Cmc07g0197321 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0197321
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ty3/gypsy retrotransposon protein
Location	CMiso1.1chr07: 20614696 .. 20615052 (+)
RNA-Seq Expression	Cmc07g0197321
Synteny	Cmc07g0197321

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAGCTGGTTGATGAGATGTTATCATCCGGGATTATACAACCAAGTTCCAGCCCGTATTCCAGCCCTGGACTACTCATCAAAAAGAAAGATGGAAGCTGGAGATTTTGTGTGGACTACCGCACGCTCAACAACGTAACAATACCAGATAAGTTTCCTATTCCCGTTATAGAAGAATTATTTGATGAGTTAAATGGTGCAAATCTGTTTTCTAAAATTGATTTAAAGTCTGGATATCATCAGATAAAAATGCATAAGGAAGATGTAGAAAAAACTGCATTTAGAACACATGAGGGACACTATGAATTTTTAGTGATGCCTTTCAGGTTAACAAATGCGCCGGCCACATTCTAA

mRNA sequence

ATGGAGAAGCTGGTTGATGAGATGTTATCATCCGGGATTATACAACCAAGTTCCAGCCCGTATTCCAGCCCTGGACTACTCATCAAAAAGAAAGATGGAAGCTGGAGATTTTGTGTGGACTACCGCACGCTCAACAACGTAACAATACCAGATAAGTTTCCTATTCCCGTTATAGAAGAATTATTTGATGAGTTAAATGGTGCAAATCTGTTTTCTAAAATTGATTTAAAGTCTGGATATCATCAGATAAAAATGCATAAGGAAGATGTAGAAAAAACTGCATTTAGAACACATGAGGGACACTATGAATTTTTAGTGATGCCTTTCAGGTTAACAAATGCGCCGGCCACATTCTAA

Coding sequence (CDS)

ATGGAGAAGCTGGTTGATGAGATGTTATCATCCGGGATTATACAACCAAGTTCCAGCCCGTATTCCAGCCCTGGACTACTCATCAAAAAGAAAGATGGAAGCTGGAGATTTTGTGTGGACTACCGCACGCTCAACAACGTAACAATACCAGATAAGTTTCCTATTCCCGTTATAGAAGAATTATTTGATGAGTTAAATGGTGCAAATCTGTTTTCTAAAATTGATTTAAAGTCTGGATATCATCAGATAAAAATGCATAAGGAAGATGTAGAAAAAACTGCATTTAGAACACATGAGGGACACTATGAATTTTTAGTGATGCCTTTCAGGTTAACAAATGCGCCGGCCACATTCTAA

Protein sequence

MEKLVDEMLSSGIIQPSSSPYSSPGLLIKKKDGSWRFCVDYRTLNNVTIPDKFPIPVIEELFDELNGANLFSKIDLKSGYHQIKMHKEDVEKTAFRTHEGHYEFLVMPFRLTNAPATF

Homology

[Close]

BLAST of Cmc07g0197321 vs. NCBI nr
Match: TYK23090.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 223.0 bits (567), Expect = 1.3e-54
Identity = 100/118 (84.75%), Postives = 114/118 (96.61%), Query Frame = 0


Query: 1   MEKLVDEMLSSGIIQPSSSPYSSPGLLIKKKDGSWRFCVDYRTLNNVTIPDKFPIPVIEE 60
           ME+LVDEMLSSGII+PS+SPYSSP LL++KKDGSWRFCVDYR LNNVT+PDKFPIPV+EE
Sbjct: 638 MERLVDEMLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVVEE 697

Query: 61  LFDELNGANLFSKIDLKSGYHQIKMHKEDVEKTAFRTHEGHYEFLVMPFRLTNAPATF 119
           LFDELNGA++FSKIDLK+GYHQI+MH ED+EKTAFRTHEGHYEF+VMPF LTNAP+TF
Sbjct: 698 LFDELNGADVFSKIDLKAGYHQIRMHPEDIEKTAFRTHEGHYEFMVMPFGLTNAPSTF 755

[Close]

BLAST of Cmc07g0197321 vs. NCBI nr
Match: TYK15990.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 223.0 bits (567), Expect = 1.3e-54
Identity = 100/118 (84.75%), Postives = 114/118 (96.61%), Query Frame = 0


Query: 1   MEKLVDEMLSSGIIQPSSSPYSSPGLLIKKKDGSWRFCVDYRTLNNVTIPDKFPIPVIEE 60
           ME+LVDEMLSSGII+PS+SPYSSP LL++KKDGSWRFCVDYR LNNVT+PDKFPIPV+EE
Sbjct: 698 MERLVDEMLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVVEE 757

Query: 61  LFDELNGANLFSKIDLKSGYHQIKMHKEDVEKTAFRTHEGHYEFLVMPFRLTNAPATF 119
           LFDELNGA++FSKIDLK+GYHQI+MH ED+EKTAFRTHEGHYEF+VMPF LTNAP+TF
Sbjct: 758 LFDELNGADVFSKIDLKAGYHQIRMHPEDIEKTAFRTHEGHYEFMVMPFGLTNAPSTF 815

[Close]

BLAST of Cmc07g0197321 vs. NCBI nr
Match: KAA0049776.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 223.0 bits (567), Expect = 1.3e-54
Identity = 100/118 (84.75%), Postives = 114/118 (96.61%), Query Frame = 0


Query: 1   MEKLVDEMLSSGIIQPSSSPYSSPGLLIKKKDGSWRFCVDYRTLNNVTIPDKFPIPVIEE 60
           ME+LVDEMLSSGII+PS+SPYSSP LL++KKDGSWRFCVDYR LNNVT+PDKFPIPV+EE
Sbjct: 638 MERLVDEMLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVVEE 697

Query: 61  LFDELNGANLFSKIDLKSGYHQIKMHKEDVEKTAFRTHEGHYEFLVMPFRLTNAPATF 119
           LFDELNGA++FSKIDLK+GYHQI+MH ED+EKTAFRTHEGHYEF+VMPF LTNAP+TF
Sbjct: 698 LFDELNGADVFSKIDLKAGYHQIRMHPEDIEKTAFRTHEGHYEFMVMPFGLTNAPSTF 755

[Close]

BLAST of Cmc07g0197321 vs. NCBI nr
Match: KAA0049630.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 223.0 bits (567), Expect = 1.3e-54
Identity = 100/118 (84.75%), Postives = 114/118 (96.61%), Query Frame = 0


Query: 1   MEKLVDEMLSSGIIQPSSSPYSSPGLLIKKKDGSWRFCVDYRTLNNVTIPDKFPIPVIEE 60
           ME+LVDEMLSSGII+PS+SPYSSP LL++KKDGSWRFCVDYR LNNVT+PDKFPIPV+EE
Sbjct: 698 MERLVDEMLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVVEE 757

Query: 61  LFDELNGANLFSKIDLKSGYHQIKMHKEDVEKTAFRTHEGHYEFLVMPFRLTNAPATF 119
           LFDELNGA++FSKIDLK+GYHQI+MH ED+EKTAFRTHEGHYEF+VMPF LTNAP+TF
Sbjct: 758 LFDELNGADVFSKIDLKAGYHQIRMHPEDIEKTAFRTHEGHYEFMVMPFGLTNAPSTF 815

[Close]

BLAST of Cmc07g0197321 vs. NCBI nr
Match: KAA0066118.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 221.9 bits (564), Expect = 3.0e-54
Identity = 99/118 (83.90%), Postives = 114/118 (96.61%), Query Frame = 0


Query: 1   MEKLVDEMLSSGIIQPSSSPYSSPGLLIKKKDGSWRFCVDYRTLNNVTIPDKFPIPVIEE 60
           ME+LVDEML+SGII+PS+SPYSSP LL++KKDGSWRFCVDYR LNNVT+PDKFPIPV+EE
Sbjct: 278 MERLVDEMLTSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVVEE 337

Query: 61  LFDELNGANLFSKIDLKSGYHQIKMHKEDVEKTAFRTHEGHYEFLVMPFRLTNAPATF 119
           LFDELNGA++FSKIDLK+GYHQI+MH ED+EKTAFRTHEGHYEF+VMPF LTNAP+TF
Sbjct: 338 LFDELNGADVFSKIDLKAGYHQIRMHPEDIEKTAFRTHEGHYEFMVMPFGLTNAPSTF 395

[Close]

BLAST of Cmc07g0197321 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 135.2 bits (339), Expect = 4.8e-31
Identity = 63/118 (53.39%), Postives = 81/118 (68.64%), Query Frame = 0


Query: 1   MEKLVDEMLSSGIIQPSSSPYSSPGLLIKKKDGSWRFCVDYRTLNNVTIPDKFPIPVIEE 60
           + K+V ++L +  I PS SP SSP +L+ KKDG++R CVDYRTLN  TI D FP+P I+ 
Sbjct: 612 INKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDN 671

Query: 61  LFDELNGANLFSKIDLKSGYHQIKMHKEDVEKTAFRTHEGHYEFLVMPFRLTNAPATF 119
           L   +  A +F+ +DL SGYHQI M  +D  KTAF T  G YE+ VMPF L NAP+TF
Sbjct: 672 LLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTF 729

[Close]

BLAST of Cmc07g0197321 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 135.2 bits (339), Expect = 4.8e-31
Identity = 63/118 (53.39%), Postives = 81/118 (68.64%), Query Frame = 0


Query: 1   MEKLVDEMLSSGIIQPSSSPYSSPGLLIKKKDGSWRFCVDYRTLNNVTIPDKFPIPVIEE 60
           + K+V ++L +  I PS SP SSP +L+ KKDG++R CVDYRTLN  TI D FP+P I+ 
Sbjct: 638 INKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDN 697

Query: 61  LFDELNGANLFSKIDLKSGYHQIKMHKEDVEKTAFRTHEGHYEFLVMPFRLTNAPATF 119
           L   +  A +F+ +DL SGYHQI M  +D  KTAF T  G YE+ VMPF L NAP+TF
Sbjct: 698 LLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTF 755

[Close]

BLAST of Cmc07g0197321 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 3.5e-29
Identity = 60/123 (48.78%), Postives = 83/123 (67.48%), Query Frame = 0


Query: 1   MEKLVDEMLSSGIIQPSSSPYSSPGLLIKKKD-----GSWRFCVDYRTLNNVTIPDKFPI 60
           +E  V EML+ G+I+ S+SPY+SP  ++ KK        +R  +DYR LN +TIPD++PI
Sbjct: 222 VENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVIDYRKLNEITIPDRYPI 281

Query: 61  PVIEELFDELNGANLFSKIDLKSGYHQIKMHKEDVEKTAFRTHEGHYEFLVMPFRLTNAP 119
           P ++E+  +L     F+ IDL  G+HQI+M +E + KTAF T  GHYE+L MPF L NAP
Sbjct: 282 PNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNAP 341

[Close]

BLAST of Cmc07g0197321 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 6.5e-28
Identity = 61/123 (49.59%), Postives = 84/123 (68.29%), Query Frame = 0


Query: 1   MEKLVDEMLSSGIIQPSSSPYSSPGLLI-KKKDGS----WRFCVDYRTLNNVTIPDKFPI 60
           +E  + +ML+ GII+ S+SPY+SP  ++ KK+D S    +R  +DYR LN +T+ D+ PI
Sbjct: 223 VESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRHPI 282

Query: 61  PVIEELFDELNGANLFSKIDLKSGYHQIKMHKEDVEKTAFRTHEGHYEFLVMPFRLTNAP 119
           P ++E+  +L   N F+ IDL  G+HQI+M  E V KTAF T  GHYE+L MPF L NAP
Sbjct: 283 PNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKNAP 342

[Close]

BLAST of Cmc07g0197321 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.9e-27
Identity = 60/123 (48.78%), Postives = 80/123 (65.04%), Query Frame = 0


Query: 1   MEKLVDEMLSSGIIQPSSSPYSSPGLLIKKK-----DGSWRFCVDYRTLNNVTIPDKFPI 60
           +E+ +DE+L  GII+PS+SPY+SP  ++ KK     +  +R  VD++ LN VTIPD +PI
Sbjct: 139 VERQIDELLQDGIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYPI 198

Query: 61  PVIEELFDELNGANLFSKIDLKSGYHQIKMHKEDVEKTAFRTHEGHYEFLVMPFRLTNAP 119
           P I      L  A  F+ +DL SG+HQI M + D+ KTAF T  G YEFL +PF L NAP
Sbjct: 199 PDINATLASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNAP 258

[Close]

BLAST of Cmc07g0197321 vs. ExPASy TrEMBL
Match: A0A5D3CXB1 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G001180 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 6.5e-55
Identity = 100/118 (84.75%), Postives = 114/118 (96.61%), Query Frame = 0


Query: 1   MEKLVDEMLSSGIIQPSSSPYSSPGLLIKKKDGSWRFCVDYRTLNNVTIPDKFPIPVIEE 60
           ME+LVDEMLSSGII+PS+SPYSSP LL++KKDGSWRFCVDYR LNNVT+PDKFPIPV+EE
Sbjct: 698 MERLVDEMLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVVEE 757

Query: 61  LFDELNGANLFSKIDLKSGYHQIKMHKEDVEKTAFRTHEGHYEFLVMPFRLTNAPATF 119
           LFDELNGA++FSKIDLK+GYHQI+MH ED+EKTAFRTHEGHYEF+VMPF LTNAP+TF
Sbjct: 758 LFDELNGADVFSKIDLKAGYHQIRMHPEDIEKTAFRTHEGHYEFMVMPFGLTNAPSTF 815

[Close]

BLAST of Cmc07g0197321 vs. ExPASy TrEMBL
Match: A0A5A7U2S1 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold163G00940 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 6.5e-55
Identity = 100/118 (84.75%), Postives = 114/118 (96.61%), Query Frame = 0


Query: 1   MEKLVDEMLSSGIIQPSSSPYSSPGLLIKKKDGSWRFCVDYRTLNNVTIPDKFPIPVIEE 60
           ME+LVDEMLSSGII+PS+SPYSSP LL++KKDGSWRFCVDYR LNNVT+PDKFPIPV+EE
Sbjct: 698 MERLVDEMLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVVEE 757

Query: 61  LFDELNGANLFSKIDLKSGYHQIKMHKEDVEKTAFRTHEGHYEFLVMPFRLTNAPATF 119
           LFDELNGA++FSKIDLK+GYHQI+MH ED+EKTAFRTHEGHYEF+VMPF LTNAP+TF
Sbjct: 758 LFDELNGADVFSKIDLKAGYHQIRMHPEDIEKTAFRTHEGHYEFMVMPFGLTNAPSTF 815

[Close]

BLAST of Cmc07g0197321 vs. ExPASy TrEMBL
Match: A0A5D3DI73 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G00700 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 6.5e-55
Identity = 100/118 (84.75%), Postives = 114/118 (96.61%), Query Frame = 0


Query: 1   MEKLVDEMLSSGIIQPSSSPYSSPGLLIKKKDGSWRFCVDYRTLNNVTIPDKFPIPVIEE 60
           ME+LVDEMLSSGII+PS+SPYSSP LL++KKDGSWRFCVDYR LNNVT+PDKFPIPV+EE
Sbjct: 638 MERLVDEMLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVVEE 697

Query: 61  LFDELNGANLFSKIDLKSGYHQIKMHKEDVEKTAFRTHEGHYEFLVMPFRLTNAPATF 119
           LFDELNGA++FSKIDLK+GYHQI+MH ED+EKTAFRTHEGHYEF+VMPF LTNAP+TF
Sbjct: 698 LFDELNGADVFSKIDLKAGYHQIRMHPEDIEKTAFRTHEGHYEFMVMPFGLTNAPSTF 755

[Close]

BLAST of Cmc07g0197321 vs. ExPASy TrEMBL
Match: A0A5A7U6J3 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold76G001310 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 6.5e-55
Identity = 100/118 (84.75%), Postives = 114/118 (96.61%), Query Frame = 0


Query: 1   MEKLVDEMLSSGIIQPSSSPYSSPGLLIKKKDGSWRFCVDYRTLNNVTIPDKFPIPVIEE 60
           ME+LVDEMLSSGII+PS+SPYSSP LL++KKDGSWRFCVDYR LNNVT+PDKFPIPV+EE
Sbjct: 638 MERLVDEMLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVVEE 697

Query: 61  LFDELNGANLFSKIDLKSGYHQIKMHKEDVEKTAFRTHEGHYEFLVMPFRLTNAPATF 119
           LFDELNGA++FSKIDLK+GYHQI+MH ED+EKTAFRTHEGHYEF+VMPF LTNAP+TF
Sbjct: 698 LFDELNGADVFSKIDLKAGYHQIRMHPEDIEKTAFRTHEGHYEFMVMPFGLTNAPSTF 755

[Close]

BLAST of Cmc07g0197321 vs. ExPASy TrEMBL
Match: A0A5A7T5N7 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G00890 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.5e-54
Identity = 99/118 (83.90%), Postives = 114/118 (96.61%), Query Frame = 0


Query: 1   MEKLVDEMLSSGIIQPSSSPYSSPGLLIKKKDGSWRFCVDYRTLNNVTIPDKFPIPVIEE 60
           ME+LVDEML+SGII+PS+SPYSSP LL++KKDGSWRFCVDYR LNNVT+PDKFPIPV+EE
Sbjct: 52  MERLVDEMLTSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVVEE 111

Query: 61  LFDELNGANLFSKIDLKSGYHQIKMHKEDVEKTAFRTHEGHYEFLVMPFRLTNAPATF 119
           LFDELNGA++FSKIDLK+GYHQI+MH ED+EKTAFRTHEGHYEF+VMPF LTNAP+TF
Sbjct: 112 LFDELNGADVFSKIDLKAGYHQIRMHPEDIEKTAFRTHEGHYEFMVMPFGLTNAPSTF 169

[Close]

BLAST of Cmc07g0197321 vs. TAIR 10
Match: ATMG00850.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 47.8 bits (112), Expect = 7.2e-06
Identity = 21/35 (60.00%), Postives = 27/35 (77.14%), Query Frame = 0


Query: 1  MEKLVDEMLSSGIIQPSSSPYSSPGLLIKKKDGSW 36
          ++  + EML + IIQPS SPYSSP LL++KKDG W
Sbjct: 45 LKNWLGEMLEARIIQPSISPYSSPVLLVQKKDGGW 79

The following BLAST results are available for this feature:

BLAST of Cmc07g0197321 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK23090.1	1.3e-54	84.75	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK15990.1	1.3e-54	84.75	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0049776.1	1.3e-54	84.75	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0049630.1	1.3e-54	84.75	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0066118.1	3.0e-54	83.90	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc07g0197321 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99315	4.8e-31	53.39	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	4.8e-31	53.39	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
P20825	3.5e-29	48.78	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P04323	6.5e-28	49.59	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
Q8I7P9	1.9e-27	48.78	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]

BLAST of Cmc07g0197321 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CXB1	6.5e-55	84.75	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7U2S1	6.5e-55	84.75	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3DI73	6.5e-55	84.75	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7U6J3	6.5e-55	84.75	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7T5N7	1.5e-54	83.90	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]

BLAST of Cmc07g0197321 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00850.1	7.2e-06	60.00	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 1..113 e-value: 5.4E-53 score: 181.4
None	No IPR available	PANTHER	PTHR24559:SF319	SUBFAMILY NOT NAMED	coord: 2..118
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 2..118
None	No IPR available	CDD	cd01647	RT_LTR	coord: 26..118 e-value: 1.18337E-52 score: 161.609
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 53..118 e-value: 5.4E-53 score: 181.4
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 28..118 e-value: 2.5E-11 score: 43.5
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..118

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0197321.1	Cmc07g0197321.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098869	cellular oxidant detoxification
biological_process	GO:0015074	DNA integration
biological_process	GO:0007034	vacuolar transport
cellular_component	GO:0005768	endosome
cellular_component	GO:0016020	membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004601	peroxidase activity