CmoCh11G009440 (gene) Cucurbita moschata (Rifu) v1

InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Position :
0
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CTTTCCCATATTTCAGAGGGGTCCCTGTTGGGCGACTGCTGGGTCTGCGAGCTCTAGGAGGAGGAAGAAGAAGAAGAAAAGCCATGGAAGAAGGAGAAAGCGCCTCCTCGAAGTTGAGGATTTACGTTGGAGGACTAGGTGCTGCCATGACTGAAGACGACCTCAGGAAGGTTTTTCAGAGCGTCGGCGGCGTGGTGGAGGCCGTTGATTTCATTCGTTCCAAATCTCGGAGCTTCGCTTACGTCGACTTCTTTCCGTCCTCCCAATCGTCCGTCTCCAAACTCTTCAGCACTTACAATGGATGTGCTTGGAAAGGAGGAAAGTTGAGGCTTGAGAAAGCTAAGGAACATTATCTTGCTCGCTTGAGGCGGGAGTGGGAGGAAGATGCTGAAATTATGAATTATGATGATGGTGCAGACCTGGAGACTTCTGCTCCAGAATCTACAGAGCATGTTGCGAAATCAGAGCACATTCAGATTTTCTTTCCAAGTTTAGGAGAGGTGATTCTTTGCTTACGAAGTTTTCATTTTGAGATGATTCAATCAATGACTGTGAAGTCTTTACCAATTAGTGGTACGGGAACTCACAAATATGATTTTCCACATGTTGAGGTGCCTCCTCTTCCTGTGCATTTTTGTGACTGTGAAGAGCATAATGTTTCTGATCCCACTAGCAAATCCATGGACGCAAAAACAGGAGATTTGGATGCTGGGAATGGTGGAATTGGTGAAGATGAAATCAAGATGATGAATACAGTGTTGAACAAGCTCTTTGAGAGGCAGGAAGCTTCTCATGCTAATTGTAATGGAACCATGGGAGTCAAGGATAAAGACAACTCTAAGATATTGACCGATAATCAACCACTTGAAGATAATAAAGAGGATAGCGATGAAGATAGCCTTGTGCTTAATGTAATGGCTAGTGGCTCCAATTCCAAACCTTTGCCATTGAACAGTGGCAGTAAAAGTTTCAAAGCTCATGGGAACAGTAAGGTTAAGAATTACGCTATCACCATCGCCATTTTATCGTTTTTTCCTTCACGTTTTAAGATATATTTGAGAGGGTATGTTTATCTCACGGGTTTGTTGAAGCATTTTGGGTTTTTTGTATTTCATTCGGTTTTTATCATCTTGAACTTTGCGGTCGAGGGTGCGGACAGGGATCAGAAAGGTAATAGCAGAGTTCAAAGCAAGAAAAGGAAATCGGTTACCAATGAGGAATTTGATAGTAATGAATATGTGCCCAATATCTCTACTGGCAGTGGAAAGGGGAACACAAATCCAGCATATGAGCCAGTTGGACCCTCGAGGCCTCAAGCTCCTGATCGAGCAATGCCGATCCAATCTTCACGTTCTCAGAAATCTTCATGGAAAACACTTATTTGTGATAAGAGCAAGGCTTCATTCAGCATCTCAGACATACTGCCTTCTGTTCCTTCAGCAAATGAAGAGCAACCAGAAGCAGATGCTCTAAGTCTAGCTCATTCATCTCCGAACAGAAACAGCGACCGTGCTACTGCTGCAGTATTGAAAAGAAAAAAAGATAAAACGAAACCCGCGAATAGCAATGTTTCCTTCAGCATTTTAGACACACTGCCTACTGCGTCTTCAGGAGATCAAGAGCAAACAGAAGCTGATGATCCGAATCGAGCTCATTCAACTCCAAACAGAAACAGCGACCTTGCTACTGCTGCAGTATTGAAAAGGAAAAAAGATGAAACGAAACCCGCGAATAGCAATGTTTCGTTCTGCATTTCAGACGCACTGCCTACTGCATCATCAGCAGATCAAAAGCAAACAGAAGCCGAGGATCTGAATCTAGCTGCAACTGATGCAATATTTGAAAGCAAATCAAAAGAAATGAAATCTGTGGAGAGCTCCCCAGAAGCCGAAAATACTGTTCGAAATGTCACCTCGAATCAAGGAAGAGGCGCTGCATGGAAGCAAAAATCTTCATGGACACAATTAGTTAGCCAGGAAGCCACCTCCTTCAGTATTACTCAAATTTTATCAAACAATACTTCTGAAAAGCAGGTACAAAGGGAATCCGATGTCATCAATGTTAATCTTTTCGCGCCAAGCGAAAATAAGGATTCAATAGAACAGCAAATTCAAAGTACTGCGGCAGATGATTCTGCTGCATTTGTAGTTGCAAAAGATGAAACTGCCTGTTATGATGTCAAGAAGAACGATCAACCTGCAGTGCAAGAAAATGAGCCCTCTCCCACCGAAGCTATTGAGAGGCATATTAAACCACAGGAAGCAGGTTCATTTCATGCTAAAAGCGGCGAAACTTGCTGCCCGTTTATGAGAAATTCTCGGTCGGTAGCCGAGTGGACAAAGATAAAAGCTGCTCTTTCTGGTGGATCCAAGAAGAAAAAGCAGAGACAATTGGACACTCAATAGCATAGGTATGTAACTCTTAAATCTTGGTTGAATGTTGGGGCTTGGTTATATCTGACATAAATTAGTTTCATCTACTTGTGAACAATCCATTGCAGCTTTGAATGGGTTCTTGGGATGAAAGTGTTTTTAGCCTTAGAAGGAAAATTTAAAAGCAGTGAAGTTTTATCTACCTGCATTATTGACATTTTATAATTTAGCCTTATAATTTAAATCAGCTATTATTCATAGACAATATTTTGTATCTTTTAAATTGAGTTTAGATTTGCATTACCCACTCCCAAACGGCTTCAAACACTAACCAACACGTGTGGTTATTTACTTGGTTGTCGGGTGCCTTCTCGAGCTAGCTTTTTTGCGTG200400600800100012001400160018002000220024002600Expect = 4.1E-7 / Score = 39.6Expect = 7.1E-7 / Score = 29.0Score = 12.526224Expect = 2.4E-12 / Score = 48.9Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Expect = 6.09815E-21 / Score = 85.3019Score = SequenceSM00360PF00076PS50102G3DSA:3.30.70.330mobidb-litemobidb-litemobidb-litemobidb-litemobidb-litemobidb-litemobidb-litemobidb-litemobidb-litePTHR23099cd12226SSF54928
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 12..84
e-value: 4.1E-7
score: 39.6
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 13..57
e-value: 7.1E-7
score: 29.0
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 11..88
score: 12.526224
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 2..91
e-value: 2.4E-12
score: 48.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 591..618
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 360..379
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 360..429
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 492..514
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 249..270
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 415..429
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 380..398
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 599..618
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 449..550
NoneNo IPR availablePANTHERPTHR23099TRANSCRIPTIONAL REGULATORcoord: 1..767
IPR034138Nucleolar protein 8, RNA recognition motifCDDcd12226RRM_NOL8coord: 12..87
e-value: 6.09815E-21
score: 85.3019
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 12..98