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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGAAGTCGAGTGCCGACAGAAGAGACAAGAGCCAGTATTGCCTTTTCCACCGGGACCATGGGCATTCAACCAGGAATTGTATTCAGTTGAAGGATGAAATCGAAGCACTGATCCAGAATGGGTATTTGAAAGAGTTCGTCGGTGAGCCCAGGGCCGAGGCCAACCACGGATGGTCGAGGTCGAGCCTGACCAAAGATGGCCGAGACAAAGAAGAACCCCTACGAGAGATCAGAACCATCTTTGGAGGACCAGCTGGAGGAGGTTCAAGCAGGAAGAGGAAAACTATTGCCAGGGAAGCAAGGTCTGAAGCAGAATATCGAGGTATGTACTCTGTCCATCTAGCAAAGGCACACCCCTCTTTGGAGTTCACTGAGGCTGAGGCAACAAGCATTCATCAGCCACATAATGATGCCCTAGTGGTCACTCTAGTTATAGTCAATGTGAAAATCCATCGGATCCTAATTGATGGAGGAAGCTCGGCTGATGTCCTTTCTCTAGCGGCCTTTAAAGCAATGCAGTTAGAGAGGGAACTCTTAAAGCCACCCCACTTGTAG mRNA sequence ATGAAGTCGAGTGCCGACAGAAGAGACAAGAGCCAGTATTGCCTTTTCCACCGGGACCATGGGCATTCAACCAGGAATTGTATTCAGTTGAAGGATGAAATCGAAGCACTGATCCAGAATGGGTATTTGAAAGAGTTCGTCGGTGAGCCCAGGGCCGAGGCCAACCACGGATGGTCGAGGTCGAGCCTGACCAAAGATGGCCGAGACAAAGAAGAACCCCTACGAGAGATCAGAACCATCTTTGGAGGACCAGCTGGAGGAGGTTCAAGCAGGAAGAGGAAAACTATTGCCAGGGAAGCAAGGTCTGAAGCAGAATATCGAGGTATGTACTCTGTCCATCTAGCAAAGGCACACCCCTCTTTGGAGTTCACTGAGGCTGAGGCAACAAGCATTCATCAGCCACATAATGATGCCCTAGTGGTCACTCTAGTTATAGTCAATGTGAAAATCCATCGGATCCTAATTGATGGAGGAAGCTCGGCTGATGTCCTTTCTCTAGCGGCCTTTAAAGCAATGCAGTTAGAGAGGGAACTCTTAAAGCCACCCCACTTGTAG Coding sequence (CDS) ATGAAGTCGAGTGCCGACAGAAGAGACAAGAGCCAGTATTGCCTTTTCCACCGGGACCATGGGCATTCAACCAGGAATTGTATTCAGTTGAAGGATGAAATCGAAGCACTGATCCAGAATGGGTATTTGAAAGAGTTCGTCGGTGAGCCCAGGGCCGAGGCCAACCACGGATGGTCGAGGTCGAGCCTGACCAAAGATGGCCGAGACAAAGAAGAACCCCTACGAGAGATCAGAACCATCTTTGGAGGACCAGCTGGAGGAGGTTCAAGCAGGAAGAGGAAAACTATTGCCAGGGAAGCAAGGTCTGAAGCAGAATATCGAGGTATGTACTCTGTCCATCTAGCAAAGGCACACCCCTCTTTGGAGTTCACTGAGGCTGAGGCAACAAGCATTCATCAGCCACATAATGATGCCCTAGTGGTCACTCTAGTTATAGTCAATGTGAAAATCCATCGGATCCTAATTGATGGAGGAAGCTCGGCTGATGTCCTTTCTCTAGCGGCCTTTAAAGCAATGCAGTTAGAGAGGGAACTCTTAAAGCCACCCCACTTGTAG Protein sequence MKSSADRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPRAEANHGWSRSSLTKDGRDKEEPLREIRTIFGGPAGGGSSRKRKTIAREARSEAEYRGMYSVHLAKAHPSLEFTEAEATSIHQPHNDALVVTLVIVNVKIHRILIDGGSSADVLSLAAFKAMQLERELLKPPHL
Homology
BLAST of Lag0036382 vs. NCBI nr
Match: XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia]) HSP 1 Score: 182.6 bits (462), Expect = 3.1e-42 Identity = 91/180 (50.56%), Postives = 122/180 (67.78%), Query Frame = 0 Query: 1 MKSSADRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPRAEANHGWSR 60 MK+S+ +R K +YCLFHRDHGH+T++C LK+E+E LI+ GYLKE+V EP+A Sbjct: 425 MKASSAKRSKGRYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEEPKA-------- 484
Query: 61 SSLTKDGRDKEEPLREIRTIFGGPAGGGSSRKRKTIAREARSEAEYRGMYSVHLAKAHPS 120 T++G + P REIRTI GGP S RKRK REAR+ E +Y + + Sbjct: 485 ---TQNGESDKSPAREIRTIMGGPIERESGRKRKADVREARTSREQNEVYHAYTTNRPVT 544
Query: 121 LEFTEAEATSIHQPHNDALVVTLVIVNVKIHRILIDGGSSADVLSLAAFKAMQLERELLK 180 +EF+E EAT + PHNDALV+ L I NVK+HR+L+DGGSSAD++S A+KAM L ++LK Sbjct: 545 IEFSEDEATHLLHPHNDALVIXLKIANVKVHRVLVDGGSSADIJSWTAYKAMDLXEKVLK 593
BLAST of Lag0036382 vs. NCBI nr
Match: XP_022155902.1 (uncharacterized protein LOC111022905 [Momordica charantia]) HSP 1 Score: 168.7 bits (426), Expect = 4.7e-38 Identity = 83/180 (46.11%), Postives = 122/180 (67.78%), Query Frame = 0 Query: 1 MKSSADRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPRAEANHGWSR 60 MK+ + +R K +Y LFHRDHGH+T++C LK+E+E LI+ GYLKE+V +P+ Sbjct: 1 MKAPSTKRSKGRYWLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEDPK--------- 60
Query: 61 SSLTKDGRDKEEPLREIRTIFGGPAGGGSSRKRKTIAREARSEAEYRGMYSVHLAKAHPS 120 +T++G + + P REI+TI GGP S RK K REAR+ + +Y ++A + Sbjct: 61 --VTQNGENDKSPAREIQTIMGGPIESESGRKIKVDVREARTNLGHNEVYYTYIADRSAT 120
Query: 121 LEFTEAEATSIHQPHNDALVVTLVIVNVKIHRILIDGGSSADVLSLAAFKAMQLERELLK 180 +EF++ EAT + PHNDALV+TL I NVK+HRIL+DGG+SAD++S A+K M + ++LK Sbjct: 121 IEFSKDEATHLLHPHNDALVITLKIANVKVHRILVDGGNSADIISWTAYKVMDVGEKVLK 169
BLAST of Lag0036382 vs. NCBI nr
Match: XP_022158827.1 (uncharacterized protein LOC111025291 [Momordica charantia]) HSP 1 Score: 167.9 bits (424), Expect = 8.0e-38 Identity = 84/180 (46.67%), Postives = 118/180 (65.56%), Query Frame = 0 Query: 1 MKSSADRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPRAEANHGWSR 60 MK + + +K +YCLFHRDHGH+T++C LK+E+E L + GYLKE+V + +A Sbjct: 1 MKDPSTKLNKGRYCLFHRDHGHATQDCFDLKEEVEGLFRRGYLKEYVEDSKA-------- 60
Query: 61 SSLTKDGRDKEEPLREIRTIFGGPAGGGSSRKRKTIAREARSEAEYRGMYSVHLAKAHPS 120 T++ + + P REIRTI GGP S RKRK REA++ +Y ++ + Sbjct: 61 ---TQNSENDKSPAREIRTIMGGPIERESGRKRKADVREAKASLGQNEVYHAYIMNQSVA 120
Query: 121 LEFTEAEATSIHQPHNDALVVTLVIVNVKIHRILIDGGSSADVLSLAAFKAMQLERELLK 180 +EF+E EAT + PHNDALV+TL I N K+HRIL+DGGSSAD++S A+KAM L ++LK Sbjct: 121 IEFSEDEATHLLHPHNDALVITLKIANXKVHRILVDGGSSADIISWTAYKAMDLGEKVLK 169
BLAST of Lag0036382 vs. NCBI nr
Match: XP_022158828.1 (uncharacterized protein LOC111025292 [Momordica charantia]) HSP 1 Score: 167.2 bits (422), Expect = 1.4e-37 Identity = 84/180 (46.67%), Postives = 117/180 (65.00%), Query Frame = 0 Query: 1 MKSSADRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPRAEANHGWSR 60 MK + + K +YCLFHRDHGH+T++C LK+E+E L + GYLKE+V + +A Sbjct: 1 MKDPSTKLXKGRYCLFHRDHGHATQDCFDLKEEVEGLFRRGYLKEYVEDSKA-------- 60
Query: 61 SSLTKDGRDKEEPLREIRTIFGGPAGGGSSRKRKTIAREARSEAEYRGMYSVHLAKAHPS 120 T++ + + P REIRTI GGP S RKRK REA++ +Y ++ + Sbjct: 61 ---TQNSENDKSPAREIRTIMGGPIERESGRKRKADVREAKASLGQNEVYHAYIMNQSVA 120
Query: 121 LEFTEAEATSIHQPHNDALVVTLVIVNVKIHRILIDGGSSADVLSLAAFKAMQLERELLK 180 +EF+E EAT + PHNDALV+TL I N K+HRIL+DGGSSAD++S A+KAM L ++LK Sbjct: 121 IEFSEDEATHLLHPHNDALVITLKIANXKVHRILVDGGSSADIISWTAYKAMDLGEKVLK 169
BLAST of Lag0036382 vs. NCBI nr
Match: XP_022158621.1 (uncharacterized protein LOC111025072 [Momordica charantia]) HSP 1 Score: 167.2 bits (422), Expect = 1.4e-37 Identity = 83/180 (46.11%), Postives = 117/180 (65.00%), Query Frame = 0 Query: 1 MKSSADRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPRAEANHGWSR 60 MK+ + +R K +YCLFHRDHGH+T++C L +E+E LI+ GYL+E+V EP+A Sbjct: 15 MKAPSTKRSKGRYCLFHRDHGHATQDCFDLNEEVEGLIRRGYLEEYVEEPKA-------- 74
Query: 61 SSLTKDGRDKEEPLREIRTIFGGPAGGGSSRKRKTIAREARSEAEYRGMYSVHLAKAHPS 120 T++G + P REIRTI GGP S RKRK +EAR+ E +Y + + Sbjct: 75 ---TQNGESDKSPAREIRTIMGGPIERESGRKRKADVQEARANREQNEVYHAYTTNRPVT 134
Query: 121 LEFTEAEATSIHQPHNDALVVTLVIVNVKIHRILIDGGSSADVLSLAAFKAMQLERELLK 180 ++F+E EAT + PHNDAL +TL I NVK+HRIL+DGG+ AD++S A+ M L ++LK Sbjct: 135 IQFSEDEATHLLHPHNDALDITLKIANVKVHRILVDGGNLADIISWTAYNVMDLGEKVLK 183
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 54..94 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 62..77 |
Relationships
The following mRNA feature(s) are a part of this gene:
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