MELO3C027498 (gene) Melon (DHL92) v4

Overview


Name	MELO3C027498
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Enzymatic polyprotein
Location	chr11: 8074160 .. 8074956 (-)
RNA-Seq Expression	MELO3C027498
Synteny	MELO3C027498

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATTCGTATCAAGACATACTAAATCGAGTAAAAGGCGAAGCAAAAATACCCATTCAAGTTGAAGATCTTCATCATGAGGTAAAGATCCTCAAAAGAGAAGTTGCTGAAAATAAACAACGACTCATCTACCTTGAAAATGCATTTCAAGCATTTCAAGAATCTCAAGTTTTGAAAGAAAATTCAGAAACTTCAACAAATGATTTTGAAAGAAAAACCGCGGGAAAAACACTATTGATAGAAGAATCGGACAATATCAATAGTATCAGCAAAGTCCATAATCAAAAATGGATGTCAAAAATAGTCTTTAAAGTCAAAGACTTCCAGTTTGAAGCTCTAGCACTTATCGATTCAGGAGCAGATCAAAACATTATACAAGAAGGACTTGTCCCTTCTAAGTATTTCGAAAAAAACTAAGGAATCCTTATCAGGAGCTGGTGGAAATCCTCTCAACATCCAGTTCAAACTATCGAAGGTACACATCTGCAAAGGAGATGTGTGTTTGGTCAATACGTTCATTTTGGTGAAGAACCTTAATGAAGGGATCATCTTAGGAACCCCATTCCTAACCCAGTTATATCCTTTCCATGTTACTAATAAGGGTATAGTTTCAAAGAAATTTGATAAAGAAATTACTTTTGAGTTCACTCATCCAATAACTCCTAAGTATATTTCAAATATTGAAGAAGAAGTTCGTCAATTCATCAACAGGATCGCCAGAAAATAAAAACAGATCGAGTTCCTTCATGACGACATCAAGACCTGCAAAGTGGCTATTGAAATCTAGAAGCCACTAG

mRNA sequence

ATGTATTCGTATCAAGACATACTAAATCGAGTAAAAGGCGAAGCAAAAATACCCATTCAAGTTGAAGATCTTCATCATGAGGTAAAGATCCTCAAAAGAGAAGTTGCTGAAAATAAACAACGACTCATCTACCTTGAAAATGCATTTCAAGCATTTCAAGAATCTCAAGTTTTGAAAGAAAATTCAGAAACTTCAACAAATGATTTTGAAAGAAAAACCGCGGGAAAAACACTATTGATAGAAGAATCGGACAATATCAATAGTATCAGCAAAGTCCATAATCAAAAATGGATGTCAAAAATAGTCTTTAAAGTCAAAGACTTCCAGTTTGAAGCTCTAGCACTTATCGATTCAGGAGCAGATCAAAACATTATACAAGAAGGACTTGTCCCTTCTAAGTATTTCGAAAAAAACTAAGGAATCCTTATCAGGAGCTGGTGGAAATCCTCTCAACATCCAGTTCAAACTATCGAAGAAGAAGTTCGTCAATTCATCAACAGGATCGCCAGAAAATAAAAACAGATCGAGTTCCTTCATGACGACATCAAGACCTGCAAAGTGGCTATTGAAATCTAGAAGCCACTAG

Coding sequence (CDS)

ATGTATTCGTATCAAGACATACTAAATCGAGTAAAAGGCGAAGCAAAAATACCCATTCAAGTTGAAGATCTTCATCATGAGGTAAAGATCCTCAAAAGAGAAGTTGCTGAAAATAAACAACGACTCATCTACCTTGAAAATGCATTTCAAGCATTTCAAGAATCTCAAGTTTTGAAAGAAAATTCAGAAACTTCAACAAATGATTTTGAAAGAAAAACCGCGGGAAAAACACTATTGATAGAAGAATCGGACAATATCAATAGTATCAGCAAAGTCCATAATCAAAAATGGATGTCAAAAATAGTCTTTAAAGTCAAAGACTTCCAGTTTGAAGCTCTAGCACTTATCGATTCAGGAGCAGATCAAAACATTATACAAGAAGGACTTGTCCCTTCTAAGTATTTCGAAAAAAACTAA

Protein sequence

MYSYQDILNRVKGEAKIPIQVEDLHHEVKILKREVAENKQRLIYLENAFQAFQESQVLKENSETSTNDFERKTAGKTLLIEESDNINSISKVHNQKWMSKIVFKVKDFQFEALALIDSGADQNIIQEGLVPSKYFEKN

Homology

[Close]

BLAST of MELO3C027498 vs. NCBI nr
Match: KAA0066381.1 (Enzymatic polyprotein [Cucumis melo var. makuwa] >TYK00903.1 Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 266.5 bits (680), Expect = 1.2e-67
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MYSYQDILNRVKGEAKIPIQVEDLHHEVKILKREVAENKQRLIYLENAFQAFQESQVLKE 60
           MYSYQDILNRVKGEAKIPIQVEDLHHEVKILKREVAENKQRLIYLENAFQAFQESQVLKE
Sbjct: 1   MYSYQDILNRVKGEAKIPIQVEDLHHEVKILKREVAENKQRLIYLENAFQAFQESQVLKE 60

Query: 61  NSETSTNDFERKTAGKTLLIEESDNINSISKVHNQKWMSKIVFKVKDFQFEALALIDSGA 120
           NSETSTNDFERKTAGKTLLIEESDNINSISKVHNQKWMSKIVFKVKDFQFEALALIDSGA
Sbjct: 61  NSETSTNDFERKTAGKTLLIEESDNINSISKVHNQKWMSKIVFKVKDFQFEALALIDSGA 120

Query: 121 DQNIIQEGLVPSKYFEK 138
           DQNIIQEGLVPSKYFEK
Sbjct: 121 DQNIIQEGLVPSKYFEK 137

[Close]

BLAST of MELO3C027498 vs. NCBI nr
Match: KAA0041675.1 (Peptidase_A3 domain-containing protein [Cucumis melo var. makuwa] >TYK06296.1 Peptidase_A3 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 247.7 bits (631), Expect = 6.0e-62
Identity = 126/137 (91.97%), Postives = 130/137 (94.89%), Query Frame = 0


Query: 1   MYSYQDILNRVKGEAKIPIQVEDLHHEVKILKREVAENKQRLIYLENAFQAFQESQVLKE 60
           MY YQDILNRVKGEAKIPIQVEDLHHEVKILKREVAENKQRLIYLENAFQAFQESQVLKE
Sbjct: 99  MYLYQDILNRVKGEAKIPIQVEDLHHEVKILKREVAENKQRLIYLENAFQAFQESQVLKE 158

Query: 61  NSETSTNDFERKTAGKTLLIEESDNINSISKVHNQKWMSKIVFKVKDFQFEALALIDSGA 120
           NSETSTNDFERK AGK LLIE+S  INSISK+HN+KWMSKIVFKVKDFQ E LALIDSGA
Sbjct: 159 NSETSTNDFERKIAGKALLIEDSGKINSISKIHNKKWMSKIVFKVKDFQLETLALIDSGA 218

Query: 121 DQNIIQEGLVPSKYFEK 138
           DQN+IQEGLVPSKYFEK
Sbjct: 219 DQNVIQEGLVPSKYFEK 235

[Close]

BLAST of MELO3C027498 vs. NCBI nr
Match: KAA0057417.1 (Enzymatic polyprotein [Cucumis melo var. makuwa] >TYK30116.1 Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 242.7 bits (618), Expect = 1.9e-60
Identity = 125/137 (91.24%), Postives = 129/137 (94.16%), Query Frame = 0


Query: 1    MYSYQDILNRVKGEAKIPIQVEDLHHEVKILKREVAENKQRLIYLENAFQAFQESQVLKE 60
            MY YQDI NRVKGEAKIPIQVEDLHHEVKILKREV ENKQRLIYLENAFQAFQESQVLKE
Sbjct: 963  MYWYQDIPNRVKGEAKIPIQVEDLHHEVKILKREVTENKQRLIYLENAFQAFQESQVLKE 1022

Query: 61   NSETSTNDFERKTAGKTLLIEESDNINSISKVHNQKWMSKIVFKVKDFQFEALALIDSGA 120
            NSETSTNDF+RK AGK LLIE+S NINSISKVHN+KWMSKIVFKVKDFQ EALALIDSGA
Sbjct: 1023 NSETSTNDFKRKIAGKALLIEDSGNINSISKVHNKKWMSKIVFKVKDFQLEALALIDSGA 1082

Query: 121  DQNIIQEGLVPSKYFEK 138
            DQN+IQE LVPSKYFEK
Sbjct: 1083 DQNVIQEELVPSKYFEK 1099

[Close]

BLAST of MELO3C027498 vs. NCBI nr
Match: TYJ98087.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 240.7 bits (613), Expect = 7.3e-60
Identity = 123/137 (89.78%), Postives = 128/137 (93.43%), Query Frame = 0


Query: 1    MYSYQDILNRVKGEAKIPIQVEDLHHEVKILKREVAENKQRLIYLENAFQAFQESQVLKE 60
            MYSYQDILNRVKGEAK+PIQVEDLHHEVK LKREVAENKQRLIYLENAFQAFQESQVLKE
Sbjct: 1072 MYSYQDILNRVKGEAKMPIQVEDLHHEVKTLKREVAENKQRLIYLENAFQAFQESQVLKE 1131

Query: 61   NSETSTNDFERKTAGKTLLIEESDNINSISKVHNQKWMSKIVFKVKDFQFEALALIDSGA 120
            NSETS NDFERK A K LLI++S  INSISKVHN+KWMSKIVFKVKDFQ E LALIDSGA
Sbjct: 1132 NSETSRNDFERKIARKALLIDDSGKINSISKVHNKKWMSKIVFKVKDFQLETLALIDSGA 1191

Query: 121  DQNIIQEGLVPSKYFEK 138
            DQN+IQEGLVPSKYFEK
Sbjct: 1192 DQNVIQEGLVPSKYFEK 1208

[Close]

BLAST of MELO3C027498 vs. NCBI nr
Match: KAA0052109.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 240.7 bits (613), Expect = 7.3e-60
Identity = 123/137 (89.78%), Postives = 128/137 (93.43%), Query Frame = 0


Query: 1    MYSYQDILNRVKGEAKIPIQVEDLHHEVKILKREVAENKQRLIYLENAFQAFQESQVLKE 60
            MYSYQDILNRVKGEAK+PIQVEDLHHEVK LKREVAENKQRLIYLENAFQAFQESQVLKE
Sbjct: 1072 MYSYQDILNRVKGEAKMPIQVEDLHHEVKTLKREVAENKQRLIYLENAFQAFQESQVLKE 1131

Query: 61   NSETSTNDFERKTAGKTLLIEESDNINSISKVHNQKWMSKIVFKVKDFQFEALALIDSGA 120
            NSETS NDFERK A K LLI++S  INSISKVHN+KWMSKIVFKVKDFQ E LALIDSGA
Sbjct: 1132 NSETSRNDFERKIARKALLIDDSGKINSISKVHNKKWMSKIVFKVKDFQLETLALIDSGA 1191

Query: 121  DQNIIQEGLVPSKYFEK 138
            DQN+IQEGLVPSKYFEK
Sbjct: 1192 DQNVIQEGLVPSKYFEK 1208

[Close]

BLAST of MELO3C027498 vs. ExPASy TrEMBL
Match: A0A5D3BMA6 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G00650 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 6.0e-68
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MYSYQDILNRVKGEAKIPIQVEDLHHEVKILKREVAENKQRLIYLENAFQAFQESQVLKE 60
           MYSYQDILNRVKGEAKIPIQVEDLHHEVKILKREVAENKQRLIYLENAFQAFQESQVLKE
Sbjct: 1   MYSYQDILNRVKGEAKIPIQVEDLHHEVKILKREVAENKQRLIYLENAFQAFQESQVLKE 60

Query: 61  NSETSTNDFERKTAGKTLLIEESDNINSISKVHNQKWMSKIVFKVKDFQFEALALIDSGA 120
           NSETSTNDFERKTAGKTLLIEESDNINSISKVHNQKWMSKIVFKVKDFQFEALALIDSGA
Sbjct: 61  NSETSTNDFERKTAGKTLLIEESDNINSISKVHNQKWMSKIVFKVKDFQFEALALIDSGA 120

Query: 121 DQNIIQEGLVPSKYFEK 138
           DQNIIQEGLVPSKYFEK
Sbjct: 121 DQNIIQEGLVPSKYFEK 137

[Close]

BLAST of MELO3C027498 vs. ExPASy TrEMBL
Match: A0A5A7TJR5 (Peptidase_A3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold594G00060 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 2.9e-62
Identity = 126/137 (91.97%), Postives = 130/137 (94.89%), Query Frame = 0


Query: 1   MYSYQDILNRVKGEAKIPIQVEDLHHEVKILKREVAENKQRLIYLENAFQAFQESQVLKE 60
           MY YQDILNRVKGEAKIPIQVEDLHHEVKILKREVAENKQRLIYLENAFQAFQESQVLKE
Sbjct: 99  MYLYQDILNRVKGEAKIPIQVEDLHHEVKILKREVAENKQRLIYLENAFQAFQESQVLKE 158

Query: 61  NSETSTNDFERKTAGKTLLIEESDNINSISKVHNQKWMSKIVFKVKDFQFEALALIDSGA 120
           NSETSTNDFERK AGK LLIE+S  INSISK+HN+KWMSKIVFKVKDFQ E LALIDSGA
Sbjct: 159 NSETSTNDFERKIAGKALLIEDSGKINSISKIHNKKWMSKIVFKVKDFQLETLALIDSGA 218

Query: 121 DQNIIQEGLVPSKYFEK 138
           DQN+IQEGLVPSKYFEK
Sbjct: 219 DQNVIQEGLVPSKYFEK 235

[Close]

BLAST of MELO3C027498 vs. ExPASy TrEMBL
Match: A0A5A7URX9 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00980 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 9.3e-61
Identity = 125/137 (91.24%), Postives = 129/137 (94.16%), Query Frame = 0


Query: 1    MYSYQDILNRVKGEAKIPIQVEDLHHEVKILKREVAENKQRLIYLENAFQAFQESQVLKE 60
            MY YQDI NRVKGEAKIPIQVEDLHHEVKILKREV ENKQRLIYLENAFQAFQESQVLKE
Sbjct: 963  MYWYQDIPNRVKGEAKIPIQVEDLHHEVKILKREVTENKQRLIYLENAFQAFQESQVLKE 1022

Query: 61   NSETSTNDFERKTAGKTLLIEESDNINSISKVHNQKWMSKIVFKVKDFQFEALALIDSGA 120
            NSETSTNDF+RK AGK LLIE+S NINSISKVHN+KWMSKIVFKVKDFQ EALALIDSGA
Sbjct: 1023 NSETSTNDFKRKIAGKALLIEDSGNINSISKVHNKKWMSKIVFKVKDFQLEALALIDSGA 1082

Query: 121  DQNIIQEGLVPSKYFEK 138
            DQN+IQE LVPSKYFEK
Sbjct: 1083 DQNVIQEELVPSKYFEK 1099

[Close]

BLAST of MELO3C027498 vs. ExPASy TrEMBL
Match: A0A5D3BG41 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold565G00200 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 3.5e-60
Identity = 123/137 (89.78%), Postives = 128/137 (93.43%), Query Frame = 0


Query: 1    MYSYQDILNRVKGEAKIPIQVEDLHHEVKILKREVAENKQRLIYLENAFQAFQESQVLKE 60
            MYSYQDILNRVKGEAK+PIQVEDLHHEVK LKREVAENKQRLIYLENAFQAFQESQVLKE
Sbjct: 1072 MYSYQDILNRVKGEAKMPIQVEDLHHEVKTLKREVAENKQRLIYLENAFQAFQESQVLKE 1131

Query: 61   NSETSTNDFERKTAGKTLLIEESDNINSISKVHNQKWMSKIVFKVKDFQFEALALIDSGA 120
            NSETS NDFERK A K LLI++S  INSISKVHN+KWMSKIVFKVKDFQ E LALIDSGA
Sbjct: 1132 NSETSRNDFERKIARKALLIDDSGKINSISKVHNKKWMSKIVFKVKDFQLETLALIDSGA 1191

Query: 121  DQNIIQEGLVPSKYFEK 138
            DQN+IQEGLVPSKYFEK
Sbjct: 1192 DQNVIQEGLVPSKYFEK 1208

[Close]

BLAST of MELO3C027498 vs. ExPASy TrEMBL
Match: A0A5A7UF59 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold578G00970 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 3.5e-60
Identity = 123/137 (89.78%), Postives = 128/137 (93.43%), Query Frame = 0


Query: 1    MYSYQDILNRVKGEAKIPIQVEDLHHEVKILKREVAENKQRLIYLENAFQAFQESQVLKE 60
            MYSYQDILNRVKGEAK+PIQVEDLHHEVK LKREVAENKQRLIYLENAFQAFQESQVLKE
Sbjct: 1072 MYSYQDILNRVKGEAKMPIQVEDLHHEVKTLKREVAENKQRLIYLENAFQAFQESQVLKE 1131

Query: 61   NSETSTNDFERKTAGKTLLIEESDNINSISKVHNQKWMSKIVFKVKDFQFEALALIDSGA 120
            NSETS NDFERK A K LLI++S  INSISKVHN+KWMSKIVFKVKDFQ E LALIDSGA
Sbjct: 1132 NSETSRNDFERKIARKALLIDDSGKINSISKVHNKKWMSKIVFKVKDFQLETLALIDSGA 1191

Query: 121  DQNIIQEGLVPSKYFEK 138
            DQN+IQEGLVPSKYFEK
Sbjct: 1192 DQNVIQEGLVPSKYFEK 1208

The following BLAST results are available for this feature:

BLAST of MELO3C027498 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0066381.1	1.2e-67	100.00	Enzymatic polyprotein [Cucumis melo var. makuwa] >TYK00903.1 Enzymatic polyprote...	[more]
KAA0041675.1	6.0e-62	91.97	Peptidase_A3 domain-containing protein [Cucumis melo var. makuwa] >TYK06296.1 Pe...	[more]
KAA0057417.1	1.9e-60	91.24	Enzymatic polyprotein [Cucumis melo var. makuwa] >TYK30116.1 Enzymatic polyprote...	[more]
TYJ98087.1	7.3e-60	89.78	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]
KAA0052109.1	7.3e-60	89.78	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C027498 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C027498 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BMA6	6.0e-68	100.00	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold60...	[more]
A0A5A7TJR5	2.9e-62	91.97	Peptidase_A3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5A7URX9	9.3e-61	91.24	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21...	[more]
A0A5D3BG41	3.5e-60	89.78	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold56...	[more]
A0A5A7UF59	3.5e-60	89.78	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57...	[more]

BLAST of MELO3C027498 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 21..41
IPR001995	Peptidase A2A, retrovirus, catalytic	PROSITE	PS50175	ASP_PROT_RETROV	coord: 112..138 score: 9.340499

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C027498.1	MELO3C027498.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0004190	aspartic-type endopeptidase activity