Cmc04g0107281 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0107281
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	CMiso1.1chr04: 25796140 .. 25806569 (+)
RNA-Seq Expression	Cmc04g0107281
Synteny	Cmc04g0107281

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATGTAACAAAATTAAACCGAATGTCCTATATACAAATTATAAACGAAACAAAATGTTAATTATAAAATTATACAAAACCAGAAAAAAATGAATAAAAATAAAATACATTATCGAAAGCCTACAAACGGCTATTACAAGAGTACCTCTTCAAATAATTTCGAACTCCTTCGTCGCAACGTCCTACATAAGAGAAGAAGATGATTATTATTTGTAATTAAAACACAATAAAAAACGTATGAAAAAAAAAAAAATATACATACCTTTTTATGACGAAAAATGTTACTCCAAATGAAGATTGAATCGGGAAACCGTAAGAATAAGATTAATTTTAATTTAGTAGCCTCAGAGTTTTGATTCCATTCAAAATAATGAATGGAATTCCATCATAGTTATGGAAAAAAAAAATAAAGGACAGAAAGGTATAGAAAACATATCGCAAAAATCATACACTAAAAAGACATGGAAGAGACAACCTACATGGTAACGGTAATGAATACAAAAGATAAGTTACAAGCACAGAGAGGGTACAAAAGATACATGGTAACAGTAAAGAAGAAGAGGACTTACAAAATATAACTTAGAACCACAGAGATGATACAAAGAGGGAGAAGAATGCAGTGAATCAAAAGAGGAAAGGTGACAATATATAGGGGAAAGATGGGGCAAGTTGAGAGGACTTGGAGGGAGGTAAACAAAAATATAAAGACCAAAATACCAAAGTACAACCAACTATCAATAAAATACAGACCCTATCTCTCTGCTACAACTGACATAAAGCATAGCATAGTCAAAGGCTATATACTGAAACCTATACCAAAACCATACCCTACAAAAACATGGAAGAGAGAACACTGGACAGAAAGGAAGAAGAGACAACACTGGACAGAAAGGAAGAAGAGACAACACTGGACAGAAACCAACACCAATTGAAAGTAAATTAACAATGTAACAATACAGACAAATAAATTTTCTAAATTAAAGTAAATGAAAGTAAATGAACAGAACAATAAAACAGAATAGAAGGATTGTAATAAATTTTGTAAGCAAATGTGAAGTCAAAACCATACAGTAAAAAGACATGGAAGAGACAACACTAAAGCAATAAAGACATGGCAAAAGAATACACAGAATACATATAGAGAACAATACAAGAATTGAAAAAAAAATGTAACAAATTTTTAAATGAAACAATTGTACAGAGAGGTTAGAATAAAACAATTGTAAAAAAATACAACAATTGTAAGAAAATTGGTAAGAATACAGAGAAGACATGTTACAATTCTAACAGATAAGTAACATGGCCGGAGAAATTGAACCAATAACAGACAGCAAATAGGTGCAAGAATACAAAAGACATGGCCGGAACTACATACATTGATTACAAAATAATTCAGTATTACACAAATTCGAACTCATCATGGCCGGAACTACATACATTCATTACAAAATAACACATAGGTAAACAATATAGAACACACAACACATAGGTAAACAATACAGAACACACAACACATAGGTAAACAATACAGAACACACAACACATAGGTAAAGAATACAGAACACACAACACATAGGTAAACAATACAGAACACACAACACATAGGTAAAGAATACAGAACACATAACACATTGGTAAAGAATACAGAACAATTCAGTATTACAAAAATTCGAACTCATCATCGGCTTTAAAAAAAAAGTAGATTGAGAACTCCAATACCTCCCTACCAAGCTCCAATGGCAGAGTGAAGAATCTATCCTATTGCCAATCGAAAGACCGGAGAGCATAATCGAACCACGGCGGCAAGGAGGTTTGAAGGAGCCAAAACCCACGATTCCAAAAAGGAAATCGTGTTCGGAGCCAACGAAATCGTCGGCTTCAACGAACACAGAAGTCCTTTCGGAGTGAGAGAGACGGATGAGAGAGATGTAGAGAGAGATTCGACGTAACGAAATCCGGTTTCATCGCGAAAACGCAAGGGCAGAATGGATTAAAGGATGAAGACGAAACCCTACATTCGTTGAGGGAGAAGACGAAAGGAACGAATGGATTAAAGGATGAAACGAAAAAAACCAAAATCGACCGGACAAAAGAGAACGAACACAAACCCTAGAAAAGTTGAGGGAGAAGACGAAACGAAACATCCTTTCGTTGAGGGAGAAGACGAAACGAAACATGGATTCGTTGAGGGAGATGACAGAAAGAAGAGAAAAAGGAAAAAAATTTCGAGGAAGAAGGGTTGAGGAGAATATTGAAATCGGTTTGAAGGAAGAAATCGAACACAGATTGAGGGGAAGGACGAAACCGGATTCACGAAAACGGGGAACACGCGTATCGCCGTTCGAAGGGGAAGAGGAAATCGTGTTAAGGAAACCCTAAAAATAGGGTTTCCTTAACATTGGGCGCAAACGGGGGTTAGGGTTGGGCTAACTTCTAACCCCACAGCCCAAACCCTAACCCCAAACAGCCCCTAAAAGAGTTATGATAGGAGCCATTACTAATCTCCTTTTCGTTCCGGGAAACTCTGTTTGCACTTATCCGACCGCTCAAACTTAGCATTCTTCCTGGTTAGGCCATCAAAGGTAACTAGTTTTTTTTTTCATCCTTTCTCTTTTAGTACAATTAGAAATAAGGATTTCAAACCATTGCTAATTGAGCCACGATCAGTTTGATATTTCAAAACTAATTAACCCTTGCACAGAGGGCACAAACGAATGAAAAGCTGAGGCAAATTTGTAAATAAAGAATTAGAACCGAAGGAAATGCATACACAGGATAGCACACTTAGGTCAACTATTTTACATTACAGAATTGTGGAGAAGGTTAATAATCCTTCTCAAGCAAGTATTTATAACACAACACCTCTTTCATTTGATAACATCAATTTATATATATTCTACGCCTAATAGTAATGGGATATGCAATAAGCTCTTTGGCCTTTGAAATGATCACTCTTTCACCTGATTCTCTCTCTGAACCAGATTGGCAATCGAAATCGGCCTTGCTCCATGAAGAATGTTCCCTTAACTCGATTTCCTAGTTTTTGTTTACAACATAAGTTACAAGTTCCCGTGTATGGTAGAAACATCCCTTGAACCTGGCAGTGACGTGGGATGTTCCCTAACACGGGATAAGAGAAGAGACACTTGTTCATTTGCGAAATCGAGCCTCTCCTGGGATTTTGCAGATTCAATAACAAGATTTGTCACCATGCTTTGCAACAACTGAATCCTTTCAGCATGATCGTTTGTAGTGCTTGGAAGAAGCTTCGCTGAGGGCATGCTTATCCTTCTCCATCGTATGGGAAGATAGCTATCAGGTATTTGGAAACAGTTCCCAGTTGATAGGACCCGAATAGCGTGACGACAAAGAATTCCTGAGAACTCAAACTGGTGGCAGCTACAACTTATGATGCCTTCCCGAGGTACCCAATAAACTTTCCGACCTCCATCAGCTTTTGTATGATGTCTCACAAGAAACCCATCATCCATTTGAAAAGATGAATAATGGGCTGCCAAAACTAGTTGTTCCTGGAGCTTCGAGAAGGCAAAAGGAGTAAGAATGGTGGCAGCATGCGATTCCATTGGGGCGCCTATTTTGAGGCCGATATTTTGAAGATTTTGTTGCATTGTTTGTTGTTCTCCAACTTGGTCTTTGAAATCCACAACAACAGCTACATGATGCACACTTACCCGTGATTTTATTAATAATTATCCTTAACAATAAAACCATTCTTACATGAAATAAACGGAATTTCTTTATGTTTTAGGGAGATCAAGTGGTTAGATGAACGTAATATCAGCAACATGAGCAAAAAAACCAAATGAGAAACAATCCAAATCAAGGTCATATGAAATAAACATGAATCGCACAACACTAAGCAATCAAATCCTTGATTAGGTTTTTTTAATATGAATTACATTTAACTGAAAATCTCTCATTTCATCTATTTTGATGTTTCTACGATTAGCCTCTTTTCAAGGCTGTGCAAAATTTGGCATTAACCTAGGTGATAATTTCTCACGATTCAGTAATCATTCATCTTAACTAAATATCTTCTATGATCTATTCTCTAAGCTTCAAAGCTTGAAAATTCTTTGCTTAGCTGGGCACAGAAAGGAGAAACCAATATCATAATCAAAATAAAAATAAAAATGATAAAGATATAAAAAACACCCAACCAGTTTGGTTGGGGGGGGGGGGGGTGAATTCACTTGTATTGTTTATTGTACCCTTGTCTTGCTCATTTTGTTTCTGTGTGATCCTCACCCTTTGTATTTCTTTCATTCTTTTGAATGTTTGATGTATCACCACCTACCCTAGACTGATTCAGACTTCTAGCATATCAAAAACATGACCGCACATAGTAACTATTAAAATTAGTGGACTTATCCCATTTGGGAGATTTACCCTAAATATTCTTTCCTTTTTTATCTCTTTGTACTTTTCTATTTATTCTTCTCTTGTGCCTATTGTATGATTATCAGAAAATAATAAAACTAAAAACATCGTAGTTTTTCTCCCGATTCTCGGGTTTCCACATAAGCATGACTTCGTGTTTATTGCTTTCAATATGGTATCAGAACGAAGTAACAAACTCTAGAAAAATGTTCAGGAAAAATCCAGACCAAAACAGAAGCTACCGCCGCTGCCGCTGCCGTCGCCCTTCACATCATCATAGAAAAACTACTCCGAAGGAATCAAAAGTCGTCGATCTATCCAATGGGCCAACCCTCGCTGCCGTCGGCGCAACTTTCCGGCCACAAACAACCTCACGCGCCGCCTCTGCCGGACGCGTAGGCCCACAAGCCGTTGTCCGTTAATCTCACCACCCATCCCATTCGATTCTACACGCCGTCGCCTGTCCAACCATCTCACCCTTCCAGCCGTCCGCCGTTGCTGCCCATCACCGTCGGATAGCAACTTGCAAAACTATCAAATCTGTACAGCAATGCAAATCTGTTCGTCGACCCTTTACAGCAACCTTTCTTCTATAGCAACGGGGCTGACCAACTCTATATCAGATTGGGGATTGAAGCGGGCGAGTCATCGGCAACCTCCGGTTATGGACAGTCATATGTTTGTGGTCTTAGGACTAACCAAACCTACAAAAGAGCTATTTTCGAAGTTGGTGCATCCTCGACACAAATGCATTCCAAGAACCCAGTAATTTCGCTTCCTAATGTGCCTTCCAATTATATAACTAACTCTGCTGCTTTTAGTGCTTAATCCTTGACCCATGATAATGAAAAGAATAATGGGAAACCAATTCTCGTTTGTGAGTACGACAAGAAACAATGGCATACCAAGGATCAGTGTTGGAAACTCCACGGTCAGCCCCCCAAAAGGTAACAACGTTCCTTCGATGTTAGAAAGACTGCCAGCACCTCTCAGCCAACTGACCCTACTGCTAGCCAAACTAGCTCTCCTACTTTAAGCGCCATTGCTCAGTCAAGTATGTCTCAGTCTCTTGGCCTTATTAGTGTTGACGGAAAGAATCCCTAGATTTTGGAATCGAGGGCCACAGATCACTTGACAGGTTTTTTGGAGATTTTGTCTCTTATACCCCCGTGCTTGTAATGAGAAAATTCGGATTGCCGATGACTCTTTAGCCTCAATTGCTGGGAAAGAACAAATACTTCTCTTTGACGATTTCTCTCTCCAGAATGTTTTGCATGTGCCTAATCTTTCTTACAATTAACTATCTATCAGTAAGATCACCCCTGAGCTGCACTGTAAAGCTACTTCCTTACTTGAATCTGTTTGCTTTTAGGACTTGAGTTCGAGGAGGATGATTGGCACAACTCGACATAGTAGGGGACTTAACATCCTTGATGATAATACCTCCAGTAGTAGTATCTCTAGGACTAGTTTACTGGCTTCCTATTTTAGCACTTCCAAACATGACTATATGTTGTGGCATTTTCGGTTAGGTCACCCGAACTTTACTTATATGAAATATATGTTTCCCCATCTCTTACCTAAAATAGACGTCTCCTCGTTATCTTGTGATGTGTGCATTCGAGCAAAATAACATATAAACCCACACAACCGTTTATCCTTATCCATAATGACTTTGGGGTCCCTTCAAGGTTACCACCTCATCTGAGAAATAGTAGTTTGTAACTTTCATTGATGATCATAACCGTCTTACCTGGGTCTACCTTATCACCGATAAATCTAAAGTTTCCTTTATTTTCCAAAACTTCTATCACACCATTGAAACGTAATTCCATAAAAAAATTGCTATTCTTTGGAGTAATAATGGTTGGTAATTCCAAAACCATAACCTTAGTGAATTTCTAGCCTCGAAGGATATTGTTCACAAAAACTCATGTGCCTACACTCTTCAACAAAATGTAGTGGCCGAGCGAAAAACCATCACCTTCTGGAAGTAGCTCGTTCCCTTATGCTTTCCACTTCCCTTCCTTCATACCTATGGGGAGATGCTATTCTTGCAACAGCTCATTTAATCAATAGAATATCTTTTCGTATCCTCCACCTTCAAACTCCCTTAGAATGTCTTAAGGAGTCCTACCCTTCTACTCGTCTTGTTTCTAAGGTTCCTCTTCGTGTGTTTGGGTGTACCGCTTATGTCCATAATTTTGACCCTAATCATACCAAATTTACCCATCGGGCTCAGGCTTGTGTGTTTGTTGGGTATCCTCTTCACCAGCGCGATTATAAATGTTTTCACCCACCGTCCAAGAAATACTGTCACTATGGAAGTTACTTTCTGCAAGGACCGACTCTATTTTCCCATTAGCCATCTTCAGGGGGAGAGTGTGAGTGAAGAGTCTAATAGCACCTTTGAATTATCGAACCTATTCCTAGTACCGTGTCGGACATTGATCCTCATCCTATAATCCTACCCACAAACCAAGTTCCTTGGAAAACGTATTGCAGGAGAATCCCAGAAACAATGTCAGGTCCCCTACTAGTCAACCACCAGCTCCAGTCCAAGACTTCGAACCTCCTCGAGATCAAGGTATGGAAAATCCTACTGAACCTTGTACTTAATAATACAATGAGTGAGAATGACAGGTCAGATGTTACTATTCTTGAAAATGTAGAAGAAAAGGACCATGGTGATGAGATTGAAGTCAAAACAGAAACTAATAACAATGAAGCTGATCAGGATCATACAGGGAAAATTAACAAGTATGATCCTTCTCTTAATCTTCCTATTACACTGAGAAAAGGTACTAAGTCCTGTACAAAGCACTCTATATCTAATTATGTGTCATACGAGAATCTTTCACCACAATTCAAAGTCTTTATTGTCAGCCTTAACTCTACCACAATCGAAAAATATTCACATTGCTTTAGAGTGTCTTGAATGGAAGAATGTTGTTATGAAAGAGATGAAAACTTTTGAAAAGAACAACACTTAGGAGATTTGTGCTCCACCCAAAAGACACAAGCCTGTGGGATGTAAATGGGTGTTCACTCTCAAATACAAAGCAAATGGAACACTTGACAGGCACAAGGCAAGGTTAGTTGCAAAAGGGTTTACTCAGACCTATGGTGTTGATCATTCATAAACTTTTTCTCCAGATTATAGAGTCAACAGAATTCACTTTTCCACTCATTGTAACGTTCTCCAAGAATAGCATTAAACCATGATGGAAACTTCGCCACAATCATCCAAATACAAAGTGCATGGTTAGTAGTAGGCAGTTCCATCGCTATTGCATCTTTGAGACACACATTCTGGTCCGTTAATATTGTCTGTAGAGCTTTCATTCATGAATCCCATGAATGCCTTTCATAGCACAGTAGCAAACAAATAAGATAATTGAGAGTGATGAACTATTTAAATAGATGTCATGTCCACCCCTCCCCCATAATGAATGAAGAGGCAAGTTTCAAATTAAAAATGGCAATGACAAGGCTACGAAACTGCATAGTTTCATAAAAGTAGATGAAACCTAAGCTAAGAAAAGAAGCAGATGCACTGCCAGATTCCTCAAAATTTTTAATTATAATAAATTTAAGAAAATGTGATGCAAGATTTAAGACCTAGTACTAAATTGATAAGGATGACTTTTGTATATATCATATTATGATTGAAGTCCCAGTAATGACAGCCTGACAGGCTGTGCATCCGTTTTCTCACCTAACTATTCAAATTCAGATCAAACAATTAAATACTTTCAATTTTCTACTATTAGGTTACCATTGAGAATACTTGTTTTATTTTCTAGACTTGAAGAGAAGGATAAGCAATATTATAAAAACCAGAAAAAGTTACATGCTCAATGTGATACACTAGTTGACGAAGGAATAGTATTGAAACTCTGGTACCTTCAAAGCCCATGTAATCGATCTCAAATTCTCCTCCCGAAGAAGTACACAACTTAGAAAGCAAGGCATGCCATAGTTATTAATTCCAACCCATATCCCAAGTGGCATGTCAAATGCTGTCAATCGATGTGTGGTATCAAAGACCACTGCATCACCAAATGTCTCATATGCCTGAATGGATGATGCATATGACCAGGCAATGTTCTCTAACCTGTTGTTTGAGTCGATCACATACTCAAATTTGAAATTCGGATCTTTCTCTTTAATATTTCTGCACATCCGCAATAAGTCAAAGCTCTCTTCTTCATGATCTAATTTTCTAAATGATTGAAGTAGATTTCTTACATCCTTCTCAGTGAATGGCAAATATCCTGGCTGCACACCTTTCTCCAGCTCCATGAGCCTCATCATTTGCTGCACAGAAATTCCTGATTTGGCATACATAAGAATTCGACCTTGTCAATCTCAGAAATTGTTCGATATGCTGGAAGGAAAAGGACTTGGTTTGGTTCTAATAGTTCATGATTATGGTGGTTTGCAAAACCAGTGACACGCCACTCTGATGGTCCTAGTTCCATTGTTTTGCTTATCCTCATATAAGCTTGACATCCACACCGAGAGGATTTTCAATTTCTCTGAGGCTTATTTTCGTTTGGTGTCTTAATAGGTGTGCTCCCAGCACGATGGCAAAGAAAATAGCGCCTTGTGAGGCCTTTCCCAATCCCATCTTTTCCCTCTGTTCGGTGTCTTCGGATCGAGAAGCCACATCTCTTAGCAAATTCACTATAAAACTCATAAGCAGAGTCATGAGTAGGAAACCTTTGCCCTATATATGGAGTGGCATCATTACTTGAATCCAGGGACAGCCTGGTTTCATCAGGTGACTCCTCTGTGCTGCCGGTTTCGTCTAAAGATAAGGACTGTTGGTCAGAGGGATCATCATACACGACCAACAACGGTCCAGTATCTTCAGACATCATATCTCATTTAACTTCTCGAGTTCAAGTTAATACCCTTGCTTGAGCTTTAGAAATCAGTAAACGTGCATGAGTATGGGGCAAAACTTATCAATAAAATGAAAAGTTTAAAAGATCCAGTACTCTTCATTTTTTGTCTTAGGAATGTGAAGCAATGAGGAAGCAATAAAACCATGCCAAATGAGAATTTAAAGATTACAAGTACAAACAATTTTATCCCAAGAAGAACATGTTTCTTGATTCACAAATCATGTTTCTCATCTGTTGTTTCTGTTCACTCTTTTTTTAAAAGGAGAAATCGAACTACCTTTAGTAACTGTTTCTTATCTTTTTGCATTCCTTTTTTATTTTAAAAAACAAGTAGAAAGAGGTTTTGTGACCACTTCTGGTCCCTCGTTCTATGAACTCATACGAAAGTTATCTTTTAAAAGATTAAATACCCAAAATTTGTATGATTATTTACAATTGTGCATTTTATAAGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGATGAAACGATGGAGGAACAAGAAATAAAACTTGATATTGCCGTTTCTAAAATGTATACAAATTTTTAAAACGTGTCTGACAAACGAGATGAGAAATAAGAGCTGTTTGCAACTAAATGCTTTTGTTTCTAAAAACTGAAAAGAAGAAACAAGAATGTGATCACACGGCCCGTGAAATGCCCTCCCAGAGCTCAAATAGAGTGCAGACAGCTGGTAATGAATTCTTAAAAACTTTCCTTGCAACTGTTATGTCATCATATTCAGATAAAAGCCAGAATTGACCAAATGAACTAAAACCTTCGACTGCGGAGATCATAATCAAATTGGCACAAATTTTAAACAAGAAGAAGGCCTACACGTCAAATTTTCATTCCGAAAAAAAAATTAGCAATCTGGATCAGGTGTGTATTCCGTAAAGAATCGAACGGGCAAACAAATTCCTTCGAATTCATTCATGATTACGAATCGGGAGTAGGGAAAACTGGGATAGAGAGAGAGAGATTGTCTTTACCGGGATTTAAAGGTGTATATGGCGGCACGAAGACGTGAAAGTGAAAGGAGCAGAGCCCTAATTTGCCTTAGTTATACTTCCTGCGCACTTTCTTATCCAACGCCTTTTCTCACTATTTCTT

mRNA sequence

TATGTAACAAAATTAAACCGAATGTCCTATATACAAATTATAAACGAAACAAAATGTTAATTATAAAATTATACAAAACCAGAAAAAAATGAATAAAAATAAAATACATTATCGAAAGCCTACAAACGGCTATTACAAGAGTACCTCTTCAAATAATTTCGAACTCCTTCGTCGCAACGTCCTACATAAGAGAAGAAGATGATTATTATTTGTAATTAAAACACAATAAAAAACGTATGAAAAAAAAAAAAATATACATACCTTTTTATGACGAAAAATGTTACTCCAAATGAAGATTGAATCGGGAAACCGTAAGAATAAGATTAATTTTAATTTAGTAGCCTCAGAGTTTTGATTCCATTCAAAATAATGAATGGAATTCCATCATAGTTATGGAAAAAAAAAATAAAGGACAGAAAGGTATAGAAAACATATCGCAAAAATCATACACTAAAAAGACATGGAAGAGACAACCTACATGGTAACGGTAATGAATACAAAAGATAAGTTACAAGCACAGAGAGGGTACAAAAGATACATGGTAACAGTAAAGAAGAAGAGGACTTACAAAATATAACTTAGAACCACAGAGATGATACAAAGAGGGAGAAGAATGCAGTGAATCAAAAGAGGAAAGGTGACAATATATAGGGGAAAGATGGGGCAAGTTGAGAGGACTTGGAGGGAGGTAAACAAAAATATAAAGACCAAAATACCAAAGTACAACCAACTATCAATAAAATACAGACCCTATCTCTCTGCTACAACTGACATAAAGCATAGCATAGTCAAAGGCTATATACTGAAACCTATACCAAAACCATACCCTACAAAAACATGGAAGAGAGAACACTGGACAGAAAGGAAGAAGAGACAACACTGGACAGAAAGGAAGAAGAGACAACACTGGACAGAAACCAACACCAATTGAAAGTAAATTAACAATGTAACAATACAGACAAATAAATTTTCTAAATTAAAGTAAATGAAAGTAAATGAACAGAACAATAAAACAGAATAGAAGGATTGTAATAAATTTTGTAAGCAAATGTGAAGTCAAAACCATACAGTAAAAAGACATGGAAGAGACAACACTAAAGCAATAAAGACATGGCAAAAGAATACACAGAATACATATAGAGAACAATACAAGAATTGAAAAAAAAATGTAACAAATTTTTAAATGAAACAATTGTACAGAGAGGTTAGAATAAAACAATTGTAAAAAAATACAACAATTGTAAGAAAATTGGTAAGAATACAGAGAAGACATGTTACAATTCTAACAGATAAGTAACATGGCCGGAGAAATTGAACCAATAACAGACAGCAAATAGGTGCAAGAATACAAAAGACATGGCCGGAACTACATACATTGATTACAAAATAATTCAGTATTACACAAATTCGAACTCATCATGGCCGGAACTACATACATTCATTACAAAATAACACATAGGTAAACAATATAGAACACACAACACATAGGTAAACAATACAGAACACACAACACATAGGTAAACAATACAGAACACACAACACATAGGTAAAGAATACAGAACACACAACACATAGGTAAACAATACAGAACACACAACACATAGGTAAAGAATACAGAACACATAACACATTGGTAAAGAATACAGAACAATTCAGTATTACAAAAATTCGAACTCATCATCGGCTTTAAAAAAAAAGTAGATTGAGAACTCCAATACCTCCCTACCAAGCTCCAATGGCAGAGTGAAGAATCTATCCTATTGCCAATCGAAAGACCGGAGAGCATAATCGAACCACGGCGGCAAGGAGGTTTGAAGGAGCCAAAACCCACGATTCCAAAAAGGAAATCGTGTTCGGAGCCAACGAAATCGTCGGCTTCAACGAACACAGAAGTCCTTTCGGAGTGAGAGAGACGGATGAGAGAGATGTAGAGAGAGATTCGACGTAACGAAATCCGGTTTCATCGCGAAAACGCAAGGGCAGAATGGATTAAAGGATGAAGACGAAACCCTACATTCGTTGAGGGAGAAGACGAAAGGAACGAATGGATTAAAGGATGAAACGAAAAAAACCAAAATCGACCGGACAAAAGAGAACGAACACAAACCCTAGAAAAGTTGAGGGAGAAGACGAAACGAAACATCCTTTCGTTGAGGGAGAAGACGAAACGAAACATGGATTCGTTGAGGGAGATGACAGAAAGAAGAGAAAAAGGAAAAAAATTTCGAGGAAGAAGGGTTGAGGAGAATATTGAAATCGGTTTGAAGGAAGAAATCGAACACAGATTGAGGGGAAGGACGAAACCGGATTCACGAAAACGGGGAACACGCGTATCGCCGTTCGAAGGGGAAGAGGAAATCGTGTTAAGGAAACCCTAAAAATAGGGTTTCCTTAACATTGGGCGCAAACGGGGGTTAGGGTTGGGCTAACTTCTAACCCCACAGCCCAAACCCTAACCCCAAACAGCCCCTAAAAGAGTTATGATAGGAGCCATTACTAATCTCCTTTTCGTTCCGGGAAACTCTGTTTGCACTTATCCGACCGCTCAAACTTAGCATTCTTCCTGGTTAGGCCATCAAAGGTAACTAGTTTTTTTTTTCATCCTTTCTCTTTTAGTACAATTAGAAATAAGGATTTCAAACCATTGCTAATTGAGCCACGATCAGTTTGATATTTCAAAACTAATTAACCCTTGCACAGAGGGCACAAACGAATGAAAAGCTGAGGCAAATTTGTAAATAAAGAATTAGAACCGAAGGAAATGCATACACAGGATAGCACACTTAGGTCAACTATTTTACATTACAGAATTGTGGAGAAGGTTAATAATCCTTCTCAAGCAAGTATTTATAACACAACACCTCTTTCATTTGATAACATCAATTTATATATATTCTACGCCTAATAGTAATGGGATATGCAATAAGCTCTTTGGCCTTTGAAATGATCACTCTTTCACCTGATTCTCTCTCTGAACCAGATTGGCAATCGAAATCGGCCTTGCTCCATGAAGAATGTTCCCTTAACTCGATTTCCTAGTTTTTGTTTACAACATAAGTTACAAGTTCCCGTGTATGGTAGAAACATCCCTTGAACCTGGCAGTGACGTGGGATGTTCCCTAACACGGGATAAGAGAAGAGACACTTGTTCATTTGCGAAATCGAGCCTCTCCTGGGATTTTGCAGATTCAATAACAAGATTTGTCACCATGCTTTGCAACAACTGAATCCTTTCAGCATGATCGTTTGTAGTGCTTGGAAGAAGCTTCGCTGAGGGCATGCTTATCCTTCTCCATCGTATGGGAAGATAGCTATCAGGTATTTGGAAACAGTTCCCAGTTGATAGGACCCGAATAGCGTGACGACAAAGAATTCCTGAGAACTCAAACTGGTGGCAGCTACAACTTATGATGCCTTCCCGAGGTACCCAATAAACTTTCCGACCTCCATCAGCTTTTGTATGATGTCTCACAAGAAACCCATCATCCATTTGAAAAGATGAATAATGGGCTGCCAAAACTAGTTGTTCCTGGAGCTTCGAGAAGGCAAAAGGAGTAAGAATGGTGGCAGCATGCGATTCCATTGGGGCGCCTATTTTGAGGCCGATATTTTGAAGATTTTGTTGCATTGTTTGTTGTTCTCCAACTTGGTCTTTGAAATCCACAACAACAGCTACATGATGCACACTTACCCGTGATTTTATTAATAATTATCCTTAACAATAAAACCATTCTTACATGAAATAAACGGAATTTCTTTATGTTTTAGGGAGATCAAGTGGTTAGATGAACGTAATATCAGCAACATGAGCAAAAAAACCAAATGAGAAACAATCCAAATCAAGGTCATATGAAATAAACATGAATCGCACAACACTAAGCAATCAAATCCTTGATTAGGTTTTTTTAATATGAATTACATTTAACTGAAAATCTCTCATTTCATCTATTTTGATGTTTCTACGATTAGCCTCTTTTCAAGGCTGTGCAAAATTTGGCATTAACCTAGGTGATAATTTCTCACGATTCAGTAATCATTCATCTTAACTAAATATCTTCTATGATCTATTCTCTAAGCTTCAAAGCTTGAAAATTCTTTGCTTAGCTGGGCACAGAAAGGAGAAACCAATATCATAATCAAAATAAAAATAAAAATGATAAAGATATAAAAAACACCCAACCAGTTTGGTTGGGGGGGGGGGGGGTGAATTCACTTGTATTGTTTATTGTACCCTTGTCTTGCTCATTTTGTTTCTGTGTGATCCTCACCCTTTGTATTTCTTTCATTCTTTTGAATGTTTGATGTATCACCACCTACCCTAGACTGATTCAGACTTCTAGCATATCAAAAACATGACCGCACATAGTAACTATTAAAATTAGTGGACTTATCCCATTTGGGAGATTTACCCTAAATATTCTTTCCTTTTTTATCTCTTTGTACTTTTCTATTTATTCTTCTCTTGTGCCTATTGTATGATTATCAGAAAATAATAAAACTAAAAACATCGTAGTTTTTCTCCCGATTCTCGGGTTTCCACATAAGCATGACTTCGTGTTTATTGCTTTCAATATGGTATCAGAACGAAGTAACAAACTCTAGAAAAATGTTCAGGAAAAATCCAGACCAAAACAGAAGCTACCGCCGCTGCCGCTGCCGTCGCCCTTCACATCATCATAGAAAAACTACTCCGAAGGAATCAAAAGTCGTCGATCTATCCAATGGGCCAACCCTCGCTGCCGTCGGCGCAACTTTCCGGCCACAAACAACCTCACGCGCCGCCTCTGCCGGACGCGTAGGCCCACAAGCCGTTGTCCGTTAATCTCACCACCCATCCCATTCGATTCTACACGCCGTCGCCTGTCCAACCATCTCACCCTTCCAGCCGTCCGCCGTTGCTGCCCATCACCGTCGGATAGCAACTTGCAAAACTATCAAATCTGTACAGCAATGCAAATCTGTTCGTCGACCCTTTACAGCAACCTTTCTTCTATAGCAACGGGGCTGACCAACTCTATATCAGATTGGGGATTGAAGCGGGCGAGTCATCGGCAACCTCCGGTTATGGACAGTCATATGTTTGTGGTCTTAGGACTAACCAAACCTACAAAAGAGCTATTTTCGAAGTTGGTGCATCCTCGACACAAATGCATTCCAAGAACCCAGTAATTTCGCTTCCTAATGTGCCTTCCAATTATATAACTAACTCTGCTGCTTTTAGTGCTTAATCCTTGACCCATGATAATGAAAAGAATAATGGGAAACCAATTCTCGTTTGTGAGTACGACAAGAAACAATGGCATACCAAGGATCAGTGTTGGAAACTCCACGGTCAGCCCCCCAAAAGGTAACAACGTTCCTTCGATGTTAGAAAGACTGCCAGCACCTCTCAGCCAACTGACCCTACTGCTAGCCAAACTAGCTCTCCTACTTTAAGCGCCATTGCTCAGTCAAGTATGTCTCAGTCTCTTGGCCTTATTAGTGTTGACGGAAAGAATCCCTAGATTTTGGAATCGAGGGCCACAGATCACTTGACAGGTTTTTTGGAGATTTTGTCTCTTATACCCCCGTGCTTGTAATGAGAAAATTCGGATTGCCGATGACTCTTTAGCCTCAATTGCTGGGAAAGAACAAATACTTCTCTTTGACGATTTCTCTCTCCAGAATGTTTTGCATGTGCCTAATCTTTCTTACAATTAACTATCTATCAGTAAGATCACCCCTGAGCTGCACTGTAAAGCTACTTCCTTACTTGAATCTGTTTGCTTTTAGGACTTGAGTTCGAGGAGGATGATTGGCACAACTCGACATAGTAGGGGACTTAACATCCTTGATGATAATACCTCCAGTAGTAGTATCTCTAGGACTAGTTTACTGGCTTCCTATTTTAGCACTTCCAAACATGACTATATGTTGTGGCATTTTCGGTTAGGTCACCCGAACTTTACTTATATGAAATATATGTTTCCCCATCTCTTACCTAAAATAGACGTCTCCTCGTTATCTTGTGATGTGTGCATTCGAGCAAAATAACATATAAACCCACACAACCGTTTATCCTTATCCATAATGACTTTGGGGTCCCTTCAAGGTTACCACCTCATCTGAGAAATAGTAGTTTGTAACTTTCATTGATGATCATAACCGTCTTACCTGGGTCTACCTTATCACCGATAAATCTAAAGTTTCCTTTATTTTCCAAAACTTCTATCACACCATTGAAACGTAATTCCATAAAAAAATTGCTATTCTTTGGAGTAATAATGGTTGGTAATTCCAAAACCATAACCTTAGTGAATTTCTAGCCTCGAAGGATATTGTTCACAAAAACTCATGTGCCTACACTCTTCAACAAAATGTAGTGGCCGAGCGAAAAACCATCACCTTCTGGAAGTAGCTCGTTCCCTTATGCTTTCCACTTCCCTTCCTTCATACCTATGGGGAGATGCTATTCTTGCAACAGCTCATTTAATCAATAGAATATCTTTTCGTATCCTCCACCTTCAAACTCCCTTAGAATGTCTTAAGGAGTCCTACCCTTCTACTCGTCTTGTTTCTAAGGTTCCTCTTCGTGTGTTTGGGTGTACCGCTTATGTCCATAATTTTGACCCTAATCATACCAAATTTACCCATCGGGCTCAGGCTTGTGTGTTTGTTGGGTATCCTCTTCACCAGCGCGATTATAAATGTTTTCACCCACCGTCCAAGAAATACTGTCACTATGGAAGTTACTTTCTGCAAGGACCGACTCTATTTTCCCATTAGCCATCTTCAGGGGGAGAGTGTGAGTGAAGAGTCTAATAGCACCTTTGAATTATCGAACCTATTCCTAGTACCGTGTCGGACATTGATCCTCATCCTATAATCCTACCCACAAACCAAGTTCCTTGGAAAACGTATTGCAGGAGAATCCCAGAAACAATGTCAGGTCCCCTACTAGTCAACCACCAGCTCCAGTCCAAGACTTCGAACCTCCTCGAGATCAAGGTATGGAAAATCCTACTGAACCTTGTACTTAATAATACAATGAGTGAGAATGACAGGTCAGATGTTACTATTCTTGAAAATGTAGAAGAAAAGGACCATGGTGATGAGATTGAAGTCAAAACAGAAACTAATAACAATGAAGCTGATCAGGATCATACAGGGAAAATTAACAAGTATGATCCTTCTCTTAATCTTCCTATTACACTGAGAAAAGGTACTAAGTCCTGTACAAAGCACTCTATATCTAATTATGTGTCATACGAGAATCTTTCACCACAATTCAAAGTCTTTATTGTCAGCCTTAACTCTACCACAATCGAAAAATATTCACATTGCTTTAGAGTGTCTTGAATGGAAGAATGTTGTTATGAAAGAGATGAAAACTTTTGAAAAGAACAACACTTAGGAGATTTGTGCTCCACCCAAAAGACACAAGCCTGTGGGATGTAAATGGGTGTTCACTCTCAAATACAAAGCAAATGGAACACTTGACAGGCACAAGGCAAGGTTAGTTGCAAAAGGGTTTACTCAGACCTATGGTGTTGATCATTCATAAACTTTTTCTCCAGATTATAGAGTCAACAGAATTCACTTTTCCACTCATTGTAACGTTCTCCAAGAATAGCATTAAACCATGATGGAAACTTCGCCACAATCATCCAAATACAAAGTGCATGGTTAGTAGTAGGCAGTTCCATCGCTATTGCATCTTTGAGACACACATTCTGGTCCGTTAATATTGTCTGTAGAGCTTTCATTCATGAATCCCATGAATGCCTTTCATAGCACAGTAGCAAACAAATAAGATAATTGAGAGTGATGAACTATTTAAATAGATGTCATGTCCACCCCTCCCCCATAATGAATGAAGAGGCAAGTTTCAAATTAAAAATGGCAATGACAAGGCTACGAAACTGCATAGTTTCATAAAAGTAGATGAAACCTAAGCTAAGAAAAGAAGCAGATGCACTGCCAGATTCCTCAAAATTTTTAATTATAATAAATTTAAGAAAATGTGATGCAAGATTTAAGACCTAGTACTAAATTGATAAGGATGACTTTTGTATATATCATATTATGATTGAAGTCCCAGTAATGACAGCCTGACAGGCTGTGCATCCGTTTTCTCACCTAACTATTCAAATTCAGATCAAACAATTAAATACTTTCAATTTTCTACTATTAGGTTACCATTGAGAATACTTGTTTTATTTTCTAGACTTGAAGAGAAGGATAAGCAATATTATAAAAACCAGAAAAAGTTACATGCTCAATGTGATACACTAGTTGACGAAGGAATAGTATTGAAACTCTGGTACCTTCAAAGCCCATGTAATCGATCTCAAATTCTCCTCCCGAAGAAGTACACAACTTAGAAAGCAAGGCATGCCATAGTTATTAATTCCAACCCATATCCCAAGTGGCATGTCAAATGCTGTCAATCGATGTGTGGTATCAAAGACCACTGCATCACCAAATGTCTCATATGCCTGAATGGATGATGCATATGACCAGTGAATGGCAAATATCCTGGCTGCACACCTTTCTCCAGCTCCATGAGCCTCATCATTTGCTGCACAGAAATTCCTGATTTGGCATACATAAGAATTCGACCTTGTCAATCTCAGAAATTGTTCGATATGCTGGAAGGAAAAGGACTTGGTTTGGTTCTAATAGTTCATGATTATGGTGGTTTGCAAAACCAGTGACACGCCACTCTGATGGTCCTAGTTCCATTGTTTTGCTTATCCTCATATAAGCTTGACATCCACACCGAGAGGATTTTCAATTTCTCTGAGGCTTATTTTCGTTTGGTGTCTTAATAGGTGTGCTCCCAGCACGATGGCAAAGAAAATAGCGCCTTGTGAGGCCTTTCCCAATCCCATCTTTTCCCTCTGTTCGGTGTCTTCGGATCGAGAAGCCACATCTCTTAGCAAATTCACTATAAAACTCATAAGCAGAGTCATGAGTAGGAAACCTTTGCCCTATATATGGAGTGGCATCATTACTTGAATCCAGGGACAGCCTGGTTTCATCAGGTGACTCCTCTGTGCTGCCGGTTTCGTCTAAAGATAAGGACTGTTGGTCAGAGGGATCATCATACACGACCAACAACGGTCCAGTATCTTCAGACATCATATCTCATTTAACTTCTCGAGTTCAAGTTAATACCCTTGCTTGAGCTTTAGAAATCAGTAAACGTGCATGAGTATGGGGCAAAACTTATCAATAAAATGAAAAGTTTAAAAGATCCAGTACTCTTCATTTTTTGTCTTAGGAATGTGAAGCAATGAGGAAGCAATAAAACCATGCCAAATGAGAATTTAAAGATTACAAGTACAAACAATTTTATCCCAAGAAGAACATGTTTCTTGATTCACAAATCATGTTTCTCATCTGTTGTTTCTGTTCACTCTTTTTTTAAAAGGAGAAATCGAACTACCTTTAGTAACTGTTTCTTATCTTTTTGCATTCCTTTTTTATTTTAAAAAACAAGTAGAAAGAGGTTTTGTGACCACTTCTGGTCCCTCGTTCTATGAACTCATACGAAAGTTATCTTTTAAAAGATTAAATACCCAAAATTTGTATGATTATTTACAATTGTGCATTTTATAAGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGATGAAACGATGGAGGAACAAGAAATAAAACTTGATATTGCCGTTTCTAAAATGTATACAAATTTTTAAAACGTGTCTGACAAACGAGATGAGAAATAAGAGCTGTTTGCAACTAAATGCTTTTGTTTCTAAAAACTGAAAAGAAGAAACAAGAATGTGATCACACGGCCCGTGAAATGCCCTCCCAGAGCTCAAATAGAGTGCAGACAGCTGGTAATGAATTCTTAAAAACTTTCCTTGCAACTGTTATGTCATCATATTCAGATAAAAGCCAGAATTGACCAAATGAACTAAAACCTTCGACTGCGGAGATCATAATCAAATTGGCACAAATTTTAAACAAGAAGAAGGCCTACACGTCAAATTTTCATTCCGAAAAAAAAATTAGCAATCTGGATCAGGTGTGTATTCCGTAAAGAATCGAACGGGCAAACAAATTCCTTCGAATTCATTCATGATTACGAATCGGGAGTAGGGAAAACTGGGATAGAGAGAGAGAGATTGTCTTTACCGGGATTTAAAGGTGTATATGGCGGCACGAAGACGTGAAAGTGAAAGGAGCAGAGCCCTAATTTGCCTTAGTTATACTTCCTGCGCACTTTCTTATCCAACGCCTTTTCTCACTATTTCTT

Coding sequence (CDS)

ATGTCAGGTCCCCTACTAGTCAACCACCAGCTCCAGTCCAAGACTTCGAACCTCCTCGAGATCAAGGTATGGAAAATCCTACTGAACCTTGTACTTAATAATACAATGAGTGAGAATGACAGGTCAGATGTTACTATTCTTGAAAATGTAGAAGAAAAGGACCATGGTGATGAGATTGAAGTCAAAACAGAAACTAATAACAATGAAGCTGATCAGGATCATACAGGGAAAATTAACAAGTATGATCCTTCTCTTAATCTTCCTATTACACTGAGAAAAGGTACTAAGTCCTGTACAAAGCACTCTATATCTAATTATGTGTCATACGAGAATCTTTCACCACAATTCAAAGTCTTTATTGTCAGCCTTAACTCTACCACAATCGAAAAATATTCACATTGCTTTAGAGTGTCTTGA

Protein sequence

MSGPLLVNHQLQSKTSNLLEIKVWKILLNLVLNNTMSENDRSDVTILENVEEKDHGDEIEVKTETNNNEADQDHTGKINKYDPSLNLPITLRKGTKSCTKHSISNYVSYENLSPQFKVFIVSLNSTTIEKYSHCFRVS

Homology

[Close]

BLAST of Cmc04g0107281 vs. NCBI nr
Match: KAA0035625.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK30917.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 158.3 bits (399), Expect = 4.8e-35
Identity = 78/101 (77.23%), Postives = 90/101 (89.11%), Query Frame = 0


Query: 33  NNTMSENDRSDVTILENVEEKDHGDEIEVKTETNNNEADQDHTGKINKYDPSLNLPITLR 92
           NNTM+ENDRSDV +LENVEEK+ GDE +V+TETNNNEA+Q HTGK++KYDPSL+LPI LR
Sbjct: 140 NNTMNENDRSDVAVLENVEEKNSGDETKVRTETNNNEAEQGHTGKLDKYDPSLDLPIALR 199

Query: 93  KGTKSCTKHSISNYVSYENLSPQFKVFIVSLNSTTIEKYSH 134
           KGT+SCTKHSISNYVSYENLSPQF+ F  SL+STTI K  H
Sbjct: 200 KGTRSCTKHSISNYVSYENLSPQFRAFTASLDSTTISKNIH 240

[Close]

BLAST of Cmc04g0107281 vs. NCBI nr
Match: TYK05539.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 149.1 bits (375), Expect = 2.9e-32
Identity = 76/101 (75.25%), Postives = 87/101 (86.14%), Query Frame = 0


Query: 33  NNTMSENDRSDVTILENVEEKDHGDEIEVKTETNNNEADQDHTGKINKYDPSLNLPITLR 92
           NNTMSEND+ DV ++ENVEEKD GDE EVKTET+NNEA++ H GKI+KYDPSL+LPI LR
Sbjct: 464 NNTMSENDKFDVYVIENVEEKDSGDETEVKTETSNNEAERGHIGKIDKYDPSLDLPIALR 523

Query: 93  KGTKSCTKHSISNYVSYENLSPQFKVFIVSLNSTTIEKYSH 134
           KGT+S TKHSISNYVSYENLSPQF+ F  SL+STTI K  H
Sbjct: 524 KGTRSGTKHSISNYVSYENLSPQFRTFTASLDSTTIPKNIH 564

[Close]

BLAST of Cmc04g0107281 vs. NCBI nr
Match: TYK13806.1 (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Cucumis melo var. makuwa])

HSP 1 Score: 148.3 bits (373), Expect = 4.9e-32
Identity = 75/101 (74.26%), Postives = 86/101 (85.15%), Query Frame = 0


Query: 33  NNTMSENDRSDVTILENVEEKDHGDEIEVKTETNNNEADQDHTGKINKYDPSLNLPITLR 92
           NNTMS+NDRSDV  L+NVEEKD GDE EV+TETNNN A Q HTGKI+KYDPSL+L IT +
Sbjct: 179 NNTMSKNDRSDVAFLKNVEEKDSGDETEVRTETNNNGAKQSHTGKIDKYDPSLDLLITFK 238

Query: 93  KGTKSCTKHSISNYVSYENLSPQFKVFIVSLNSTTIEKYSH 134
           +GT+SCTKH ISNYVSY+NLSPQF+ FI SL+STTI K  H
Sbjct: 239 RGTRSCTKHPISNYVSYKNLSPQFRAFIASLDSTTIPKNIH 279

[Close]

BLAST of Cmc04g0107281 vs. NCBI nr
Match: KAA0048014.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 147.1 bits (370), Expect = 1.1e-31
Identity = 74/101 (73.27%), Postives = 86/101 (85.15%), Query Frame = 0


Query: 33  NNTMSENDRSDVTILENVEEKDHGDEIEVKTETNNNEADQDHTGKINKYDPSLNLPITLR 92
           NNTMS+NDRSDV  L+NVEEKD GDE EVKTET+NN A Q HTGKI+KYDPSL+LPIT R
Sbjct: 221 NNTMSKNDRSDVVFLKNVEEKDSGDETEVKTETSNNGAKQSHTGKIDKYDPSLDLPITFR 280

Query: 93  KGTKSCTKHSISNYVSYENLSPQFKVFIVSLNSTTIEKYSH 134
           +GT+SCTKH ISNYVSY+NLSPQ + FI +L++TTI K  H
Sbjct: 281 RGTRSCTKHPISNYVSYKNLSPQSRAFIANLDTTTIPKNIH 321

[Close]

BLAST of Cmc04g0107281 vs. NCBI nr
Match: KAA0054163.1 (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Cucumis melo var. makuwa])

HSP 1 Score: 146.4 bits (368), Expect = 1.9e-31
Identity = 73/98 (74.49%), Postives = 86/98 (87.76%), Query Frame = 0


Query: 33  NNTMSENDRSDVTILENVEEKDHGDEIEVKTETNNNEADQDHTGKINKYDPSLNLPITLR 92
           NNTMSENDRSDV +LEN+EEK+H DE EV+ ET+N+EA+Q HT K ++YDPSL+LPI LR
Sbjct: 617 NNTMSENDRSDVAVLENMEEKNHSDETEVRIETSNDEAEQGHTRKHDEYDPSLDLPIALR 676

Query: 93  KGTKSCTKHSISNYVSYENLSPQFKVFIVSLNSTTIEK 131
           KGT+SCTKHSISNYVSYENLSPQF+ F  SL+STTI K
Sbjct: 677 KGTRSCTKHSISNYVSYENLSPQFRAFTASLDSTTIPK 714

[Close]

BLAST of Cmc04g0107281 vs. ExPASy TrEMBL
Match: A0A5A7T2E9 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G001290 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 2.3e-35
Identity = 78/101 (77.23%), Postives = 90/101 (89.11%), Query Frame = 0


Query: 33  NNTMSENDRSDVTILENVEEKDHGDEIEVKTETNNNEADQDHTGKINKYDPSLNLPITLR 92
           NNTM+ENDRSDV +LENVEEK+ GDE +V+TETNNNEA+Q HTGK++KYDPSL+LPI LR
Sbjct: 140 NNTMNENDRSDVAVLENVEEKNSGDETKVRTETNNNEAEQGHTGKLDKYDPSLDLPIALR 199

Query: 93  KGTKSCTKHSISNYVSYENLSPQFKVFIVSLNSTTIEKYSH 134
           KGT+SCTKHSISNYVSYENLSPQF+ F  SL+STTI K  H
Sbjct: 200 KGTRSCTKHSISNYVSYENLSPQFRAFTASLDSTTISKNIH 240

[Close]

BLAST of Cmc04g0107281 vs. ExPASy TrEMBL
Match: A0A5D3C565 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold178G00460 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 1.4e-32
Identity = 76/101 (75.25%), Postives = 87/101 (86.14%), Query Frame = 0


Query: 33  NNTMSENDRSDVTILENVEEKDHGDEIEVKTETNNNEADQDHTGKINKYDPSLNLPITLR 92
           NNTMSEND+ DV ++ENVEEKD GDE EVKTET+NNEA++ H GKI+KYDPSL+LPI LR
Sbjct: 464 NNTMSENDKFDVYVIENVEEKDSGDETEVKTETSNNEAERGHIGKIDKYDPSLDLPIALR 523

Query: 93  KGTKSCTKHSISNYVSYENLSPQFKVFIVSLNSTTIEKYSH 134
           KGT+S TKHSISNYVSYENLSPQF+ F  SL+STTI K  H
Sbjct: 524 KGTRSGTKHSISNYVSYENLSPQFRTFTASLDSTTIPKNIH 564

[Close]

BLAST of Cmc04g0107281 vs. ExPASy TrEMBL
Match: A0A5D3CTT3 (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00680 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 2.4e-32
Identity = 75/101 (74.26%), Postives = 86/101 (85.15%), Query Frame = 0


Query: 33  NNTMSENDRSDVTILENVEEKDHGDEIEVKTETNNNEADQDHTGKINKYDPSLNLPITLR 92
           NNTMS+NDRSDV  L+NVEEKD GDE EV+TETNNN A Q HTGKI+KYDPSL+L IT +
Sbjct: 179 NNTMSKNDRSDVAFLKNVEEKDSGDETEVRTETNNNGAKQSHTGKIDKYDPSLDLLITFK 238

Query: 93  KGTKSCTKHSISNYVSYENLSPQFKVFIVSLNSTTIEKYSH 134
           +GT+SCTKH ISNYVSY+NLSPQF+ FI SL+STTI K  H
Sbjct: 239 RGTRSCTKHPISNYVSYKNLSPQFRAFIASLDSTTIPKNIH 279

[Close]

BLAST of Cmc04g0107281 vs. ExPASy TrEMBL
Match: A0A5A7TYB2 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00820 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 5.3e-32
Identity = 74/101 (73.27%), Postives = 86/101 (85.15%), Query Frame = 0


Query: 33  NNTMSENDRSDVTILENVEEKDHGDEIEVKTETNNNEADQDHTGKINKYDPSLNLPITLR 92
           NNTMS+NDRSDV  L+NVEEKD GDE EVKTET+NN A Q HTGKI+KYDPSL+LPIT R
Sbjct: 221 NNTMSKNDRSDVVFLKNVEEKDSGDETEVKTETSNNGAKQSHTGKIDKYDPSLDLPITFR 280

Query: 93  KGTKSCTKHSISNYVSYENLSPQFKVFIVSLNSTTIEKYSH 134
           +GT+SCTKH ISNYVSY+NLSPQ + FI +L++TTI K  H
Sbjct: 281 RGTRSCTKHPISNYVSYKNLSPQSRAFIANLDTTTIPKNIH 321

[Close]

BLAST of Cmc04g0107281 vs. ExPASy TrEMBL
Match: A0A5A7UDS7 (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G00920 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 9.1e-32
Identity = 73/98 (74.49%), Postives = 86/98 (87.76%), Query Frame = 0


Query: 33  NNTMSENDRSDVTILENVEEKDHGDEIEVKTETNNNEADQDHTGKINKYDPSLNLPITLR 92
           NNTMSENDRSDV +LEN+EEK+H DE EV+ ET+N+EA+Q HT K ++YDPSL+LPI LR
Sbjct: 617 NNTMSENDRSDVAVLENMEEKNHSDETEVRIETSNDEAEQGHTRKHDEYDPSLDLPIALR 676

Query: 93  KGTKSCTKHSISNYVSYENLSPQFKVFIVSLNSTTIEK 131
           KGT+SCTKHSISNYVSYENLSPQF+ F  SL+STTI K
Sbjct: 677 KGTRSCTKHSISNYVSYENLSPQFRAFTASLDSTTIPK 714

The following BLAST results are available for this feature:

BLAST of Cmc04g0107281 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0035625.1	4.8e-35	77.23	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK05539.1	2.9e-32	75.25	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
TYK13806.1	4.9e-32	74.26	Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Cucumis melo var. makuwa]	[more]
KAA0048014.1	1.1e-31	73.27	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0054163.1	1.9e-31	74.49	Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Cucumis melo var. makuwa]	[more]

BLAST of Cmc04g0107281 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc04g0107281 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T2E9	2.3e-35	77.23	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3C565	1.4e-32	75.25	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold178G0...	[more]
A0A5D3CTT3	2.4e-32	74.26	Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 OS=Cucumis melo var. makuwa O...	[more]
A0A5A7TYB2	5.3e-32	73.27	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7UDS7	9.1e-32	74.49	Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 OS=Cucumis melo var. makuwa O...	[more]

BLAST of Cmc04g0107281 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0107281.1	Cmc04g0107281.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0032456	endocytic recycling
biological_process	GO:0016310	phosphorylation
biological_process	GO:0015031	protein transport
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
cellular_component	GO:0005768	endosome
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0051287	NAD binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding