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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGTCAATGGAGATACTAGTCCTTCCTTATATACCCATGATCATCCCCTTATCTAGCCGATGTGGGACTTTGGTCGCACTCCCAACATGGGTCCGTGAAATTCGTGAAAAGAATTCTGGGGTTCGGCCATTGAAGGAGGAGAAAGAGTTAGAGGAGGAGGGAACGAGAGAGACGGTAAAAGGGGGTTGGGAAAAGAGATCTTGGTAGAGAGAGAGGGGAGACGCCGTTTGGTGAAGAAGATGAAGGAACAAAGGAGGAAGGAAATGGGAGCGAAAGAAAATCGATAGCTGGGGAGAGAGGAAAACGCCATTGGAGGATGAAGAGAAGAGAGAGGAAAGTTTCAGTCTGAAGCTTTTCTTTTTTTTGGTGTAAAGGTGTTCGGAAATGTCTGCAACGATCATCAAAATCTGACGACGGCAGCGGGGCTGGTTGGGCAAATGGAAGTTGAATTCGCGAAATGCGAGTGTTGTGGACTGACGGAGGAGTGTCCAGAAGCTTACATCTCCGGCGGTGGGGGAAGATCCGGCGGCGGCGGGAGGAGGCTCCGGCGATAG mRNA sequence ATGTCAATGGAGATACTAGTCCTTCCTTATATACCCATGATCATCCCCTTATCTAGCCGATGTGGGACTTTGGTCGCACTCCCAACATGGGTCCGTGAAATTCGTGAAAAGAATTCTGGGGTTCGGCCATTGAAGGAGGAGAAAGAGTTAGAGGAGGAGGGAACGAGAGAGACGGTGTTCGGAAATGTCTGCAACGATCATCAAAATCTGACGACGGCAGCGGGGCTGGTTGGGCAAATGGAAGTTGAATTCGCGAAATGCGAGTGTTGTGGACTGACGGAGGAGTGTCCAGAAGCTTACATCTCCGGCGGTGGGGGAAGATCCGGCGGCGGCGGGAGGAGGCTCCGGCGATAG Coding sequence (CDS) ATGTCAATGGAGATACTAGTCCTTCCTTATATACCCATGATCATCCCCTTATCTAGCCGATGTGGGACTTTGGTCGCACTCCCAACATGGGTCCGTGAAATTCGTGAAAAGAATTCTGGGGTTCGGCCATTGAAGGAGGAGAAAGAGTTAGAGGAGGAGGGAACGAGAGAGACGGTGTTCGGAAATGTCTGCAACGATCATCAAAATCTGACGACGGCAGCGGGGCTGGTTGGGCAAATGGAAGTTGAATTCGCGAAATGCGAGTGTTGTGGACTGACGGAGGAGTGTCCAGAAGCTTACATCTCCGGCGGTGGGGGAAGATCCGGCGGCGGCGGGAGGAGGCTCCGGCGATAG Protein sequence MSMEILVLPYIPMIIPLSSRCGTLVALPTWVREIREKNSGVRPLKEEKELEEEGTRETVFGNVCNDHQNLTTAAGLVGQMEVEFAKCECCGLTEECPEAYISGGGGRSGGGGRRLRR
Homology
BLAST of Lag0019957 vs. NCBI nr
Match: XP_038901315.1 (uncharacterized protein LOC120088232 [Benincasa hispida]) HSP 1 Score: 59.7 bits (143), Expect = 2.0e-05 Identity = 26/31 (83.87%), Postives = 27/31 (87.10%), Query Frame = 0 Query: 73 AAGLVGQMEVEFAKCECCGLTEECPEAYISG 104 AA L+GQMEVEFAKCECCGLTEEC AYI G Sbjct: 14 AAVLIGQMEVEFAKCECCGLTEECTGAYIEG 44
BLAST of Lag0019957 vs. NCBI nr
Match: KAA0053489.1 (hypothetical protein E6C27_scaffold190G00380 [Cucumis melo var. makuwa]) HSP 1 Score: 58.5 bits (140), Expect = 4.4e-05 Identity = 25/31 (80.65%), Postives = 27/31 (87.10%), Query Frame = 0 Query: 73 AAGLVGQMEVEFAKCECCGLTEECPEAYISG 104 AA L+GQM+VEFAKCECCGLTEEC AYI G Sbjct: 23 AAVLIGQMDVEFAKCECCGLTEECTGAYIEG 53
BLAST of Lag0019957 vs. NCBI nr
Match: KGN58440.1 (hypothetical protein Csa_001716 [Cucumis sativus]) HSP 1 Score: 58.5 bits (140), Expect = 4.4e-05 Identity = 25/31 (80.65%), Postives = 27/31 (87.10%), Query Frame = 0 Query: 73 AAGLVGQMEVEFAKCECCGLTEECPEAYISG 104 AA L+GQM+VEFAKCECCGLTEEC AYI G Sbjct: 14 AAVLIGQMDVEFAKCECCGLTEECTGAYIEG 44
BLAST of Lag0019957 vs. NCBI nr
Match: XP_022777231.1 (uncharacterized protein LOC111318623 [Durio zibethinus]) HSP 1 Score: 55.8 bits (133), Expect = 2.8e-04 Identity = 24/31 (77.42%), Postives = 26/31 (83.87%), Query Frame = 0 Query: 71 TTAAGLVGQMEVEFAKCECCGLTEECPEAYI 102 TT+A LV Q EVEFAKC+CCGLTEEC AYI Sbjct: 21 TTSAKLVAQSEVEFAKCDCCGLTEECTPAYI 51
BLAST of Lag0019957 vs. NCBI nr
Match: XP_021294398.1 (uncharacterized protein LOC110424195 [Herrania umbratica]) HSP 1 Score: 55.1 bits (131), Expect = 4.8e-04 Identity = 24/30 (80.00%), Postives = 25/30 (83.33%), Query Frame = 0 Query: 72 TAAGLVGQMEVEFAKCECCGLTEECPEAYI 102 TAA LV Q EVEFAKC+CCGLTEEC AYI Sbjct: 22 TAAKLVAQSEVEFAKCDCCGLTEECTPAYI 51
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038901315.1 | 2.0e-05 | 83.87 | uncharacterized protein LOC120088232 [Benincasa hispida] | [more] |
KAA0053489.1 | 4.4e-05 | 80.65 | hypothetical protein E6C27_scaffold190G00380 [Cucumis melo var. makuwa] | [more] |
KGN58440.1 | 4.4e-05 | 80.65 | hypothetical protein Csa_001716 [Cucumis sativus] | [more] |
XP_022777231.1 | 2.8e-04 | 77.42 | uncharacterized protein LOC111318623 [Durio zibethinus] | [more] |
XP_021294398.1 | 4.8e-04 | 80.00 | uncharacterized protein LOC110424195 [Herrania umbratica] | [more] |
Match Name | E-value | Identity | Description | |
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR012876 | Protein of unknown function DUF1677, plant | PFAM | PF07911 | DUF1677 | coord: 82..102 e-value: 3.1E-6 score: 27.5 |
Relationships
The following mRNA feature(s) are a part of this gene:
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