Moc06g33790.1 (mRNA) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g33790.1
Type	mRNA
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	F-box/kelch-repeat protein SKIP30
Location	chr6: 25631601 .. 25632638 (-)
Sequence length	1038
RNA-Seq Expression	Moc06g33790.1
Synteny	Moc06g33790.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGAATTGATTGACGGTCTCCCAGACGCTGTTGCCCTCAGGTGCCTTGCACGTGTCCCCTTCCATCTATATCAGACGTTGGAGCTTGTTTCTCACTCCTGGAAAGCTGCCATTCGTAGTGCTGAACTGTTTAGAGTTCGACGGGAGATTGGATCATCAGAAAATCTATTATGTGTGTGCGCATTTGAACCTGAGAATCTATGGCAGCTCTATGACCCCCTCAGAGACCTTTGGATAACTCTTCCTGTATTTCCATCAAAGATTAGGCATCTTGCACACTTTGGTGCTGTCTCCACTGCTGGAAAGTTGTTTGTGGTCGGTGGTGGAAGTGATGCTGTTGATCCATTAACTGGTGATCAAGATAGGAACTTCGCAACCAATGAGGTGTGGTCATATGATCCTGTAATACATAAGTGGTCGCAACGAGCACCGATGCTTGTAGCACGTGCCATGTTTGCATGCTGTGTTTTGGGTGGAAAGATTGTTGTTGCAGGTGGTTTCACAAGCTGCAGAAAATCGATTTCTCAGGCAGAAGTGTACGATCCTGATAAAGATGTTTGGATTCCACTGCCTGATTTACACCATACTCACAATTCTGCTTGCACAGGGGCAGTGATTGGAGGGAAGTTGCACGTCTTGCACAAGGGATTGTCGACAGTGCAAATTTTCGACAATGTGCGGCCTGGATGGAGAGTTGAGGATTATGGTTGGCTCCAAGGTCCAATGGTTGTTGTCCAGGACTCACTTTATGTGATGAGTCATGGACTAATATTCAAGCATGACAAAGAAGTGAGGAAAGTGGTTATTTCAGCATCCGAGTTTCGTCAACGAATTGGGTTTGCGATGATCGGTTTGAGAGATGAAATTTATGTGATTGGAGGGGATATCGGTCCCGACCGTTTGAATTGGGACATCAAACCAACGTCTGATGTTGACATATTGACAACAGCAGGTGAGAGGCCTACATGGCGACATGCAGCTCCAATGACAAGATGCCGTGGGGCGATTCGGGGATGTGCTGAGTTGAGAATTTAG

mRNA sequence

ATGTCTGAATTGATTGACGGTCTCCCAGACGCTGTTGCCCTCAGGTGCCTTGCACGTGTCCCCTTCCATCTATATCAGACGTTGGAGCTTGTTTCTCACTCCTGGAAAGCTGCCATTCGTAGTGCTGAACTGTTTAGAGTTCGACGGGAGATTGGATCATCAGAAAATCTATTATGTGTGTGCGCATTTGAACCTGAGAATCTATGGCAGCTCTATGACCCCCTCAGAGACCTTTGGATAACTCTTCCTGTATTTCCATCAAAGATTAGGCATCTTGCACACTTTGGTGCTGTCTCCACTGCTGGAAAGTTGTTTGTGGTCGGTGGTGGAAGTGATGCTGTTGATCCATTAACTGGTGATCAAGATAGGAACTTCGCAACCAATGAGGTGTGGTCATATGATCCTGTAATACATAAGTGGTCGCAACGAGCACCGATGCTTGTAGCACGTGCCATGTTTGCATGCTGTGTTTTGGGTGGAAAGATTGTTGTTGCAGGTGGTTTCACAAGCTGCAGAAAATCGATTTCTCAGGCAGAAGTGTACGATCCTGATAAAGATGTTTGGATTCCACTGCCTGATTTACACCATACTCACAATTCTGCTTGCACAGGGGCAGTGATTGGAGGGAAGTTGCACGTCTTGCACAAGGGATTGTCGACAGTGCAAATTTTCGACAATGTGCGGCCTGGATGGAGAGTTGAGGATTATGGTTGGCTCCAAGGTCCAATGGTTGTTGTCCAGGACTCACTTTATGTGATGAGTCATGGACTAATATTCAAGCATGACAAAGAAGTGAGGAAAGTGGTTATTTCAGCATCCGAGTTTCGTCAACGAATTGGGTTTGCGATGATCGGTTTGAGAGATGAAATTTATGTGATTGGAGGGGATATCGGTCCCGACCGTTTGAATTGGGACATCAAACCAACGTCTGATGTTGACATATTGACAACAGCAGGTGAGAGGCCTACATGGCGACATGCAGCTCCAATGACAAGATGCCGTGGGGCGATTCGGGGATGTGCTGAGTTGAGAATTTAG

Coding sequence (CDS)

ATGTCTGAATTGATTGACGGTCTCCCAGACGCTGTTGCCCTCAGGTGCCTTGCACGTGTCCCCTTCCATCTATATCAGACGTTGGAGCTTGTTTCTCACTCCTGGAAAGCTGCCATTCGTAGTGCTGAACTGTTTAGAGTTCGACGGGAGATTGGATCATCAGAAAATCTATTATGTGTGTGCGCATTTGAACCTGAGAATCTATGGCAGCTCTATGACCCCCTCAGAGACCTTTGGATAACTCTTCCTGTATTTCCATCAAAGATTAGGCATCTTGCACACTTTGGTGCTGTCTCCACTGCTGGAAAGTTGTTTGTGGTCGGTGGTGGAAGTGATGCTGTTGATCCATTAACTGGTGATCAAGATAGGAACTTCGCAACCAATGAGGTGTGGTCATATGATCCTGTAATACATAAGTGGTCGCAACGAGCACCGATGCTTGTAGCACGTGCCATGTTTGCATGCTGTGTTTTGGGTGGAAAGATTGTTGTTGCAGGTGGTTTCACAAGCTGCAGAAAATCGATTTCTCAGGCAGAAGTGTACGATCCTGATAAAGATGTTTGGATTCCACTGCCTGATTTACACCATACTCACAATTCTGCTTGCACAGGGGCAGTGATTGGAGGGAAGTTGCACGTCTTGCACAAGGGATTGTCGACAGTGCAAATTTTCGACAATGTGCGGCCTGGATGGAGAGTTGAGGATTATGGTTGGCTCCAAGGTCCAATGGTTGTTGTCCAGGACTCACTTTATGTGATGAGTCATGGACTAATATTCAAGCATGACAAAGAAGTGAGGAAAGTGGTTATTTCAGCATCCGAGTTTCGTCAACGAATTGGGTTTGCGATGATCGGTTTGAGAGATGAAATTTATGTGATTGGAGGGGATATCGGTCCCGACCGTTTGAATTGGGACATCAAACCAACGTCTGATGTTGACATATTGACAACAGCAGGTGAGAGGCCTACATGGCGACATGCAGCTCCAATGACAAGATGCCGTGGGGCGATTCGGGGATGTGCTGAGTTGAGAATTTAG

Protein sequence

MSELIDGLPDAVALRCLARVPFHLYQTLELVSHSWKAAIRSAELFRVRREIGSSENLLCVCAFEPENLWQLYDPLRDLWITLPVFPSKIRHLAHFGAVSTAGKLFVVGGGSDAVDPLTGDQDRNFATNEVWSYDPVIHKWSQRAPMLVARAMFACCVLGGKIVVAGGFTSCRKSISQAEVYDPDKDVWIPLPDLHHTHNSACTGAVIGGKLHVLHKGLSTVQIFDNVRPGWRVEDYGWLQGPMVVVQDSLYVMSHGLIFKHDKEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPDRLNWDIKPTSDVDILTTAGERPTWRHAAPMTRCRGAIRGCAELRI

Homology

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BLAST of Moc06g33790.1 vs. NCBI nr
Match: XP_022146023.1 (F-box/kelch-repeat protein SKIP30 [Momordica charantia] >XP_022146024.1 F-box/kelch-repeat protein SKIP30 [Momordica charantia] >XP_022146025.1 F-box/kelch-repeat protein SKIP30 [Momordica charantia])

HSP 1 Score: 727.2 bits (1876), Expect = 6.4e-206
Identity = 345/345 (100.00%), Postives = 345/345 (100.00%), Query Frame = 0


Query: 1   MSELIDGLPDAVALRCLARVPFHLYQTLELVSHSWKAAIRSAELFRVRREIGSSENLLCV 60
           MSELIDGLPDAVALRCLARVPFHLYQTLELVSHSWKAAIRSAELFRVRREIGSSENLLCV
Sbjct: 1   MSELIDGLPDAVALRCLARVPFHLYQTLELVSHSWKAAIRSAELFRVRREIGSSENLLCV 60

Query: 61  CAFEPENLWQLYDPLRDLWITLPVFPSKIRHLAHFGAVSTAGKLFVVGGGSDAVDPLTGD 120
           CAFEPENLWQLYDPLRDLWITLPVFPSKIRHLAHFGAVSTAGKLFVVGGGSDAVDPLTGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWITLPVFPSKIRHLAHFGAVSTAGKLFVVGGGSDAVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPVIHKWSQRAPMLVARAMFACCVLGGKIVVAGGFTSCRKSISQAEV 180
           QDRNFATNEVWSYDPVIHKWSQRAPMLVARAMFACCVLGGKIVVAGGFTSCRKSISQAEV
Sbjct: 121 QDRNFATNEVWSYDPVIHKWSQRAPMLVARAMFACCVLGGKIVVAGGFTSCRKSISQAEV 180

Query: 181 YDPDKDVWIPLPDLHHTHNSACTGAVIGGKLHVLHKGLSTVQIFDNVRPGWRVEDYGWLQ 240
           YDPDKDVWIPLPDLHHTHNSACTGAVIGGKLHVLHKGLSTVQIFDNVRPGWRVEDYGWLQ
Sbjct: 181 YDPDKDVWIPLPDLHHTHNSACTGAVIGGKLHVLHKGLSTVQIFDNVRPGWRVEDYGWLQ 240

Query: 241 GPMVVVQDSLYVMSHGLIFKHDKEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300
           GPMVVVQDSLYVMSHGLIFKHDKEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD
Sbjct: 241 GPMVVVQDSLYVMSHGLIFKHDKEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300

Query: 301 RLNWDIKPTSDVDILTTAGERPTWRHAAPMTRCRGAIRGCAELRI 346
           RLNWDIKPTSDVDILTTAGERPTWRHAAPMTRCRGAIRGCAELRI
Sbjct: 301 RLNWDIKPTSDVDILTTAGERPTWRHAAPMTRCRGAIRGCAELRI 345

[Close]

BLAST of Moc06g33790.1 vs. NCBI nr
Match: XP_023511586.1 (F-box/kelch-repeat protein SKIP30 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 660.6 bits (1703), Expect = 7.4e-186
Identity = 312/345 (90.43%), Postives = 325/345 (94.20%), Query Frame = 0


Query: 1   MSELIDGLPDAVALRCLARVPFHLYQTLELVSHSWKAAIRSAELFRVRREIGSSENLLCV 60
           MSELIDGLPDAVALRCLARVPFHLY  LELVS SW AAIRS+ELFRVR+EIGSSE+LLCV
Sbjct: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSKSWLAAIRSSELFRVRQEIGSSEDLLCV 60

Query: 61  CAFEPENLWQLYDPLRDLWITLPVFPSKIRHLAHFGAVSTAGKLFVVGGGSDAVDPLTGD 120
           CAFEPENLWQLYDPLRDLWIT+PV PS+IRHLAHFGAVSTAGKLFV+GGGSD VDPLTGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDDVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPVIHKWSQRAPMLVARAMFACCVLGGKIVVAGGFTSCRKSISQAEV 180
           QDRNFATNEVWSYDP+IH+W QRA MLV RAMFACCVLGG+IVVAGGFTSCRKSISQAE+
Sbjct: 121 QDRNFATNEVWSYDPIIHRWFQRASMLVPRAMFACCVLGGRIVVAGGFTSCRKSISQAEM 180

Query: 181 YDPDKDVWIPLPDLHHTHNSACTGAVIGGKLHVLHKGLSTVQIFDNVRPGWRVEDYGWLQ 240
           YDPDKDVWIPLPDLHHTHNSACTG VIGGKLHVLHKGLSTVQIFD+V+  WRVEDYGWLQ
Sbjct: 181 YDPDKDVWIPLPDLHHTHNSACTGVVIGGKLHVLHKGLSTVQIFDDVQLEWRVEDYGWLQ 240

Query: 241 GPMVVVQDSLYVMSHGLIFKHDKEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300
           GPM VVQ SLYVMSHG IFKHD EVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD
Sbjct: 241 GPMAVVQGSLYVMSHGHIFKHDGEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300

Query: 301 RLNWDIKPTSDVDILTTAGERPTWRHAAPMTRCRGAIRGCAELRI 346
           RLNWDIKPTSDVDILTT GERPTWRHAA MT+C GAIRGCA LRI
Sbjct: 301 RLNWDIKPTSDVDILTTGGERPTWRHAASMTKCCGAIRGCARLRI 345

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BLAST of Moc06g33790.1 vs. NCBI nr
Match: XP_022963882.1 (F-box/kelch-repeat protein SKIP30 [Cucurbita moschata] >XP_022967369.1 F-box/kelch-repeat protein SKIP30 [Cucurbita maxima] >KAG6571462.1 F-box/kelch-repeat protein SKIP30, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011226.1 F-box/kelch-repeat protein SKIP30, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 657.1 bits (1694), Expect = 8.2e-185
Identity = 310/345 (89.86%), Postives = 324/345 (93.91%), Query Frame = 0


Query: 1   MSELIDGLPDAVALRCLARVPFHLYQTLELVSHSWKAAIRSAELFRVRREIGSSENLLCV 60
           MSELIDGLPDAVALRCLARVPFHLY  LELVS SW AAIRS+ELFRVR+EIGSSE+LLCV
Sbjct: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSKSWLAAIRSSELFRVRQEIGSSEDLLCV 60

Query: 61  CAFEPENLWQLYDPLRDLWITLPVFPSKIRHLAHFGAVSTAGKLFVVGGGSDAVDPLTGD 120
           CAFEPENLWQLYDPLRDLWIT+PV PS+IRHLAHFGAVSTAGKLFV+GGGSD VDPLTGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDDVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPVIHKWSQRAPMLVARAMFACCVLGGKIVVAGGFTSCRKSISQAEV 180
           QDRNFATNEVWSYDP+IH+W QRA MLV RAMFACCVLGG+IVVAGGFTSCRKSISQAE+
Sbjct: 121 QDRNFATNEVWSYDPIIHRWFQRASMLVPRAMFACCVLGGRIVVAGGFTSCRKSISQAEM 180

Query: 181 YDPDKDVWIPLPDLHHTHNSACTGAVIGGKLHVLHKGLSTVQIFDNVRPGWRVEDYGWLQ 240
           YDPD+DVWIPLPDLHHTHNSACTG VIGGKLHVLHKGLSTVQI D+V+  WRVEDYGWLQ
Sbjct: 181 YDPDRDVWIPLPDLHHTHNSACTGVVIGGKLHVLHKGLSTVQILDDVQLEWRVEDYGWLQ 240

Query: 241 GPMVVVQDSLYVMSHGLIFKHDKEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300
           GPM VVQ SLYVMSHG IFKHD EVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD
Sbjct: 241 GPMAVVQGSLYVMSHGHIFKHDGEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300

Query: 301 RLNWDIKPTSDVDILTTAGERPTWRHAAPMTRCRGAIRGCAELRI 346
           RLNWDIKPTSDVDILTT GERPTWRHAA MT+C GAIRGCA LRI
Sbjct: 301 RLNWDIKPTSDVDILTTGGERPTWRHAASMTKCCGAIRGCARLRI 345

[Close]

BLAST of Moc06g33790.1 vs. NCBI nr
Match: XP_022931065.1 (F-box/kelch-repeat protein SKIP30-like [Cucurbita moschata] >XP_022931066.1 F-box/kelch-repeat protein SKIP30-like [Cucurbita moschata] >XP_022931067.1 F-box/kelch-repeat protein SKIP30-like [Cucurbita moschata])

HSP 1 Score: 649.0 bits (1673), Expect = 2.2e-182
Identity = 304/345 (88.12%), Postives = 320/345 (92.75%), Query Frame = 0


Query: 1   MSELIDGLPDAVALRCLARVPFHLYQTLELVSHSWKAAIRSAELFRVRREIGSSENLLCV 60
           MSELID LPDAVALRCLARVPFHLY  LELVSHSW+AAI SAEL+RVR+EIGSSE+LLCV
Sbjct: 1   MSELIDRLPDAVALRCLARVPFHLYPKLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV 60

Query: 61  CAFEPENLWQLYDPLRDLWITLPVFPSKIRHLAHFGAVSTAGKLFVVGGGSDAVDPLTGD 120
           CAFEPENLWQLYDPLRDLW+T+PV PSKIRHLA FGAVSTAGKLFV+GGGSD+VDPLTGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPVIHKWSQRAPMLVARAMFACCVLGGKIVVAGGFTSCRKSISQAEV 180
           QDRNFATNEVWSYDPVI +WSQ A MLV RAMFACCVL GKIVVAGGFTSCRKSISQAE+
Sbjct: 121 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM 180

Query: 181 YDPDKDVWIPLPDLHHTHNSACTGAVIGGKLHVLHKGLSTVQIFDNVRPGWRVEDYGWLQ 240
           YDPDKD WIPLPDLHHTH+SACTG VIGGKLHVLHKGLSTVQIF+N RPGWRVEDYGWLQ
Sbjct: 181 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ 240

Query: 241 GPMVVVQDSLYVMSHGLIFKHDKEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300
           GPM VVQ SLYVMSHG IFKHD E +KVVISASEFRQRIGFAM+ LRDEIYVIGGDIGPD
Sbjct: 241 GPMTVVQGSLYVMSHGHIFKHDGEAKKVVISASEFRQRIGFAMMSLRDEIYVIGGDIGPD 300

Query: 301 RLNWDIKPTSDVDILTTAGERPTWRHAAPMTRCRGAIRGCAELRI 346
           RLNWD+KPTSDVDILTT GERPTWR A  MTRC GAIRGCA+LRI
Sbjct: 301 RLNWDVKPTSDVDILTTGGERPTWRQATSMTRCHGAIRGCAQLRI 345

[Close]

BLAST of Moc06g33790.1 vs. NCBI nr
Match: XP_022996118.1 (F-box/kelch-repeat protein SKIP30-like [Cucurbita maxima] >XP_022996119.1 F-box/kelch-repeat protein SKIP30-like [Cucurbita maxima] >XP_022996120.1 F-box/kelch-repeat protein SKIP30-like [Cucurbita maxima] >XP_022996121.1 F-box/kelch-repeat protein SKIP30-like [Cucurbita maxima])

HSP 1 Score: 648.7 bits (1672), Expect = 2.9e-182
Identity = 303/345 (87.83%), Postives = 320/345 (92.75%), Query Frame = 0


Query: 1   MSELIDGLPDAVALRCLARVPFHLYQTLELVSHSWKAAIRSAELFRVRREIGSSENLLCV 60
           MSELID LPDAVALRCLARVPFHLY  LELVSHSW+AAI SAEL+RVR+EIGSSE+LLCV
Sbjct: 1   MSELIDRLPDAVALRCLARVPFHLYPQLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV 60

Query: 61  CAFEPENLWQLYDPLRDLWITLPVFPSKIRHLAHFGAVSTAGKLFVVGGGSDAVDPLTGD 120
           CAFEPENLWQLYDPLRDLW+T+PV PSKIRHLA FGAVSTAGKLFV+GGGSD+VDPLTGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPVIHKWSQRAPMLVARAMFACCVLGGKIVVAGGFTSCRKSISQAEV 180
           QDRNFATNEVWSYDPVI +WSQ A MLV RAMFACCVL GKIVVAGGFTSCRKSISQAE+
Sbjct: 121 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM 180

Query: 181 YDPDKDVWIPLPDLHHTHNSACTGAVIGGKLHVLHKGLSTVQIFDNVRPGWRVEDYGWLQ 240
           YDPDKD WIPLPDLHHTH+SACTG VIGGKLHVLHKGLSTVQIF+N RPGWRVEDYGWLQ
Sbjct: 181 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ 240

Query: 241 GPMVVVQDSLYVMSHGLIFKHDKEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300
           GPM VVQ SLYVMSHG IFKHD E +KV+ISASEFRQRIGFAM+ LRDEIYVIGGDIGPD
Sbjct: 241 GPMTVVQGSLYVMSHGHIFKHDGEAKKVIISASEFRQRIGFAMMSLRDEIYVIGGDIGPD 300

Query: 301 RLNWDIKPTSDVDILTTAGERPTWRHAAPMTRCRGAIRGCAELRI 346
           RLNWD+KPTSDVDILTT GERPTWR A  MTRC GAIRGCA+LRI
Sbjct: 301 RLNWDVKPTSDVDILTTGGERPTWRRATSMTRCHGAIRGCAQLRI 345

[Close]

BLAST of Moc06g33790.1 vs. ExPASy Swiss-Prot
Match: Q9M1W7 (F-box/kelch-repeat protein SKIP30 OS=Arabidopsis thaliana OX=3702 GN=SKIP30 PE=1 SV=2)

HSP 1 Score: 528.1 bits (1359), Expect = 7.5e-149
Identity = 240/345 (69.57%), Postives = 285/345 (82.61%), Query Frame = 0


Query: 1   MSELIDGLPDAVALRCLARVPFHLYQTLELVSHSWKAAIRSAELFRVRREIGSSENLLCV 60
           MS L+DG+P+AVALRCLA VP HL+  LELVS SW+AAIRS ELFRVR+E+ SSE+LLCV
Sbjct: 8   MSGLLDGIPEAVALRCLAHVPLHLHPNLELVSRSWRAAIRSHELFRVRKELRSSEHLLCV 67

Query: 61  CAFEPENLWQLYDPLRDLWITLPVFPSKIRHLAHFGAVSTAGKLFVVGGGSDAVDPLTGD 120
           CAF+PEN+WQ+Y P  D W+TLP+ PS+IRHLAHFGAV+TAG LFV+GGGSDAV P+TGD
Sbjct: 68  CAFDPENIWQVYSPNCDRWLTLPLLPSRIRHLAHFGAVTTAGMLFVLGGGSDAVSPVTGD 127

Query: 121 QDRNFATNEVWSYDPVIHKWSQRAPMLVARAMFACCVLGGKIVVAGGFTSCRKSISQAEV 180
            D  FAT++VWSYD V  +W+ RA MLV RAMFACCVL GKIVVAGGFT+CRKSIS AE+
Sbjct: 128 HDGTFATDQVWSYDFVQRQWTPRASMLVPRAMFACCVLQGKIVVAGGFTTCRKSISGAEM 187

Query: 181 YDPDKDVWIPLPDLHHTHNSACTGAVIGGKLHVLHKGLSTVQIFDNVRPGWRVEDYGWLQ 240
           YDP+ DVW  +PDLH THNSAC+G V+ GK+HVLHKGLSTVQ+ ++V+ GW V+DYGW Q
Sbjct: 188 YDPENDVWTSIPDLHQTHNSACSGLVVNGKVHVLHKGLSTVQVLESVKLGWDVKDYGWPQ 247

Query: 241 GPMVVVQDSLYVMSHGLIFKHDKEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300
           GPMVVV+D LYVMSHGL+FK + +  K+V SASEF++RIG AM  L DE+ ++GG IGPD
Sbjct: 248 GPMVVVEDVLYVMSHGLVFKQEGDTWKMVASASEFKRRIGMAMTSLSDEVLIVGGVIGPD 307

Query: 301 RLNWDIKPTSDVDILTTAGERPTWRHAAPMTRCRGAIRGCAELRI 346
           RLNWDIKP SDVD LT   +RP WR  APMTRCRG I GC +L I
Sbjct: 308 RLNWDIKPLSDVDALTVGNDRPAWRSVAPMTRCRGTILGCTQLTI 352

[Close]

BLAST of Moc06g33790.1 vs. ExPASy Swiss-Prot
Match: Q0WW40 (F-box/kelch-repeat protein At1g16250 OS=Arabidopsis thaliana OX=3702 GN=At1g16250 PE=2 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 5.9e-29
Identity = 109/376 (28.99%), Postives = 159/376 (42.29%), Query Frame = 0


Query: 4   LIDGLPDAVALRCLARVPFHLYQTLELVSHSWKAAIRSAELFRVRREIGSSENLLCVCAF 63
           +I GLPD +ALRC+A++    +  LE VS  W+  +R A+    +   G S + L V   
Sbjct: 8   IIPGLPDDLALRCIAKLSHGYHGVLECVSRGWRDLVRGADYSCYKARNGWSGSWLFVLTE 67

Query: 64  EPENLWQLYDPLRDLWITLPVFPSKIR--HLAHFGAVSTAGKLFVVGGGSDAVDPLTGDQ 123
             +N W  YDP  D W  LP   +     H + F  V  +  L V+ GG  A    +   
Sbjct: 68  RSKNQWVAYDPEADRWHPLPRTRAVQDGWHHSGFACVCVSNCLLVI-GGCYAPSVSSFPH 127

Query: 124 DRNFATNEVWSYDPVIHKWSQRAPMLVARAMFACCVLGGKIVVAGGFT-SCRKSISQAEV 183
            +   T +V  +DP   +W   A M   R  FAC  + GK+ VAGG   +  + I  AEV
Sbjct: 128 QKPVVTKDVMRFDPFKKQWKMVASMRTPRTHFACTSVSGKVYVAGGRNLTHSRGIPSAEV 187

Query: 184 YDPDKDVWIPLPDLHHTHNSACTGAVIGGKLHVLHKGL-----STVQIFDNVRPGWRVED 243
           YDP  D W  LP +       C+G    G  HVL   +     ++ ++F+     W   +
Sbjct: 188 YDPVADRWEELPAMPRPQMD-CSGLSYRGCFHVLSDQVGFAEQNSSEVFNPRDMTWSTVE 247

Query: 244 YGW-----LQ-GPMVVVQDSLYVM---SHGLIFKHDKE---------VRKVVI-SASEFR 303
             W     +Q    V+  D +Y +      LI   D +         V  VV+ +     
Sbjct: 248 DVWPFSRAMQFAVQVMKNDRVYTIVDWGESLIKTRDTDEGEWYNVGSVPSVVLPNHPREL 307

Query: 304 QRIGFAMIGLRDEIYVIGGDIGPDRLNWDIKPTSDVDI-------LTTAGERP-TWRHAA 344
           +  G+    LR+E+YVIGG +    L W+       DI       +    +RP  WR   
Sbjct: 308 EAFGYGFAALRNELYVIGGKV----LKWEESGAGRFDIVRLPVVRVCNPLDRPLNWRETK 367

[Close]

BLAST of Moc06g33790.1 vs. ExPASy Swiss-Prot
Match: Q9CAG8 (F-box/kelch-repeat protein At1g67480 OS=Arabidopsis thaliana OX=3702 GN=At1g67480 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 6.4e-23
Identity = 71/214 (33.18%), Postives = 100/214 (46.73%), Query Frame = 0


Query: 4   LIDGLPDAVALRCLARVPFHLYQTLELVSHSWKAAIRSAELFRVRREIGSSENLLCVCAF 63
           LI GLPD VA +CLA VP   + ++  V   W+  ++S E   VRR  G  E  L V   
Sbjct: 39  LIPGLPDDVAKQCLALVPRARFPSMGSVCKKWRFVVQSKEFITVRRLAGMLEEWLYVLTM 98

Query: 64  E---PENLWQLYDPLRDLWITLPVFPSKIRHLAHFGAVSTAGKLFVVGGGSDAVDPLTGD 123
                +N W++ D L     +LP  P   +    F  V   GKL V+ G       L   
Sbjct: 99  NAGGKDNRWEVMDCLGQKLSSLPPMPGPAK--TGFKVVVVDGKLLVIAGCCMINGSLV-- 158

Query: 124 QDRNFATNEVWSYDPVIHKWSQRAPMLVARAMFACCVLGGKIVVAGGFTSCRKSISQAEV 183
                A+ +V+ YD  ++ WS+ A + VAR  FAC  + G + V GG     +S+S AEV
Sbjct: 159 -----ASADVYQYDTCLNSWSRLADLEVARYDFACAEVNGHVYVVGGHGVDGESLSSAEV 218

Query: 184 YDPDKDVWIPLPDLHHTHNSACTGAVIGGKLHVL 215
           YDP+   W  +  L       C  +   GKL+V+
Sbjct: 219 YDPETCTWTFIESLRRP-RWGCFASAFNGKLYVM 242

[Close]

BLAST of Moc06g33790.1 vs. ExPASy Swiss-Prot
Match: Q9LM55 (F-box/kelch-repeat protein At1g22040 OS=Arabidopsis thaliana OX=3702 GN=At1g22040 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 2.4e-22
Identity = 70/248 (28.23%), Postives = 116/248 (46.77%), Query Frame = 0


Query: 4   LIDGLPDAVALRCLARVPFHLYQTLELVSHSWKAAIRSAELFRVRREIGSSENLLCVC-- 63
           LI  LPD ++++ LAR+P   Y ++ LVS  W++A+ ++E++ +R+E+G +E  L V   
Sbjct: 43  LIPSLPDELSIQILARLPRICYSSVRLVSRRWRSAVSTSEVYSLRKELGRTEEWLYVLTK 102

Query: 64  AFEPENLWQLYDPLRDLWITLPVFP----------------SKIRHLAHFGAV------- 123
             E + LW   DP+   W  LP  P                + I    + GA+       
Sbjct: 103 GHEDKLLWYALDPVSTKWQRLPPMPVVVYEEESRKSLSGLWNMITPSFNVGAIVRSFLGR 162

Query: 124 -STAGKLFVVGGGSDAVDP---LTGDQDRNFATNEVWSYDPVIHKWSQRAPMLVARAMFA 183
             ++ ++   G    AVD    + G   R+   + VW +DP+++ WS+ + ML +RA   
Sbjct: 163 RDSSEQMPFCGCAIGAVDGGLYVIGGLSRSKTVSCVWRFDPILNSWSEVSSMLASRAYSK 222

Query: 184 CCVLGGKIVVAGGFTSCRKSIS---QAEVYDPDKDVWIPLPDLHHTHNSACTGAVIGGKL 220
             VL  K+ V GG    R  +S    AEVYDP  D W  +P +  +       A +   L
Sbjct: 223 TGVLNKKLYVVGGVDRGRGGLSPLQSAEVYDPSTDAWSEVPSMPFSKAQVLPNAFLADLL 282

[Close]

BLAST of Moc06g33790.1 vs. ExPASy Swiss-Prot
Match: Q93W93 (F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana OX=3702 GN=At1g55270 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 3.0e-20
Identity = 64/195 (32.82%), Postives = 94/195 (48.21%), Query Frame = 0


Query: 4   LIDGLPDAVALRCLARVPFHLYQTLELVSHSWKAAIRSAELFRVRREIGSSENLLCVCAF 63
           L+ GLPD +A+ CL RVP   ++ L LV   W         +  R+ +G SE  + V   
Sbjct: 78  LLPGLPDDLAVACLIRVPRAEHRKLRLVCKRWYRLASGNFFYSQRKLLGMSEEWVYVFKR 137

Query: 64  EPEN--LWQLYDPLRDLWITLPVFPSKIRHLAHFG-AVSTAGKLFVVGGGSDAVDPLTGD 123
           + +    W  +DP+  LW  LP  P +      FG AV +   L++ GG     DPL G 
Sbjct: 138 DRDGKISWNTFDPISQLWQPLPPVPREYSEAVGFGCAVLSGCHLYLFGG----KDPLRGS 197

Query: 124 QDRNFATNEVWSYDPVIHKWSQRAPMLVARAMFACCVLGGKIVVAGG-FTSCRKSISQAE 183
             R      V  Y+   +KW +   ML  R  F CCV+   + VAGG     ++++  AE
Sbjct: 198 MRR------VIFYNARTNKWHRAPDMLRKRHFFGCCVINNCLYVAGGECEGIQRTLRSAE 257

Query: 184 VYDPDKDVWIPLPDL 195
           VYDP+K+ W  + D+
Sbjct: 258 VYDPNKNRWSFIADM 262

[Close]

BLAST of Moc06g33790.1 vs. ExPASy TrEMBL
Match: A0A6J1CW43 (F-box/kelch-repeat protein SKIP30 OS=Momordica charantia OX=3673 GN=LOC111015334 PE=4 SV=1)

HSP 1 Score: 727.2 bits (1876), Expect = 3.1e-206
Identity = 345/345 (100.00%), Postives = 345/345 (100.00%), Query Frame = 0


Query: 1   MSELIDGLPDAVALRCLARVPFHLYQTLELVSHSWKAAIRSAELFRVRREIGSSENLLCV 60
           MSELIDGLPDAVALRCLARVPFHLYQTLELVSHSWKAAIRSAELFRVRREIGSSENLLCV
Sbjct: 1   MSELIDGLPDAVALRCLARVPFHLYQTLELVSHSWKAAIRSAELFRVRREIGSSENLLCV 60

Query: 61  CAFEPENLWQLYDPLRDLWITLPVFPSKIRHLAHFGAVSTAGKLFVVGGGSDAVDPLTGD 120
           CAFEPENLWQLYDPLRDLWITLPVFPSKIRHLAHFGAVSTAGKLFVVGGGSDAVDPLTGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWITLPVFPSKIRHLAHFGAVSTAGKLFVVGGGSDAVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPVIHKWSQRAPMLVARAMFACCVLGGKIVVAGGFTSCRKSISQAEV 180
           QDRNFATNEVWSYDPVIHKWSQRAPMLVARAMFACCVLGGKIVVAGGFTSCRKSISQAEV
Sbjct: 121 QDRNFATNEVWSYDPVIHKWSQRAPMLVARAMFACCVLGGKIVVAGGFTSCRKSISQAEV 180

Query: 181 YDPDKDVWIPLPDLHHTHNSACTGAVIGGKLHVLHKGLSTVQIFDNVRPGWRVEDYGWLQ 240
           YDPDKDVWIPLPDLHHTHNSACTGAVIGGKLHVLHKGLSTVQIFDNVRPGWRVEDYGWLQ
Sbjct: 181 YDPDKDVWIPLPDLHHTHNSACTGAVIGGKLHVLHKGLSTVQIFDNVRPGWRVEDYGWLQ 240

Query: 241 GPMVVVQDSLYVMSHGLIFKHDKEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300
           GPMVVVQDSLYVMSHGLIFKHDKEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD
Sbjct: 241 GPMVVVQDSLYVMSHGLIFKHDKEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300

Query: 301 RLNWDIKPTSDVDILTTAGERPTWRHAAPMTRCRGAIRGCAELRI 346
           RLNWDIKPTSDVDILTTAGERPTWRHAAPMTRCRGAIRGCAELRI
Sbjct: 301 RLNWDIKPTSDVDILTTAGERPTWRHAAPMTRCRGAIRGCAELRI 345

[Close]

BLAST of Moc06g33790.1 vs. ExPASy TrEMBL
Match: A0A6J1HWH7 (F-box/kelch-repeat protein SKIP30 OS=Cucurbita maxima OX=3661 GN=LOC111466917 PE=4 SV=1)

HSP 1 Score: 657.1 bits (1694), Expect = 4.0e-185
Identity = 310/345 (89.86%), Postives = 324/345 (93.91%), Query Frame = 0


Query: 1   MSELIDGLPDAVALRCLARVPFHLYQTLELVSHSWKAAIRSAELFRVRREIGSSENLLCV 60
           MSELIDGLPDAVALRCLARVPFHLY  LELVS SW AAIRS+ELFRVR+EIGSSE+LLCV
Sbjct: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSKSWLAAIRSSELFRVRQEIGSSEDLLCV 60

Query: 61  CAFEPENLWQLYDPLRDLWITLPVFPSKIRHLAHFGAVSTAGKLFVVGGGSDAVDPLTGD 120
           CAFEPENLWQLYDPLRDLWIT+PV PS+IRHLAHFGAVSTAGKLFV+GGGSD VDPLTGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDDVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPVIHKWSQRAPMLVARAMFACCVLGGKIVVAGGFTSCRKSISQAEV 180
           QDRNFATNEVWSYDP+IH+W QRA MLV RAMFACCVLGG+IVVAGGFTSCRKSISQAE+
Sbjct: 121 QDRNFATNEVWSYDPIIHRWFQRASMLVPRAMFACCVLGGRIVVAGGFTSCRKSISQAEM 180

Query: 181 YDPDKDVWIPLPDLHHTHNSACTGAVIGGKLHVLHKGLSTVQIFDNVRPGWRVEDYGWLQ 240
           YDPD+DVWIPLPDLHHTHNSACTG VIGGKLHVLHKGLSTVQI D+V+  WRVEDYGWLQ
Sbjct: 181 YDPDRDVWIPLPDLHHTHNSACTGVVIGGKLHVLHKGLSTVQILDDVQLEWRVEDYGWLQ 240

Query: 241 GPMVVVQDSLYVMSHGLIFKHDKEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300
           GPM VVQ SLYVMSHG IFKHD EVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD
Sbjct: 241 GPMAVVQGSLYVMSHGHIFKHDGEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300

Query: 301 RLNWDIKPTSDVDILTTAGERPTWRHAAPMTRCRGAIRGCAELRI 346
           RLNWDIKPTSDVDILTT GERPTWRHAA MT+C GAIRGCA LRI
Sbjct: 301 RLNWDIKPTSDVDILTTGGERPTWRHAASMTKCCGAIRGCARLRI 345

[Close]

BLAST of Moc06g33790.1 vs. ExPASy TrEMBL
Match: A0A6J1HGE3 (F-box/kelch-repeat protein SKIP30 OS=Cucurbita moschata OX=3662 GN=LOC111464058 PE=4 SV=1)

HSP 1 Score: 657.1 bits (1694), Expect = 4.0e-185
Identity = 310/345 (89.86%), Postives = 324/345 (93.91%), Query Frame = 0


Query: 1   MSELIDGLPDAVALRCLARVPFHLYQTLELVSHSWKAAIRSAELFRVRREIGSSENLLCV 60
           MSELIDGLPDAVALRCLARVPFHLY  LELVS SW AAIRS+ELFRVR+EIGSSE+LLCV
Sbjct: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSKSWLAAIRSSELFRVRQEIGSSEDLLCV 60

Query: 61  CAFEPENLWQLYDPLRDLWITLPVFPSKIRHLAHFGAVSTAGKLFVVGGGSDAVDPLTGD 120
           CAFEPENLWQLYDPLRDLWIT+PV PS+IRHLAHFGAVSTAGKLFV+GGGSD VDPLTGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDDVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPVIHKWSQRAPMLVARAMFACCVLGGKIVVAGGFTSCRKSISQAEV 180
           QDRNFATNEVWSYDP+IH+W QRA MLV RAMFACCVLGG+IVVAGGFTSCRKSISQAE+
Sbjct: 121 QDRNFATNEVWSYDPIIHRWFQRASMLVPRAMFACCVLGGRIVVAGGFTSCRKSISQAEM 180

Query: 181 YDPDKDVWIPLPDLHHTHNSACTGAVIGGKLHVLHKGLSTVQIFDNVRPGWRVEDYGWLQ 240
           YDPD+DVWIPLPDLHHTHNSACTG VIGGKLHVLHKGLSTVQI D+V+  WRVEDYGWLQ
Sbjct: 181 YDPDRDVWIPLPDLHHTHNSACTGVVIGGKLHVLHKGLSTVQILDDVQLEWRVEDYGWLQ 240

Query: 241 GPMVVVQDSLYVMSHGLIFKHDKEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300
           GPM VVQ SLYVMSHG IFKHD EVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD
Sbjct: 241 GPMAVVQGSLYVMSHGHIFKHDGEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300

Query: 301 RLNWDIKPTSDVDILTTAGERPTWRHAAPMTRCRGAIRGCAELRI 346
           RLNWDIKPTSDVDILTT GERPTWRHAA MT+C GAIRGCA LRI
Sbjct: 301 RLNWDIKPTSDVDILTTGGERPTWRHAASMTKCCGAIRGCARLRI 345

[Close]

BLAST of Moc06g33790.1 vs. ExPASy TrEMBL
Match: A0A6J1ESG5 (F-box/kelch-repeat protein SKIP30-like OS=Cucurbita moschata OX=3662 GN=LOC111437365 PE=4 SV=1)

HSP 1 Score: 649.0 bits (1673), Expect = 1.1e-182
Identity = 304/345 (88.12%), Postives = 320/345 (92.75%), Query Frame = 0


Query: 1   MSELIDGLPDAVALRCLARVPFHLYQTLELVSHSWKAAIRSAELFRVRREIGSSENLLCV 60
           MSELID LPDAVALRCLARVPFHLY  LELVSHSW+AAI SAEL+RVR+EIGSSE+LLCV
Sbjct: 1   MSELIDRLPDAVALRCLARVPFHLYPKLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV 60

Query: 61  CAFEPENLWQLYDPLRDLWITLPVFPSKIRHLAHFGAVSTAGKLFVVGGGSDAVDPLTGD 120
           CAFEPENLWQLYDPLRDLW+T+PV PSKIRHLA FGAVSTAGKLFV+GGGSD+VDPLTGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPVIHKWSQRAPMLVARAMFACCVLGGKIVVAGGFTSCRKSISQAEV 180
           QDRNFATNEVWSYDPVI +WSQ A MLV RAMFACCVL GKIVVAGGFTSCRKSISQAE+
Sbjct: 121 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM 180

Query: 181 YDPDKDVWIPLPDLHHTHNSACTGAVIGGKLHVLHKGLSTVQIFDNVRPGWRVEDYGWLQ 240
           YDPDKD WIPLPDLHHTH+SACTG VIGGKLHVLHKGLSTVQIF+N RPGWRVEDYGWLQ
Sbjct: 181 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ 240

Query: 241 GPMVVVQDSLYVMSHGLIFKHDKEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300
           GPM VVQ SLYVMSHG IFKHD E +KVVISASEFRQRIGFAM+ LRDEIYVIGGDIGPD
Sbjct: 241 GPMTVVQGSLYVMSHGHIFKHDGEAKKVVISASEFRQRIGFAMMSLRDEIYVIGGDIGPD 300

Query: 301 RLNWDIKPTSDVDILTTAGERPTWRHAAPMTRCRGAIRGCAELRI 346
           RLNWD+KPTSDVDILTT GERPTWR A  MTRC GAIRGCA+LRI
Sbjct: 301 RLNWDVKPTSDVDILTTGGERPTWRQATSMTRCHGAIRGCAQLRI 345

[Close]

BLAST of Moc06g33790.1 vs. ExPASy TrEMBL
Match: A0A6J1K7U2 (F-box/kelch-repeat protein SKIP30-like OS=Cucurbita maxima OX=3661 GN=LOC111491436 PE=4 SV=1)

HSP 1 Score: 648.7 bits (1672), Expect = 1.4e-182
Identity = 303/345 (87.83%), Postives = 320/345 (92.75%), Query Frame = 0


Query: 1   MSELIDGLPDAVALRCLARVPFHLYQTLELVSHSWKAAIRSAELFRVRREIGSSENLLCV 60
           MSELID LPDAVALRCLARVPFHLY  LELVSHSW+AAI SAEL+RVR+EIGSSE+LLCV
Sbjct: 1   MSELIDRLPDAVALRCLARVPFHLYPQLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV 60

Query: 61  CAFEPENLWQLYDPLRDLWITLPVFPSKIRHLAHFGAVSTAGKLFVVGGGSDAVDPLTGD 120
           CAFEPENLWQLYDPLRDLW+T+PV PSKIRHLA FGAVSTAGKLFV+GGGSD+VDPLTGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPVIHKWSQRAPMLVARAMFACCVLGGKIVVAGGFTSCRKSISQAEV 180
           QDRNFATNEVWSYDPVI +WSQ A MLV RAMFACCVL GKIVVAGGFTSCRKSISQAE+
Sbjct: 121 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM 180

Query: 181 YDPDKDVWIPLPDLHHTHNSACTGAVIGGKLHVLHKGLSTVQIFDNVRPGWRVEDYGWLQ 240
           YDPDKD WIPLPDLHHTH+SACTG VIGGKLHVLHKGLSTVQIF+N RPGWRVEDYGWLQ
Sbjct: 181 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ 240

Query: 241 GPMVVVQDSLYVMSHGLIFKHDKEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300
           GPM VVQ SLYVMSHG IFKHD E +KV+ISASEFRQRIGFAM+ LRDEIYVIGGDIGPD
Sbjct: 241 GPMTVVQGSLYVMSHGHIFKHDGEAKKVIISASEFRQRIGFAMMSLRDEIYVIGGDIGPD 300

Query: 301 RLNWDIKPTSDVDILTTAGERPTWRHAAPMTRCRGAIRGCAELRI 346
           RLNWD+KPTSDVDILTT GERPTWR A  MTRC GAIRGCA+LRI
Sbjct: 301 RLNWDVKPTSDVDILTTGGERPTWRRATSMTRCHGAIRGCAQLRI 345

[Close]

BLAST of Moc06g33790.1 vs. TAIR 10
Match: AT3G63220.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 528.1 bits (1359), Expect = 5.3e-150
Identity = 240/345 (69.57%), Postives = 285/345 (82.61%), Query Frame = 0


Query: 1   MSELIDGLPDAVALRCLARVPFHLYQTLELVSHSWKAAIRSAELFRVRREIGSSENLLCV 60
           MS L+DG+P+AVALRCLA VP HL+  LELVS SW+AAIRS ELFRVR+E+ SSE+LLCV
Sbjct: 1   MSGLLDGIPEAVALRCLAHVPLHLHPNLELVSRSWRAAIRSHELFRVRKELRSSEHLLCV 60

Query: 61  CAFEPENLWQLYDPLRDLWITLPVFPSKIRHLAHFGAVSTAGKLFVVGGGSDAVDPLTGD 120
           CAF+PEN+WQ+Y P  D W+TLP+ PS+IRHLAHFGAV+TAG LFV+GGGSDAV P+TGD
Sbjct: 61  CAFDPENIWQVYSPNCDRWLTLPLLPSRIRHLAHFGAVTTAGMLFVLGGGSDAVSPVTGD 120

Query: 121 QDRNFATNEVWSYDPVIHKWSQRAPMLVARAMFACCVLGGKIVVAGGFTSCRKSISQAEV 180
            D  FAT++VWSYD V  +W+ RA MLV RAMFACCVL GKIVVAGGFT+CRKSIS AE+
Sbjct: 121 HDGTFATDQVWSYDFVQRQWTPRASMLVPRAMFACCVLQGKIVVAGGFTTCRKSISGAEM 180

Query: 181 YDPDKDVWIPLPDLHHTHNSACTGAVIGGKLHVLHKGLSTVQIFDNVRPGWRVEDYGWLQ 240
           YDP+ DVW  +PDLH THNSAC+G V+ GK+HVLHKGLSTVQ+ ++V+ GW V+DYGW Q
Sbjct: 181 YDPENDVWTSIPDLHQTHNSACSGLVVNGKVHVLHKGLSTVQVLESVKLGWDVKDYGWPQ 240

Query: 241 GPMVVVQDSLYVMSHGLIFKHDKEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300
           GPMVVV+D LYVMSHGL+FK + +  K+V SASEF++RIG AM  L DE+ ++GG IGPD
Sbjct: 241 GPMVVVEDVLYVMSHGLVFKQEGDTWKMVASASEFKRRIGMAMTSLSDEVLIVGGVIGPD 300

Query: 301 RLNWDIKPTSDVDILTTAGERPTWRHAAPMTRCRGAIRGCAELRI 346
           RLNWDIKP SDVD LT   +RP WR  APMTRCRG I GC +L I
Sbjct: 301 RLNWDIKPLSDVDALTVGNDRPAWRSVAPMTRCRGTILGCTQLTI 345

[Close]

BLAST of Moc06g33790.1 vs. TAIR 10
Match: AT3G63220.2 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 528.1 bits (1359), Expect = 5.3e-150
Identity = 240/345 (69.57%), Postives = 285/345 (82.61%), Query Frame = 0


Query: 1   MSELIDGLPDAVALRCLARVPFHLYQTLELVSHSWKAAIRSAELFRVRREIGSSENLLCV 60
           MS L+DG+P+AVALRCLA VP HL+  LELVS SW+AAIRS ELFRVR+E+ SSE+LLCV
Sbjct: 8   MSGLLDGIPEAVALRCLAHVPLHLHPNLELVSRSWRAAIRSHELFRVRKELRSSEHLLCV 67

Query: 61  CAFEPENLWQLYDPLRDLWITLPVFPSKIRHLAHFGAVSTAGKLFVVGGGSDAVDPLTGD 120
           CAF+PEN+WQ+Y P  D W+TLP+ PS+IRHLAHFGAV+TAG LFV+GGGSDAV P+TGD
Sbjct: 68  CAFDPENIWQVYSPNCDRWLTLPLLPSRIRHLAHFGAVTTAGMLFVLGGGSDAVSPVTGD 127

Query: 121 QDRNFATNEVWSYDPVIHKWSQRAPMLVARAMFACCVLGGKIVVAGGFTSCRKSISQAEV 180
            D  FAT++VWSYD V  +W+ RA MLV RAMFACCVL GKIVVAGGFT+CRKSIS AE+
Sbjct: 128 HDGTFATDQVWSYDFVQRQWTPRASMLVPRAMFACCVLQGKIVVAGGFTTCRKSISGAEM 187

Query: 181 YDPDKDVWIPLPDLHHTHNSACTGAVIGGKLHVLHKGLSTVQIFDNVRPGWRVEDYGWLQ 240
           YDP+ DVW  +PDLH THNSAC+G V+ GK+HVLHKGLSTVQ+ ++V+ GW V+DYGW Q
Sbjct: 188 YDPENDVWTSIPDLHQTHNSACSGLVVNGKVHVLHKGLSTVQVLESVKLGWDVKDYGWPQ 247

Query: 241 GPMVVVQDSLYVMSHGLIFKHDKEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300
           GPMVVV+D LYVMSHGL+FK + +  K+V SASEF++RIG AM  L DE+ ++GG IGPD
Sbjct: 248 GPMVVVEDVLYVMSHGLVFKQEGDTWKMVASASEFKRRIGMAMTSLSDEVLIVGGVIGPD 307

Query: 301 RLNWDIKPTSDVDILTTAGERPTWRHAAPMTRCRGAIRGCAELRI 346
           RLNWDIKP SDVD LT   +RP WR  APMTRCRG I GC +L I
Sbjct: 308 RLNWDIKPLSDVDALTVGNDRPAWRSVAPMTRCRGTILGCTQLTI 352

[Close]

BLAST of Moc06g33790.1 vs. TAIR 10
Match: AT1G16250.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 129.8 bits (325), Expect = 4.2e-30
Identity = 109/376 (28.99%), Postives = 159/376 (42.29%), Query Frame = 0


Query: 4   LIDGLPDAVALRCLARVPFHLYQTLELVSHSWKAAIRSAELFRVRREIGSSENLLCVCAF 63
           +I GLPD +ALRC+A++    +  LE VS  W+  +R A+    +   G S + L V   
Sbjct: 8   IIPGLPDDLALRCIAKLSHGYHGVLECVSRGWRDLVRGADYSCYKARNGWSGSWLFVLTE 67

Query: 64  EPENLWQLYDPLRDLWITLPVFPSKIR--HLAHFGAVSTAGKLFVVGGGSDAVDPLTGDQ 123
             +N W  YDP  D W  LP   +     H + F  V  +  L V+ GG  A    +   
Sbjct: 68  RSKNQWVAYDPEADRWHPLPRTRAVQDGWHHSGFACVCVSNCLLVI-GGCYAPSVSSFPH 127

Query: 124 DRNFATNEVWSYDPVIHKWSQRAPMLVARAMFACCVLGGKIVVAGGFT-SCRKSISQAEV 183
            +   T +V  +DP   +W   A M   R  FAC  + GK+ VAGG   +  + I  AEV
Sbjct: 128 QKPVVTKDVMRFDPFKKQWKMVASMRTPRTHFACTSVSGKVYVAGGRNLTHSRGIPSAEV 187

Query: 184 YDPDKDVWIPLPDLHHTHNSACTGAVIGGKLHVLHKGL-----STVQIFDNVRPGWRVED 243
           YDP  D W  LP +       C+G    G  HVL   +     ++ ++F+     W   +
Sbjct: 188 YDPVADRWEELPAMPRPQMD-CSGLSYRGCFHVLSDQVGFAEQNSSEVFNPRDMTWSTVE 247

Query: 244 YGW-----LQ-GPMVVVQDSLYVM---SHGLIFKHDKE---------VRKVVI-SASEFR 303
             W     +Q    V+  D +Y +      LI   D +         V  VV+ +     
Sbjct: 248 DVWPFSRAMQFAVQVMKNDRVYTIVDWGESLIKTRDTDEGEWYNVGSVPSVVLPNHPREL 307

Query: 304 QRIGFAMIGLRDEIYVIGGDIGPDRLNWDIKPTSDVDI-------LTTAGERP-TWRHAA 344
           +  G+    LR+E+YVIGG +    L W+       DI       +    +RP  WR   
Sbjct: 308 EAFGYGFAALRNELYVIGGKV----LKWEESGAGRFDIVRLPVVRVCNPLDRPLNWRETK 367

[Close]

BLAST of Moc06g33790.1 vs. TAIR 10
Match: AT1G67480.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 109.8 bits (273), Expect = 4.5e-24
Identity = 71/214 (33.18%), Postives = 100/214 (46.73%), Query Frame = 0


Query: 4   LIDGLPDAVALRCLARVPFHLYQTLELVSHSWKAAIRSAELFRVRREIGSSENLLCVCAF 63
           LI GLPD VA +CLA VP   + ++  V   W+  ++S E   VRR  G  E  L V   
Sbjct: 39  LIPGLPDDVAKQCLALVPRARFPSMGSVCKKWRFVVQSKEFITVRRLAGMLEEWLYVLTM 98

Query: 64  E---PENLWQLYDPLRDLWITLPVFPSKIRHLAHFGAVSTAGKLFVVGGGSDAVDPLTGD 123
                +N W++ D L     +LP  P   +    F  V   GKL V+ G       L   
Sbjct: 99  NAGGKDNRWEVMDCLGQKLSSLPPMPGPAK--TGFKVVVVDGKLLVIAGCCMINGSLV-- 158

Query: 124 QDRNFATNEVWSYDPVIHKWSQRAPMLVARAMFACCVLGGKIVVAGGFTSCRKSISQAEV 183
                A+ +V+ YD  ++ WS+ A + VAR  FAC  + G + V GG     +S+S AEV
Sbjct: 159 -----ASADVYQYDTCLNSWSRLADLEVARYDFACAEVNGHVYVVGGHGVDGESLSSAEV 218

Query: 184 YDPDKDVWIPLPDLHHTHNSACTGAVIGGKLHVL 215
           YDP+   W  +  L       C  +   GKL+V+
Sbjct: 219 YDPETCTWTFIESLRRP-RWGCFASAFNGKLYVM 242

[Close]

BLAST of Moc06g33790.1 vs. TAIR 10
Match: AT1G67480.2 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 109.8 bits (273), Expect = 4.5e-24
Identity = 71/214 (33.18%), Postives = 100/214 (46.73%), Query Frame = 0


Query: 4   LIDGLPDAVALRCLARVPFHLYQTLELVSHSWKAAIRSAELFRVRREIGSSENLLCVCAF 63
           LI GLPD VA +CLA VP   + ++  V   W+  ++S E   VRR  G  E  L V   
Sbjct: 39  LIPGLPDDVAKQCLALVPRARFPSMGSVCKKWRFVVQSKEFITVRRLAGMLEEWLYVLTM 98

Query: 64  E---PENLWQLYDPLRDLWITLPVFPSKIRHLAHFGAVSTAGKLFVVGGGSDAVDPLTGD 123
                +N W++ D L     +LP  P   +    F  V   GKL V+ G       L   
Sbjct: 99  NAGGKDNRWEVMDCLGQKLSSLPPMPGPAK--TGFKVVVVDGKLLVIAGCCMINGSLV-- 158

Query: 124 QDRNFATNEVWSYDPVIHKWSQRAPMLVARAMFACCVLGGKIVVAGGFTSCRKSISQAEV 183
                A+ +V+ YD  ++ WS+ A + VAR  FAC  + G + V GG     +S+S AEV
Sbjct: 159 -----ASADVYQYDTCLNSWSRLADLEVARYDFACAEVNGHVYVVGGHGVDGESLSSAEV 218

Query: 184 YDPDKDVWIPLPDLHHTHNSACTGAVIGGKLHVL 215
           YDP+   W  +  L       C  +   GKL+V+
Sbjct: 219 YDPETCTWTFIESLRRP-RWGCFASAFNGKLYVM 242

The following BLAST results are available for this feature:

BLAST of Moc06g33790.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146023.1	6.4e-206	100.00	F-box/kelch-repeat protein SKIP30 [Momordica charantia] >XP_022146024.1 F-box/ke...	[more]
XP_023511586.1	7.4e-186	90.43	F-box/kelch-repeat protein SKIP30 [Cucurbita pepo subsp. pepo]	[more]
XP_022963882.1	8.2e-185	89.86	F-box/kelch-repeat protein SKIP30 [Cucurbita moschata] >XP_022967369.1 F-box/kel...	[more]
XP_022931065.1	2.2e-182	88.12	F-box/kelch-repeat protein SKIP30-like [Cucurbita moschata] >XP_022931066.1 F-bo...	[more]
XP_022996118.1	2.9e-182	87.83	F-box/kelch-repeat protein SKIP30-like [Cucurbita maxima] >XP_022996119.1 F-box/...	[more]

BLAST of Moc06g33790.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M1W7	7.5e-149	69.57	F-box/kelch-repeat protein SKIP30 OS=Arabidopsis thaliana OX=3702 GN=SKIP30 PE=1...	[more]
Q0WW40	5.9e-29	28.99	F-box/kelch-repeat protein At1g16250 OS=Arabidopsis thaliana OX=3702 GN=At1g1625...	[more]
Q9CAG8	6.4e-23	33.18	F-box/kelch-repeat protein At1g67480 OS=Arabidopsis thaliana OX=3702 GN=At1g6748...	[more]
Q9LM55	2.4e-22	28.23	F-box/kelch-repeat protein At1g22040 OS=Arabidopsis thaliana OX=3702 GN=At1g2204...	[more]
Q93W93	3.0e-20	32.82	F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana OX=3702 GN=At1g5527...	[more]

BLAST of Moc06g33790.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CW43	3.1e-206	100.00	F-box/kelch-repeat protein SKIP30 OS=Momordica charantia OX=3673 GN=LOC111015334...	[more]
A0A6J1HWH7	4.0e-185	89.86	F-box/kelch-repeat protein SKIP30 OS=Cucurbita maxima OX=3661 GN=LOC111466917 PE...	[more]
A0A6J1HGE3	4.0e-185	89.86	F-box/kelch-repeat protein SKIP30 OS=Cucurbita moschata OX=3662 GN=LOC111464058 ...	[more]
A0A6J1ESG5	1.1e-182	88.12	F-box/kelch-repeat protein SKIP30-like OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1K7U2	1.4e-182	87.83	F-box/kelch-repeat protein SKIP30-like OS=Cucurbita maxima OX=3661 GN=LOC1114914...	[more]

BLAST of Moc06g33790.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G63220.1	5.3e-150	69.57	Galactose oxidase/kelch repeat superfamily protein	[more]
AT3G63220.2	5.3e-150	69.57	Galactose oxidase/kelch repeat superfamily protein	[more]
AT1G16250.1	4.2e-30	28.99	Galactose oxidase/kelch repeat superfamily protein	[more]
AT1G67480.1	4.5e-24	33.18	Galactose oxidase/kelch repeat superfamily protein	[more]
AT1G67480.2	4.5e-24	33.18	Galactose oxidase/kelch repeat superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006652	Kelch repeat type 1	SMART	SM00612	kelc_smart	coord: 103..160 e-value: 2.1E-5 score: 33.9 coord: 161..209 e-value: 1.5E-5 score: 34.4
IPR006652	Kelch repeat type 1	PFAM	PF01344	Kelch_1	coord: 278..330 e-value: 3.6E-4 score: 20.1 coord: 149..194 e-value: 5.0E-12 score: 45.2 coord: 92..146 e-value: 7.0E-10 score: 38.3
IPR015915	Kelch-type beta propeller	GENE3D	2.120.10.80		coord: 62..341 e-value: 4.4E-36 score: 126.3
IPR015915	Kelch-type beta propeller	SUPERFAMILY	117281	Kelch motif	coord: 61..333
None	No IPR available	PANTHER	PTHR24414:SF40	F-BOX/KELCH-REPEAT PROTEIN SKIP30	coord: 2..345
None	No IPR available	PANTHER	PTHR24414	F-BOX/KELCH-REPEAT PROTEIN SKIP4	coord: 2..345

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Moc06g33790	Moc06g33790	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Moc06g33790.1.exon1	Moc06g33790.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Moc06g33790.1	cds.Moc06g33790.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Moc06g33790.1	Moc06g33790.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding