Cmc07g0195511 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0195511
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Pol
Location	CMiso1.1chr07: 18799955 .. 18801646 (-)
RNA-Seq Expression	Cmc07g0195511
Synteny	Cmc07g0195511

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAGGAAAAAGGTGGAATAGAATTAATGTAGTTGTGAACAACATTTTTGCGTATAATGTTGCACATAATATCATTCATGAAAATGGGGATTATGAACCTAAATCTGTTGACGAATGTCGTAATAGAAAGGATTGGTCCAAGTGGAAAGAAGCCATCCAAGCAAAACTAAACTTACTCACGAAACGTGAAGTTTTTGGACCTATAGTTTATACACCTAAAGGTGTAAAACCTGTGGGATTTAAATGGGTATTTGTGTGTAAACGAAATGAAAATAATGAGGTCACTAGATATAAAGCACGACTTGTTGCACAAGGATTTTCTCAAAGACCAGGCATTGATTATGAGGTAACATATTCTCCTGTGGTGGATATTATTACATTAAGATATTTAATTAGTCTGATTGCATGTGAAAATCTTGATATGCATCTTATGGATGTAGTTACAGCATACTTGTATGGATCTTTGGAAAATGAAATCTATATGAAAATCCCTGAAGGATTTAAGATACCTGAATCATATAATTCAAACTCTAGAGAATTATGTCCAATCAAATTACAAAGATCATTATATGGATTGAAACAATCAGGACGAATGTGGTATAATCGCTTAAGTGAATATTTATTGAAAGAAGGTTATCAAAATAATCCAATTTGTCCATGTGTTTTTATTAAGAAATCACAGTCAGGATTTGCGATTATAGCTGTATATGTTGATGATTTAAATATAATTGGAACTCCTGAAGAGCTTTCAAAGGCAATAGAATATCTCAAAAAGGAATTTGAAATAAAAGATCTTGGTAAGACAAAAATTTTTCCTGGCTTACAAATCGAGCATTTAGCCGATGGAATTTTTATTCATCAATCGACATATACAGAAAAGATTTTAAAAAGATTCTACATGGACAAAGCATACCCATTGAACATTCCAATGGTGGTTCGATCACTAGATGTAAAAAAGGATATCTTTCGATCTCGAGAAGATAAGGAAGAATTACTTGGTCCTGAAGTACCGTACCTTAGTGCAATAGGTGCACTAATGTATCTTGCTAATAACACAAGACCAGATATAGCATTTTCAGTAAATTTGTTAGCAAGATATAGTTCTTCTCCAACAAAAAGACATTGGAATGGAGTTAAACATGTACTTCGTCATCTTCGAGGGACAATTGATATGGGTTTGTTTTATTCAAATAAATCAAACTTTGATCTAGTTGGTTATCCGGATGCTGGATATTTATCTGATCCACACAAAGCAAGATCTCAAACAGGTTATCTGTTTACATGTGAAGGAATTGCTATATCTTGGCGGTCTATAAAGCAAACCATGACGACCACTTCATCGAATCATGTAGAAATTCTTGCAACTCATGAAGCTAGTAGAGAATGTGCATGGTTGAGGTCAATGACTCATCATATTCGAGAAACATGTAGTTTGTCTTTCAGTAAAAATTTACCAACAATATTATTTGAAGATAATACCGCATGTATAGCACAAATCAAAGGAGAGTATATAAAAGGAGATAGAACAAAGCATATCTCACCAAAACTCTTCTATACGCATGACCTTGAAGAAAATGGTGACATCAATGTTCAACAAATTTCTTCAAAAGATAACTTGGCAAACTTATTCGCAAAACCATTACCCACATCAACATTTGAAAAACTAGTGCACAACATTGGAATGCGATGA

mRNA sequence

ATGACAGGAAAAAGGTGGAATAGAATTAATGTAGTTGTGAACAACATTTTTGCGTATAATGTTGCACATAATATCATTCATGAAAATGGGGATTATGAACCTAAATCTGTTGACGAATGTCGTAATAGAAAGGATTGGTCCAAGTGGAAAGAAGCCATCCAAGCAAAACTAAACTTACTCACGAAACGTGAAGTTTTTGGACCTATAGTTTATACACCTAAAGGTGTAAAACCTGTGGGATTTAAATGGGTATTTGTGTGTAAACGAAATGAAAATAATGAGGTCACTAGATATAAAGCACGACTTGTTGCACAAGGATTTTCTCAAAGACCAGGCATTGATTATGAGGTAACATATTCTCCTGTGGTGGATATTATTACATTAAGATATTTAATTAGTCTGATTGCATGTGAAAATCTTGATATGCATCTTATGGATGTAGTTACAGCATACTTGTATGGATCTTTGGAAAATGAAATCTATATGAAAATCCCTGAAGGATTTAAGATACCTGAATCATATAATTCAAACTCTAGAGAATTATGTCCAATCAAATTACAAAGATCATTATATGGATTGAAACAATCAGGACGAATGTGGTATAATCGCTTAAGTGAATATTTATTGAAAGAAGGTTATCAAAATAATCCAATTTGTCCATGTGTTTTTATTAAGAAATCACAGTCAGGATTTGCGATTATAGCTGTATATGTTGATGATTTAAATATAATTGGAACTCCTGAAGAGCTTTCAAAGGCAATAGAATATCTCAAAAAGGAATTTGAAATAAAAGATCTTGGTAAGACAAAAATTTTTCCTGGCTTACAAATCGAGCATTTAGCCGATGGAATTTTTATTCATCAATCGACATATACAGAAAAGATTTTAAAAAGATTCTACATGGACAAAGCATACCCATTGAACATTCCAATGGTGGTTCGATCACTAGATGTAAAAAAGGATATCTTTCGATCTCGAGAAGATAAGGAAGAATTACTTGGTCCTGAAGTACCGTACCTTAGTGCAATAGGTGCACTAATGTATCTTGCTAATAACACAAGACCAGATATAGCATTTTCAGTAAATTTGTTAGCAAGATATAGTTCTTCTCCAACAAAAAGACATTGGAATGGAGTTAAACATGTACTTCGTCATCTTCGAGGGACAATTGATATGGGTTTGTTTTATTCAAATAAATCAAACTTTGATCTAGTTGGTTATCCGGATGCTGGATATTTATCTGATCCACACAAAGCAAGATCTCAAACAGGTTATCTGTTTACATGTGAAGGAATTGCTATATCTTGGCGGTCTATAAAGCAAACCATGACGACCACTTCATCGAATCATGTAGAAATTCTTGCAACTCATGAAGCTAGTAGAGAATGTGCATGGTTGAGGTCAATGACTCATCATATTCGAGAAACATGTAGTTTGTCTTTCAGTAAAAATTTACCAACAATATTATTTGAAGATAATACCGCATGTATAGCACAAATCAAAGGAGAGTATATAAAAGGAGATAGAACAAAGCATATCTCACCAAAACTCTTCTATACGCATGACCTTGAAGAAAATGGTGACATCAATGTTCAACAAATTTCTTCAAAAGATAACTTGGCAAACTTATTCGCAAAACCATTACCCACATCAACATTTGAAAAACTAGTGCACAACATTGGAATGCGATGA

Coding sequence (CDS)

ATGACAGGAAAAAGGTGGAATAGAATTAATGTAGTTGTGAACAACATTTTTGCGTATAATGTTGCACATAATATCATTCATGAAAATGGGGATTATGAACCTAAATCTGTTGACGAATGTCGTAATAGAAAGGATTGGTCCAAGTGGAAAGAAGCCATCCAAGCAAAACTAAACTTACTCACGAAACGTGAAGTTTTTGGACCTATAGTTTATACACCTAAAGGTGTAAAACCTGTGGGATTTAAATGGGTATTTGTGTGTAAACGAAATGAAAATAATGAGGTCACTAGATATAAAGCACGACTTGTTGCACAAGGATTTTCTCAAAGACCAGGCATTGATTATGAGGTAACATATTCTCCTGTGGTGGATATTATTACATTAAGATATTTAATTAGTCTGATTGCATGTGAAAATCTTGATATGCATCTTATGGATGTAGTTACAGCATACTTGTATGGATCTTTGGAAAATGAAATCTATATGAAAATCCCTGAAGGATTTAAGATACCTGAATCATATAATTCAAACTCTAGAGAATTATGTCCAATCAAATTACAAAGATCATTATATGGATTGAAACAATCAGGACGAATGTGGTATAATCGCTTAAGTGAATATTTATTGAAAGAAGGTTATCAAAATAATCCAATTTGTCCATGTGTTTTTATTAAGAAATCACAGTCAGGATTTGCGATTATAGCTGTATATGTTGATGATTTAAATATAATTGGAACTCCTGAAGAGCTTTCAAAGGCAATAGAATATCTCAAAAAGGAATTTGAAATAAAAGATCTTGGTAAGACAAAAATTTTTCCTGGCTTACAAATCGAGCATTTAGCCGATGGAATTTTTATTCATCAATCGACATATACAGAAAAGATTTTAAAAAGATTCTACATGGACAAAGCATACCCATTGAACATTCCAATGGTGGTTCGATCACTAGATGTAAAAAAGGATATCTTTCGATCTCGAGAAGATAAGGAAGAATTACTTGGTCCTGAAGTACCGTACCTTAGTGCAATAGGTGCACTAATGTATCTTGCTAATAACACAAGACCAGATATAGCATTTTCAGTAAATTTGTTAGCAAGATATAGTTCTTCTCCAACAAAAAGACATTGGAATGGAGTTAAACATGTACTTCGTCATCTTCGAGGGACAATTGATATGGGTTTGTTTTATTCAAATAAATCAAACTTTGATCTAGTTGGTTATCCGGATGCTGGATATTTATCTGATCCACACAAAGCAAGATCTCAAACAGGTTATCTGTTTACATGTGAAGGAATTGCTATATCTTGGCGGTCTATAAAGCAAACCATGACGACCACTTCATCGAATCATGTAGAAATTCTTGCAACTCATGAAGCTAGTAGAGAATGTGCATGGTTGAGGTCAATGACTCATCATATTCGAGAAACATGTAGTTTGTCTTTCAGTAAAAATTTACCAACAATATTATTTGAAGATAATACCGCATGTATAGCACAAATCAAAGGAGAGTATATAAAAGGAGATAGAACAAAGCATATCTCACCAAAACTCTTCTATACGCATGACCTTGAAGAAAATGGTGACATCAATGTTCAACAAATTTCTTCAAAAGATAACTTGGCAAACTTATTCGCAAAACCATTACCCACATCAACATTTGAAAAACTAGTGCACAACATTGGAATGCGATGA

Protein sequence

MTGKRWNRINVVVNNIFAYNVAHNIIHENGDYEPKSVDECRNRKDWSKWKEAIQAKLNLLTKREVFGPIVYTPKGVKPVGFKWVFVCKRNENNEVTRYKARLVAQGFSQRPGIDYEVTYSPVVDIITLRYLISLIACENLDMHLMDVVTAYLYGSLENEIYMKIPEGFKIPESYNSNSRELCPIKLQRSLYGLKQSGRMWYNRLSEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNIIGTPEELSKAIEYLKKEFEIKDLGKTKIFPGLQIEHLADGIFIHQSTYTEKILKRFYMDKAYPLNIPMVVRSLDVKKDIFRSREDKEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSPTKRHWNGVKHVLRHLRGTIDMGLFYSNKSNFDLVGYPDAGYLSDPHKARSQTGYLFTCEGIAISWRSIKQTMTTTSSNHVEILATHEASRECAWLRSMTHHIRETCSLSFSKNLPTILFEDNTACIAQIKGEYIKGDRTKHISPKLFYTHDLEENGDINVQQISSKDNLANLFAKPLPTSTFEKLVHNIGMR

Homology

[Close]

BLAST of Cmc07g0195511 vs. NCBI nr
Match: RVW59049.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 891.3 bits (2302), Expect = 4.2e-255
Identity = 422/562 (75.09%), Postives = 484/562 (86.12%), Query Frame = 0


Query: 2    TGKRWNRINVVVNNIFAYNVAHNIIHENGDYEPKSVDECRNRKDWSKWKEAIQAKLNLLT 61
            TG++W+R N+V+NNIFA+ VA +II  + D EP++V+ECR+R DW KWKEAIQA+LN LT
Sbjct: 505  TGEKWDRNNIVINNIFAFQVASDIIRNDEDPEPRNVEECRHRNDWPKWKEAIQAELNSLT 564

Query: 62   KREVFGPIVYTPKGVKPVGFKWVFVCKRNENNEVTRYKARLVAQGFSQRPGIDYEVTYSP 121
            KREVFGP+V TP+ VKPVG+KWVFV KRNENNE+ RYKARLVAQGFSQRPGIDYE TYSP
Sbjct: 565  KREVFGPVVQTPEDVKPVGYKWVFVRKRNENNEIIRYKARLVAQGFSQRPGIDYEETYSP 624

Query: 122  VVDIITLRYLISLIACENLDMHLMDVVTAYLYGSLENEIYMKIPEGFKIPESYNSNSREL 181
            V+D IT R+LISL   E LDM LMDV+TAYLYGS++N+IYMKIPEGFK+P++ N+  R +
Sbjct: 625  VMDAITFRFLISLAVSEGLDMRLMDVITAYLYGSMDNDIYMKIPEGFKLPDANNTKPRSM 684

Query: 182  CPIKLQRSLYGLKQSGRMWYNRLSEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDL 241
              IKLQRSLYGLKQSGRMWYNRLSEYLLKEGY NNPICPC+FIKKS++GFAIIAVYVDDL
Sbjct: 685  YSIKLQRSLYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCIFIKKSETGFAIIAVYVDDL 744

Query: 242  NIIGTPEELSKAIEYLKKEFEIKDLGKTKIFPGLQIEHLADGIFIHQSTYTEKILKRFYM 301
            N++GTPEEL++   YLKKEFE+KDLGKTK   GLQIEH  +G+ +HQSTY +K+LKRFYM
Sbjct: 745  NLVGTPEELTRTTNYLKKEFEMKDLGKTKFCLGLQIEHFPNGVLVHQSTYIKKVLKRFYM 804

Query: 302  DKAYPLNIPMVVRSLDVKKDIFRSREDKEELLGPEVPYLSAIGALMYLANNTRPDIAFSV 361
            DKA+PL+ PMVVRSLDVKKD FR  E  EELLGPEVPYLSAIGALMYLAN TRPDIAFSV
Sbjct: 805  DKAHPLSSPMVVRSLDVKKDPFRPCEKDEELLGPEVPYLSAIGALMYLANCTRPDIAFSV 864

Query: 362  NLLARYSSSPTKRHWNGVKHVLRHLRGTIDMGLFYSNKSNFDLVGYPDAGYLSDPHKARS 421
            NLLARYSS+PT+RHWNG+KH+LR+LRGT DMGLFYS +S   L+GY DAGYLSDPHK RS
Sbjct: 865  NLLARYSSAPTRRHWNGIKHILRYLRGTTDMGLFYSRESKQQLLGYADAGYLSDPHKGRS 924

Query: 422  QTGYLFTCEGIAISWRSIKQTMTTTSSNHVEILATHEASRECAWLRSMTHHIRETCSLSF 481
            QTGY+F C G AISWRS+KQTM  TSSNH EILA HEASREC WLRSM  HIRE+C LS 
Sbjct: 925  QTGYVFNCNGTAISWRSVKQTMVATSSNHSEILAIHEASRECIWLRSMIQHIRESCGLSS 984

Query: 482  SKNLPTILFEDNTACIAQIKGEYIKGDRTKHISPKLFYTHDLEENGDINVQQISSKDNLA 541
             K  PT LFEDN ACIAQI G YIKGDRTKHISPK FYTH+L+++G+I+VQQI S DNLA
Sbjct: 985  IKGGPTTLFEDNAACIAQITGGYIKGDRTKHISPKFFYTHELQKSGEIDVQQIRSSDNLA 1044

Query: 542  NLFAKPLPTSTFEKLVHNIGMR 564
            +LF K LPTSTF+KL+H IGMR
Sbjct: 1045 DLFTKSLPTSTFKKLIHRIGMR 1066

[Close]

BLAST of Cmc07g0195511 vs. NCBI nr
Match: RVW51062.1 (Copia protein [Vitis vinifera])

HSP 1 Score: 890.2 bits (2299), Expect = 9.3e-255
Identity = 421/562 (74.91%), Postives = 484/562 (86.12%), Query Frame = 0


Query: 2    TGKRWNRINVVVNNIFAYNVAHNIIHENGDYEPKSVDECRNRKDWSKWKEAIQAKLNLLT 61
            TG++W+R N+V+NNIFA+ VA +II  + D EP++V+ECR+R DW KWKEAIQA+LN LT
Sbjct: 508  TGEKWDRNNIVINNIFAFQVASDIIRNDEDPEPRNVEECRHRNDWPKWKEAIQAELNSLT 567

Query: 62   KREVFGPIVYTPKGVKPVGFKWVFVCKRNENNEVTRYKARLVAQGFSQRPGIDYEVTYSP 121
            KREVFGP+V TP+ VKPVG+KWVFV KRNENNE+ RYKARLVAQGFSQRPGIDYE TYSP
Sbjct: 568  KREVFGPVVQTPEDVKPVGYKWVFVRKRNENNEIIRYKARLVAQGFSQRPGIDYEETYSP 627

Query: 122  VVDIITLRYLISLIACENLDMHLMDVVTAYLYGSLENEIYMKIPEGFKIPESYNSNSREL 181
            V+D IT R+LISL   E LDM LMDV+TAYLYGS++N+IYMKIPEGFK+P++ N+  R +
Sbjct: 628  VMDAITFRFLISLAVSEGLDMRLMDVITAYLYGSMDNDIYMKIPEGFKLPDANNTKPRSM 687

Query: 182  CPIKLQRSLYGLKQSGRMWYNRLSEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDL 241
              IKLQRSLYGLKQSGRMWYNRLSEYLLKEGY NNPICPC+FIKKS++GFAIIAVYVDDL
Sbjct: 688  YSIKLQRSLYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCIFIKKSETGFAIIAVYVDDL 747

Query: 242  NIIGTPEELSKAIEYLKKEFEIKDLGKTKIFPGLQIEHLADGIFIHQSTYTEKILKRFYM 301
            N++GTPEEL++   YLKKEFE+KDLGKTK   GLQIEH  +G+ +HQSTY +K+LKRFYM
Sbjct: 748  NLVGTPEELTRTTNYLKKEFEMKDLGKTKFCLGLQIEHFPNGVLVHQSTYIKKVLKRFYM 807

Query: 302  DKAYPLNIPMVVRSLDVKKDIFRSREDKEELLGPEVPYLSAIGALMYLANNTRPDIAFSV 361
            DKA+PL+ PMVVRSLDVKKD FR  E  EELLGPEVPYL+AIGALMYLAN TRPDIAFSV
Sbjct: 808  DKAHPLSSPMVVRSLDVKKDPFRPCEKDEELLGPEVPYLNAIGALMYLANCTRPDIAFSV 867

Query: 362  NLLARYSSSPTKRHWNGVKHVLRHLRGTIDMGLFYSNKSNFDLVGYPDAGYLSDPHKARS 421
            NLLARYSS+PT+RHWNG+KH+LR+LRGT DMGLFYS +S   L+GY DAGYLSDPHK RS
Sbjct: 868  NLLARYSSAPTRRHWNGIKHILRYLRGTTDMGLFYSRESKQQLLGYADAGYLSDPHKGRS 927

Query: 422  QTGYLFTCEGIAISWRSIKQTMTTTSSNHVEILATHEASRECAWLRSMTHHIRETCSLSF 481
            QTGY+F C G AISWRS+KQTM  TSSNH EILA HEASREC WLRSM  HIRE+C LS 
Sbjct: 928  QTGYVFNCNGTAISWRSVKQTMVATSSNHSEILAIHEASRECIWLRSMIQHIRESCGLSS 987

Query: 482  SKNLPTILFEDNTACIAQIKGEYIKGDRTKHISPKLFYTHDLEENGDINVQQISSKDNLA 541
             K  PT LFEDN ACIAQI G YIKGDRTKHISPK FYTH+L+++G+I+VQQI S DNLA
Sbjct: 988  IKGGPTTLFEDNAACIAQITGGYIKGDRTKHISPKFFYTHELQKSGEIDVQQIRSSDNLA 1047

Query: 542  NLFAKPLPTSTFEKLVHNIGMR 564
            +LF K LPTSTF+KL+H IGMR
Sbjct: 1048 DLFTKSLPTSTFKKLIHRIGMR 1069

[Close]

BLAST of Cmc07g0195511 vs. NCBI nr
Match: RVW50867.1 (Copia protein [Vitis vinifera])

HSP 1 Score: 888.3 bits (2294), Expect = 3.6e-254
Identity = 420/562 (74.73%), Postives = 483/562 (85.94%), Query Frame = 0


Query: 2    TGKRWNRINVVVNNIFAYNVAHNIIHENGDYEPKSVDECRNRKDWSKWKEAIQAKLNLLT 61
            TG++W+R N+V+NNIFA+ VA +II  + D EP++V+ECR+R DW KWKEAIQA+LN LT
Sbjct: 518  TGEKWDRNNIVINNIFAFQVASDIIRNDEDPEPRNVEECRHRNDWPKWKEAIQAELNSLT 577

Query: 62   KREVFGPIVYTPKGVKPVGFKWVFVCKRNENNEVTRYKARLVAQGFSQRPGIDYEVTYSP 121
            KREVFGP+V TP+ VKPVG+KWVFV KRNENNE+ RYKARLVAQGFSQRPGIDYE TYSP
Sbjct: 578  KREVFGPVVQTPEDVKPVGYKWVFVRKRNENNEIIRYKARLVAQGFSQRPGIDYEETYSP 637

Query: 122  VVDIITLRYLISLIACENLDMHLMDVVTAYLYGSLENEIYMKIPEGFKIPESYNSNSREL 181
            V+D IT R+LISL   E LDM LMDV+TAYLYGS++N+IYMKIPEGFK+P++ N+  R +
Sbjct: 638  VMDAITFRFLISLAVSEGLDMRLMDVITAYLYGSMDNDIYMKIPEGFKLPDANNTKPRSM 697

Query: 182  CPIKLQRSLYGLKQSGRMWYNRLSEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDL 241
              IKLQRSLYGLKQSGRMWYNRLSEYLLKEGY NNPICPC+FIKKS++GFAIIAVYVDDL
Sbjct: 698  YSIKLQRSLYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCIFIKKSETGFAIIAVYVDDL 757

Query: 242  NIIGTPEELSKAIEYLKKEFEIKDLGKTKIFPGLQIEHLADGIFIHQSTYTEKILKRFYM 301
            N++GTPEEL++   YLKKEFE+KDLGKTK   GLQIEH  +G+ +HQSTY +K+LKRFYM
Sbjct: 758  NLVGTPEELTRTTNYLKKEFEMKDLGKTKFCLGLQIEHFPNGVLVHQSTYIKKVLKRFYM 817

Query: 302  DKAYPLNIPMVVRSLDVKKDIFRSREDKEELLGPEVPYLSAIGALMYLANNTRPDIAFSV 361
            DKA+PL+ PMVVRSLDVKKD FR  E  EELLGPEVPYLSAIGALMYLAN TRPDIAFSV
Sbjct: 818  DKAHPLSSPMVVRSLDVKKDSFRPCEKDEELLGPEVPYLSAIGALMYLANCTRPDIAFSV 877

Query: 362  NLLARYSSSPTKRHWNGVKHVLRHLRGTIDMGLFYSNKSNFDLVGYPDAGYLSDPHKARS 421
            NLLA+YSS+PT+RHWNG+KH+LR+LRGT DMGLFYS +S   L+GY DAGYLSDPHK RS
Sbjct: 878  NLLAKYSSAPTRRHWNGIKHILRYLRGTTDMGLFYSRESKQQLLGYADAGYLSDPHKGRS 937

Query: 422  QTGYLFTCEGIAISWRSIKQTMTTTSSNHVEILATHEASRECAWLRSMTHHIRETCSLSF 481
            QTGY+F C G AISWRS+KQTM  TSSNH EILA HEASREC WLRSM  HIRE+C LS 
Sbjct: 938  QTGYVFNCNGTAISWRSVKQTMVATSSNHSEILAIHEASRECIWLRSMIQHIRESCGLSS 997

Query: 482  SKNLPTILFEDNTACIAQIKGEYIKGDRTKHISPKLFYTHDLEENGDINVQQISSKDNLA 541
             K  PT LFEDN ACIAQI G YIKGDRTKHISPK FY H+L+++G+I+VQQI S DNLA
Sbjct: 998  IKGGPTTLFEDNAACIAQITGGYIKGDRTKHISPKFFYIHELQKSGEIDVQQIRSSDNLA 1057

Query: 542  NLFAKPLPTSTFEKLVHNIGMR 564
            +LF K LPTSTF+KL+H IGMR
Sbjct: 1058 DLFTKSLPTSTFKKLIHRIGMR 1079

[Close]

BLAST of Cmc07g0195511 vs. NCBI nr
Match: RVX16158.1 (Copia protein [Vitis vinifera])

HSP 1 Score: 886.7 bits (2290), Expect = 1.0e-253
Identity = 420/562 (74.73%), Postives = 483/562 (85.94%), Query Frame = 0


Query: 2    TGKRWNRINVVVNNIFAYNVAHNIIHENGDYEPKSVDECRNRKDWSKWKEAIQAKLNLLT 61
            TG++W+R N+V+NNIFA+ VA +II  + D EP++V+ECR+R DW KWKEAIQA+LN LT
Sbjct: 518  TGEKWDRNNIVINNIFAFQVASDIIRNDEDPEPRNVEECRHRNDWPKWKEAIQAELNSLT 577

Query: 62   KREVFGPIVYTPKGVKPVGFKWVFVCKRNENNEVTRYKARLVAQGFSQRPGIDYEVTYSP 121
            KREVFGP+V TP+ VKPVG+KWVFV KRNENNE+ RYKARLVAQGFSQRPGIDYE TYSP
Sbjct: 578  KREVFGPVVQTPEDVKPVGYKWVFVRKRNENNEIIRYKARLVAQGFSQRPGIDYEETYSP 637

Query: 122  VVDIITLRYLISLIACENLDMHLMDVVTAYLYGSLENEIYMKIPEGFKIPESYNSNSREL 181
            V+D IT R+LISL   E LDM LMDV+TAYLYGS++N+IYMKIPEGFK+P++ N+  R +
Sbjct: 638  VMDAITFRFLISLAVSEGLDMRLMDVITAYLYGSMDNDIYMKIPEGFKLPDANNTKPRSM 697

Query: 182  CPIKLQRSLYGLKQSGRMWYNRLSEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDL 241
              IKLQRSLYGLKQSGRMWYNRLSEYLLK+GY NNPICPC+FIKKS++GFAIIAVYVDDL
Sbjct: 698  YSIKLQRSLYGLKQSGRMWYNRLSEYLLKKGYVNNPICPCIFIKKSETGFAIIAVYVDDL 757

Query: 242  NIIGTPEELSKAIEYLKKEFEIKDLGKTKIFPGLQIEHLADGIFIHQSTYTEKILKRFYM 301
            N++GTPEEL++   YLKKEFE+KDLGKTK   GLQIEH  +G+ +HQSTY +K+LK FYM
Sbjct: 758  NLVGTPEELTRTTNYLKKEFEMKDLGKTKFCLGLQIEHFPNGVLVHQSTYIKKVLKCFYM 817

Query: 302  DKAYPLNIPMVVRSLDVKKDIFRSREDKEELLGPEVPYLSAIGALMYLANNTRPDIAFSV 361
            DKA+PL+ PMVVRSLDVKKD FR  E  EELLGPEVPYLSAIGALMYLAN TRPDIAFSV
Sbjct: 818  DKAHPLSSPMVVRSLDVKKDPFRPCEKDEELLGPEVPYLSAIGALMYLANCTRPDIAFSV 877

Query: 362  NLLARYSSSPTKRHWNGVKHVLRHLRGTIDMGLFYSNKSNFDLVGYPDAGYLSDPHKARS 421
            NLLARYSS+PT+RHWNG+KH+LR+LRGT DMGLFYS +S   L+GY DAGYLSDPHK RS
Sbjct: 878  NLLARYSSTPTRRHWNGIKHILRYLRGTTDMGLFYSRESKQQLLGYADAGYLSDPHKGRS 937

Query: 422  QTGYLFTCEGIAISWRSIKQTMTTTSSNHVEILATHEASRECAWLRSMTHHIRETCSLSF 481
            QTGY+F C G AISWRS+KQTM  TSSNH EILA HEASREC WLRSM  HIRE+C LS 
Sbjct: 938  QTGYVFNCNGTAISWRSVKQTMVATSSNHSEILAIHEASRECIWLRSMIQHIRESCGLSS 997

Query: 482  SKNLPTILFEDNTACIAQIKGEYIKGDRTKHISPKLFYTHDLEENGDINVQQISSKDNLA 541
             K  PT LFEDN ACIAQI G YIKGDRTKHISPK FYTH+L+++G+I+VQQI S DNLA
Sbjct: 998  IKGGPTTLFEDNAACIAQITGGYIKGDRTKHISPKFFYTHELQKSGEIDVQQIRSSDNLA 1057

Query: 542  NLFAKPLPTSTFEKLVHNIGMR 564
            +LF K LPTSTF+KL+H IGMR
Sbjct: 1058 DLFTKSLPTSTFKKLIHRIGMR 1079

[Close]

BLAST of Cmc07g0195511 vs. NCBI nr
Match: RVW51051.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 885.6 bits (2287), Expect = 2.3e-253
Identity = 420/562 (74.73%), Postives = 482/562 (85.77%), Query Frame = 0


Query: 2    TGKRWNRINVVVNNIFAYNVAHNIIHENGDYEPKSVDECRNRKDWSKWKEAIQAKLNLLT 61
            TG++W+R N+V+NNIFA+ VA +II  + D EP++V+ECR+R DW KWKEAIQA+LN LT
Sbjct: 518  TGEKWDRNNIVINNIFAFQVAFDIIRNDEDPEPRNVEECRHRNDWPKWKEAIQAELNSLT 577

Query: 62   KREVFGPIVYTPKGVKPVGFKWVFVCKRNENNEVTRYKARLVAQGFSQRPGIDYEVTYSP 121
            KREVFGP+V TP+ VKPVG+KWVFV KRNENNE+ RYKARLVAQGFSQRPG+DYE TYSP
Sbjct: 578  KREVFGPVVQTPEDVKPVGYKWVFVRKRNENNEIIRYKARLVAQGFSQRPGVDYEETYSP 637

Query: 122  VVDIITLRYLISLIACENLDMHLMDVVTAYLYGSLENEIYMKIPEGFKIPESYNSNSREL 181
            V+D IT R+LISL   E LDM LMDV+TAYLYGS++N+IYMKIPEGFK+P++ N+  R +
Sbjct: 638  VMDAITFRFLISLAVSEGLDMRLMDVITAYLYGSMDNDIYMKIPEGFKLPDANNTKPRSM 697

Query: 182  CPIKLQRSLYGLKQSGRMWYNRLSEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDL 241
              IKLQRSLYGLKQSGRMWYNRLSEYLLKEGY NNPICPC+FIKK ++GFAIIAVYVDDL
Sbjct: 698  YSIKLQRSLYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCIFIKKLETGFAIIAVYVDDL 757

Query: 242  NIIGTPEELSKAIEYLKKEFEIKDLGKTKIFPGLQIEHLADGIFIHQSTYTEKILKRFYM 301
            N++GTPEEL++   YLKKEFE+KDLGKTK   GLQIEH  +G+ +HQSTY +K+LKRFYM
Sbjct: 758  NLVGTPEELTRTTNYLKKEFEMKDLGKTKFCLGLQIEHFPNGVLVHQSTYIKKVLKRFYM 817

Query: 302  DKAYPLNIPMVVRSLDVKKDIFRSREDKEELLGPEVPYLSAIGALMYLANNTRPDIAFSV 361
            DKA+PL+ PMVVRSLDVKKD FR  E  EELLGPEVPYLSAIGALMYLAN TRPDIAFSV
Sbjct: 818  DKAHPLSSPMVVRSLDVKKDPFRPCEKDEELLGPEVPYLSAIGALMYLANCTRPDIAFSV 877

Query: 362  NLLARYSSSPTKRHWNGVKHVLRHLRGTIDMGLFYSNKSNFDLVGYPDAGYLSDPHKARS 421
            NLLARYSSSPT+RHWNG+KH+LR+LRGT DMGLFYS +S   L+GY DAGYLSDPHK RS
Sbjct: 878  NLLARYSSSPTRRHWNGIKHILRYLRGTTDMGLFYSRESKQQLLGYADAGYLSDPHKGRS 937

Query: 422  QTGYLFTCEGIAISWRSIKQTMTTTSSNHVEILATHEASRECAWLRSMTHHIRETCSLSF 481
            QTGY+F   G AISWRS+KQTM  TSSNH EILA HEASREC WLRSM  HIRE+C LS 
Sbjct: 938  QTGYVFNYNGTAISWRSVKQTMVATSSNHSEILAIHEASRECIWLRSMIQHIRESCGLSS 997

Query: 482  SKNLPTILFEDNTACIAQIKGEYIKGDRTKHISPKLFYTHDLEENGDINVQQISSKDNLA 541
             K  PT LFEDN ACIAQI G YIKGDRTKHISPK FYTH+L+++G+I+VQQI S DNLA
Sbjct: 998  IKGDPTTLFEDNAACIAQITGGYIKGDRTKHISPKFFYTHELQKSGEIDVQQIRSSDNLA 1057

Query: 542  NLFAKPLPTSTFEKLVHNIGMR 564
            +LF K LPTSTF+KL+H IGMR
Sbjct: 1058 DLFTKSLPTSTFKKLIHKIGMR 1079

[Close]

BLAST of Cmc07g0195511 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.2e-84
Identity = 187/536 (34.89%), Postives = 300/536 (55.97%), Query Frame = 0


Query: 31   DYEPKSVDECRNRKDWSKWKEAIQAKLNLLTKREVFGPIVYTPKGVKPVGFKWVFVCKRN 90
            D EP+S+ E  +  + ++  +A+Q ++  L K   +  +V  PKG +P+  KWVF  K++
Sbjct: 808  DREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTY-KLVELPKGKRPLKCKWVFKLKKD 867

Query: 91   ENNEVTRYKARLVAQGFSQRPGIDYEVTYSPVVDIITLRYLISLIACENLDMHLMDVVTA 150
             + ++ RYKARLV +GF Q+ GID++  +SPVV + ++R ++SL A  +L++  +DV TA
Sbjct: 868  GDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTA 927

Query: 151  YLYGSLENEIYMKIPEGFKIPESYNSNSRELCPIKLQRSLYGLKQSGRMWYNRLSEYLLK 210
            +L+G LE EIYM+ PEGF++          +C  KL +SLYGLKQ+ R WY +   ++  
Sbjct: 928  FLHGDLEEEIYMEQPEGFEVA----GKKHMVC--KLNKSLYGLKQAPRQWYMKFDSFMKS 987

Query: 211  EGYQNNPICPCVFIKK-SQSGFAIIAVYVDDLNIIGTPEEL-SKAIEYLKKEFEIKDLGK 270
            + Y      PCV+ K+ S++ F I+ +YVDD+ I+G  + L +K    L K F++KDLG 
Sbjct: 988  QTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGP 1047

Query: 271  TKIFPGLQI--EHLADGIFIHQSTYTEKILKRFYMDKAYPLNIPMVVRSLDVKKDIFRSR 330
             +   G++I  E  +  +++ Q  Y E++L+RF M  A P++ P+       KK    + 
Sbjct: 1048 AQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTV 1107

Query: 331  EDKEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSPTKRHWNGVKHVLRHL 390
            E+K  +   +VPY SA+G+LMY    TRPDIA +V +++R+  +P K HW  VK +LR+L
Sbjct: 1108 EEKGNM--AKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYL 1167

Query: 391  RGTIDMGLFYSNKSNFDLVGYPDAGYLSDPHKARSQTGYLFTCEGIAISWRSIKQTMTTT 450
            RGT    L +   S+  L GY DA    D    +S TGYLFT  G AISW+S  Q     
Sbjct: 1168 RGTTGDCLCFGG-SDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVAL 1227

Query: 451  SSNHVEILATHEASRECAWLRSMTHHIRETCSLSFSKNLPTILFEDNTACIAQIKGEYIK 510
            S+   E +A  E  +E  WL+     +              +++ D+ + I   K     
Sbjct: 1228 STTEAEYIAATETGKEMIWLKRFLQELG-------LHQKEYVVYCDSQSAIDLSKNSMYH 1287

Query: 511  GDRTKHISPKLFYTHDLEENGDINVQQISSKDNLANLFAKPLPTSTFEKLVHNIGM 563
              RTKHI  +  +  ++ ++  + V +IS+ +N A++  K +P + FE     +GM
Sbjct: 1288 A-RTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKFELCKELVGM 1325

[Close]

BLAST of Cmc07g0195511 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 309.7 bits (792), Expect = 6.8e-83
Identity = 195/562 (34.70%), Postives = 300/562 (53.38%), Query Frame = 0


Query: 7    NRINVVVNNIFAYNVAHNIIHENGDYEPKSVDECRNRKDWSKWKEAIQAKLNLLTKREVF 66
            N +N VV N      AH I ++     P S DE + R D S W+EAI  +LN       +
Sbjct: 874  NSLNKVVLN------AHTIFND----VPNSFDEIQYRDDKSSWEEAINTELNAHKINNTW 933

Query: 67   GPIVYTPKGVKPVGFKWVFVCKRNENNEVTRYKARLVAQGFSQRPGIDYEVTYSPVVDII 126
              I   P+    V  +WVF  K NE     RYKARLVA+GF+Q+  IDYE T++PV  I 
Sbjct: 934  -TITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARIS 993

Query: 127  TLRYLISLIACENLDMHLMDVVTAYLYGSLENEIYMKIPEGFKIPESYNSNSRELCPIKL 186
            + R+++SL+   NL +H MDV TA+L G+L+ EIYM++P+G       + NS  +C  KL
Sbjct: 994  SFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGI------SCNSDNVC--KL 1053

Query: 187  QRSLYGLKQSGRMWYNRLSEYLLKEGYQNNPICPCVFI--KKSQSGFAIIAVYVDDLNI- 246
             +++YGLKQ+ R W+    + L +  + N+ +  C++I  K + +    + +YVDD+ I 
Sbjct: 1054 NKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIA 1113

Query: 247  IGTPEELSKAIEYLKKEFEIKDLGKTKIFPGLQIEHLADGIFIHQSTYTEKILKRFYMDK 306
             G    ++    YL ++F + DL + K F G++IE   D I++ QS Y +KIL +F M+ 
Sbjct: 1114 TGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMEN 1173

Query: 307  AYPLNIPMVVRSLDVKKDIFRSREDKEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNL 366
               ++ P+  +   +  ++  S ED         P  S IG LMY+   TRPD+  +VN+
Sbjct: 1174 CNAVSTPLPSK---INYELLNSDED------CNTPCRSLIGCLMYIMLCTRPDLTTAVNI 1233

Query: 367  LARYSSSPTKRHWNGVKHVLRHLRGTIDMGLFYSNKSNFD--LVGYPDAGYLSDPHKARS 426
            L+RYSS      W  +K VLR+L+GTIDM L +     F+  ++GY D+ +       +S
Sbjct: 1234 LSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKS 1293

Query: 427  QTGYLFTC-EGIAISWRSIKQTMTTTSSNHVEILATHEASRECAWLRSMTHHIRETCSLS 486
             TGYLF   +   I W + +Q     SS   E +A  EA RE  WL+ +        S++
Sbjct: 1294 TTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFL------LTSIN 1353

Query: 487  FSKNLPTILFEDNTACIAQIKGEYIKGDRTKHISPKLFYTHDLEENGDINVQQISSKDNL 546
                 P  ++EDN  CI+ I        R KHI  K  +  +  +N  I ++ I +++ L
Sbjct: 1354 IKLENPIKIYEDNQGCIS-IANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQL 1400

Query: 547  ANLFAKPLPTSTFEKLVHNIGM 563
            A++F KPLP + F +L   +G+
Sbjct: 1414 ADIFTKPLPAARFVELRDKLGL 1400

[Close]

BLAST of Cmc07g0195511 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 1.8e-67
Identity = 157/516 (30.43%), Postives = 251/516 (48.64%), Query Frame = 0


Query: 48   KWKEAIQAKLNLLTKREVFGPIVYTPKGVKPVGFKWVFVCKRNENNEVTRYKARLVAQGF 107
            +W++A+ +++N       +  +   P  V  VG +W+F  K N +  + RYKARLVA+G+
Sbjct: 950  RWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGY 1009

Query: 108  SQRPGIDYEVTYSPVVDIITLRYLISLIACENLDMHLMDVVTAYLYGSLENEIYMKIPEG 167
            +QRPG+DY  T+SPV+   ++R ++ +    +  +  +DV  A+L G+L +E+YM  P G
Sbjct: 1010 NQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPG 1069

Query: 168  FKIPESYNSNSRELCPIKLQRSLYGLKQSGRMWYNRLSEYLLKEGYQNNPICPCVFIKKS 227
            F          R     +L++++YGLKQ+ R WY  L  YLL  G+ N+     +F+ + 
Sbjct: 1070 FV------DKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQR 1129

Query: 228  QSGFAIIAVYVDDLNIIGTPEELSK-AIEYLKKEFEIKDLGKTKIFPGLQIEHLADGIFI 287
                  + VYVDD+ I G    L K  ++ L + F +K+      F G++ + +  G+ +
Sbjct: 1130 GRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHL 1189

Query: 288  HQSTYTEKILKRFYMDKAYPLNIPMVVRSLDVKKDIFRSREDKEELLGPEVPYLSAIGAL 347
             Q  YT  +L R  M  A P+  PM   +   K  +    +     L     Y   +G+L
Sbjct: 1190 SQRRYTLDLLARTNMLTAKPVATPM---ATSPKLTLHSGTK-----LPDPTEYRGIVGSL 1249

Query: 348  MYLANNTRPDIAFSVNLLARYSSSPTKRHWNGVKHVLRHLRGTIDMGLFYSNKSNFDLVG 407
             YLA  TRPD++++VN L++Y   PT  HWN +K VLR+L GT D G+F    +   L  
Sbjct: 1250 QYLA-FTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHA 1309

Query: 408  YPDAGYLSDPHKARSQTGYLFTCEGIAISWRSIKQTMTTTSSNHVEILATHEASRECAWL 467
            Y DA +  D     S  GY+       ISW S KQ     SS   E  +    S E  W+
Sbjct: 1310 YSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQWI 1369

Query: 468  RSMTHHIRETCSLSFSKNLPTILFEDNTACIAQIKGEYIKGDRTKHISPKLFYTHDLEEN 527
             S+         L    + P +++ DN      +    +   R KHI+    +  +  ++
Sbjct: 1370 CSL------LTELGIQLSHPPVIYCDNVGA-TYLCANPVFHSRMKHIALDYHFIRNQVQS 1429

Query: 528  GDINVQQISSKDNLANLFAKPLPTSTFEKLVHNIGM 563
            G + V  +S+ D LA+   KPL    F+     IG+
Sbjct: 1430 GALRVVHVSTHDQLADTLTKPLSRVAFQNFSRKIGV 1443

[Close]

BLAST of Cmc07g0195511 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.5e-66
Identity = 155/516 (30.04%), Postives = 253/516 (49.03%), Query Frame = 0


Query: 48   KWKEAIQAKLNLLTKREVFGPIVYTPKGVKPVGFKWVFVCKRNENNEVTRYKARLVAQGF 107
            +W+ A+ +++N       +  +   P  V  VG +W+F  K N +  + RYKARLVA+G+
Sbjct: 967  RWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGY 1026

Query: 108  SQRPGIDYEVTYSPVVDIITLRYLISLIACENLDMHLMDVVTAYLYGSLENEIYMKIPEG 167
            +QRPG+DY  T+SPV+   ++R ++ +    +  +  +DV  A+L G+L +++YM  P G
Sbjct: 1027 NQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPG 1086

Query: 168  FKIPESYNSNSRELCPIKLQRSLYGLKQSGRMWYNRLSEYLLKEGYQNNPICPCVFIKKS 227
            F   +  N     +C  KL+++LYGLKQ+ R WY  L  YLL  G+ N+     +F+ + 
Sbjct: 1087 FIDKDRPN----YVC--KLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQR 1146

Query: 228  QSGFAIIAVYVDDLNIIGT-PEELSKAIEYLKKEFEIKDLGKTKIFPGLQIEHLADGIFI 287
                  + VYVDD+ I G  P  L   ++ L + F +KD  +   F G++ + +  G+ +
Sbjct: 1147 GKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTGLHL 1206

Query: 288  HQSTYTEKILKRFYMDKAYPLNIPMVVRSLDVKKDIFRSREDKEELLGPEVPYLSAIGAL 347
             Q  Y   +L R  M  A P+  PM   +   K  ++   +     L     Y   +G+L
Sbjct: 1207 SQRRYILDLLARTNMITAKPVTTPM---APSPKLSLYSGTK-----LTDPTEYRGIVGSL 1266

Query: 348  MYLANNTRPDIAFSVNLLARYSSSPTKRHWNGVKHVLRHLRGTIDMGLFYSNKSNFDLVG 407
             YLA  TRPDI+++VN L+++   PT+ H   +K +LR+L GT + G+F    +   L  
Sbjct: 1267 QYLA-FTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHA 1326

Query: 408  YPDAGYLSDPHKARSQTGYLFTCEGIAISWRSIKQTMTTTSSNHVEILATHEASRECAWL 467
            Y DA +  D     S  GY+       ISW S KQ     SS   E  +    S E  W+
Sbjct: 1327 YSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWI 1386

Query: 468  RSMTHHIRETCSLSFSKNLPTILFEDNTACIAQIKGEYIKGDRTKHISPKLFYTHDLEEN 527
             S+         L      P +++ DN      +    +   R KHI+    +  +  ++
Sbjct: 1387 CSL------LTELGIRLTRPPVIYCDNVGA-TYLCANPVFHSRMKHIAIDYHFIRNQVQS 1446

Query: 528  GDINVQQISSKDNLANLFAKPLPTSTFEKLVHNIGM 563
            G + V  +S+ D LA+   KPL  + F+     IG+
Sbjct: 1447 GALRVVHVSTHDQLADTLTKPLSRTAFQNFASKIGV 1460

[Close]

BLAST of Cmc07g0195511 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 5.9e-26
Identity = 60/138 (43.48%), Postives = 81/138 (58.70%), Query Frame = 0


Query: 337 VPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSPTKRHWNGVKHVLRHLRGTIDMGLFY 396
           VPYLSA+GA+MYL   TRPD+A +V +L++++S P   HW  +K VLR+L+ T   GL +
Sbjct: 4   VPYLSAVGAIMYLMVVTRPDLAAAVGVLSQFASDPCPTHWQALKRVLRYLQSTQTYGLEF 63

Query: 397 SNKSNFDLVGYPDAGYLSDPHKARSQTGYLFTCEGIAISWRSIKQTMTTTSSNHVEILAT 456
           +      LVGY DA +  D    RS +GYLF   G  +SWRS KQ     SS   E +A 
Sbjct: 64  TRAGTAKLVGYSDADWAGDVESRRSTSGYLFKLNGGCVSWRSKKQRTVALSSTEDEYMAL 123

Query: 457 HEASRECAWLRSMTHHIR 475
            EA++E  WL   T   +
Sbjct: 124 SEATQEAVWLTVRTRRTK 141

[Close]

BLAST of Cmc07g0195511 vs. ExPASy TrEMBL
Match: A0A438FGC5 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2905 PE=4 SV=1)

HSP 1 Score: 891.3 bits (2302), Expect = 2.0e-255
Identity = 422/562 (75.09%), Postives = 484/562 (86.12%), Query Frame = 0


Query: 2    TGKRWNRINVVVNNIFAYNVAHNIIHENGDYEPKSVDECRNRKDWSKWKEAIQAKLNLLT 61
            TG++W+R N+V+NNIFA+ VA +II  + D EP++V+ECR+R DW KWKEAIQA+LN LT
Sbjct: 505  TGEKWDRNNIVINNIFAFQVASDIIRNDEDPEPRNVEECRHRNDWPKWKEAIQAELNSLT 564

Query: 62   KREVFGPIVYTPKGVKPVGFKWVFVCKRNENNEVTRYKARLVAQGFSQRPGIDYEVTYSP 121
            KREVFGP+V TP+ VKPVG+KWVFV KRNENNE+ RYKARLVAQGFSQRPGIDYE TYSP
Sbjct: 565  KREVFGPVVQTPEDVKPVGYKWVFVRKRNENNEIIRYKARLVAQGFSQRPGIDYEETYSP 624

Query: 122  VVDIITLRYLISLIACENLDMHLMDVVTAYLYGSLENEIYMKIPEGFKIPESYNSNSREL 181
            V+D IT R+LISL   E LDM LMDV+TAYLYGS++N+IYMKIPEGFK+P++ N+  R +
Sbjct: 625  VMDAITFRFLISLAVSEGLDMRLMDVITAYLYGSMDNDIYMKIPEGFKLPDANNTKPRSM 684

Query: 182  CPIKLQRSLYGLKQSGRMWYNRLSEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDL 241
              IKLQRSLYGLKQSGRMWYNRLSEYLLKEGY NNPICPC+FIKKS++GFAIIAVYVDDL
Sbjct: 685  YSIKLQRSLYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCIFIKKSETGFAIIAVYVDDL 744

Query: 242  NIIGTPEELSKAIEYLKKEFEIKDLGKTKIFPGLQIEHLADGIFIHQSTYTEKILKRFYM 301
            N++GTPEEL++   YLKKEFE+KDLGKTK   GLQIEH  +G+ +HQSTY +K+LKRFYM
Sbjct: 745  NLVGTPEELTRTTNYLKKEFEMKDLGKTKFCLGLQIEHFPNGVLVHQSTYIKKVLKRFYM 804

Query: 302  DKAYPLNIPMVVRSLDVKKDIFRSREDKEELLGPEVPYLSAIGALMYLANNTRPDIAFSV 361
            DKA+PL+ PMVVRSLDVKKD FR  E  EELLGPEVPYLSAIGALMYLAN TRPDIAFSV
Sbjct: 805  DKAHPLSSPMVVRSLDVKKDPFRPCEKDEELLGPEVPYLSAIGALMYLANCTRPDIAFSV 864

Query: 362  NLLARYSSSPTKRHWNGVKHVLRHLRGTIDMGLFYSNKSNFDLVGYPDAGYLSDPHKARS 421
            NLLARYSS+PT+RHWNG+KH+LR+LRGT DMGLFYS +S   L+GY DAGYLSDPHK RS
Sbjct: 865  NLLARYSSAPTRRHWNGIKHILRYLRGTTDMGLFYSRESKQQLLGYADAGYLSDPHKGRS 924

Query: 422  QTGYLFTCEGIAISWRSIKQTMTTTSSNHVEILATHEASRECAWLRSMTHHIRETCSLSF 481
            QTGY+F C G AISWRS+KQTM  TSSNH EILA HEASREC WLRSM  HIRE+C LS 
Sbjct: 925  QTGYVFNCNGTAISWRSVKQTMVATSSNHSEILAIHEASRECIWLRSMIQHIRESCGLSS 984

Query: 482  SKNLPTILFEDNTACIAQIKGEYIKGDRTKHISPKLFYTHDLEENGDINVQQISSKDNLA 541
             K  PT LFEDN ACIAQI G YIKGDRTKHISPK FYTH+L+++G+I+VQQI S DNLA
Sbjct: 985  IKGGPTTLFEDNAACIAQITGGYIKGDRTKHISPKFFYTHELQKSGEIDVQQIRSSDNLA 1044

Query: 542  NLFAKPLPTSTFEKLVHNIGMR 564
            +LF K LPTSTF+KL+H IGMR
Sbjct: 1045 DLFTKSLPTSTFKKLIHRIGMR 1066

[Close]

BLAST of Cmc07g0195511 vs. ExPASy TrEMBL
Match: A0A438ETU3 (Copia protein OS=Vitis vinifera OX=29760 GN=GIP_69 PE=4 SV=1)

HSP 1 Score: 890.2 bits (2299), Expect = 4.5e-255
Identity = 421/562 (74.91%), Postives = 484/562 (86.12%), Query Frame = 0


Query: 2    TGKRWNRINVVVNNIFAYNVAHNIIHENGDYEPKSVDECRNRKDWSKWKEAIQAKLNLLT 61
            TG++W+R N+V+NNIFA+ VA +II  + D EP++V+ECR+R DW KWKEAIQA+LN LT
Sbjct: 508  TGEKWDRNNIVINNIFAFQVASDIIRNDEDPEPRNVEECRHRNDWPKWKEAIQAELNSLT 567

Query: 62   KREVFGPIVYTPKGVKPVGFKWVFVCKRNENNEVTRYKARLVAQGFSQRPGIDYEVTYSP 121
            KREVFGP+V TP+ VKPVG+KWVFV KRNENNE+ RYKARLVAQGFSQRPGIDYE TYSP
Sbjct: 568  KREVFGPVVQTPEDVKPVGYKWVFVRKRNENNEIIRYKARLVAQGFSQRPGIDYEETYSP 627

Query: 122  VVDIITLRYLISLIACENLDMHLMDVVTAYLYGSLENEIYMKIPEGFKIPESYNSNSREL 181
            V+D IT R+LISL   E LDM LMDV+TAYLYGS++N+IYMKIPEGFK+P++ N+  R +
Sbjct: 628  VMDAITFRFLISLAVSEGLDMRLMDVITAYLYGSMDNDIYMKIPEGFKLPDANNTKPRSM 687

Query: 182  CPIKLQRSLYGLKQSGRMWYNRLSEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDL 241
              IKLQRSLYGLKQSGRMWYNRLSEYLLKEGY NNPICPC+FIKKS++GFAIIAVYVDDL
Sbjct: 688  YSIKLQRSLYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCIFIKKSETGFAIIAVYVDDL 747

Query: 242  NIIGTPEELSKAIEYLKKEFEIKDLGKTKIFPGLQIEHLADGIFIHQSTYTEKILKRFYM 301
            N++GTPEEL++   YLKKEFE+KDLGKTK   GLQIEH  +G+ +HQSTY +K+LKRFYM
Sbjct: 748  NLVGTPEELTRTTNYLKKEFEMKDLGKTKFCLGLQIEHFPNGVLVHQSTYIKKVLKRFYM 807

Query: 302  DKAYPLNIPMVVRSLDVKKDIFRSREDKEELLGPEVPYLSAIGALMYLANNTRPDIAFSV 361
            DKA+PL+ PMVVRSLDVKKD FR  E  EELLGPEVPYL+AIGALMYLAN TRPDIAFSV
Sbjct: 808  DKAHPLSSPMVVRSLDVKKDPFRPCEKDEELLGPEVPYLNAIGALMYLANCTRPDIAFSV 867

Query: 362  NLLARYSSSPTKRHWNGVKHVLRHLRGTIDMGLFYSNKSNFDLVGYPDAGYLSDPHKARS 421
            NLLARYSS+PT+RHWNG+KH+LR+LRGT DMGLFYS +S   L+GY DAGYLSDPHK RS
Sbjct: 868  NLLARYSSAPTRRHWNGIKHILRYLRGTTDMGLFYSRESKQQLLGYADAGYLSDPHKGRS 927

Query: 422  QTGYLFTCEGIAISWRSIKQTMTTTSSNHVEILATHEASRECAWLRSMTHHIRETCSLSF 481
            QTGY+F C G AISWRS+KQTM  TSSNH EILA HEASREC WLRSM  HIRE+C LS 
Sbjct: 928  QTGYVFNCNGTAISWRSVKQTMVATSSNHSEILAIHEASRECIWLRSMIQHIRESCGLSS 987

Query: 482  SKNLPTILFEDNTACIAQIKGEYIKGDRTKHISPKLFYTHDLEENGDINVQQISSKDNLA 541
             K  PT LFEDN ACIAQI G YIKGDRTKHISPK FYTH+L+++G+I+VQQI S DNLA
Sbjct: 988  IKGGPTTLFEDNAACIAQITGGYIKGDRTKHISPKFFYTHELQKSGEIDVQQIRSSDNLA 1047

Query: 542  NLFAKPLPTSTFEKLVHNIGMR 564
            +LF K LPTSTF+KL+H IGMR
Sbjct: 1048 DLFTKSLPTSTFKKLIHRIGMR 1069

[Close]

BLAST of Cmc07g0195511 vs. ExPASy TrEMBL
Match: A0A438ET65 (Copia protein OS=Vitis vinifera OX=29760 GN=GIP_127 PE=4 SV=1)

HSP 1 Score: 888.3 bits (2294), Expect = 1.7e-254
Identity = 420/562 (74.73%), Postives = 483/562 (85.94%), Query Frame = 0


Query: 2    TGKRWNRINVVVNNIFAYNVAHNIIHENGDYEPKSVDECRNRKDWSKWKEAIQAKLNLLT 61
            TG++W+R N+V+NNIFA+ VA +II  + D EP++V+ECR+R DW KWKEAIQA+LN LT
Sbjct: 518  TGEKWDRNNIVINNIFAFQVASDIIRNDEDPEPRNVEECRHRNDWPKWKEAIQAELNSLT 577

Query: 62   KREVFGPIVYTPKGVKPVGFKWVFVCKRNENNEVTRYKARLVAQGFSQRPGIDYEVTYSP 121
            KREVFGP+V TP+ VKPVG+KWVFV KRNENNE+ RYKARLVAQGFSQRPGIDYE TYSP
Sbjct: 578  KREVFGPVVQTPEDVKPVGYKWVFVRKRNENNEIIRYKARLVAQGFSQRPGIDYEETYSP 637

Query: 122  VVDIITLRYLISLIACENLDMHLMDVVTAYLYGSLENEIYMKIPEGFKIPESYNSNSREL 181
            V+D IT R+LISL   E LDM LMDV+TAYLYGS++N+IYMKIPEGFK+P++ N+  R +
Sbjct: 638  VMDAITFRFLISLAVSEGLDMRLMDVITAYLYGSMDNDIYMKIPEGFKLPDANNTKPRSM 697

Query: 182  CPIKLQRSLYGLKQSGRMWYNRLSEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDL 241
              IKLQRSLYGLKQSGRMWYNRLSEYLLKEGY NNPICPC+FIKKS++GFAIIAVYVDDL
Sbjct: 698  YSIKLQRSLYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCIFIKKSETGFAIIAVYVDDL 757

Query: 242  NIIGTPEELSKAIEYLKKEFEIKDLGKTKIFPGLQIEHLADGIFIHQSTYTEKILKRFYM 301
            N++GTPEEL++   YLKKEFE+KDLGKTK   GLQIEH  +G+ +HQSTY +K+LKRFYM
Sbjct: 758  NLVGTPEELTRTTNYLKKEFEMKDLGKTKFCLGLQIEHFPNGVLVHQSTYIKKVLKRFYM 817

Query: 302  DKAYPLNIPMVVRSLDVKKDIFRSREDKEELLGPEVPYLSAIGALMYLANNTRPDIAFSV 361
            DKA+PL+ PMVVRSLDVKKD FR  E  EELLGPEVPYLSAIGALMYLAN TRPDIAFSV
Sbjct: 818  DKAHPLSSPMVVRSLDVKKDSFRPCEKDEELLGPEVPYLSAIGALMYLANCTRPDIAFSV 877

Query: 362  NLLARYSSSPTKRHWNGVKHVLRHLRGTIDMGLFYSNKSNFDLVGYPDAGYLSDPHKARS 421
            NLLA+YSS+PT+RHWNG+KH+LR+LRGT DMGLFYS +S   L+GY DAGYLSDPHK RS
Sbjct: 878  NLLAKYSSAPTRRHWNGIKHILRYLRGTTDMGLFYSRESKQQLLGYADAGYLSDPHKGRS 937

Query: 422  QTGYLFTCEGIAISWRSIKQTMTTTSSNHVEILATHEASRECAWLRSMTHHIRETCSLSF 481
            QTGY+F C G AISWRS+KQTM  TSSNH EILA HEASREC WLRSM  HIRE+C LS 
Sbjct: 938  QTGYVFNCNGTAISWRSVKQTMVATSSNHSEILAIHEASRECIWLRSMIQHIRESCGLSS 997

Query: 482  SKNLPTILFEDNTACIAQIKGEYIKGDRTKHISPKLFYTHDLEENGDINVQQISSKDNLA 541
             K  PT LFEDN ACIAQI G YIKGDRTKHISPK FY H+L+++G+I+VQQI S DNLA
Sbjct: 998  IKGGPTTLFEDNAACIAQITGGYIKGDRTKHISPKFFYIHELQKSGEIDVQQIRSSDNLA 1057

Query: 542  NLFAKPLPTSTFEKLVHNIGMR 564
            +LF K LPTSTF+KL+H IGMR
Sbjct: 1058 DLFTKSLPTSTFKKLIHRIGMR 1079

[Close]

BLAST of Cmc07g0195511 vs. ExPASy TrEMBL
Match: A0A438K4P3 (Copia protein OS=Vitis vinifera OX=29760 GN=GIP_114 PE=4 SV=1)

HSP 1 Score: 886.7 bits (2290), Expect = 5.0e-254
Identity = 420/562 (74.73%), Postives = 483/562 (85.94%), Query Frame = 0


Query: 2    TGKRWNRINVVVNNIFAYNVAHNIIHENGDYEPKSVDECRNRKDWSKWKEAIQAKLNLLT 61
            TG++W+R N+V+NNIFA+ VA +II  + D EP++V+ECR+R DW KWKEAIQA+LN LT
Sbjct: 518  TGEKWDRNNIVINNIFAFQVASDIIRNDEDPEPRNVEECRHRNDWPKWKEAIQAELNSLT 577

Query: 62   KREVFGPIVYTPKGVKPVGFKWVFVCKRNENNEVTRYKARLVAQGFSQRPGIDYEVTYSP 121
            KREVFGP+V TP+ VKPVG+KWVFV KRNENNE+ RYKARLVAQGFSQRPGIDYE TYSP
Sbjct: 578  KREVFGPVVQTPEDVKPVGYKWVFVRKRNENNEIIRYKARLVAQGFSQRPGIDYEETYSP 637

Query: 122  VVDIITLRYLISLIACENLDMHLMDVVTAYLYGSLENEIYMKIPEGFKIPESYNSNSREL 181
            V+D IT R+LISL   E LDM LMDV+TAYLYGS++N+IYMKIPEGFK+P++ N+  R +
Sbjct: 638  VMDAITFRFLISLAVSEGLDMRLMDVITAYLYGSMDNDIYMKIPEGFKLPDANNTKPRSM 697

Query: 182  CPIKLQRSLYGLKQSGRMWYNRLSEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDL 241
              IKLQRSLYGLKQSGRMWYNRLSEYLLK+GY NNPICPC+FIKKS++GFAIIAVYVDDL
Sbjct: 698  YSIKLQRSLYGLKQSGRMWYNRLSEYLLKKGYVNNPICPCIFIKKSETGFAIIAVYVDDL 757

Query: 242  NIIGTPEELSKAIEYLKKEFEIKDLGKTKIFPGLQIEHLADGIFIHQSTYTEKILKRFYM 301
            N++GTPEEL++   YLKKEFE+KDLGKTK   GLQIEH  +G+ +HQSTY +K+LK FYM
Sbjct: 758  NLVGTPEELTRTTNYLKKEFEMKDLGKTKFCLGLQIEHFPNGVLVHQSTYIKKVLKCFYM 817

Query: 302  DKAYPLNIPMVVRSLDVKKDIFRSREDKEELLGPEVPYLSAIGALMYLANNTRPDIAFSV 361
            DKA+PL+ PMVVRSLDVKKD FR  E  EELLGPEVPYLSAIGALMYLAN TRPDIAFSV
Sbjct: 818  DKAHPLSSPMVVRSLDVKKDPFRPCEKDEELLGPEVPYLSAIGALMYLANCTRPDIAFSV 877

Query: 362  NLLARYSSSPTKRHWNGVKHVLRHLRGTIDMGLFYSNKSNFDLVGYPDAGYLSDPHKARS 421
            NLLARYSS+PT+RHWNG+KH+LR+LRGT DMGLFYS +S   L+GY DAGYLSDPHK RS
Sbjct: 878  NLLARYSSTPTRRHWNGIKHILRYLRGTTDMGLFYSRESKQQLLGYADAGYLSDPHKGRS 937

Query: 422  QTGYLFTCEGIAISWRSIKQTMTTTSSNHVEILATHEASRECAWLRSMTHHIRETCSLSF 481
            QTGY+F C G AISWRS+KQTM  TSSNH EILA HEASREC WLRSM  HIRE+C LS 
Sbjct: 938  QTGYVFNCNGTAISWRSVKQTMVATSSNHSEILAIHEASRECIWLRSMIQHIRESCGLSS 997

Query: 482  SKNLPTILFEDNTACIAQIKGEYIKGDRTKHISPKLFYTHDLEENGDINVQQISSKDNLA 541
             K  PT LFEDN ACIAQI G YIKGDRTKHISPK FYTH+L+++G+I+VQQI S DNLA
Sbjct: 998  IKGGPTTLFEDNAACIAQITGGYIKGDRTKHISPKFFYTHELQKSGEIDVQQIRSSDNLA 1057

Query: 542  NLFAKPLPTSTFEKLVHNIGMR 564
            +LF K LPTSTF+KL+H IGMR
Sbjct: 1058 DLFTKSLPTSTFKKLIHRIGMR 1079

[Close]

BLAST of Cmc07g0195511 vs. ExPASy TrEMBL
Match: A0A438ETG9 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_1001 PE=4 SV=1)

HSP 1 Score: 885.6 bits (2287), Expect = 1.1e-253
Identity = 420/562 (74.73%), Postives = 482/562 (85.77%), Query Frame = 0


Query: 2    TGKRWNRINVVVNNIFAYNVAHNIIHENGDYEPKSVDECRNRKDWSKWKEAIQAKLNLLT 61
            TG++W+R N+V+NNIFA+ VA +II  + D EP++V+ECR+R DW KWKEAIQA+LN LT
Sbjct: 518  TGEKWDRNNIVINNIFAFQVAFDIIRNDEDPEPRNVEECRHRNDWPKWKEAIQAELNSLT 577

Query: 62   KREVFGPIVYTPKGVKPVGFKWVFVCKRNENNEVTRYKARLVAQGFSQRPGIDYEVTYSP 121
            KREVFGP+V TP+ VKPVG+KWVFV KRNENNE+ RYKARLVAQGFSQRPG+DYE TYSP
Sbjct: 578  KREVFGPVVQTPEDVKPVGYKWVFVRKRNENNEIIRYKARLVAQGFSQRPGVDYEETYSP 637

Query: 122  VVDIITLRYLISLIACENLDMHLMDVVTAYLYGSLENEIYMKIPEGFKIPESYNSNSREL 181
            V+D IT R+LISL   E LDM LMDV+TAYLYGS++N+IYMKIPEGFK+P++ N+  R +
Sbjct: 638  VMDAITFRFLISLAVSEGLDMRLMDVITAYLYGSMDNDIYMKIPEGFKLPDANNTKPRSM 697

Query: 182  CPIKLQRSLYGLKQSGRMWYNRLSEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDL 241
              IKLQRSLYGLKQSGRMWYNRLSEYLLKEGY NNPICPC+FIKK ++GFAIIAVYVDDL
Sbjct: 698  YSIKLQRSLYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCIFIKKLETGFAIIAVYVDDL 757

Query: 242  NIIGTPEELSKAIEYLKKEFEIKDLGKTKIFPGLQIEHLADGIFIHQSTYTEKILKRFYM 301
            N++GTPEEL++   YLKKEFE+KDLGKTK   GLQIEH  +G+ +HQSTY +K+LKRFYM
Sbjct: 758  NLVGTPEELTRTTNYLKKEFEMKDLGKTKFCLGLQIEHFPNGVLVHQSTYIKKVLKRFYM 817

Query: 302  DKAYPLNIPMVVRSLDVKKDIFRSREDKEELLGPEVPYLSAIGALMYLANNTRPDIAFSV 361
            DKA+PL+ PMVVRSLDVKKD FR  E  EELLGPEVPYLSAIGALMYLAN TRPDIAFSV
Sbjct: 818  DKAHPLSSPMVVRSLDVKKDPFRPCEKDEELLGPEVPYLSAIGALMYLANCTRPDIAFSV 877

Query: 362  NLLARYSSSPTKRHWNGVKHVLRHLRGTIDMGLFYSNKSNFDLVGYPDAGYLSDPHKARS 421
            NLLARYSSSPT+RHWNG+KH+LR+LRGT DMGLFYS +S   L+GY DAGYLSDPHK RS
Sbjct: 878  NLLARYSSSPTRRHWNGIKHILRYLRGTTDMGLFYSRESKQQLLGYADAGYLSDPHKGRS 937

Query: 422  QTGYLFTCEGIAISWRSIKQTMTTTSSNHVEILATHEASRECAWLRSMTHHIRETCSLSF 481
            QTGY+F   G AISWRS+KQTM  TSSNH EILA HEASREC WLRSM  HIRE+C LS 
Sbjct: 938  QTGYVFNYNGTAISWRSVKQTMVATSSNHSEILAIHEASRECIWLRSMIQHIRESCGLSS 997

Query: 482  SKNLPTILFEDNTACIAQIKGEYIKGDRTKHISPKLFYTHDLEENGDINVQQISSKDNLA 541
             K  PT LFEDN ACIAQI G YIKGDRTKHISPK FYTH+L+++G+I+VQQI S DNLA
Sbjct: 998  IKGDPTTLFEDNAACIAQITGGYIKGDRTKHISPKFFYTHELQKSGEIDVQQIRSSDNLA 1057

Query: 542  NLFAKPLPTSTFEKLVHNIGMR 564
            +LF K LPTSTF+KL+H IGMR
Sbjct: 1058 DLFTKSLPTSTFKKLIHKIGMR 1079

[Close]

BLAST of Cmc07g0195511 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 247.7 bits (631), Expect = 2.3e-65
Identity = 159/482 (32.99%), Postives = 250/482 (51.87%), Query Frame = 0


Query: 33  EPKSVDECRNRKDWSKWKEAIQAKLNLLTKREVFGPIVYTPKGVKPVGFKWVFVCKRNEN 92
           EP + +E    K++  W  A+  ++  +     +  I   P   KP+G KWV+  K N +
Sbjct: 85  EPSTYNEA---KEFLVWCGAMDDEIGAMETTHTW-EICTLPPNKKPIGCKWVYKIKYNSD 144

Query: 93  NEVTRYKARLVAQGFSQRPGIDYEVTYSPVVDIITLRYLISLIACENLDMHLMDVVTAYL 152
             + RYKARLVA+G++Q+ GID+  T+SPV  + +++ ++++ A  N  +H +D+  A+L
Sbjct: 145 GTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFL 204

Query: 153 YGSLENEIYMKIPEGFKIPESYNSNSRELCPIKLQRSLYGLKQSGRMWYNRLSEYLLKEG 212
            G L+ EIYMK+P G+   +  +     +C +K  +S+YGLKQ+ R W+ + S  L+  G
Sbjct: 205 NGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLK--KSIYGLKQASRQWFLKFSVTLIGFG 264

Query: 213 YQNNPICPCVFIKKSQSGFAIIAVYVDDLNIIGTPE-ELSKAIEYLKKEFEIKDLGKTKI 272
           +  +      F+K + + F  + VYVDD+ I    +  + +    LK  F+++DLG  K 
Sbjct: 265 FVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKY 324

Query: 273 FPGLQIEHLADGIFIHQSTYTEKILKRFYMDKAYPLNIPMVVRSLDVKKDIFRSREDKEE 332
           F GL+I   A GI I Q  Y   +L    +    P ++PM          +  S     +
Sbjct: 325 FLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPM-------DPSVTFSAHSGGD 384

Query: 333 LLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSPTKRHWNGVKHVLRHLRGTID 392
            +  +  Y   IG LMYL   TR DI+F+VN L+++S +P   H   V  +L +++GT+ 
Sbjct: 385 FVDAKA-YRRLIGRLMYL-QITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVG 444

Query: 393 MGLFYSNKSNFDLVGYPDAGYLSDPHKARSQTGYLFTCEGIAISWRSIKQTMTTTSSNHV 452
            GLFYS+++   L  + DA + S     RS  GY        ISW+S KQ + + SS   
Sbjct: 445 QGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEA 504

Query: 453 EILATHEASRECAWLRSMTHHIRETCSLSFSKNLPTILFEDNTACIAQIKGEYIKGDRTK 512
           E  A   A+ E  WL      ++    L  SK  PT+LF DNTA I  I    +  +RTK
Sbjct: 505 EYRALSFATDEMMWLAQFFRELQ----LPLSK--PTLLFCDNTAAI-HIATNAVFHERTK 544

Query: 513 HI 514
           HI
Sbjct: 565 HI 544

[Close]

BLAST of Cmc07g0195511 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 104.8 bits (260), Expect = 2.4e-22
Identity = 69/233 (29.61%), Postives = 113/233 (48.50%), Query Frame = 0


Query: 234 IAVYVDDLNIIGTPEE-LSKAIEYLKKEFEIKDLGKTKIFPGLQIEHLADGIFIHQSTYT 293
           + +YVDD+ + G+    L+  I  L   F +KDLG    F G+QI+    G+F+ Q+ Y 
Sbjct: 3   LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 294 EKILKRFYMDKAYPLNIPMVVRSLDVKKDIFRSREDKEELLGPEVPYLSAIGALMYLANN 353
           E+IL    M    P++ P+ ++          S     +   P   + S +GAL YL   
Sbjct: 63  EQILNNAGMLDCKPMSTPLPLK--------LNSSVSTAKYPDPS-DFRSIVGALQYL-TL 122

Query: 354 TRPDIAFSVNLLARYSSSPTKRHWNGVKHVLRHLRGTIDMGLFYSNKSNFDLVGYPDAGY 413
           TRPDI+++VN++ +    PT   ++ +K VLR+++GTI  GL+    S  ++  + D+ +
Sbjct: 123 TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDW 182

Query: 414 LSDPHKARSQTGYLFTCEGIAISWRSIKQTMTTTSSNHVEILATHEASRECAW 466
                  RS TG+        ISW + +Q   + SS   E  A    + E  W
Sbjct: 183 AGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Cmc07g0195511 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 63.2 bits (152), Expect = 7.9e-10
Identity = 32/79 (40.51%), Postives = 47/79 (59.49%), Query Frame = 0


Query: 347 MYLANNTRPDIAFSVNLLARYSSSPTKRHWNGVKHVLRHLRGTIDMGLFYSNKSNFDLVG 406
           MYL   TRPD+ F+VN L+++SS+        V  VL +++GT+  GLFYS  S+  L  
Sbjct: 1   MYL-TITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKA 60

Query: 407 YPDAGYLSDPHKARSQTGY 426
           + D+ + S P   RS TG+
Sbjct: 61  FADSDWASCPDTRRSVTGF 78

[Close]

BLAST of Cmc07g0195511 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 62.4 bits (150), Expect = 1.4e-09
Identity = 38/102 (37.25%), Postives = 58/102 (56.86%), Query Frame = 0


Query: 33  EPKSVDECRNRKDWSKWKEAIQAKLNLLTKREVFGPIVYTPKGVKPVGFKWVFVCKRNEN 92
           EPKSV        W    +A+Q +L+ L++ + +  +V  P     +G KWVF  K + +
Sbjct: 27  EPKSVIFALKDPGWC---QAMQEELDALSRNKTW-ILVPPPVNQNILGCKWVFKTKLHSD 86

Query: 93  NEVTRYKARLVAQGFSQRPGIDYEVTYSPVVDIITLRYLISL 135
             + R KARLVA+GF Q  GI +  TYSPVV   T+R ++++
Sbjct: 87  GTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNV 124

The following BLAST results are available for this feature:

BLAST of Cmc07g0195511 vs. NCBI nr


Match Name	E-value	Identity	Description
RVW59049.1	4.2e-255	75.09	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]	[more]
RVW51062.1	9.3e-255	74.91	Copia protein [Vitis vinifera]	[more]
RVW50867.1	3.6e-254	74.73	Copia protein [Vitis vinifera]	[more]
RVX16158.1	1.0e-253	74.73	Copia protein [Vitis vinifera]	[more]
RVW51051.1	2.3e-253	74.73	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]	[more]

BLAST of Cmc07g0195511 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	1.2e-84	34.89	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	6.8e-83	34.70	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	1.8e-67	30.43	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	1.5e-66	30.04	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P0CV72	5.9e-26	43.48	Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P...	[more]

BLAST of Cmc07g0195511 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A438FGC5	2.0e-255	75.09	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX...	[more]
A0A438ETU3	4.5e-255	74.91	Copia protein OS=Vitis vinifera OX=29760 GN=GIP_69 PE=4 SV=1	[more]
A0A438ET65	1.7e-254	74.73	Copia protein OS=Vitis vinifera OX=29760 GN=GIP_127 PE=4 SV=1	[more]
A0A438K4P3	5.0e-254	74.73	Copia protein OS=Vitis vinifera OX=29760 GN=GIP_114 PE=4 SV=1	[more]
A0A438ETG9	1.1e-253	74.73	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX...	[more]

BLAST of Cmc07g0195511 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	2.3e-65	32.99	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	2.4e-22	29.61	DNA/RNA polymerases superfamily protein	[more]
ATMG00240.1	7.9e-10	40.51	Gag-Pol-related retrotransposon family protein	[more]
ATMG00820.1	1.4e-09	37.25	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 69..311 e-value: 3.1E-61 score: 207.1
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 30..414
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 405..550 e-value: 1.71207E-42 score: 146.844
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 70..467

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0195511.1	Cmc07g0195511.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding