.0 bits (824), Expect = 4.9e-84
Identity = 218/613 (35.56%), Postives = 317/613 (51.71%), Query Frame = 0
Query: 5 SSSKESSESWLIDNGYTNHITYDKESFEELRDTEDKRVRIGNGEHLEVKGKGTVAITSYE 64
++S SS+SWLID+G TNH+T D+E F+EL T +V+IGNGE + VKGKGTVAI S
Sbjct: 191 TTSNSSSDSWLIDSGCTNHMTNDQELFKELDKTIISKVKIGNGEFISVKGKGTVAIESLT 250
Query: 65 GTKFIPDVLFVPKIDQNLLSVGQLLDKGYKVLFENKQCLIKDASGKDLFNVKMEGKSFAL 124
G K+I DVL+VP IDQNLLSVGQL++KG+KV+FE+K C+IKDA G+D+F VKM K FAL
Sbjct: 251 GLKYITDVLYVPDIDQNLLSVGQLIEKGFKVIFEDKWCMIKDAKGRDVFKVKMRAKGFAL 310
Query: 125 N-----PTAFILRVSATEIWHKKLTLSSSRG----NKPYVVKIEGRGTILFVSK-----G 184
N AF VS E+WH++L G K +VK G L K
Sbjct: 311 NLMEDEQIAFSSTVSNAELWHRRLGHFHHVGLLYMQKQNLVK----GVPLLEDKLADCVA 370
Query: 185 GEHCKLTDFYFIPQARRTTNRLYILELEIDQPVS-------------------------L 244
++ K T F A R ++L ++ ++ P L
Sbjct: 371 CQYGKQTRRPFPQTAWRAMHKLQLVHTDVGGPQKTPSLNGSKYYIAFIDDYTRFCWIYFL 430
Query: 245 SAKTE--EVSWRWHARYGHLNFPALEETSPPPAGAPPEPV------------EFATPRTA 304
+K+E V W++ A + + +++ + + TP T
Sbjct: 431 KSKSEVANVFWKYKAWVENQSSCRMQKIRSDNGKEYTNEIFDKFCEEAGIEHQLTTPYTP 490
Query: 305 DST------LDADHDTDLEARYRMMDDLVGGGEPPGLAARELEEVTFAEAEKNPCWRKAM 364
LD + + Y +P +V F E ++ W +++
Sbjct: 491 QQNGVKRDKLDKKAEPGVFIGYSNSSKAYRIFQPQNGKILVSRDVKFME-DRQWNWEESI 550
Query: 365 QEEMTSITENQTWSLEDMP-PGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQGV 424
+ ++ + + ++D+P G R++ + E+ V + A+ ++
Sbjct: 551 KMQLPKVPQYFDEDIDDVPVRGIRSLSDVY-------ERNNVAVFEP---AEFEEAEKDD 610
Query: 425 DFEEAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGYV 484
+ EAM+EE+ I +N TW L D P + IG+KWV++ K N G V K+KARLV KGY
Sbjct: 611 KWIEAMKEELRMIEKNDTWELVDRPQHRKVIGVKWVYRTKLNADGSVNKYKARLVVKGYS 670
Query: 485 QKQGVDFEEVFAPAARLESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETVYVRQPPGF 544
Q GVDF E FAP ARL+++R LLA+ A W+ + +DVKSAFLNG L++ +YV QP GF
Sbjct: 671 QVFGVDFSETFAPVARLDTIRMLLALTAQKGWKTYQLDVKSAFLNGYLQKEIYVEQPEGF 730
Query: 545 LDNDNPNKVLRLHKALCGLQQAPRAWNAKLDSTLLSLNFKRCASEHDMYTYGHGKKRLIV 558
KV L KAL GL+QAPRAW +++D L SL F + SE +Y G ++V
Sbjct: 731 QVKGQEEKVYLLKKALYGLKQAPRAWYSRIDEHLQSLGFVKSPSEATLYVKGTDANLIVV 788
BLAST of CmoCh20G011160 vs. NCBI nr
Match:
XP_023521510.1 (uncharacterized protein LOC111785335 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 332.8 bits (852), Expect = 5.7e-87
Identity = 201/384 (52.34%), Postives = 237/384 (61.72%), Query Frame = 0
Query: 230 ETSPPPAGAPPEPVEFATPRTADSTLDADHDTDLEARYRMMDDLVGGGEPPGLAARELEE 289
E SP A P+PVEFATPRTADSTLD DHD DL ARYR MDDLVGGGEPPGLA RELEE
Sbjct: 135 ELSPTSAAVTPKPVEFATPRTADSTLDVDHDDDLVARYRRMDDLVGGGEPPGLATRELEE 194
Query: 290 V------------TFAEAEKNPCWRKAMQEEMTSITEN----QTWSLEDMP-------PG 349
V TFA+AE+NPC K ++ S N +T ++ P PG
Sbjct: 195 VTELHAISTDEPNTFAKAERNPCCLKVHHMDVKSAFLNGELKETIDVQQPPGFLDNDNPG 254
Query: 350 HRAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVDFEEAMQEEMTSITEN------ 409
+ + +G +H+ V + V+F + T ++
Sbjct: 255 KNPNQFTVEYLITEPREGG-AQHRELSPTSAAVTPKPVEFATPRTADSTLDVDHDDDLVA 314
Query: 410 QTWSLEDM-----PPGHRAIGLKWVFKL------------------KRNEKGEVVKHKAR 469
+ ++D+ PPG L+ V +L R EKGEVVKHKA
Sbjct: 315 RYRRMDDLVGGGEPPGLATRELEEVTELHAIAQMNRTPSPKQKGTHARIEKGEVVKHKAH 374
Query: 470 LVAKGYVQKQGVDFEEVFAPAARLESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETVY 529
LVAKGY+ KQGVDFEEVFA RLE VR LL IA H SWEVHHMDVKS FLNGELKET+
Sbjct: 375 LVAKGYIPKQGVDFEEVFALVTRLEFVRLLLVIATHCSWEVHHMDVKSFFLNGELKETID 434
Query: 530 VRQPPGFLDNDNPNKVLRLHKALCGLQQAPRAWNAKLDSTLLSLNFKRCASEHDMYTYGH 562
V+QPPGFLDNDNP+KVLRLHKAL GL+QAPRAWNAKLDS LLS+ FK CASEH MYT+ H
Sbjct: 435 VQQPPGFLDNDNPSKVLRLHKALYGLRQAPRAWNAKLDSILLSVKFKCCASEHGMYTHDH 494
BLAST of CmoCh20G011160 vs. NCBI nr
Match:
KAA0063435.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 330.9 bits (847), Expect = 2.2e-86
Identity = 224/639 (35.05%), Postives = 329/639 (51.49%), Query Frame = 0
Query: 1 MVTSSSSKESSESWLIDNGYTNHITYDKESFEELRDTEDKRVRIGNGEHLEVKGKGTVAI 60
+VT ES+ESWLID+G TNH+T+DKE F++L+ T +V IGNG+++ VKGKGT+AI
Sbjct: 319 VVTCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITKVIIGNGDYISVKGKGTIAI 378
Query: 61 TSYEGTKFIPDVLFVPKIDQNLLSVGQLLDKGYKVLFENKQCLIKDASGKDLFNVKMEGK 120
S +GTK I DVLFVP I+QNLLSVGQL++KG+KV FEN+ CLIKDA+ +D+F VKM+GK
Sbjct: 379 ASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEYCLIKDAANQDIFKVKMKGK 438
Query: 121 SFALNP-----TAFILRVSATEIWHKKLTLSSSRGNKPYVVKIEGRGTILFVSKGGEHCK 180
SF+LNP + F L+ T++WHK++ +G + E +S+ CK
Sbjct: 439 SFSLNPLEEEQSVFALKEDETQLWHKRVGHYHHQG---LLQLTELALDFPKLSEEISSCK 498
Query: 181 LTDF------YFIPQARRTTNRLYILELEIDQP--------------------------- 240
F F + R T +L ++ ++ P
Sbjct: 499 ACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTTSLKGSLYYIAFIDDFTRMCWIFF 558
Query: 241 VSLSAKTEEVSWRWHARYGHLNFPALEETSPPPAGAPPEPVEFATPR-TADSTLDADHDT 300
+ ++ V W++ AR N ++ P V R + T H+
Sbjct: 559 LKFKSEVAHVFWKFKARVE--NESGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEK 618
Query: 301 DLEARYRMMDDLVGGGEPPGLAARELEEVTFAEAEK-------------------NPCWR 360
L ++ L + L+E T EA + P
Sbjct: 619 SLPKKFWAEAANTTVFLQNRLPTKALKEKTPFEAWRASPGVFIGYSSISKAYKIFQPQTG 678
Query: 361 KAMQEEMTSITENQTWSLEDM-PPGHRAIGLKWVF-----KLKRNEKGEVVKHKA----R 420
K + E++ W+ +D G +K+ F + + + + E+V + R
Sbjct: 679 KIIVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQNEIVDDASVRGTR 738
Query: 421 LVAKGYVQ--------------KQGVDFEEAMQEEMTSITENQTWSLEDMPPGHRAIGLK 480
L++ Y + K+ + AM+EE++ I +N+TW L D P + IG+K
Sbjct: 739 LLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILVDRPQDRKVIGVK 798
Query: 481 WVFKLKRNEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPAARLESVRFLLAIAAHHSWEV 540
WVF+ K N G + KHKARLV KGY Q GVD+ + FAP AR++++R L AIAA W++
Sbjct: 799 WVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDNFAPVARMDTIRLLFAIAAQKGWKL 858
Query: 541 HHMDVKSAFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALCGLQQAPRAWNAKLDSTL 558
+ +DVKSAFLNG L+E +YV QP G NKV L KAL GL+QAPRAW +K+D L
Sbjct: 859 YQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQAPRAWYSKIDEHL 918
BLAST of CmoCh20G011160 vs. NCBI nr
Match:
RVW46097.1 (Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera])
HSP 1 Score: 326.2 bits (835), Expect = 5.4e-85
Identity = 222/642 (34.58%), Postives = 320/642 (49.84%), Query Frame = 0
Query: 3 TSSSSKESSESWLIDNGYTNHITYDKESFEELRDTEDKRVRIGNGEHLEVKGKGTVAITS 62
T ++ +SESWL+D+G TNH+TYD+ F E+ T +V IGNGE++ VKGKGTVAI S
Sbjct: 176 TCFTNGSTSESWLVDSGCTNHMTYDQNLFREIDRTAISKVGIGNGEYIPVKGKGTVAIES 235
Query: 63 YEGTKFIPDVLFVPKIDQNLLSVGQLLDKGYKVLFENKQCLIKDASGKDLFNVKMEGKSF 122
G K I DVLFVP IDQNLLSVGQL++KG+KV FE+K C+IKDA G+++FN+KM+GKSF
Sbjct: 236 LTGLKLISDVLFVPDIDQNLLSVGQLVEKGFKVCFEDKNCIIKDAEGREVFNIKMKGKSF 295
Query: 123 ALN-----PTAFILRVSATEIWHKKLTLSSSRGNKPYVVK-IEGRGTILFVSKGGEHCKL 182
ALN A + T +WHK+L +K ++K +EGR KG
Sbjct: 296 ALNMLEDEQIAAAQHENNTMLWHKRLGHFHHFEDKNCIIKDVEGREVFNIKMKG------ 355
Query: 183 TDFYFIPQARRTTNRLYILELEIDQPVSLSAKTEEVSWRWHARYGHLN------------ 242
+ + L + D+ ++ +A+ E + WH R GH +
Sbjct: 356 --------------KSFALNMLEDEQIA-AAQHENNTMLWHKRLGHFHHNAVLYMKKNQI 415
Query: 243 ---FPALEETSPPPAGAP-------PEP---------------VEFATPRTADSTLDADH 302
P LEE P A P P + + P+ S + +
Sbjct: 416 VEGLPGLEEELPICAACQYGKQTRLPFPQKAAWKSTQKLQLVHTDVSGPQKTPSLKGSKY 475
Query: 303 ----------------------------------DTDLEARYRMMDDLVGGGEPPGL--- 362
+ E R ++ D + PG+
Sbjct: 476 YIAFIDDFTRFCWIYFLTYKSEVADVFLRYKSMVENQSEYRIKVKRDKLDKKSEPGIFIG 535
Query: 363 --AARELEEVTFAEAEKNPCWR--KAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKL 422
+ + + + K R K ++ E S E +++ G + +F +
Sbjct: 536 YSSTSKAYRIYLPQNNKIVVRRDVKFLETEKWSWDEQNQQYIDEDVDELPIRGFRTLFDI 595
Query: 423 KRNEKGEVVKHKARLVAKGYVQ-KQGVDFEEAMQEEMTSITENQTWSLEDMPPGHRAIGL 482
+ + A L G+V+ + + AMQEE+ I +N TW L D P + IG+
Sbjct: 596 YQR------CNIAVLEPAGFVEAAENKRWRVAMQEELNMIDKNNTWELVDRPSHKKPIGV 655
Query: 483 KWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPAARLESVRFLLAIAAHHSWE 542
KWV++ K N G + KHKARLV KGY Q GVDF E FAP ARL+++R LLA+AA W+
Sbjct: 656 KWVYRTKLNSDGSINKHKARLVVKGYAQMFGVDFSETFAPVARLDTIRMLLALAAQRKWK 715
Query: 543 VHHMDVKSAFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALCGLQQAPRAWNAKLDST 560
++ +D+KSAFLNG L+E ++V QP GF KV L KAL GL+QAPRAW ++D+
Sbjct: 716 IYQLDMKSAFLNGYLEEEIFVEQPEGFAIKGKEEKVYLLKKALYGLRQAPRAWYNRIDTH 775
BLAST of CmoCh20G011160 vs. NCBI nr
Match:
RVX08961.1 (Retrovirus-related Pol polyprotein from transposon RE2 [Vitis vinifera])
HSP 1 Score: 326.2 bits (835), Expect = 5.4e-85
Identity = 220/607 (36.24%), Postives = 316/607 (52.06%), Query Frame = 0
Query: 3 TSSSSKESSESWLIDNGYTNHITYDKESFEELRDTEDKRVRIGNGEHLEVKGKGTVAITS 62
T ++ +SESWL+D+G TNH+TYD++ F E+ T +VRIGNGE++ VKGKGTVAI S
Sbjct: 309 TCFANGSTSESWLVDSGCTNHMTYDQDLFREIDRTAISKVRIGNGEYIPVKGKGTVAIES 368
Query: 63 YEGTKFIPDVLFVPKIDQNLLSVGQLLDKGYKVLFENKQCLIKDASGKDLFNVKMEGKSF 122
G K I DVLFVP IDQNLLSVGQ ++KG+KV FE+K C+IKDA G+++FN+KM+GKSF
Sbjct: 369 LTGLKLISDVLFVPDIDQNLLSVGQFVEKGFKVCFEDKNCIIKDAEGREVFNIKMKGKSF 428
Query: 123 ALN-----PTAFILRVSATEIWHKKLTLSSSRGNKPYVVK----IEGRGTI---LFVSKG 182
ALN A + T +WHK+ L N +K +EG + L +
Sbjct: 429 ALNMLEDEQIAAAQHENNTMLWHKR--LGHFHHNVVLYMKKNQIVEGLPDLEEELPICVA 488
Query: 183 GEHCKLTDFYFIPQ--ARRTTNRLYILELEIDQP------------VSLSAKTEEVSWRW 242
++ K T F PQ A ++T +L ++ ++ P ++ W +
Sbjct: 489 CQYGKQTRLPF-PQKAAWKSTQKLQLVHTDVSGPQKTPSLKGSKYYIAFVDDFTRFCWIY 548
Query: 243 HARYG------HLNFPALEETSPP---PAGAPPEPVEFATPRTADSTLDADHDTDLEARY 302
Y L + A+ E E+ + + DA D L A Y
Sbjct: 549 FLTYKSEVADVFLRYKAMVENQREYRIKVIRSDNGTEYTSEKFNKFCEDAGIDHQLTAPY 608
Query: 303 R------MMDDLVGGGEPPGLAARELEEVTFAEAEKNPCWRKAMQEEMTSITENQTWSLE 362
+ D + PG+ + A P K + E + WS +
Sbjct: 609 TPQQNGVVKRDKLDKKSEPGIFI-GYSNTSKAYRIYLPQNNKIVVSRDVKFLETEKWSWD 668
Query: 363 DMPPGH--------RAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQ-KQGVDFEEAMQE 422
+ + G + +F + + + A L G+V+ + + MQE
Sbjct: 669 EQNQQYIDEDVDELPIRGFRTLFDIYQR------CNIAVLEPAGFVEAAENKRWRVVMQE 728
Query: 423 EMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVDFE 482
E+ I +N TW L D P + IG+KWV++ K N G + KHKARLV KGY Q GVDF
Sbjct: 729 ELNMIDKNNTWELVDRPSHKKPIGVKWVYRTKLNSDGSINKHKARLVVKGYAQMFGVDFS 788
Query: 483 EVFAPAARLESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETVYVRQPPGFLDNDNPNK 542
E FAP ARL+++R LLA+AA W+++ +DVKSAFLNG L+E ++V QP GF K
Sbjct: 789 ETFAPVARLDTIRMLLALAAQRKWKIYQLDVKSAFLNGYLEEEIFVEQPEGFSIKGKEEK 848
Query: 543 VLRLHKALCGLQQAPRAWNAKLDSTLLSLNFKRCASEHDMYTYGHGKKRLIVGVYVDNLI 560
V L KAL GL+QAPRAW +++D+ LL+L F + SE +Y + LIV +YVD+L+
Sbjct: 849 VYLLKKALYGLRQAPRAWCSRIDTHLLTLGFHKSLSEFTLYIKKIEEDILIVSLYVDDLL 905
BLAST of CmoCh20G011160 vs. NCBI nr
Match:
XP_003613757.4 (uncharacterized protein LOC11413243 [Medicago truncatula])
HSP 1 Score: 323.2 bits (827), Expect = 4.5e-84
Identity = 238/696 (34.20%), Postives = 339/696 (48.71%), Query Frame = 0
Query: 1 MVTSSSSKESSESWLIDNGYTNHITYDKESFEELRDTEDKRVRIGNGEHLEVKGKGTVAI 60
+ T S +SS+SWLID+G TNH+TYDKE F+ELR ++ +VRIGNG+++ VKGKGT+AI
Sbjct: 320 VATCFSGSDSSDSWLIDSGCTNHMTYDKEIFKELRSSKTSKVRIGNGQNISVKGKGTIAI 379
Query: 61 TSYEGTKFIPDVLFVPKIDQNLLSVGQLLDKGYKVLFENKQCLIKDASGKDLFNVKMEGK 120
S GTK I DVL+VP+IDQNLLSVGQLL+KG+KV FE+K CLIKDASG+++F VKM GK
Sbjct: 380 VSCSGTKLISDVLYVPEIDQNLLSVGQLLEKGFKVHFEDKHCLIKDASGQEMFKVKMRGK 439
Query: 121 SFALNP-----TAFILRVSATEIWHKKLTLSSSRG-----NKPYVVKIEGRGTILFVSKG 180
SF LNP +AF ++ S TE+WHK+L +G +K V + L +
Sbjct: 440 SFTLNPLEEKQSAFTVKESVTEMWHKRLGHYHHQGLLLLQSKKLVRDLPMLEDTLPHCQA 499
Query: 181 GEHCKLTDFYFIPQARRTTNRLYILELEIDQPVSLSAKTEEV------------SWRWHA 240
++ K F A R T +L ++ ++ P S+ + W +
Sbjct: 500 CQYGKQHRQSFPKSAWRATQKLQLIHTDLCGPHRTSSLNSSLYYIVFIDDFTRFCWIFFL 559
Query: 241 RYG------HLNFPALEE------------------------------------TSP--P 300
++ L F L E T+P P
Sbjct: 560 KFKSEVAGVFLKFKKLVENESGCNIQVLRSDNGKEYTSGEFNSFCEEAGIKHQLTAPYTP 619
Query: 301 PAGAPPE-------------------PVEFATPRTADS--------TLDADHDTDLEARY 360
E P +F S T + T EA Y
Sbjct: 620 QQNGVSERRNRYIMEMTRCMLHEKNLPKKFWAEAANTSVFLQNRLPTTAVKNQTPFEAWY 679
Query: 361 RMMDDL-------------VGGGEPPGLAARELEEVTFAEAEKNPCWRKAMQEEMTSI-- 420
L V + L + ++ + + + + K Q E +I
Sbjct: 680 GYKPSLNFLKVFGCLCFTYVPQVKRDKLDKKAVQGIFIGYSTISKAY-KVFQPETGNIVI 739
Query: 421 ------TENQTWSLEDMPPGHRAIG-LKWVFKLKRNE--KGEVVK----HKARLVAKGYV 480
EN+ W + + ++A +K V + E K E+V RL++ Y
Sbjct: 740 SRDVHFVENEEWVWDTLKVSNQASNQIKNVERQTSEEDWKNEMVDDIPIRGTRLLSDVYE 799
Query: 481 Q-----KQGVDFEE---------AMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKR 540
+ + DF E AM+EE+ I +N TW L D P + IG+KWVF+ K
Sbjct: 800 RCNIAVCEPADFNEAKLDRKWMVAMKEELHMIEKNNTWQLVDRPQDRKIIGVKWVFRTKL 859
Query: 541 NEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPAARLESVRFLLAIAAHHSWEVHHMDVKS 562
N G + KHKARLV KGY Q GVD+ + FAP ARL+++R LLA+A W+V+ +DVKS
Sbjct: 860 NADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARLDTIRLLLAVAIQMGWKVYQLDVKS 919
BLAST of CmoCh20G011160 vs. TAIR 10
Match:
AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )
HSP 1 Score: 161.0 bits (406), Expect = 2.8e-39
Identity = 78/189 (41.27%), Postives = 120/189 (63.49%), Query Frame = 0
Query: 369 AMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQG 428
AM +E+ ++ TW + +PP + IG KWV+K+K N G + ++KARLVAKGY Q++G
Sbjct: 101 AMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEG 160
Query: 429 VDFEEVFAPAARLESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETVYVRQPPGFL--- 488
+DF E F+P +L SV+ +LAI+A +++ +H +D+ +AFLNG+L E +Y++ PPG+
Sbjct: 161 IDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQ 220
Query: 489 -DNDNPNKVLRLHKALCGLQQAPRAWNAKLDSTLLSLNFKRCASEHDMYTYGHGKKRLIV 548
D+ PN V L K++ GL+QA R W K TL+ F + S+H + L V
Sbjct: 221 GDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCV 280
Query: 549 GVYVDNLII 554
VYVD++II
Sbjct: 281 LVYVDDIII 289
BLAST of CmoCh20G011160 vs. TAIR 10
Match:
ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )
HSP 1 Score: 76.6 bits (187), Expect = 6.9e-14
Identity = 35/84 (41.67%), Postives = 55/84 (65.48%), Query Frame = 0
Query: 368 EAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQ 427
+AMQEE+ +++ N+TW L P +G KWVFK K + G + + KARLVAKG+ Q++
Sbjct: 42 QAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEE 101
Query: 428 GVDFEEVFAPAARLESVRFLLAIA 452
G+ F E ++P R ++R +L +A
Sbjct: 102 GIYFVETYSPVVRTATIRTILNVA 125
BLAST of CmoCh20G011160 vs. TAIR 10
Match:
AT3G20980.1 (Gag-Pol-related retrotransposon family protein )
HSP 1 Score: 57.8 bits (138), Expect = 3.3e-08
Identity = 40/118 (33.90%), Postives = 61/118 (51.69%), Query Frame = 0
Query: 14 WLIDNGYTNHITYDKESFEELRDTEDKRVRIGNGEHLE-----VKGKGTVAITSYEGTKF 73
WLI + +NH+T + F L + +V+ +G+ E V+G G V + EG K
Sbjct: 269 WLISSTNSNHMTPHVKFFTTLDRSRKCKVKFISGDKSETTVAMVEGIGDVTFITNEGNKT 328
Query: 74 IPDVLFVPKIDQNLLSVGQLLDKGYKVLFENKQ-CLIKDASGKDLFNVKM-EGKSFAL 125
I +VL+VP I+ N LSV QL G++V E + C + D + +F M E + F L
Sbjct: 329 IKNVLYVPGIEGNALSVSQLKRNGFEVSMERRTGCFVWDRTTGKMFGKNMWEKRGFCL 386
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q94HW2 | 1.5e-42 | 42.64 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Q9ZT94 | 1.4e-40 | 41.12 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
P10978 | 7.1e-40 | 42.05 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
P04146 | 8.2e-36 | 38.97 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
P25600 | 9.4e-16 | 40.86 | Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7VC09 | 1.1e-86 | 35.05 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
A0A438JJ21 | 2.6e-85 | 36.24 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Vitis vinifera OX=2976... | [more] |
A0A438EE23 | 2.6e-85 | 34.58 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=2976... | [more] |
A0A438CDR2 | 3.8e-84 | 37.59 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=2976... | [more] |
A0A438DQ73 | 4.9e-84 | 35.56 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=2976... | [more] |
Match Name | E-value | Identity | Description | |
XP_023521510.1 | 5.7e-87 | 52.34 | uncharacterized protein LOC111785335 [Cucurbita pepo subsp. pepo] | [more] |
KAA0063435.1 | 2.2e-86 | 35.05 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
RVW46097.1 | 5.4e-85 | 34.58 | Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | [more] |
RVX08961.1 | 5.4e-85 | 36.24 | Retrovirus-related Pol polyprotein from transposon RE2 [Vitis vinifera] | [more] |
XP_003613757.4 | 4.5e-84 | 34.20 | uncharacterized protein LOC11413243 [Medicago truncatula] | [more] |
Match Name | E-value | Identity | Description | |
AT4G23160.1 | 2.8e-39 | 41.27 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | [more] |
ATMG00820.1 | 6.9e-14 | 41.67 | Reverse transcriptase (RNA-dependent DNA polymerase) | [more] |
AT3G20980.1 | 3.3e-08 | 33.90 | Gag-Pol-related retrotransposon family protein | [more] |