Cmc08g0214541 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0214541
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Hydroxyproline-rich glycoprotein family protein
Location	CMiso1.1chr08: 4665865 .. 4667823 (+)
RNA-Seq Expression	Cmc08g0214541
Synteny	Cmc08g0214541

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGTATTGATTTTTTCAATATAGAATTTTGCACATGGAAAAAGTTTGATGTATTAGAATTGAAAGAAAGTATAAAAATATCACAATCATTTGCATTTGTAGGGGAATAGAAAAGGTTTGATATAATGTACAGTTGTATGCGGAAAATGTTAAATGCGATTGGAAAGAAAGAACTAAGAAGGATATGAAAAAAGGAGAGGGAAAGCGAGTGGGTGAGGGTTGGTGGTAACGAAGGGTCAGTTTTATTGGGAGACAGCCTGAGCCAACCCAAAGTGGCGTCCGTTGTTTCCCCCTGACCCTGAGTCTGGTGTGGCCCGTTTATCAACTGGGCCTTCTCTTCCTCCCTTTACCTTCCACTTTCTTCCACCCACTTTCTCCCTCTATCTTATCTATCCTTTCCATCTCATACTCATTTCTCCCCCCAACTTGTCACTTCCTAAATAGAGATAGATATCAGGATTCACTATACTCCAAAGCACTTGATTTTGTTACTCACTTCACTACAACTACAATCCCAAACTCGGCTTTCATCTACAGATGGTGAAGTCAACAAAAGAGTGAAGCCAAATGGACGGCACTCACAGCAATTTGTTAATAATCCTAATCCCACACGGCATACGGCCGCAGCCTCTTTTGCTCTCTCCTTTGTTGCTATCTCAAATTCACAATTACAGTTCATAAGATTGAATCTAGACACTCCCAAAAGGAAATAAACAAATAAACAAACAAACAACCGAATCATATCTTGTAAGCATTTTTCTACAGAAAATGAAAGTTAAAAAGGAAAAGAAAAACCAAATAAATACCTTTTTCTTAGCAAGTGCAGAGTGCTGAGCAGCATTAGCACCAACACCATTGTGGGCTCCATATCTTTTTCCGTACTTAGCTGTACCTTTACATTGTACACATACTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTTCTCTCACTTTCCTCTGTTTTCCATTATTATATATTCCCCCAAATCCTCCCTCCCATTTCCTCATTCCATTTTTCTTTCCCCTTCTTGATTTTGCTTTACCCATTTCCATGACAGATTCCACATGGAGAGTCCCAATTTCTCTCCCCCTCACTCCGACCCATCCCGACCCTCCTTAGGCTTTCCCCTCGGCACTGCTCTTCTCCTTCTCGTTATCTTCACCTTGAGCGGAATCTTCTCCTGTTGCTATCACTGGGACAAACTCAGATCCCTCCGCCGTTCCACTTCTCAACCCTTACGCGATCGTCACGATCTTCACCCACAATCACCTCCCTCCAAATCCAACCCTACTCAGGTAATTTTCATTCATTCTTCGTGCGTGCTTTCCTTTTTTTTTTTTTTTCTTTTTTTTTCCTCTTTCGGGTTTTGATTTTTGCTGAAACGATGAATTGGTTTTCGTGAACCAGGATTTGGAGAAGAACCAGAGAGAAAGCTTGTCGGTGTTGATGCCTGGGGATTCCATTCCGAAGTTTATTGCGATGCCGTGCCCTAGGGAACCGTTGCGGCCGGAGATGATTGAGGTGAAAGTGGAGAAGCCGTTAAAGCCGCTGCGAATTGCGGTTCCTTTCTATTAGCCGACTCAGATTCAGATTCAGTTTCACCATTGATTGATGTGTGTACATAGATAGTAGAAACAAATGAATTCTTTTGAGTTTCATCTGTTTTTTCTTTCCTTGTGAAAAGGAATTTCAATGGCTTCCAATTTCATTATTGTGTATATTTCAATTTCACAAGCGTTCATCACCAAGTTTCGTATCTGCCTTTGCCGCAGTTACAAACTTACGGAGGAAAAAAAAAAAAAAAGAAAAAAAAAAAGAGAGGAGCGTAATTATTATGAATTAAAAGCAGTTTATTTTATTAATGTTCTGTTTCACTCTAATTCCTTTTTGATGTTTAACGAAATGATTTGTGAAAGCAATTAAAAACAGAGCACTAACCAACCCAATGAATATGCTT

mRNA sequence

TCGTATTGATTTTTTCAATATAGAATTTTGCACATGGAAAAAGTTTGATGTATTAGAATTGAAAGAAAGTATAAAAATATCACAATCATTTGCATTTGTAGGGGAATAGAAAAGGTTTGATATAATGTACAGTTGTATGCGGAAAATGTTAAATGCGATTGGAAAGAAAGAACTAAGAAGGATATGAAAAAAGGAGAGGGAAAGCGAGTGGGTGAGGGTTGGTGGTAACGAAGGGTCAGTTTTATTGGGAGACAGCCTGAGCCAACCCAAAGTGGCGTCCGTTGTTTCCCCCTGACCCTGAGTCTGGTGTGGCCCGTTTATCAACTGGGCCTTCTCTTCCTCCCTTTACCTTCCACTTTCTTCCACCCACTTTCTCCCTCTATCTTATCTATCCTTTCCATCTCATACTCATTTCTCCCCCCAACTTGTCACTTCCTAAATAGAGATAGATATCAGGATTCACTATACTCCAAAGCACTTGATTTTGTTACTCACTTCACTACAACTACAATCCCAAACTCGGCTTTCATCTACAGATGGTGAAGTCAACAAAAGAGTGAAGCCAAATGGACGGCACTCACAGCAATTTGTTAATAATCCTAATCCCACACGGCATACGGCCGCAGCCTCTTTTGCTCTCTCCTTTGTTGCTATCTCAAATTCACAATTACAGTTCATAAGATTGAATCTAGACACTCCCAAAAGGAAATAAACAAATAAACAAACAAACAACCGAATCATATCTTGTAAGCATTTTTCTACAGAAAATGAAAGTTAAAAAGGAAAAGAAAAACCAAATAAATACCTTTTTCTTAGCAAGTGCAGAGTGCTGAGCAGCATTAGCACCAACACCATTGTGGGCTCCATATCTTTTTCCGTACTTAGCTGTACCTTTACATTGTACACATACTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTTCTCTCACTTTCCTCTGTTTTCCATTATTATATATTCCCCCAAATCCTCCCTCCCATTTCCTCATTCCATTTTTCTTTCCCCTTCTTGATTTTGCTTTACCCATTTCCATGACAGATTCCACATGGAGAGTCCCAATTTCTCTCCCCCTCACTCCGACCCATCCCGACCCTCCTTAGGCTTTCCCCTCGGCACTGCTCTTCTCCTTCTCGTTATCTTCACCTTGAGCGGAATCTTCTCCTGTTGCTATCACTGGGACAAACTCAGATCCCTCCGCCGTTCCACTTCTCAACCCTTACGCGATCGTCACGATCTTCACCCACAATCACCTCCCTCCAAATCCAACCCTACTCAGGATTTGGAGAAGAACCAGAGAGAAAGCTTGTCGGTGTTGATGCCTGGGGATTCCATTCCGAAGTTTATTGCGATGCCGTGCCCTAGGGAACCGTTGCGGCCGGAGATGATTGAGGTGAAAGTGGAGAAGCCGTTAAAGCCGCTGCGAATTGCGGTTCCTTTCTATTAGCCGACTCAGATTCAGATTCAGTTTCACCATTGATTGATGTGTGTACATAGATAGTAGAAACAAATGAATTCTTTTGAGTTTCATCTGTTTTTTCTTTCCTTGTGAAAAGGAATTTCAATGGCTTCCAATTTCATTATTGTGTATATTTCAATTTCACAAGCGTTCATCACCAAGTTTCGTATCTGCCTTTGCCGCAGTTACAAACTTACGGAGGAAAAAAAAAAAAAAAGAAAAAAAAAAAGAGAGGAGCGTAATTATTATGAATTAAAAGCAGTTTATTTTATTAATGTTCTGTTTCACTCTAATTCCTTTTTGATGTTTAACGAAATGATTTGTGAAAGCAATTAAAAACAGAGCACTAACCAACCCAATGAATATGCTT

Coding sequence (CDS)

ATGGAGAGTCCCAATTTCTCTCCCCCTCACTCCGACCCATCCCGACCCTCCTTAGGCTTTCCCCTCGGCACTGCTCTTCTCCTTCTCGTTATCTTCACCTTGAGCGGAATCTTCTCCTGTTGCTATCACTGGGACAAACTCAGATCCCTCCGCCGTTCCACTTCTCAACCCTTACGCGATCGTCACGATCTTCACCCACAATCACCTCCCTCCAAATCCAACCCTACTCAGGATTTGGAGAAGAACCAGAGAGAAAGCTTGTCGGTGTTGATGCCTGGGGATTCCATTCCGAAGTTTATTGCGATGCCGTGCCCTAGGGAACCGTTGCGGCCGGAGATGATTGAGGTGAAAGTGGAGAAGCCGTTAAAGCCGCTGCGAATTGCGGTTCCTTTCTATTAG

Protein sequence

MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSTSQPLRDRHDLHPQSPPSKSNPTQDLEKNQRESLSVLMPGDSIPKFIAMPCPREPLRPEMIEVKVEKPLKPLRIAVPFY

Homology

[Close]

BLAST of Cmc08g0214541 vs. NCBI nr
Match: XP_008440504.1 (PREDICTED: uncharacterized protein At5g65660 [Cucumis melo])

HSP 1 Score: 269.6 bits (688), Expect = 1.4e-68
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSTSQPLRD 60
           MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSTSQPLRD
Sbjct: 1   MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSTSQPLRD 60

Query: 61  RHDLHPQSPPSKSNPTQDLEKNQRESLSVLMPGDSIPKFIAMPCPREPLRPEMIEVKVEK 120
           RHDLHPQSPPSKSNPTQDLEKNQRESLSVLMPGDSIPKFIAMPCPREPLRPEMIEVKVEK
Sbjct: 61  RHDLHPQSPPSKSNPTQDLEKNQRESLSVLMPGDSIPKFIAMPCPREPLRPEMIEVKVEK 120

Query: 121 PLKPLRIAVPFY 133
           PLKPLRIAVPFY
Sbjct: 121 PLKPLRIAVPFY 132

[Close]

BLAST of Cmc08g0214541 vs. NCBI nr
Match: XP_004143432.1 (uncharacterized protein At5g65660 [Cucumis sativus] >KGN48673.1 hypothetical protein Csa_003210 [Cucumis sativus])

HSP 1 Score: 250.8 bits (639), Expect = 6.7e-63
Identity = 124/132 (93.94%), Postives = 126/132 (95.45%), Query Frame = 0


Query: 1   MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSTSQPLRD 60
           MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRS+SQPLRD
Sbjct: 1   MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRD 60

Query: 61  RHDLHPQSPPSKSNPTQDLEKNQRESLSVLMPGDSIPKFIAMPCPREPLRPEMIEVKVEK 120
              LH QSPPSKSNPT DLEKNQRESLSVLMPGDSIPKFIAMPCPREPLRPE IEVKVEK
Sbjct: 61  HRHLHLQSPPSKSNPTPDLEKNQRESLSVLMPGDSIPKFIAMPCPREPLRPETIEVKVEK 120

Query: 121 PLKPLRIAVPFY 133
           P+KPLRIAVPFY
Sbjct: 121 PVKPLRIAVPFY 132

[Close]

BLAST of Cmc08g0214541 vs. NCBI nr
Match: XP_038881262.1 (uncharacterized protein At5g65660-like [Benincasa hispida])

HSP 1 Score: 228.4 bits (581), Expect = 3.6e-56
Identity = 119/133 (89.47%), Postives = 122/133 (91.73%), Query Frame = 0


Query: 1   MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSTSQPLRD 60
           MESP+FSPPH+D SRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRS SQPL D
Sbjct: 1   MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLHD 60

Query: 61  RHDLHPQSPPSKSNPT-QDLEKNQRESLSVLMPGDSIPKFIAMPCPREPLRPEMIEVKVE 120
             DLH +S PSKSNPT QDLEKNQRESLSVLMPGDSIPKFIAMPCPREP R EMIEVKVE
Sbjct: 61  -DDLHLRSSPSKSNPTSQDLEKNQRESLSVLMPGDSIPKFIAMPCPREPPRAEMIEVKVE 120

Query: 121 KPLKPLRIAVPFY 133
           KP KPLRIAVPFY
Sbjct: 121 KPPKPLRIAVPFY 132

[Close]

BLAST of Cmc08g0214541 vs. NCBI nr
Match: XP_023518276.1 (uncharacterized protein At5g65660-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 214.5 bits (545), Expect = 5.4e-52
Identity = 110/133 (82.71%), Postives = 118/133 (88.72%), Query Frame = 0


Query: 1   MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSTSQPLRD 60
           ME+P+FSPPH+D SRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRS+RRS +Q L  
Sbjct: 60  METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHH 119

Query: 61  RHDLHPQSPPSKSNPTQ-DLEKNQRESLSVLMPGDSIPKFIAMPCPREPLRPEMIEVKVE 120
            H L P S PSKSNPT  DLEKNQRESLSV+MPGDSIPKFIAMPCPREP RPEMI+VKVE
Sbjct: 120 DHHLLPSS-PSKSNPTALDLEKNQRESLSVVMPGDSIPKFIAMPCPREPPRPEMIQVKVE 179

Query: 121 KPLKPLRIAVPFY 133
           KP KP RIA+PFY
Sbjct: 180 KPPKPPRIAIPFY 191

[Close]

BLAST of Cmc08g0214541 vs. NCBI nr
Match: XP_022962719.1 (uncharacterized protein At5g65660-like [Cucurbita moschata] >KAG6594923.1 hypothetical protein SDJN03_11476, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026886.1 hypothetical protein SDJN02_10893, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 210.3 bits (534), Expect = 1.0e-50
Identity = 104/132 (78.79%), Postives = 113/132 (85.61%), Query Frame = 0


Query: 1   MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSTSQPLRD 60
           ME+P+FSPPH+D SRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRS+RRS +Q L  
Sbjct: 1   METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHH 60

Query: 61  RHDLHPQSPPSKSNPTQDLEKNQRESLSVLMPGDSIPKFIAMPCPREPLRPEMIEVKVEK 120
            H L P SP   ++   DLEKNQRESLSV+MPGDSIPKFIAMPCPREP RPEMI VKVEK
Sbjct: 61  DHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFIAMPCPREPPRPEMIHVKVEK 120

Query: 121 PLKPLRIAVPFY 133
           P KP RIA+PFY
Sbjct: 121 PPKPPRIAIPFY 132

[Close]

BLAST of Cmc08g0214541 vs. ExPASy Swiss-Prot
Match: Q9LSK9 (Uncharacterized protein At5g65660 OS=Arabidopsis thaliana OX=3702 GN=At5g65660 PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.3e-32
Identity = 76/133 (57.14%), Postives = 92/133 (69.17%), Query Frame = 0


Query: 5   NFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSTSQPLRDRHDL 64
           +FSPPH D SRPSLGFPLGTALLL++IF+LSGIFSCCYHWDK RSLRRS +   R   D+
Sbjct: 6   DFSPPHMDASRPSLGFPLGTALLLIIIFSLSGIFSCCYHWDKHRSLRRSLANG-RPSADI 65

Query: 65  HPQSPPSKSNPTQDLEKNQRESLSVLMPGDSIPKFIAMPCPREPLRPEMIEVKVE----- 124
              +P     P  +++K Q  S+ VLMPGD+ PKFIA+PCP  P RPE + V V+     
Sbjct: 66  E-SNPYKPKPPFPEMKKPQNLSVPVLMPGDNTPKFIALPCPCAPPRPEKLTVDVQTPPQS 125

Query: 125 KPLKPLRIAVPFY 133
            P+KP R  VP Y
Sbjct: 126 PPVKPARFPVPLY 136

[Close]

BLAST of Cmc08g0214541 vs. ExPASy TrEMBL
Match: A0A1S3B1W3 (uncharacterized protein At5g65660 OS=Cucumis melo OX=3656 GN=LOC103484911 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 6.8e-69
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSTSQPLRD 60
           MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSTSQPLRD
Sbjct: 1   MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSTSQPLRD 60

Query: 61  RHDLHPQSPPSKSNPTQDLEKNQRESLSVLMPGDSIPKFIAMPCPREPLRPEMIEVKVEK 120
           RHDLHPQSPPSKSNPTQDLEKNQRESLSVLMPGDSIPKFIAMPCPREPLRPEMIEVKVEK
Sbjct: 61  RHDLHPQSPPSKSNPTQDLEKNQRESLSVLMPGDSIPKFIAMPCPREPLRPEMIEVKVEK 120

Query: 121 PLKPLRIAVPFY 133
           PLKPLRIAVPFY
Sbjct: 121 PLKPLRIAVPFY 132

[Close]

BLAST of Cmc08g0214541 vs. ExPASy TrEMBL
Match: A0A0A0KGL6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G497240 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 3.3e-63
Identity = 124/132 (93.94%), Postives = 126/132 (95.45%), Query Frame = 0


Query: 1   MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSTSQPLRD 60
           MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRS+SQPLRD
Sbjct: 1   MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRD 60

Query: 61  RHDLHPQSPPSKSNPTQDLEKNQRESLSVLMPGDSIPKFIAMPCPREPLRPEMIEVKVEK 120
              LH QSPPSKSNPT DLEKNQRESLSVLMPGDSIPKFIAMPCPREPLRPE IEVKVEK
Sbjct: 61  HRHLHLQSPPSKSNPTPDLEKNQRESLSVLMPGDSIPKFIAMPCPREPLRPETIEVKVEK 120

Query: 121 PLKPLRIAVPFY 133
           P+KPLRIAVPFY
Sbjct: 121 PVKPLRIAVPFY 132

[Close]

BLAST of Cmc08g0214541 vs. ExPASy TrEMBL
Match: A0A6J1HHX0 (uncharacterized protein At5g65660-like OS=Cucurbita moschata OX=3662 GN=LOC111463125 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 4.9e-51
Identity = 104/132 (78.79%), Postives = 113/132 (85.61%), Query Frame = 0


Query: 1   MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSTSQPLRD 60
           ME+P+FSPPH+D SRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRS+RRS +Q L  
Sbjct: 1   METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHH 60

Query: 61  RHDLHPQSPPSKSNPTQDLEKNQRESLSVLMPGDSIPKFIAMPCPREPLRPEMIEVKVEK 120
            H L P SP   ++   DLEKNQRESLSV+MPGDSIPKFIAMPCPREP RPEMI VKVEK
Sbjct: 61  DHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFIAMPCPREPPRPEMIHVKVEK 120

Query: 121 PLKPLRIAVPFY 133
           P KP RIA+PFY
Sbjct: 121 PPKPPRIAIPFY 132

[Close]

BLAST of Cmc08g0214541 vs. ExPASy TrEMBL
Match: A0A6J1BVL2 (uncharacterized protein At5g65660 OS=Momordica charantia OX=3673 GN=LOC111005755 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.4e-50
Identity = 110/133 (82.71%), Postives = 114/133 (85.71%), Query Frame = 0


Query: 1   MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSTSQPLRD 60
           MESP+FSPPH+D SRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRS SQ    
Sbjct: 1   MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQ---- 60

Query: 61  RHDLHPQSPPSKSNPTQ-DLEKNQRESLSVLMPGDSIPKFIAMPCPREPLRPEMIEVKVE 120
              LH  S PSKSNP   DLE NQR+SLSVLMPGDSIPKFIAMPCPREP RPEMI+VKVE
Sbjct: 61  HPHLHLPSSPSKSNPNSLDLETNQRDSLSVLMPGDSIPKFIAMPCPREPPRPEMIQVKVE 120

Query: 121 KPLKPLRIAVPFY 133
           KP KP RIAVPFY
Sbjct: 121 KPPKPPRIAVPFY 129

[Close]

BLAST of Cmc08g0214541 vs. ExPASy TrEMBL
Match: A0A6J1KQE2 (uncharacterized protein At5g65660-like OS=Cucurbita maxima OX=3661 GN=LOC111497312 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.4e-50
Identity = 103/132 (78.03%), Postives = 113/132 (85.61%), Query Frame = 0


Query: 1   MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSTSQPLRD 60
           ME+P+FSPPH+D SRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRS+RRS +Q L  
Sbjct: 60  METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHH 119

Query: 61  RHDLHPQSPPSKSNPTQDLEKNQRESLSVLMPGDSIPKFIAMPCPREPLRPEMIEVKVEK 120
            H L P SP   ++   DLEKNQRESLSV+MPGDSIPKFIAMPCPREP RPEMI+V VEK
Sbjct: 120 DHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFIAMPCPREPPRPEMIQVIVEK 179

Query: 121 PLKPLRIAVPFY 133
           P KP RIA+PFY
Sbjct: 180 PPKPPRIAIPFY 191

[Close]

BLAST of Cmc08g0214541 vs. TAIR 10
Match: AT5G65660.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 140.6 bits (353), Expect = 9.2e-34
Identity = 76/133 (57.14%), Postives = 92/133 (69.17%), Query Frame = 0


Query: 5   NFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSTSQPLRDRHDL 64
           +FSPPH D SRPSLGFPLGTALLL++IF+LSGIFSCCYHWDK RSLRRS +   R   D+
Sbjct: 6   DFSPPHMDASRPSLGFPLGTALLLIIIFSLSGIFSCCYHWDKHRSLRRSLANG-RPSADI 65

Query: 65  HPQSPPSKSNPTQDLEKNQRESLSVLMPGDSIPKFIAMPCPREPLRPEMIEVKVE----- 124
              +P     P  +++K Q  S+ VLMPGD+ PKFIA+PCP  P RPE + V V+     
Sbjct: 66  E-SNPYKPKPPFPEMKKPQNLSVPVLMPGDNTPKFIALPCPCAPPRPEKLTVDVQTPPQS 125

Query: 125 KPLKPLRIAVPFY 133
            P+KP R  VP Y
Sbjct: 126 PPVKPARFPVPLY 136

The following BLAST results are available for this feature:

BLAST of Cmc08g0214541 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008440504.1	1.4e-68	100.00	PREDICTED: uncharacterized protein At5g65660 [Cucumis melo]	[more]
XP_004143432.1	6.7e-63	93.94	uncharacterized protein At5g65660 [Cucumis sativus] >KGN48673.1 hypothetical pro...	[more]
XP_038881262.1	3.6e-56	89.47	uncharacterized protein At5g65660-like [Benincasa hispida]	[more]
XP_023518276.1	5.4e-52	82.71	uncharacterized protein At5g65660-like [Cucurbita pepo subsp. pepo]	[more]
XP_022962719.1	1.0e-50	78.79	uncharacterized protein At5g65660-like [Cucurbita moschata] >KAG6594923.1 hypoth...	[more]

BLAST of Cmc08g0214541 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSK9	1.3e-32	57.14	Uncharacterized protein At5g65660 OS=Arabidopsis thaliana OX=3702 GN=At5g65660 P...	[more]

BLAST of Cmc08g0214541 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B1W3	6.8e-69	100.00	uncharacterized protein At5g65660 OS=Cucumis melo OX=3656 GN=LOC103484911 PE=4 S...	[more]
A0A0A0KGL6	3.3e-63	93.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G497240 PE=4 SV=1	[more]
A0A6J1HHX0	4.9e-51	78.79	uncharacterized protein At5g65660-like OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A6J1BVL2	1.4e-50	82.71	uncharacterized protein At5g65660 OS=Momordica charantia OX=3673 GN=LOC111005755...	[more]
A0A6J1KQE2	2.4e-50	78.03	uncharacterized protein At5g65660-like OS=Cucurbita maxima OX=3661 GN=LOC1114973...	[more]

BLAST of Cmc08g0214541 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65660.1	9.2e-34	57.14	hydroxyproline-rich glycoprotein family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..67
None	No IPR available	PANTHER	PTHR34291:SF11	SUBFAMILY NOT NAMED	coord: 5..132
IPR037699	Uncharacterized protein At5g65660-like	PANTHER	PTHR34291	HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN	coord: 5..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0214541.1	Cmc08g0214541.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane