Spg017401 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTCAACCATCTTTTTAGTTAAAAAATTATGAAAATTATAAAAGACTGAACATCAACGTTTAAGACAATGTCAACAAGAGCATAGCTTAACTGATATAAAGTTGAATTTATAACCACGAGGTCTGTGGTTCAAATCCCCCACTCCATATTGTCAAAAAAAAAAAAAACGTTTAAAACGATAATAACTAGGTGGCTTTAATACCGGTATGTAGCCAAATTTTTTCCAATTATGCGGGATCCATCCGAACTTAAGCATTAGCATTCTCTAAAAGGTCGTACACTCTCAAACTTGCATCCACACCTGCGGAAGTAATATTCCAAAAAAGAGGAAAAAAGAAAGAAATGACACATTAATAATTGTTTGACTTTTAATACTGAAAGAAACATGCAACAAGATTTGTTTATTTTAATTGAAAAAAAAAGACCAAACAAAGAGAAATTTGCCCAGAGCGTACAATCACCATTCACGAGGGCCATTCTTTCTGGTTCAGAAATTAAAAGAAACTCTTCAAAGAAACAAAAAAAAAAAAAAAAAAAAGCCAATATGTGTGCGTGACTTGCGCTAATGCTTCAACAACTTCATATAATTCCTCTTCTTCTTCTTCACTCTTTTCACCTTCAAACTCCCTCCAAAAAAAATCTCTGCAAAACCCTGTAAAAGAAACCCCCTCCCCCATTGAAATTCAAGCCCTCAGAGCAAGGAAATCGACAGTTCTTGATGTTCAAGAACAAATGAGAAACTCCCCATGAAAAAATCTTCACTCCAATTCCACTTTCTCGACTTGTAACTCCCTCTAATCTCAAACCCCATTTCTTCTCTCATGATGTCTTCTCATGGGGTTTTATTTTCCCTCATTTTCGTGCTCTTTCTCGCCCACGACGCCATTGAAGCGACCTCAATCCACGTGAGTTTTCAAAATCCCCTTCTCTGCAAAACCCACTTCTCGAAAAATCGAAACCCCATTTGGTTCTCATTTCCCCCAAATCGATTGGTTCGATGTTCTGTTCGTGCGATTCAAAGAGCTGATTGTCCGTTTCTTGTTTCTTAGGTTAATGGGTCCGATCAAGAACCGATGATGGTGCCATTAATGGAGAAGATTGAGACGACGGCGGCGATGGTGATGAACGGTGGTCGGCGGCAACTGAAGAGCTTCCAGGTATGCGCTCTCTGCACTTGCTGCGGCGGCGCCAGAGGAATGTGCCTTCCATCGCCCTGTTGCTATGCCATAAACTGTAACATCCCTAATAGGCCCTTTGGCTTTTGCTCTTTTACTCCCAAGACCTGTAACTGCTTTGGCTGCCATATTTAAGCCTTGATCTTATTCTCTTGATCTCTCTCTCTCTCTGTTTATGACGTTGAGAATTGTTCATTGTTCATTGTTGGATCTCTGAAACTGTGGAATATATGTTCTTAATTGTTCATTGTTCATGGGGCTTGGCTTGATTTGGTTTCTGCAGTAGAGATCACAGTGTAGTGCCATTTCTTCAACTTTTTAGAGGAGAATGTTCCAAGATTTGGCTTGTTGGGCACTGTTGATGGCCTTTTTATGTTAATCTAAGTGCACTTTTTTCTTGATTTTGTTTGTTTCTGAGGTGGGTTTTGTGAGAGGCTGCAAAATCTAGAGGGACTTCTTTTTCTTTACAATCATTGCCTTTTTTGCTACTGTTCTGATTCATTCTATCATCTTTTTTCTTTTTGAAATAGCACACATCATTCCATATAAAAGATGGGAATGTTGGGGATGTGAACATAGTTTCGAGTGAAGAAAATAAGTCGGATAGAACTTCTTCAAGTTGGAATTGGAATCAAAATCTCACTTGGAGATTTGGATTTAAAGCGGACAATATCATATGATTATGAAAGTATCGAGATACACTAACACTTTTGTCTTTGTTTTTGTTTTATTTTGCTTAGCTTTTTCTTGATAACAGAAATGTTGAAGGAGACATTACAGATTTTTGAAAAAACATATATATGTCAAGTCAAGCTCAGTCCAAACTTTTTCATCAAGTGAAGCCAGTGGTTGGTCTGCAACAACAACATGTCAATCATTTGTTGAATTTTGAAGCCCACATTGCAGCTTAGAGAAAGGTGCAAATTTCTGCCTCCCTTTGTTCTCTATTCTCTCACTCTCTCTCTTTCCCCCTTAGAAATCATCCTCCTCTTTCTACATTTTCACCAAGATCTTCATTATTTTTGTTTTGTTGTTGTTGTTAGGTGAAGTTACGAAAAGCACCCCTAAAATATAACTATAATAGCTGTTATCAGTTTATCACTACTACATAATGGCCCATATACTTTAGGCTGGATCTTTTTTAATACTTTTAATTTAAATAATCACCCAG ATGATGTCTTCTCATGGGGTTTTATTTTCCCTCATTTTCGTGCTCTTTCTCGCCCACGACGCCATTGAAGCGACCTCAATCCACGTTAATGGGTCCGATCAAGAACCGATGATGGTGCCATTAATGGAGAAGATTGAGACGACGGCGGCGATGGTGATGAACGGTGGTCGGCGGCAACTGAAGAGCTTCCAGGTATGCGCTCTCTGCACTTGCTGCGGCGGCGCCAGAGGAATGTGCCTTCCATCGCCCTGTTGCTATGCCATAAACTGTAACATCCCTAATAGGCCCTTTGGCTTTTGCTCTTTTACTCCCAAGACCTGTAACTGCTTTGGCTGCCATATTTAA ATGATGTCTTCTCATGGGGTTTTATTTTCCCTCATTTTCGTGCTCTTTCTCGCCCACGACGCCATTGAAGCGACCTCAATCCACGTTAATGGGTCCGATCAAGAACCGATGATGGTGCCATTAATGGAGAAGATTGAGACGACGGCGGCGATGGTGATGAACGGTGGTCGGCGGCAACTGAAGAGCTTCCAGGTATGCGCTCTCTGCACTTGCTGCGGCGGCGCCAGAGGAATGTGCCTTCCATCGCCCTGTTGCTATGCCATAAACTGTAACATCCCTAATAGGCCCTTTGGCTTTTGCTCTTTTACTCCCAAGACCTGTAACTGCTTTGGCTGCCATATTTAA MMSSHGVLFSLIFVLFLAHDAIEATSIHVNGSDQEPMMVPLMEKIETTAAMVMNGGRRQLKSFQVCALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFCSFTPKTCNCFGCHI Homology
BLAST of Spg017401 vs. NCBI nr
Match: XP_023546744.1 (uncharacterized protein LOC111805758 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 217.6 bits (553), Expect = 5.5e-53 Identity = 100/113 (88.50%), Postives = 110/113 (97.35%), Query Frame = 0
BLAST of Spg017401 vs. NCBI nr
Match: KAG6598934.1 (hypothetical protein SDJN03_08712, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 216.9 bits (551), Expect = 9.3e-53 Identity = 100/113 (88.50%), Postives = 109/113 (96.46%), Query Frame = 0
BLAST of Spg017401 vs. NCBI nr
Match: KAG7029889.1 (hypothetical protein SDJN02_08232 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 216.9 bits (551), Expect = 9.3e-53 Identity = 100/113 (88.50%), Postives = 109/113 (96.46%), Query Frame = 0
BLAST of Spg017401 vs. NCBI nr
Match: KGN61259.1 (hypothetical protein Csa_005922 [Cucumis sativus]) HSP 1 Score: 209.1 bits (531), Expect = 1.9e-50 Identity = 96/113 (84.96%), Postives = 103/113 (91.15%), Query Frame = 0
BLAST of Spg017401 vs. NCBI nr
Match: XP_022965498.1 (uncharacterized protein LOC111465383 [Cucurbita maxima]) HSP 1 Score: 209.1 bits (531), Expect = 1.9e-50 Identity = 98/114 (85.96%), Postives = 103/114 (90.35%), Query Frame = 0
BLAST of Spg017401 vs. ExPASy TrEMBL
Match: A0A6J1HP40 (uncharacterized protein LOC111465383 OS=Cucurbita maxima OX=3661 GN=LOC111465383 PE=4 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 9.4e-51 Identity = 98/114 (85.96%), Postives = 103/114 (90.35%), Query Frame = 0
BLAST of Spg017401 vs. ExPASy TrEMBL
Match: A0A0A0LJJ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G074210 PE=4 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 9.4e-51 Identity = 96/113 (84.96%), Postives = 103/113 (91.15%), Query Frame = 0
BLAST of Spg017401 vs. ExPASy TrEMBL
Match: A0A6J1D9H7 (uncharacterized protein LOC111018147 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018147 PE=4 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 2.1e-50 Identity = 101/117 (86.32%), Postives = 108/117 (92.31%), Query Frame = 0
BLAST of Spg017401 vs. ExPASy TrEMBL
Match: A0A6J1FHK2 (uncharacterized protein LOC111444031 OS=Cucurbita moschata OX=3662 GN=LOC111444031 PE=4 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 2.3e-49 Identity = 96/114 (84.21%), Postives = 101/114 (88.60%), Query Frame = 0
BLAST of Spg017401 vs. ExPASy TrEMBL
Match: A0A5D3C6S7 (Ubiquitin carboxyl-terminal hydrolase 15 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold105G00010 PE=4 SV=1) HSP 1 Score: 201.1 bits (510), Expect = 2.6e-48 Identity = 97/114 (85.09%), Postives = 103/114 (90.35%), Query Frame = 0
BLAST of Spg017401 vs. TAIR 10
Match: AT1G65295.1 (unknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01015.1); Has 90 Blast hits to 90 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 142.5 bits (358), Expect = 2.1e-34 Identity = 67/107 (62.62%), Postives = 82/107 (76.64%), Query Frame = 0
BLAST of Spg017401 vs. TAIR 10
Match: AT5G01015.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G65295.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 66.6 bits (161), Expect = 1.5e-11 Identity = 33/112 (29.46%), Postives = 52/112 (46.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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