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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGAGCCGGCTTCTTTCAGAAATACCGCACGCCCCCAATACGAACACTACGCTACGTCGTTTTCAGCCGGTGATGTTGAACGCCGACAACCCACTGACAGAGTACTGCCCGTGGGGGGAATGGGCAGCTGCCCAATCTGCCATTAAAGCCGATCTTGCTTACTTGGATCGCACCATTGTAGAGAAGCATCTGAAAGGGAATTGGATTCTCTACTGTTCTCTGAAACTGTCTGTTTAG mRNA sequence ATGAGCCGGCTTCTTTCAGAAATACCGCACGCCCCCAATACGAACACTACGCTACGTCGTTTTCAGCCGGTGATGTTGAACGCCGACAACCCACTGACAGAGTACTGCCCGTGGGGGGAATGGGCAGCTGCCCAATCTGCCATTAAAGCCGATCTTGCTTACTTGGATCGCACCATTGTAGAGAAGCATCTGAAAGGGAATTGGATTCTCTACTGTTCTCTGAAACTGTCTGTTTAG Coding sequence (CDS) ATGAGCCGGCTTCTTTCAGAAATACCGCACGCCCCCAATACGAACACTACGCTACGTCGTTTTCAGCCGGTGATGTTGAACGCCGACAACCCACTGACAGAGTACTGCCCGTGGGGGGAATGGGCAGCTGCCCAATCTGCCATTAAAGCCGATCTTGCTTACTTGGATCGCACCATTGTAGAGAAGCATCTGAAAGGGAATTGGATTCTCTACTGTTCTCTGAAACTGTCTGTTTAG Protein sequence MSRLLSEIPHAPNTNTTLRRFQPVMLNADNPLTEYCPWGEWAAAQSAIKADLAYLDRTIVEKHLKGNWILYCSLKLSV
Homology
BLAST of MELO3C006240 vs. NCBI nr
Match: KAA0049083.1 (hypothetical protein E6C27_scaffold171G003120 [Cucumis melo var. makuwa] >TYK17480.1 hypothetical protein E5676_scaffold434G003450 [Cucumis melo var. makuwa]) HSP 1 Score: 167.2 bits (422), Expect = 5.8e-38 Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0 Query: 1 MSRLLSEIPHAPNTNTTLRRFQPVMLNADNPLTEYCPWGEWAAAQSAIKADLAYLDRTIV 60 MSRLLSEIPHAPNTNTTLRRFQPVMLNADNPLTEYCPWGEWAAAQSAIKADLAYLDRTIV Sbjct: 1 MSRLLSEIPHAPNTNTTLRRFQPVMLNADNPLTEYCPWGEWAAAQSAIKADLAYLDRTIV 60
Query: 61 EKHLKGNWILYCSLKLSV 79 EKHLKGNWILYCSLKLSV Sbjct: 61 EKHLKGNWILYCSLKLSV 78
BLAST of MELO3C006240 vs. NCBI nr
Match: KAE8650283.1 (hypothetical protein Csa_011158, partial [Cucumis sativus]) HSP 1 Score: 71.2 bits (173), Expect = 4.3e-09 Identity = 37/59 (62.71%), Postives = 39/59 (66.10%), Query Frame = 0 Query: 1 MSRLLSEIPHAPNTNTTLRRFQPVMLNADNPLTEYCPWGEWAAAQSAIKADLAYLDRTI 60 MSRLLSEIPHAPNT F + P P G+WAAAQSAIKADLAYLDRTI Sbjct: 1 MSRLLSEIPHAPNTKHYTTSFSAGDVERRQPTDRVLPVGKWAAAQSAIKADLAYLDRTI 59
BLAST of MELO3C006240 vs. ExPASy TrEMBL
Match: A0A5D3D1J1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003450 PE=4 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 2.8e-38 Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0 Query: 1 MSRLLSEIPHAPNTNTTLRRFQPVMLNADNPLTEYCPWGEWAAAQSAIKADLAYLDRTIV 60 MSRLLSEIPHAPNTNTTLRRFQPVMLNADNPLTEYCPWGEWAAAQSAIKADLAYLDRTIV Sbjct: 1 MSRLLSEIPHAPNTNTTLRRFQPVMLNADNPLTEYCPWGEWAAAQSAIKADLAYLDRTIV 60
Query: 61 EKHLKGNWILYCSLKLSV 79 EKHLKGNWILYCSLKLSV Sbjct: 61 EKHLKGNWILYCSLKLSV 78
BLAST of MELO3C006240 vs. ExPASy TrEMBL
Match: A0A0A0L4H2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G127160 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 2.1e-09 Identity = 37/59 (62.71%), Postives = 39/59 (66.10%), Query Frame = 0 Query: 1 MSRLLSEIPHAPNTNTTLRRFQPVMLNADNPLTEYCPWGEWAAAQSAIKADLAYLDRTI 60 MSRLLSEIPHAPNT F + P P G+WAAAQSAIKADLAYLDRTI Sbjct: 1 MSRLLSEIPHAPNTKHYTTSFSAGDVERRQPTDRVLPVGKWAAAQSAIKADLAYLDRTI 59
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0049083.1 | 5.8e-38 | 100.00 | hypothetical protein E6C27_scaffold171G003120 [Cucumis melo var. makuwa] >TYK174... | [more] |
KAE8650283.1 | 4.3e-09 | 62.71 | hypothetical protein Csa_011158, partial [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3D1J1 | 2.8e-38 | 100.00 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A0A0L4H2 | 2.1e-09 | 62.71 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G127160 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
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