Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCCATCATCTTCTTCACAAAGGAAAGGAAAAGAGAAACCCTAACTTTGCAACCCGCCATCGCCACTCCGCCGACGTCAGTCCGAACCGATCGGCTACATCAGATGCGTCGTCTTCACCGTTCGAAGTCGCATCGCTCCACTATAGTCGAACCATTCACGATCGCCAGCCGTCACGTGAAGCTTCGTCGTGTCGTACCGCCGAGCAGCAGCCATCGTCGATCGTCAGCCGCACGTCTTCAGCCGTTCACAATCGTCGAGCCATCTTCGTTGAGCCATCCGAGTCGTCGTTGGGTGTCAGCTGCAAGCAACTTGAGCCGATTCGCCCTCAACCCAACCTGTGTGAGTCCGTCCGTGTCAGCTGCCAGCATGGATTCGAGCCGCACGTGGCCCCAGCCGAGCGGCGCCTCCCCTCTGCGAGCCACGCCTGCCTCCCAACCGAGCCGCCAAGCTTTTTGTGAGCCACAAGCTTGTTTTTTTTTGGGTCATTTCCACCTGTTTTTGGTAAGTTTTGATTGGGTTTTGGTATGCCCAACTAAGTTTAATTTTTGGACCTAAATAATTTAATTTTGGATTAAATTAAATTATTAATTTTGGATTAAATTAAATTATTAATTTTTCTAAAGGACCAGTTGAATCAATTGAAGTTTGGGCTGTGGAACTCTTTCTAGTTAAAGGAAATTGTTGCAACCTTGATATTGGGTAAGCTGATTCAACTGGAGTTTTTTAACCTTTAATTCCTTGGGGGTCAAGTTATTAATTGGTGTTTTCTAACTATTTAGGACTTCGTTGGTTGGAAAGCGTGTTTTGCTGTTAATTTCGACCGAACTAATCTCCAGGTAAGAGATTCTACTACTAGACCCTCAAGCTTTAATTAAGGAAACCACATGTATGCATGGTTATGTACCGATGATGGATAGATACATAATTTGAGGTTACAGACAGAGACTGACATGTATTTATGATTGCTGGTTGACTTTGTGGCTAGAGCTGATAGTACGGTGATGCTATCACCTATGTTTTTTTTTTATATGATATGACATGTTATGATATGATATGATATGATGATGATAAGTTATGTGCATGCTATGGATAGGGTGTATGTTAGCTTTACCTATTAGAGTCGTACCCACATGGGTGTCCCTCGAGATCACCACTTTTTTATGATTGTGTAGTCCGACGGGATTGTAAGTCCATAATGACATTGACATTGACATAGACATGATTTGAGTGATTCGACGAGATCACTCACAGCCCGATCGTCTTAGGTGTTCCTTTGAGTTCACCAAAGCCAGCTTGTTCCTATGGGATCCCAGATTGCACGTGTTCGGGAACGTGTCAGTTCAGGGGTACCACTCTTCAGGACTCTAATAGGAAGTTAACATGCATCTAGCGGGACTAGTAGTGGGTCCCTTACTGAGTATATTTTTGTACTCACTCTTTCTATTTCTATTTTTTCAAGCAGAGGCAGAGAAAAAGGTAAGAGCAAAGACAAGCTGGCGAATGACCAAAAGTGACCGTGCCGAGCCATAGGGACACGTTTGCATCTGCTTATGTCATGTGTCAGATTTCAGTGTTATATTTCCTTTCATTCCATTTATGTTTTACTTATTTCCTTGTTTTTCCTTTAAAACTACTAGGGCCCGAGATAGGATTTTGTTTTAATTTATTCCCATACGCTCTATTTATGAATTTATTAATAATTTGCAGTTTTGTTTTATTTTCTATTTAATTTAAATAAACTTTATTTCTTTTCTTTTAAAGTAAAGTCCTCTACTTAGTGTGAGAGATTGGGTCTTTACATAAACACTCAGGATGTACTTTTGAGAACTAATGTGTGACGATACAACATTATGAACATAAGAGATGGATCGGCTATTCAAGGATGCTTGAGGCTAGGATTGCAAGTCGTTATTGATCAAGGGGGAGTAATCCTATTAATGTTATGATTATTGTTTTTGTGCAAGATAGTTCTAATTGTTGAGTCAGCCCATGGTTAGTACGTTGGTTCATGTTTAGAGTGTTGTACCCTGGTTTATAACATTGTAATGATCAATTACTACACGAGCAATATAATCTCTTATCATGGTTCTAAGATAGATGTGTCATCGAACTGAGTTAACAAAGTTTGTTGTGTTGTCTGTGCTTCCGTAGTTGTTCTTTCTGTTATTAACTTTCG
mRNA sequence
ATGCTCCATCATCTTCTTCACAAAGGAAAGGAAAAGAGAAACCCTAACTTTGCAACCCGCCATCGCCACTCCGCCGACGTCAGTCCGAACCGATCGGCTACATCAGATGCGTCGTCTTCACCGTTCGAAGTCGCATCGCTCCACTATAGTCGAACCATTCACGATCGCCAGCCGTCACGTGAAGCTTCGTCGTGTCGTACCGCCGAGCAGCAGCCATCGTCGATCGTCAGCCGCACGTCTTCAGCCGTTCACAATCGTCGAGCCATCTTCGTTGAGCCATCCGAGTCGTCGTTGGGTGTCAGCTGCAAGCAACTTGAGCCGATTCGCCCTCAACCCAACCTGTGTGAGTCCGTCCGTGTCAGCTGCCAGCATGGATTCGAGCCGCACGTGGCCCCAGCCGAGCGGCGCCTCCCCTCTGCGAGCCACGCCTGCCTCCCAACCGAGCCGCCAAGCTTTTTGTGAGCCACAAGCTTGTTTTTTTTTGGGTCATTTCCACCTGTTTTTGGACCAGTTGAATCAATTGAAGTTTGGGCTGTGGAACTCTTTCTAGTTAAAGGAAATTGTTGCAACCTTGATATTGGGACTTCGTTGGTTGGAAAGCGTGTTTTGCTGTTAATTTCGACCGAACTAATCTCCAGGCAGAGAAAAAGGTAAGAGCAAAGACAAGCTGGCGAATGACCAAAAGTGACCGTGCCGAGCCATAGGGACACGTTTGCATCTGCTTATGTCATGTGTCAGATTTCAGTGTTATATTTCCTTTCATTCCATTTATGTTTTACTTATTTCCTTGTTTTTCCTTTAAAACTACTAGGGCCCGAGATAGGATTTTGTTTTAATTTATTCCCATACGCTCTATTTATGAATTTATTAATAATTTGCAGTTTTGTTTTATTTTCTATTTAATTTAAATAAACTTTATTTCTTTTCTTTTAAAGTAAAGTCCTCTACTTAGTGTGAGAGATTGGGTCTTTACATAAACACTCAGGATGTACTTTTGAGAACTAATGTGTGACGATACAACATTATGAACATAAGAGATGGATCGGCTATTCAAGGATGCTTGAGGCTAGGATTGCAAGTCGTTATTGATCAAGGGGGAGTAATCCTATTAATGTTATGATTATTGTTTTTGTGCAAGATAGTTCTAATTGTTGAGTCAGCCCATGGTTAGTACGTTGGTTCATGTTTAGAGTGTTGTACCCTGGTTTATAACATTGTAATGATCAATTACTACACGAGCAATATAATCTCTTATCATGGTTCTAAGATAGATGTGTCATCGAACTGAGTTAACAAAGTTTGTTGTGTTGTCTGTGCTTCCGTAGTTGTTCTTTCTGTTATTAACTTTCG
Coding sequence (CDS)
ATGCTCCATCATCTTCTTCACAAAGGAAAGGAAAAGAGAAACCCTAACTTTGCAACCCGCCATCGCCACTCCGCCGACGTCAGTCCGAACCGATCGGCTACATCAGATGCGTCGTCTTCACCGTTCGAAGTCGCATCGCTCCACTATAGTCGAACCATTCACGATCGCCAGCCGTCACGTGAAGCTTCGTCGTGTCGTACCGCCGAGCAGCAGCCATCGTCGATCGTCAGCCGCACGTCTTCAGCCGTTCACAATCGTCGAGCCATCTTCGTTGAGCCATCCGAGTCGTCGTTGGGTGTCAGCTGCAAGCAACTTGAGCCGATTCGCCCTCAACCCAACCTGTGTGAGTCCGTCCGTGTCAGCTGCCAGCATGGATTCGAGCCGCACGTGGCCCCAGCCGAGCGGCGCCTCCCCTCTGCGAGCCACGCCTGCCTCCCAACCGAGCCGCCAAGCTTTTTGTGA
Protein sequence
MLHHLLHKGKEKRNPNFATRHRHSADVSPNRSATSDASSSPFEVASLHYSRTIHDRQPSREASSCRTAEQQPSSIVSRTSSAVHNRRAIFVEPSESSLGVSCKQLEPIRPQPNLCESVRVSCQHGFEPHVAPAERRLPSASHACLPTEPPSFL
Homology
BLAST of Cmc06g0176171 vs. NCBI nr
Match:
KAA0047749.1 (Ulp1-like peptidase [Cucumis melo var. makuwa] >TYK02383.1 Ulp1-like peptidase [Cucumis melo var. makuwa])
HSP 1 Score: 167.9 bits (424), Expect = 6.7e-38
Identity = 92/129 (71.32%), Postives = 101/129 (78.29%), Query Frame = 0
Query: 25 ADVSPNRSATSDASSSPFEVASLHYSRTIHDRQPSREASSCRTAEQQPSSIVSRTSSAVH 84
A VSPNRSA ASSS FEVA LH + + DRQPS EA SCR EQQPSSIVSRTSSAV
Sbjct: 110 AAVSPNRSAALGASSSLFEVAPLHCRQNVRDRQPSCEAPSCRITEQQPSSIVSRTSSAVR 169
Query: 85 NRRAIFVEPSESSLGVSCKQLEPIRPQPNLCESVRVSCQHGFEPHVAPAERRLPSASHAC 144
+R+AIFVE ESSLGV+ KQ +P+RPQ +LCES R SCQHG +PH APAE RLP AS A
Sbjct: 170 DRQAIFVEAVESSLGVNHKQPKPVRPQLDLCESARASCQHGSKPHTAPAESRLPFASRAY 229
Query: 145 LPTEPPSFL 154
LPTEPPSFL
Sbjct: 230 LPTEPPSFL 238
BLAST of Cmc06g0176171 vs. NCBI nr
Match:
TYK00171.1 (uncharacterized protein E5676_scaffold2510G00680 [Cucumis melo var. makuwa])
HSP 1 Score: 63.9 bits (154), Expect = 1.4e-06
Identity = 49/106 (46.23%), Postives = 63/106 (59.43%), Query Frame = 0
Query: 11 EKRNPNFATRHRHSADV---SPNRSATSDASSSPFEVASLHYSRTIHDRQPSREASSCRT 70
+K+N F TR R A V S RSA S AS PF+VA LH S T+ +R+ SREASSCR
Sbjct: 58 DKKNV-FKTRRRCLAAVVAISSYRSAASGASPPPFKVAPLHRSCTVRERRSSREASSCRF 117
Query: 71 AEQQPSSIVSRTSSAVHNRRAIF-VEPSESSLGVSCKQLEPIRPQP 113
AEQQ SI S TSS VH +R P + V+ + + ++P+P
Sbjct: 118 AEQQRPSIASATSSKVHAQRLSHRPNPESTHSRVASPRAQTLQPRP 162
BLAST of Cmc06g0176171 vs. NCBI nr
Match:
KAA0063104.1 (uncharacterized protein E6C27_scaffold1337G00110 [Cucumis melo var. makuwa])
HSP 1 Score: 60.5 bits (145), Expect = 1.5e-05
Identity = 45/78 (57.69%), Postives = 50/78 (64.10%), Query Frame = 0
Query: 8 KGKEKR-NPNFATRHRHSADV---SPNRSATSDASSSPFEVASLHYSRTIHDRQPSREAS 67
K KEK+ N N TR R A V S RSA S AS PF+VA LH S T+ +R+ SREAS
Sbjct: 64 KEKEKKPNSNLKTRRRCLAAVVAISSYRSAASGASPPPFKVAPLHRSCTVRERRSSREAS 123
Query: 68 SCRTAEQQPSSIVSRTSS 82
SCR AEQQ SI S TSS
Sbjct: 124 SCRFAEQQRPSIASATSS 141
BLAST of Cmc06g0176171 vs. NCBI nr
Match:
KAA0035694.1 (uncharacterized protein E6C27_scaffold285G003960 [Cucumis melo var. makuwa])
HSP 1 Score: 55.5 bits (132), Expect = 4.8e-04
Identity = 53/151 (35.10%), Postives = 57/151 (37.75%), Query Frame = 0
Query: 1 MLHHLLHKGKEKR--NPNFATRHRHSADVSPNRSATSDASSSPFEVASLHYSRTIHDRQP 60
M HHLLHKGKEKR NPN ATR R
Sbjct: 1 MFHHLLHKGKEKRNSNPNLATRRRR----------------------------------- 60
Query: 61 SREASSCRTAEQQPSSIVSR--TSSAVHNRRAIFVEPSESSLGVSCKQLEPIRPQPNLCE 120
CR + I S SSA H + VEP+ESSLGVS KQ EP+RPQP
Sbjct: 61 ------CRRQSEPIGCINSSRCQSSAAHLQPFSIVEPAESSLGVSRKQPEPVRPQPT--- 100
Query: 121 SVRVSCQHGFEPHVAPA-ERRLPSASHACLP 147
H P P R P CLP
Sbjct: 121 -------HVVRPRQMPVWVRAAPPRYEPCLP 100
BLAST of Cmc06g0176171 vs. NCBI nr
Match:
TYK30852.1 (uncharacterized protein E5676_scaffold455G00500 [Cucumis melo var. makuwa])
HSP 1 Score: 55.5 bits (132), Expect = 4.8e-04
Identity = 53/151 (35.10%), Postives = 57/151 (37.75%), Query Frame = 0
Query: 1 MLHHLLHKGKEKR--NPNFATRHRHSADVSPNRSATSDASSSPFEVASLHYSRTIHDRQP 60
M HHLLHKGKEKR NPN ATR R
Sbjct: 1 MFHHLLHKGKEKRNSNPNLATRRRR----------------------------------- 60
Query: 61 SREASSCRTAEQQPSSIVSR--TSSAVHNRRAIFVEPSESSLGVSCKQLEPIRPQPNLCE 120
CR + I S SSA H + VEP+ESSLGVS KQ EP+RPQP
Sbjct: 61 ------CRRQSEPIGCINSSRCQSSAAHLQPFSIVEPAESSLGVSRKQPEPVRPQPT--- 100
Query: 121 SVRVSCQHGFEPHVAPA-ERRLPSASHACLP 147
H P P R P CLP
Sbjct: 121 -------HVVRPRQMPVWVRAAPPRYEPCLP 100
BLAST of Cmc06g0176171 vs. ExPASy TrEMBL
Match:
A0A5A7U2T7 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00860 PE=4 SV=1)
HSP 1 Score: 167.9 bits (424), Expect = 3.2e-38
Identity = 92/129 (71.32%), Postives = 101/129 (78.29%), Query Frame = 0
Query: 25 ADVSPNRSATSDASSSPFEVASLHYSRTIHDRQPSREASSCRTAEQQPSSIVSRTSSAVH 84
A VSPNRSA ASSS FEVA LH + + DRQPS EA SCR EQQPSSIVSRTSSAV
Sbjct: 110 AAVSPNRSAALGASSSLFEVAPLHCRQNVRDRQPSCEAPSCRITEQQPSSIVSRTSSAVR 169
Query: 85 NRRAIFVEPSESSLGVSCKQLEPIRPQPNLCESVRVSCQHGFEPHVAPAERRLPSASHAC 144
+R+AIFVE ESSLGV+ KQ +P+RPQ +LCES R SCQHG +PH APAE RLP AS A
Sbjct: 170 DRQAIFVEAVESSLGVNHKQPKPVRPQLDLCESARASCQHGSKPHTAPAESRLPFASRAY 229
Query: 145 LPTEPPSFL 154
LPTEPPSFL
Sbjct: 230 LPTEPPSFL 238
BLAST of Cmc06g0176171 vs. ExPASy TrEMBL
Match:
A0A5D3BK22 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2510G00680 PE=4 SV=1)
HSP 1 Score: 63.9 bits (154), Expect = 6.6e-07
Identity = 49/106 (46.23%), Postives = 63/106 (59.43%), Query Frame = 0
Query: 11 EKRNPNFATRHRHSADV---SPNRSATSDASSSPFEVASLHYSRTIHDRQPSREASSCRT 70
+K+N F TR R A V S RSA S AS PF+VA LH S T+ +R+ SREASSCR
Sbjct: 58 DKKNV-FKTRRRCLAAVVAISSYRSAASGASPPPFKVAPLHRSCTVRERRSSREASSCRF 117
Query: 71 AEQQPSSIVSRTSSAVHNRRAIF-VEPSESSLGVSCKQLEPIRPQP 113
AEQQ SI S TSS VH +R P + V+ + + ++P+P
Sbjct: 118 AEQQRPSIASATSSKVHAQRLSHRPNPESTHSRVASPRAQTLQPRP 162
BLAST of Cmc06g0176171 vs. ExPASy TrEMBL
Match:
A0A5A7V7A4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1337G00110 PE=4 SV=1)
HSP 1 Score: 60.5 bits (145), Expect = 7.3e-06
Identity = 45/78 (57.69%), Postives = 50/78 (64.10%), Query Frame = 0
Query: 8 KGKEKR-NPNFATRHRHSADV---SPNRSATSDASSSPFEVASLHYSRTIHDRQPSREAS 67
K KEK+ N N TR R A V S RSA S AS PF+VA LH S T+ +R+ SREAS
Sbjct: 64 KEKEKKPNSNLKTRRRCLAAVVAISSYRSAASGASPPPFKVAPLHRSCTVRERRSSREAS 123
Query: 68 SCRTAEQQPSSIVSRTSS 82
SCR AEQQ SI S TSS
Sbjct: 124 SCRFAEQQRPSIASATSS 141
BLAST of Cmc06g0176171 vs. ExPASy TrEMBL
Match:
A0A5D3E4K8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G00500 PE=4 SV=1)
HSP 1 Score: 55.5 bits (132), Expect = 2.3e-04
Identity = 53/151 (35.10%), Postives = 57/151 (37.75%), Query Frame = 0
Query: 1 MLHHLLHKGKEKR--NPNFATRHRHSADVSPNRSATSDASSSPFEVASLHYSRTIHDRQP 60
M HHLLHKGKEKR NPN ATR R
Sbjct: 1 MFHHLLHKGKEKRNSNPNLATRRRR----------------------------------- 60
Query: 61 SREASSCRTAEQQPSSIVSR--TSSAVHNRRAIFVEPSESSLGVSCKQLEPIRPQPNLCE 120
CR + I S SSA H + VEP+ESSLGVS KQ EP+RPQP
Sbjct: 61 ------CRRQSEPIGCINSSRCQSSAAHLQPFSIVEPAESSLGVSRKQPEPVRPQPT--- 100
Query: 121 SVRVSCQHGFEPHVAPA-ERRLPSASHACLP 147
H P P R P CLP
Sbjct: 121 -------HVVRPRQMPVWVRAAPPRYEPCLP 100
BLAST of Cmc06g0176171 vs. ExPASy TrEMBL
Match:
A0A5A7SWJ1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold285G003960 PE=4 SV=1)
HSP 1 Score: 55.5 bits (132), Expect = 2.3e-04
Identity = 53/151 (35.10%), Postives = 57/151 (37.75%), Query Frame = 0
Query: 1 MLHHLLHKGKEKR--NPNFATRHRHSADVSPNRSATSDASSSPFEVASLHYSRTIHDRQP 60
M HHLLHKGKEKR NPN ATR R
Sbjct: 1 MFHHLLHKGKEKRNSNPNLATRRRR----------------------------------- 60
Query: 61 SREASSCRTAEQQPSSIVSR--TSSAVHNRRAIFVEPSESSLGVSCKQLEPIRPQPNLCE 120
CR + I S SSA H + VEP+ESSLGVS KQ EP+RPQP
Sbjct: 61 ------CRRQSEPIGCINSSRCQSSAAHLQPFSIVEPAESSLGVSRKQPEPVRPQPT--- 100
Query: 121 SVRVSCQHGFEPHVAPA-ERRLPSASHACLP 147
H P P R P CLP
Sbjct: 121 -------HVVRPRQMPVWVRAAPPRYEPCLP 100
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0047749.1 | 6.7e-38 | 71.32 | Ulp1-like peptidase [Cucumis melo var. makuwa] >TYK02383.1 Ulp1-like peptidase [... | [more] |
TYK00171.1 | 1.4e-06 | 46.23 | uncharacterized protein E5676_scaffold2510G00680 [Cucumis melo var. makuwa] | [more] |
KAA0063104.1 | 1.5e-05 | 57.69 | uncharacterized protein E6C27_scaffold1337G00110 [Cucumis melo var. makuwa] | [more] |
KAA0035694.1 | 4.8e-04 | 35.10 | uncharacterized protein E6C27_scaffold285G003960 [Cucumis melo var. makuwa] | [more] |
TYK30852.1 | 4.8e-04 | 35.10 | uncharacterized protein E5676_scaffold455G00500 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7U2T7 | 3.2e-38 | 71.32 | Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G... | [more] |
A0A5D3BK22 | 6.6e-07 | 46.23 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7V7A4 | 7.3e-06 | 57.69 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5D3E4K8 | 2.3e-04 | 35.10 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7SWJ1 | 2.3e-04 | 35.10 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
Match Name | E-value | Identity | Description | |