CmoCh19G000580 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh19G000580
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	PRA1 family protein
Location	Cmo_Chr19: 324649 .. 325176 (-)
RNA-Seq Expression	CmoCh19G000580
Synteny	CmoCh19G000580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTCTGTTCAGCCAACTCCATATGCCTTCTCTGAAACTCCCATCCTATCCCGTTTCGCCACTTTACGGCCATGGCGGGAGCTTCTCCAGCCGCCGTCCTCCTTCATCCGCCCTTCATCCATTTCCGAAGCGACCATTCGATGTAAGCGCAATCTCAACTACTTTCGTGTTAATTACACCTTCATCGTCTTGCTCATTCTCTTTCTCAGCCTCCTCTGGCACCCTATTTCCTTGATTGTCTTCTTGATCGTGTTCGTTGCCTGGTTCTTCCTTTATTTTTTCACGGATGGTCCATTGGTGGTGTTTAATCGTGTTGTTGATGATCGAGTTGTGTTGGCTGTGCTTGGATTGGTTACGATTGTCGCTTTGGTGTTCACGGATGTGTCGTTGAACGTATTGATTTCGGTTTTGATTGGGGTTTTTCTTGTTTTGATACATGCGGCCTTTAGGGTTACAGAGGATTTGTATATTGACGAGCAAGAAGTCGCCGATGGCGGATTGCTTTCGGTTGTTGGCAGCAGGTAA

mRNA sequence

ATGGCCTCTGTTCAGCCAACTCCATATGCCTTCTCTGAAACTCCCATCCTATCCCGTTTCGCCACTTTACGGCCATGGCGGGAGCTTCTCCAGCCGCCGTCCTCCTTCATCCGCCCTTCATCCATTTCCGAAGCGACCATTCGATGTAAGCGCAATCTCAACTACTTTCGTGTTAATTACACCTTCATCGTCTTGCTCATTCTCTTTCTCAGCCTCCTCTGGCACCCTATTTCCTTGATTGTCTTCTTGATCGTGTTCGTTGCCTGGTTCTTCCTTTATTTTTTCACGGATGGTCCATTGGTGGTGTTTAATCGTGTTGTTGATGATCGAGTTGTGTTGGCTGTGCTTGGATTGGTTACGATTGTCGCTTTGGTGTTCACGGATGTGTCGTTGAACGTATTGATTTCGGTTTTGATTGGGGTTTTTCTTGTTTTGATACATGCGGCCTTTAGGGTTACAGAGGATTTGTATATTGACGAGCAAGAAGTCGCCGATGGCGGATTGCTTTCGGTTGTTGGCAGCAGGTAA

Coding sequence (CDS)

ATGGCCTCTGTTCAGCCAACTCCATATGCCTTCTCTGAAACTCCCATCCTATCCCGTTTCGCCACTTTACGGCCATGGCGGGAGCTTCTCCAGCCGCCGTCCTCCTTCATCCGCCCTTCATCCATTTCCGAAGCGACCATTCGATGTAAGCGCAATCTCAACTACTTTCGTGTTAATTACACCTTCATCGTCTTGCTCATTCTCTTTCTCAGCCTCCTCTGGCACCCTATTTCCTTGATTGTCTTCTTGATCGTGTTCGTTGCCTGGTTCTTCCTTTATTTTTTCACGGATGGTCCATTGGTGGTGTTTAATCGTGTTGTTGATGATCGAGTTGTGTTGGCTGTGCTTGGATTGGTTACGATTGTCGCTTTGGTGTTCACGGATGTGTCGTTGAACGTATTGATTTCGGTTTTGATTGGGGTTTTTCTTGTTTTGATACATGCGGCCTTTAGGGTTACAGAGGATTTGTATATTGACGAGCAAGAAGTCGCCGATGGCGGATTGCTTTCGGTTGTTGGCAGCAGGTAA

Protein sequence

MASVQPTPYAFSETPILSRFATLRPWRELLQPPSSFIRPSSISEATIRCKRNLNYFRVNYTFIVLLILFLSLLWHPISLIVFLIVFVAWFFLYFFTDGPLVVFNRVVDDRVVLAVLGLVTIVALVFTDVSLNVLISVLIGVFLVLIHAAFRVTEDLYIDEQEVADGGLLSVVGSR

Homology

[Close]

BLAST of CmoCh19G000580 vs. ExPASy Swiss-Prot
Match: Q9FRR1 (PRA1 family protein E OS=Arabidopsis thaliana OX=3702 GN=PRA1E PE=1 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 3.9e-29
Identity = 74/155 (47.74%), Postives = 105/155 (67.74%), Query Frame = 0


Query: 18  SRFATLRPWRELLQPPSSFIRPSSISEATIRCKRNLNYFRVNYTFIVLLILFLSLLWHPI 77
           S   TLRPWRE+L   S+   P    EA    K N++YFR NY   VL I+FL L++HP+
Sbjct: 42  SMITTLRPWREILD-LSALSLPRGYDEAMAHLKHNISYFRGNYALAVLAIVFLGLIYHPM 101

Query: 78  SLIVFLIVFVAWFFLYFFTDG--PLVVFNRVVDDRVVLAVLGLVTIVALVFTDVSLNVLI 137
           S+I F++VF+ W  LYF  D    +V+  + VDD++VL +L LVT++ALV+TDV  NVL+
Sbjct: 102 SMIAFIVVFIGWILLYFSRDANDSIVISGKEVDDKIVLVLLSLVTVLALVYTDVGENVLV 161

Query: 138 SVLIGVFLVLIHAAFRVTEDLYIDEQEVADGGLLS 171
           S++IG+ +V  H AFR T+DL++DE+    GGL+S
Sbjct: 162 SLIIGLLIVGAHGAFRNTDDLFLDEESARRGGLVS 195

[Close]

BLAST of CmoCh19G000580 vs. ExPASy Swiss-Prot
Match: Q9LIC6 (PRA1 family protein F3 OS=Arabidopsis thaliana OX=3702 GN=PRA1F3 PE=1 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 3.4e-25
Identity = 66/146 (45.21%), Postives = 97/146 (66.44%), Query Frame = 0


Query: 16  ILSRFATLRPWRELLQPPSSFIRPSSISEATIRCKRNLNYFRVNYTFIVLLILFLSLLWH 75
           I +  AT R WR +    S  + P  +S+A  R K NL YFR+NY  +VL+++F SL+WH
Sbjct: 29  IKAGLATRRAWRVMFDFHSMGL-PHGVSDAFTRIKTNLAYFRMNYAIVVLIVIFFSLIWH 88

Query: 76  PISLIVFLIVFVAWFFLYFFTDGPLVVFNRVVDDRVVLAVLGLVTIVALVFTDVSLNVLI 135
           P SLIVF ++ V W FLYF  D P+ +F   +DDR VL VL ++T+V L+ T+ + N++ 
Sbjct: 89  PTSLIVFTVLVVVWIFLYFLRDEPIKLFRFQIDDRTVLIVLSVLTVVLLLLTNATFNIVG 148

Query: 136 SVLIGVFLVLIHAAFRVTEDLYIDEQ 162
           +++ G  LVLIH+  R TEDL++DE+
Sbjct: 149 ALVTGAVLVLIHSVVRKTEDLFLDEE 173

[Close]

BLAST of CmoCh19G000580 vs. ExPASy Swiss-Prot
Match: Q9FLB6 (PRA1 family protein B3 OS=Arabidopsis thaliana OX=3702 GN=PRA1B3 PE=1 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 4.5e-25
Identity = 75/149 (50.34%), Postives = 99/149 (66.44%), Query Frame = 0


Query: 24  RPWRELLQPPSSFIRPSSISEATIRCKRNLNYFRVNYTFIVLLILFLSLLWHPISLIVFL 83
           RPW EL+   S+  RP S+++A  R +RNL YF+VNY  IV L+L LSLL HP SL+V L
Sbjct: 48  RPWLELVD-RSAISRPESLTDAYSRIRRNLPYFKVNYVTIVSLVLALSLLSHPFSLLVLL 107

Query: 84  IVFVAWFFLYFF--TDGPLVVFNRVVDDRVVLAVLGLVTIVALVFTDVSLNVLISVLIGV 143
            +F AW FLY F  +D PLVV  R   DR  L VL ++TIV +  T V   +  +++IG 
Sbjct: 108 CLFCAWIFLYLFRPSDQPLVVLGRTFSDRETLGVLVILTIVVVFLTSVGSLLTSALMIGF 167

Query: 144 FLVLIHAAFRVTEDLYIDEQEVADGGLLS 171
            +V +H AFRV EDL++D+QE A+ GLLS
Sbjct: 168 GIVCLHGAFRVPEDLFLDDQEPANTGLLS 195

[Close]

BLAST of CmoCh19G000580 vs. ExPASy Swiss-Prot
Match: Q9SIY7 (PRA1 family protein B2 OS=Arabidopsis thaliana OX=3702 GN=PRA1B2 PE=1 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.3e-24
Identity = 73/153 (47.71%), Postives = 101/153 (66.01%), Query Frame = 0


Query: 24  RPWRELLQPPSSFIRPSSISEATIRCKRNLNYFRVNYTFIVLLILFLSLLWHPISLIVFL 83
           RPW EL+   SSF RP S++++  R ++NL YF+VNY+ IV L+L  SLL HP SL+V L
Sbjct: 47  RPWLELVD-RSSFARPDSLTDSFSRIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLL 106

Query: 84  IVFVAWFFLYFF--TDGPLVVFNRVVDDRVVLAVLGLVTIVALVFTDVSLNVLISVLIGV 143
            +  +W FLY F  +D PLV+F R   DR  L  L L TIV +  T V   +  ++ IG+
Sbjct: 107 SLLGSWMFLYLFRSSDQPLVLFGRSFSDRETLLGLVLTTIVVVFMTSVGSLLTSALTIGI 166

Query: 144 FLVLIHAAFRVTEDLYIDEQEVADGGLLSVVGS 175
            +V +H AFRV +DL++DEQE A+ GLLS +G+
Sbjct: 167 AIVCLHGAFRVPDDLFLDEQEPANAGLLSFIGN 198

[Close]

BLAST of CmoCh19G000580 vs. ExPASy Swiss-Prot
Match: Q9C889 (PRA1 family protein F2 OS=Arabidopsis thaliana OX=3702 GN=PRA1F2 PE=1 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 5.0e-24
Identity = 77/162 (47.53%), Postives = 98/162 (60.49%), Query Frame = 0


Query: 16  ILSRFATLRPWRELLQPPSSFIRPSSISEATIRCKRNLNYFRVNYTFIVLLILFLSLLWH 75
           I S  AT RPW+ +    S  + P    +A  R K NL YFR NY   VL ILFLSLL+H
Sbjct: 29  IKSGLATRRPWKSMFDFESMTL-PHGFFDAISRIKTNLGYFRANYAIGVLFILFLSLLYH 88

Query: 76  PISLIVFLIVFVAWFFLYFFTDGPLVVFNRVVDDRVVLAVLGLVTIVALVFTDVSLNVLI 135
           P SLIV  I+ V W FLYF  D PLVVF   +DDR VL  L ++T+V L+ T  + N+L 
Sbjct: 89  PTSLIVLSILVVFWIFLYFLRDEPLVVFGYQIDDRTVLIGLSVLTVVMLLLTHATSNILG 148

Query: 136 SVLIGVFLVLIHAAFRVTEDLYIDEQEVA---DGGLLSVVGS 175
           S+L    LVLIHAA R +++L++DE+  A     GL+S   S
Sbjct: 149 SLLTAAVLVLIHAAVRRSDNLFLDEEAAAVTEASGLMSYPSS 189

[Close]

BLAST of CmoCh19G000580 vs. ExPASy TrEMBL
Match: A0A6J1HKD9 (PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111463820 PE=3 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 7.6e-84
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MASVQPTPYAFSETPILSRFATLRPWRELLQPPSSFIRPSSISEATIRCKRNLNYFRVNY 60
           MASVQPTPYAFSETPILSRFATLRPWRELLQPPSSFIRPSSISEATIRCKRNLNYFRVNY
Sbjct: 1   MASVQPTPYAFSETPILSRFATLRPWRELLQPPSSFIRPSSISEATIRCKRNLNYFRVNY 60

Query: 61  TFIVLLILFLSLLWHPISLIVFLIVFVAWFFLYFFTDGPLVVFNRVVDDRVVLAVLGLVT 120
           TFIVLLILFLSLLWHPISLIVFLIVFVAWFFLYFFTDGPLVVFNRVVDDRVVLAVLGLVT
Sbjct: 61  TFIVLLILFLSLLWHPISLIVFLIVFVAWFFLYFFTDGPLVVFNRVVDDRVVLAVLGLVT 120

Query: 121 IVALVFTDVSLNVLISVLIGVFLVLIHAAFRVTEDLYIDEQEVADGGLLSVVGSR 176
           IVALVFTDVSLNVLISVLIGVFLVLIHAAFRVTEDLYIDEQEVADGGLLSVVGSR
Sbjct: 121 IVALVFTDVSLNVLISVLIGVFLVLIHAAFRVTEDLYIDEQEVADGGLLSVVGSR 175

[Close]

BLAST of CmoCh19G000580 vs. ExPASy TrEMBL
Match: A0A6J1HWW4 (PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111466988 PE=3 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 5.1e-80
Identity = 170/183 (92.90%), Postives = 174/183 (95.08%), Query Frame = 0


Query: 1   MASVQPTPYAFSETPILSRF--------ATLRPWRELLQPPSSFIRPSSISEATIRCKRN 60
           MASVQPTPYAFSETPILSRF        ATLRPWRELLQPPSSF RPSSISEATIRCKRN
Sbjct: 1   MASVQPTPYAFSETPILSRFRPASHSIYATLRPWRELLQPPSSFTRPSSISEATIRCKRN 60

Query: 61  LNYFRVNYTFIVLLILFLSLLWHPISLIVFLIVFVAWFFLYFFTDGPLVVFNRVVDDRVV 120
           LNYFRVNYTFIVLLILFLSLLWHP+SLIVFLIVFVAWFFLYFFTDGPLVV+NRVVDDRVV
Sbjct: 61  LNYFRVNYTFIVLLILFLSLLWHPVSLIVFLIVFVAWFFLYFFTDGPLVVYNRVVDDRVV 120

Query: 121 LAVLGLVTIVALVFTDVSLNVLISVLIGVFLVLIHAAFRVTEDLYIDEQEVADGGLLSVV 176
           LAVLGLVTIVALV+TDVSLNVLISVLIGVFLVLIHAAFRVTEDLYIDEQEVADGG+LSVV
Sbjct: 121 LAVLGLVTIVALVYTDVSLNVLISVLIGVFLVLIHAAFRVTEDLYIDEQEVADGGMLSVV 180

[Close]

BLAST of CmoCh19G000580 vs. ExPASy TrEMBL
Match: A0A0A0LKV0 (PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_2G224290 PE=3 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.5e-66
Identity = 147/182 (80.77%), Postives = 158/182 (86.81%), Query Frame = 0


Query: 1   MASVQPTPYAFSETPILSR--------FATLRPWRELLQPPSSFIRPSSISEATIRCKRN 60
           M+S QP+PY F+ET ILSR        +ATLRPWRELLQP SSF RPSS+ EA IRCKRN
Sbjct: 1   MSSNQPSPYGFTETSILSRARAASDSLYATLRPWRELLQPLSSFTRPSSVGEAIIRCKRN 60

Query: 61  LNYFRVNYTFIVLLILFLSLLWHPISLIVFLIVFVAWFFLYFFTDGPLVVFNRVVDDRVV 120
           L YFRVNYTFIVLLILFLSLLWHP+SLIVFLIVFVAWFFLYFF D PL VF+RVVDDRVV
Sbjct: 61  LKYFRVNYTFIVLLILFLSLLWHPVSLIVFLIVFVAWFFLYFFRDEPLEVFHRVVDDRVV 120

Query: 121 LAVLGLVTIVALVFTDVSLNVLISVLIGVFLVLIHAAFRVTEDLYIDEQEVADGGLLSVV 175
           L +LG+VTI ALV TDVSLNVLIS+LIGVFLVLIHA  RVT+DLYIDEQEVADGGLLSVV
Sbjct: 121 LVLLGIVTIFALVLTDVSLNVLISILIGVFLVLIHAGSRVTDDLYIDEQEVADGGLLSVV 180

[Close]

BLAST of CmoCh19G000580 vs. ExPASy TrEMBL
Match: A0A6J1EWX4 (PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111437276 PE=3 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 5.5e-66
Identity = 144/177 (81.36%), Postives = 157/177 (88.70%), Query Frame = 0


Query: 1   MASVQPTPYAFSETPIL---SRFATLRPWRELLQPPSSFIRPSSISEATIRCKRNLNYFR 60
           M++V P+PYAF+ET IL   S +ATLRPWRELLQP SSF RPSS+ EA+IRCKRNL YFR
Sbjct: 1   MSTVHPSPYAFTETSILTSDSAYATLRPWRELLQPLSSFTRPSSLGEASIRCKRNLKYFR 60

Query: 61  VNYTFIVLLILFLSLLWHPISLIVFLIVFVAWFFLYFFTDGPLVVFNRVVDDRVVLAVLG 120
            NYT +VLLILF SLLWHP+SLIVFLIVFVAWFFLYFF D PL +F+RVVDDRVVLAVLG
Sbjct: 61  SNYTLVVLLILFFSLLWHPVSLIVFLIVFVAWFFLYFFRDQPLELFHRVVDDRVVLAVLG 120

Query: 121 LVTIVALVFTDVSLNVLISVLIGVFLVLIHAAFRVTEDLYIDEQEVADGGLLSVVGS 175
           LVTIV LV TDVS NVL+S+LIGVFLVL HAAFRVTEDLYIDEQEVADGGLLSVVGS
Sbjct: 121 LVTIVVLVLTDVSFNVLLSILIGVFLVLTHAAFRVTEDLYIDEQEVADGGLLSVVGS 177

[Close]

BLAST of CmoCh19G000580 vs. ExPASy TrEMBL
Match: A0A5A7UNI5 (PRA1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G001030 PE=3 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 9.3e-66
Identity = 144/182 (79.12%), Postives = 157/182 (86.26%), Query Frame = 0


Query: 1   MASVQPTPYAFSETPILSR--------FATLRPWRELLQPPSSFIRPSSISEATIRCKRN 60
           M+S QP PY F+ET ILSR        +ATLRPWRELLQP SSF RPSS+ EA IRCKRN
Sbjct: 1   MSSNQPYPYGFTETSILSRARAASDSVYATLRPWRELLQPLSSFTRPSSVGEAIIRCKRN 60

Query: 61  LNYFRVNYTFIVLLILFLSLLWHPISLIVFLIVFVAWFFLYFFTDGPLVVFNRVVDDRVV 120
           L YFRVNYTFIVLLILFLSLLWHP+SLIVFL+VFVAWFFLYFF D PL VFNRVVDDRVV
Sbjct: 61  LKYFRVNYTFIVLLILFLSLLWHPVSLIVFLVVFVAWFFLYFFRDEPLEVFNRVVDDRVV 120

Query: 121 LAVLGLVTIVALVFTDVSLNVLISVLIGVFLVLIHAAFRVTEDLYIDEQEVADGGLLSVV 175
           L +LG+VTI ALV TDVSLNVL+S+LIGVFLVL+HA  RV++DLYIDEQEVADGGLLSVV
Sbjct: 121 LVLLGIVTIFALVLTDVSLNVLVSILIGVFLVLVHAGSRVSDDLYIDEQEVADGGLLSVV 180

[Close]

BLAST of CmoCh19G000580 vs. TAIR 10
Match: AT1G08770.1 (prenylated RAB acceptor 1.E )

HSP 1 Score: 129.4 bits (324), Expect = 2.8e-30
Identity = 74/155 (47.74%), Postives = 105/155 (67.74%), Query Frame = 0


Query: 18  SRFATLRPWRELLQPPSSFIRPSSISEATIRCKRNLNYFRVNYTFIVLLILFLSLLWHPI 77
           S   TLRPWRE+L   S+   P    EA    K N++YFR NY   VL I+FL L++HP+
Sbjct: 42  SMITTLRPWREILD-LSALSLPRGYDEAMAHLKHNISYFRGNYALAVLAIVFLGLIYHPM 101

Query: 78  SLIVFLIVFVAWFFLYFFTDG--PLVVFNRVVDDRVVLAVLGLVTIVALVFTDVSLNVLI 137
           S+I F++VF+ W  LYF  D    +V+  + VDD++VL +L LVT++ALV+TDV  NVL+
Sbjct: 102 SMIAFIVVFIGWILLYFSRDANDSIVISGKEVDDKIVLVLLSLVTVLALVYTDVGENVLV 161

Query: 138 SVLIGVFLVLIHAAFRVTEDLYIDEQEVADGGLLS 171
           S++IG+ +V  H AFR T+DL++DE+    GGL+S
Sbjct: 162 SLIIGLLIVGAHGAFRNTDDLFLDEESARRGGLVS 195

[Close]

BLAST of CmoCh19G000580 vs. TAIR 10
Match: AT3G13720.1 (PRA1 (Prenylated rab acceptor) family protein )

HSP 1 Score: 116.3 bits (290), Expect = 2.5e-26
Identity = 66/146 (45.21%), Postives = 97/146 (66.44%), Query Frame = 0


Query: 16  ILSRFATLRPWRELLQPPSSFIRPSSISEATIRCKRNLNYFRVNYTFIVLLILFLSLLWH 75
           I +  AT R WR +    S  + P  +S+A  R K NL YFR+NY  +VL+++F SL+WH
Sbjct: 29  IKAGLATRRAWRVMFDFHSMGL-PHGVSDAFTRIKTNLAYFRMNYAIVVLIVIFFSLIWH 88

Query: 76  PISLIVFLIVFVAWFFLYFFTDGPLVVFNRVVDDRVVLAVLGLVTIVALVFTDVSLNVLI 135
           P SLIVF ++ V W FLYF  D P+ +F   +DDR VL VL ++T+V L+ T+ + N++ 
Sbjct: 89  PTSLIVFTVLVVVWIFLYFLRDEPIKLFRFQIDDRTVLIVLSVLTVVLLLLTNATFNIVG 148

Query: 136 SVLIGVFLVLIHAAFRVTEDLYIDEQ 162
           +++ G  LVLIH+  R TEDL++DE+
Sbjct: 149 ALVTGAVLVLIHSVVRKTEDLFLDEE 173

[Close]

BLAST of CmoCh19G000580 vs. TAIR 10
Match: AT5G05380.1 (prenylated RAB acceptor 1.B3 )

HSP 1 Score: 115.9 bits (289), Expect = 3.2e-26
Identity = 75/149 (50.34%), Postives = 99/149 (66.44%), Query Frame = 0


Query: 24  RPWRELLQPPSSFIRPSSISEATIRCKRNLNYFRVNYTFIVLLILFLSLLWHPISLIVFL 83
           RPW EL+   S+  RP S+++A  R +RNL YF+VNY  IV L+L LSLL HP SL+V L
Sbjct: 48  RPWLELVD-RSAISRPESLTDAYSRIRRNLPYFKVNYVTIVSLVLALSLLSHPFSLLVLL 107

Query: 84  IVFVAWFFLYFF--TDGPLVVFNRVVDDRVVLAVLGLVTIVALVFTDVSLNVLISVLIGV 143
            +F AW FLY F  +D PLVV  R   DR  L VL ++TIV +  T V   +  +++IG 
Sbjct: 108 CLFCAWIFLYLFRPSDQPLVVLGRTFSDRETLGVLVILTIVVVFLTSVGSLLTSALMIGF 167

Query: 144 FLVLIHAAFRVTEDLYIDEQEVADGGLLS 171
            +V +H AFRV EDL++D+QE A+ GLLS
Sbjct: 168 GIVCLHGAFRVPEDLFLDDQEPANTGLLS 195

[Close]

BLAST of CmoCh19G000580 vs. TAIR 10
Match: AT2G40380.1 (prenylated RAB acceptor 1.B2 )

HSP 1 Score: 114.4 bits (285), Expect = 9.3e-26
Identity = 73/153 (47.71%), Postives = 101/153 (66.01%), Query Frame = 0


Query: 24  RPWRELLQPPSSFIRPSSISEATIRCKRNLNYFRVNYTFIVLLILFLSLLWHPISLIVFL 83
           RPW EL+   SSF RP S++++  R ++NL YF+VNY+ IV L+L  SLL HP SL+V L
Sbjct: 47  RPWLELVD-RSSFARPDSLTDSFSRIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLL 106

Query: 84  IVFVAWFFLYFF--TDGPLVVFNRVVDDRVVLAVLGLVTIVALVFTDVSLNVLISVLIGV 143
            +  +W FLY F  +D PLV+F R   DR  L  L L TIV +  T V   +  ++ IG+
Sbjct: 107 SLLGSWMFLYLFRSSDQPLVLFGRSFSDRETLLGLVLTTIVVVFMTSVGSLLTSALTIGI 166

Query: 144 FLVLIHAAFRVTEDLYIDEQEVADGGLLSVVGS 175
            +V +H AFRV +DL++DEQE A+ GLLS +G+
Sbjct: 167 AIVCLHGAFRVPDDLFLDEQEPANAGLLSFIGN 198

[Close]

BLAST of CmoCh19G000580 vs. TAIR 10
Match: AT1G55190.1 (PRA1 (Prenylated rab acceptor) family protein )

HSP 1 Score: 112.5 bits (280), Expect = 3.5e-25
Identity = 77/162 (47.53%), Postives = 98/162 (60.49%), Query Frame = 0


Query: 16  ILSRFATLRPWRELLQPPSSFIRPSSISEATIRCKRNLNYFRVNYTFIVLLILFLSLLWH 75
           I S  AT RPW+ +    S  + P    +A  R K NL YFR NY   VL ILFLSLL+H
Sbjct: 29  IKSGLATRRPWKSMFDFESMTL-PHGFFDAISRIKTNLGYFRANYAIGVLFILFLSLLYH 88

Query: 76  PISLIVFLIVFVAWFFLYFFTDGPLVVFNRVVDDRVVLAVLGLVTIVALVFTDVSLNVLI 135
           P SLIV  I+ V W FLYF  D PLVVF   +DDR VL  L ++T+V L+ T  + N+L 
Sbjct: 89  PTSLIVLSILVVFWIFLYFLRDEPLVVFGYQIDDRTVLIGLSVLTVVMLLLTHATSNILG 148

Query: 136 SVLIGVFLVLIHAAFRVTEDLYIDEQEVA---DGGLLSVVGS 175
           S+L    LVLIHAA R +++L++DE+  A     GL+S   S
Sbjct: 149 SLLTAAVLVLIHAAVRRSDNLFLDEEAAAVTEASGLMSYPSS 189

The following BLAST results are available for this feature:

BLAST of CmoCh19G000580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FRR1	3.9e-29	47.74	PRA1 family protein E OS=Arabidopsis thaliana OX=3702 GN=PRA1E PE=1 SV=1	[more]
Q9LIC6	3.4e-25	45.21	PRA1 family protein F3 OS=Arabidopsis thaliana OX=3702 GN=PRA1F3 PE=1 SV=1	[more]
Q9FLB6	4.5e-25	50.34	PRA1 family protein B3 OS=Arabidopsis thaliana OX=3702 GN=PRA1B3 PE=1 SV=1	[more]
Q9SIY7	1.3e-24	47.71	PRA1 family protein B2 OS=Arabidopsis thaliana OX=3702 GN=PRA1B2 PE=1 SV=1	[more]
Q9C889	5.0e-24	47.53	PRA1 family protein F2 OS=Arabidopsis thaliana OX=3702 GN=PRA1F2 PE=1 SV=1	[more]

BLAST of CmoCh19G000580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HKD9	7.6e-84	100.00	PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111463820 PE=3 SV=1	[more]
A0A6J1HWW4	5.1e-80	92.90	PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111466988 PE=3 SV=1	[more]
A0A0A0LKV0	2.5e-66	80.77	PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_2G224290 PE=3 SV=1	[more]
A0A6J1EWX4	5.5e-66	81.36	PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111437276 PE=3 SV=1	[more]
A0A5A7UNI5	9.3e-66	79.12	PRA1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G...	[more]

BLAST of CmoCh19G000580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08770.1	2.8e-30	47.74	prenylated RAB acceptor 1.E	[more]
AT3G13720.1	2.5e-26	45.21	PRA1 (Prenylated rab acceptor) family protein	[more]
AT5G05380.1	3.2e-26	50.34	prenylated RAB acceptor 1.B3	[more]
AT2G40380.1	9.3e-26	47.71	prenylated RAB acceptor 1.B2	[more]
AT1G55190.1	3.5e-25	47.53	PRA1 (Prenylated rab acceptor) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004895	Prenylated rab acceptor PRA1	PFAM	PF03208	PRA1	coord: 19..160 e-value: 1.4E-46 score: 157.7
IPR004895	Prenylated rab acceptor PRA1	PANTHER	PTHR19317	PRENYLATED RAB ACCEPTOR 1-RELATED	coord: 15..174
None	No IPR available	PANTHER	PTHR19317:SF13	PRA1 FAMILY PROTEIN	coord: 15..174

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G000580.1	CmoCh19G000580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane