Cmc04g0107161 (gene) Melon (Charmono) v1.1
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Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTGTGTGGCATTGGACAAGTCTAGCGTGCAACTATATGACTAGGGATGCTATCGTGAGACAAGGCATGTGCACGTGAAGTGGCTTGTGACCAAACTTGGAGCGCCCATGGTGGGTGCACAACAAGTGTCACATGAGGTTAGCATGCGACTTAGCACCTTGATGGGGATTGTGCAGCAGCGTTCAACTTGTCTCTGCTCAGCCACGCACCAGGTGTGCCATTGTGCTATTGATAGGCAATTTTTTTGGGTTTTTTGAAATTTTGAGCAAAACTTAAAATTTTTAAGGATCAAGTTGATTAATTAGGAATTTATTTCTATAATTACAAGTCAAGAAGAGTAAGAGCAAGTCCTCAAGTCTGGAGGGATATGACTTAAAACTGTTAGTGACAAAACGAGTTTGAATTATGTTTTAAAACATGAAATTCTAGTTAAGTGATTTGAGCATGCTCTGAGTTATCTGAATATGGTTTCTGAATATGGTTTCTGAATATGGTTTCTGAATATGGTTTCTGAATATGGTTTTACTAAGTTATTTGCAATGTATAAGATTTAATCAAGCTTGAGTTTAAAAGCAAGAGAAAATCATGAATTTAAAACTAAGTTTTCAAGTATTTAAACACGAGTTATGATTTTGCAAAAGTATGTTGTAAGTATAAGTTTATGCAATAAGCAAAGCATGTTTTAAGCAATGTATGTTTTAGTATAAGAGTATAAGTTTAAGAAAGATGTTTGATCAAGTACGAAACTCGACCTGTTTTATAAATAAACATAATTTCAAGTATAAGAGTTTAAGAGGAAGTATTTAAATTAAGTAATAGGCAAGATGGCTAAGGAAGACTAACTTATTGTGTGCAAGTATAAGCTAAGAAGAGAGTCTAAATGAAAGACTAAGCAAGATATGTTATCTGTATGTTTTAAGTAAAGAATAGTAAAGCATGTCATTTGTTTAAAGGTAAGAGATTTCTTAAAGTTTCCAAGTTAAAATCTAAGCAAAAAGTTAAGCAAAGCTTATAGTAGAACAAGTATAAGTCTAAGTAAATAACTTAGCAAAGTTTAAGATCAATAAGCATGATTTTGAAGTAATTTAAGTTTAAAAGTATTTTTCTATCAATATAACTGTTTTACTTGAAAGAAAATGTTAGAAGTGATCATCTTTACAAATGCTTTATGCTTAAATCTATTAAAGATGTGTATGAGTGCAAATAGTGAGGTCTGGCTTCCCCAAATTACAAAATTAACAGTGAGATATGGTTTGCCCAAATCACATGAAAGAGAATGAGGACTACACTAGCAAAATCACGAGAATGATTATGAGAAGTGGGCTTACCGAACTCGCGAGTTAAACTAATAAGTTGTAAAATAGCAAATTCATTTAGACCACCATTGTCTGTATCGATTTATGTCTACCACAATGGGTTAGATGAGTTGCAGAGTAAAGTAGTATAATAGTTGATTTTAAGAATGTTTTATAAAAACTGAGAAATAAAGTTTAAGTTAAGTATAATGTTACAGTTGGTCACTCACTTAGCCTTTCAACTATCGTTTTCATAATATTTTCATTTCCTAGTTAATGATCGTGATCCTAGAGCTAAGCTTATTGCTGCCAGTCGTTTAGTTTGCCGAAGCGGGTTCAAGTTGTTGTTGTCCTTGATGGGCCTATGTACTATGTGTTTACATGGAGTAAGAGTTGGACAGCCAGTTTATTTAAAACAGAGTTTTATTAATTACAATATGTTTTGATAAGTTTTTCCATTGTGTTATAGCTAAGAAAGTTTTACTATGTTGTTGAACTTGTCTTTTAAGTAAAGCTTTTAAATTTTAGAACCTAACCTTGAGGGTGATATAATATATTTCATCAATGTTGTTATATGTCAAAATGTTTCTGGTTTTTTTTTTTTTGTTCAAATTATTAAATTACTCGAAACACCAATGATGAGTAACTGTTAAGTGATATCATTTTTATATGTATAATGAAATATAAAGCTTTTTTCATTGTTTGTTTCTTTGTACTTTGAGCATCAGAGATCATGAAAGTTTGCATCCGAAGTTGATTGAAGATGGCCTCAAGGGTAACATTTCTTTGCTTTGAGCTGATCTATATGTTGGGATGTGGCTACCATAAGTTGGTTGAACTTCTTGTTTGAGATTGTGGAAAATTCTCCATAAGATTTTCATAATCCTATTCTAACGTAAAGGAAGATTAGAAGAGGTCTATTATATTATTCTGCATTTAGGATTTCTTCCTTGGTATTTATTGCCATTGAATTATTTTTGTTTGTGTAGTTCCCCCAGTTTCTTCTGCCGAATTGAACTTGCTTTGCTTTCTATTTGTAATTTTGTTCTTTTTCAGGTCAAGGCATCGCTTGAGGAAGGTAAAGATATTCGTTTAGGTGATGGGAAACCTGCTAATGTCGAGATTCTCAATACTTTTCAATTGCTCACCGCCCAAGCCTATTGTTTACTTGGTAAGGCCTATCAAGTTAACAAGTATCTTTATTATATATTGGTTCTTTGTTGTTTGTATGTCTTTTACCCGATGGTCATATCGTTTTCAATTCTTTCTATTTGTTATATTGATTAAAATATGAATGTTTTCCCAAATTTCATGTCTTTAGTCACACTCGGGGCATGTAAGTATTGTTTTGAGAGTTAAAGTGTCCCTTAGACGCTTTTTTGAAAACTTTTTAGGTTGGTTTTGGATTTGAAAGTTACACTTAGGCCATGCATCTTGTTTAATTTGAACATTCACATTAAAATGGGACTTAAAAGACGTTGACAGTAAATATCTAGTAGTATGAAACTTTGTTATATTTAGTAAATATTTTGTTATATTTAAAAATGAGGTTAATACGAAAAGAAAAAAAGGATATTGTATTAAAAAGAATATAAGATATGAGTCGTGGATATACCATTTGTGAGGAGATTGAAATTGGGCAGCTGAATCACCACAGCATAAAACAAGCATGTCGGTGTGTATAGAGCCAGGATTTAAGGCAACAATTGCCATACCATCTGGTAGCCCTTTAGCAACACATTTAGTTAGTCCCTCAACTGCCCATTTGGAAGAACAATATGGTGCAAACTGCAAAATTAGTAATACCAAATACTCATAATATAAACTTTGTCATAATTATCAATAATAAATAAATGGATCATATAGTATATTGAATATAATATTGTCGTCTCAGCCTAGCTTACATCTTCATGAGCAGATCTTCCAGCACCAGAAGACATATTGACAATAATTCCATTGTTGTTTTGAATCATAAGGGGAACGAAATGTCTCAAAATATTAGCAATTCCTTTCACGTTTGTATCAATCACATTATCAAATTCTTCTGCTTCAAGTTCCCATATCTTTGCACTTCTATGTGCCAAACCTGCATTATTCACTGTGAA TTGTGTGGCATTGGACAAGTCTAGCGTGCAACTATATGACTAGGGATGCTATCGTGAGACAAGGCATGTGCACGTGAAGTGGCTTGTGACCAAACTTGGAGCGCCCATGGTGGGTGCACAACAAGTGTCACATGAGGTTAGCATGCGACTTAGCACCTTGATGGGGATTGTGCAGCAGCGTTCAACTTGTCTCTGCTCAGCCACGCACCAGAGATCATGAAAGTTTGCATCCGAAGTTGATTGAAGATGGCCTCAAGGGTCAAGGCATCGCTTGAGGAAGGTAAAGATATTCGTTTAGGTGATGGGAAACCTGCTAATGTCGAGATTCTCAATACTTTTCAATTGCTCACCGCCCAAGCCTATTGTTTACTTGATCTTCCAGCACCAGAAGACATATTGACAATAATTCCATTGTTGTTTTGAATCATAAGGGGAACGAAATGTCTCAAAATATTAGCAATTCCTTTCACGTTTGTATCAATCACATTATCAAATTCTTCTGCTTCAAGTTCCCATATCTTTGCACTTCTATGTGCCAAACCTGCATTATTCACTGTGAA ATGGCCTCAAGGGTCAAGGCATCGCTTGAGGAAGGTAAAGATATTCGTTTAGGTGATGGGAAACCTGCTAATGTCGAGATTCTCAATACTTTTCAATTGCTCACCGCCCAAGCCTATTGTTTACTTGATCTTCCAGCACCAGAAGACATATTGACAATAATTCCATTGTTGTTTTGA MASRVKASLEEGKDIRLGDGKPANVEILNTFQLLTAQAYCLLDLPAPEDILTIIPLLF Homology
BLAST of Cmc04g0107161 vs. NCBI nr
Match: XP_038689732.1 (obg-like ATPase 1 [Tripterygium wilfordii] >KAF5729286.1 obg-like ATPase 1-like [Tripterygium wilfordii]) HSP 1 Score: 60.5 bits (145), Expect = 5.7e-06 Identity = 29/37 (78.38%), Postives = 33/37 (89.19%), Query Frame = 0
BLAST of Cmc04g0107161 vs. NCBI nr
Match: XP_038711340.1 (obg-like ATPase 1 [Tripterygium wilfordii]) HSP 1 Score: 60.5 bits (145), Expect = 5.7e-06 Identity = 29/37 (78.38%), Postives = 33/37 (89.19%), Query Frame = 0
BLAST of Cmc04g0107161 vs. NCBI nr
Match: PON54788.1 (Ribosome-binding ATPase YchF/Obg-like ATPase [Parasponia andersonii]) HSP 1 Score: 60.1 bits (144), Expect = 7.4e-06 Identity = 31/47 (65.96%), Postives = 35/47 (74.47%), Query Frame = 0
BLAST of Cmc04g0107161 vs. NCBI nr
Match: POO00993.1 (Ribosome-binding ATPase YchF/Obg-like ATPase [Trema orientale]) HSP 1 Score: 58.9 bits (141), Expect = 1.7e-05 Identity = 30/47 (63.83%), Postives = 35/47 (74.47%), Query Frame = 0
BLAST of Cmc04g0107161 vs. NCBI nr
Match: XP_031249535.1 (obg-like ATPase 1 [Pistacia vera] >XP_031249536.1 obg-like ATPase 1 [Pistacia vera]) HSP 1 Score: 58.5 bits (140), Expect = 2.2e-05 Identity = 26/37 (70.27%), Postives = 33/37 (89.19%), Query Frame = 0
BLAST of Cmc04g0107161 vs. ExPASy Swiss-Prot
Match: B8BBN7 (Obg-like ATPase 1 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_28170 PE=3 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 5.3e-07 Identity = 24/37 (64.86%), Postives = 31/37 (83.78%), Query Frame = 0
BLAST of Cmc04g0107161 vs. ExPASy Swiss-Prot
Match: Q6Z1J6 (Obg-like ATPase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=YCHF1 PE=1 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 5.3e-07 Identity = 24/37 (64.86%), Postives = 31/37 (83.78%), Query Frame = 0
BLAST of Cmc04g0107161 vs. ExPASy Swiss-Prot
Match: Q9SA73 (Obg-like ATPase 1 OS=Arabidopsis thaliana OX=3702 GN=YchF1 PE=1 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 3.5e-06 Identity = 23/37 (62.16%), Postives = 31/37 (83.78%), Query Frame = 0
BLAST of Cmc04g0107161 vs. ExPASy TrEMBL
Match: A0A7J7C689 (Obg-like ATPase 1 OS=Tripterygium wilfordii OX=458696 GN=HS088_TW21G01449 PE=3 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 2.7e-06 Identity = 29/37 (78.38%), Postives = 33/37 (89.19%), Query Frame = 0
BLAST of Cmc04g0107161 vs. ExPASy TrEMBL
Match: A0A2P5C167 (Obg-like ATPase 1 OS=Parasponia andersonii OX=3476 GN=PanWU01x14_192940 PE=3 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 3.6e-06 Identity = 31/47 (65.96%), Postives = 35/47 (74.47%), Query Frame = 0
BLAST of Cmc04g0107161 vs. ExPASy TrEMBL
Match: A0A2P5FT69 (Obg-like ATPase 1 OS=Trema orientale OX=63057 GN=TorRG33x02_031760 PE=3 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 8.0e-06 Identity = 30/47 (63.83%), Postives = 35/47 (74.47%), Query Frame = 0
BLAST of Cmc04g0107161 vs. ExPASy TrEMBL
Match: Q9M7P3 (Obg-like ATPase 1 OS=Capsicum annuum OX=4072 GN=T459_04458 PE=2 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.0e-05 Identity = 27/34 (79.41%), Postives = 32/34 (94.12%), Query Frame = 0
BLAST of Cmc04g0107161 vs. ExPASy TrEMBL
Match: A0A5D3C0N4 (Obg-like ATPase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold178G00400 PE=3 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.0e-05 Identity = 28/34 (82.35%), Postives = 32/34 (94.12%), Query Frame = 0
BLAST of Cmc04g0107161 vs. TAIR 10
Match: AT1G30580.1 (GTP binding ) HSP 1 Score: 51.6 bits (122), Expect = 2.5e-07 Identity = 23/37 (62.16%), Postives = 31/37 (83.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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