Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCTTTTGGAAGCTCAAAGAATGAAAACGACGCACCACTCTGCGCCAACAACTGTGGCTTCTATGGAAATCCGAAGAATCACAACTTGTGCTCCGTTTGCTACGCCGCTTTCCTCAGAGAAACCGGCGAAGATTCTCGACGACGAGAGAGCTCAAACGATGTCATTCGCTCAAAAAATCTGATCAGTGCAGAACTCGTTGAAACTCGTGATGCAGAACCAAATCTCGGAACGAGACGATCTCCGGCGGAAGCGGAGAGTTCCGATACTTCTGAATCGGTCGCCGATTTGAAGAATCCGGCGCCTAAAACCAAGAATAGATGCAAAATCTGCAAGAAGAAGGTCGGATTGTTGGGATTCAACTGCCGGTGTGGAGGTTCGTTCTGCGGTAAACATAGGCATCCTGAAGAGCATTCGTGCGACGTTGATCACAAGGTGATCGCCCGAGAGATTTTGGCGAAGCAAATGGTCGAATGCAAGGCCGATAAATTGGAATTTAGGGTTTAG
mRNA sequence
ATGGCTGCTTTTGGAAGCTCAAAGAATGAAAACGACGCACCACTCTGCGCCAACAACTGTGGCTTCTATGGAAATCCGAAGAATCACAACTTGTGCTCCGTTTGCTACGCCGCTTTCCTCAGAGAAACCGGCGAAGATTCTCGACGACGAGAGAGCTCAAACGATGTCATTCGCTCAAAAAATCTGATCAGTGCAGAACTCGTTGAAACTCGTGATGCAGAACCAAATCTCGGAACGAGACGATCTCCGGCGGAAGCGGAGAGTTCCGATACTTCTGAATCGGTCGCCGATTTGAAGAATCCGGCGCCTAAAACCAAGAATAGATGCAAAATCTGCAAGAAGAAGGTCGGATTGTTGGGATTCAACTGCCGGTGTGGAGGTTCGTTCTGCGGTAAACATAGGCATCCTGAAGAGCATTCGTGCGACGTTGATCACAAGGTGATCGCCCGAGAGATTTTGGCGAAGCAAATGGTCGAATGCAAGGCCGATAAATTGGAATTTAGGGTTTAG
Coding sequence (CDS)
ATGGCTGCTTTTGGAAGCTCAAAGAATGAAAACGACGCACCACTCTGCGCCAACAACTGTGGCTTCTATGGAAATCCGAAGAATCACAACTTGTGCTCCGTTTGCTACGCCGCTTTCCTCAGAGAAACCGGCGAAGATTCTCGACGACGAGAGAGCTCAAACGATGTCATTCGCTCAAAAAATCTGATCAGTGCAGAACTCGTTGAAACTCGTGATGCAGAACCAAATCTCGGAACGAGACGATCTCCGGCGGAAGCGGAGAGTTCCGATACTTCTGAATCGGTCGCCGATTTGAAGAATCCGGCGCCTAAAACCAAGAATAGATGCAAAATCTGCAAGAAGAAGGTCGGATTGTTGGGATTCAACTGCCGGTGTGGAGGTTCGTTCTGCGGTAAACATAGGCATCCTGAAGAGCATTCGTGCGACGTTGATCACAAGGTGATCGCCCGAGAGATTTTGGCGAAGCAAATGGTCGAATGCAAGGCCGATAAATTGGAATTTAGGGTTTAG
Protein sequence
MAAFGSSKNENDAPLCANNCGFYGNPKNHNLCSVCYAAFLRETGEDSRRRESSNDVIRSKNLISAELVETRDAEPNLGTRRSPAEAESSDTSESVADLKNPAPKTKNRCKICKKKVGLLGFNCRCGGSFCGKHRHPEEHSCDVDHKVIAREILAKQMVECKADKLEFRV
Homology
BLAST of Lag0019939 vs. NCBI nr
Match:
KAG7014809.1 (Zinc finger A20 and AN1 domain-containing stress-associated protein 10, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 245.0 bits (624), Expect = 4.7e-61
Identity = 121/169 (71.60%), Postives = 133/169 (78.70%), Query Frame = 0
Query: 1 MAAFGSSKNENDAPLCANNCGFYGNPKNHNLCSVCYAAFLRETGEDSRRRESSNDVIRSK 60
MA FGSSKN+NDAPLCANNCGFYG+PKN NLCS CYAAFL+ETGE+S R E+SN I
Sbjct: 1 MAGFGSSKNDNDAPLCANNCGFYGSPKNRNLCSFCYAAFLKETGENSERLENSNHRI--- 60
Query: 61 NLISAELVETRDAEPNLGTRRSPAEAESSDTSESVADLKNPAPKTKNRCKICKKKVGLLG 120
R+ EPNL RR P +SS+TSE VADL NPA KTK RCKICKKK+G+LG
Sbjct: 61 ----------REEEPNLRKRRFPWAGQSSETSEPVADLNNPANKTKIRCKICKKKIGMLG 120
Query: 121 FNCRCGGSFCGKHRHPEEHSCDVDHKVIAREILAKQMVECKADKLEFRV 170
FNCRCGG FC KHRHPEEHSCDVDHK I R+ILAK +VECKADKLEFRV
Sbjct: 121 FNCRCGGPFCCKHRHPEEHSCDVDHKAIGRQILAKHIVECKADKLEFRV 156
BLAST of Lag0019939 vs. NCBI nr
Match:
XP_022141121.1 (zinc finger A20 and AN1 domain-containing stress-associated protein 5-like [Momordica charantia])
HSP 1 Score: 224.2 bits (570), Expect = 8.7e-55
Identity = 117/172 (68.02%), Postives = 127/172 (73.84%), Query Frame = 0
Query: 7 SKNENDAPLCANNCGFYGNPKNHNLCSVCYAAFLRETGEDSRRRESSNDVIRSKNLISAE 66
S + +DA LCANNCGFYG PKN NLCSVCYAA L+ETGEDS RRESS+DV+ AE
Sbjct: 4 SGSASDAKLCANNCGFYGTPKNRNLCSVCYAASLKETGEDSGRRESSHDVVP-----GAE 63
Query: 67 LVETRDAEPNLGTRR---------SPAEAESSDTSESVADLKNPAPKTKNRCKICKKKVG 126
LV D P+ GTR S +E+ SS TS S A NPAPKTKNRC ICKKKVG
Sbjct: 64 LVGVHDEAPDFGTRESSPPAPASASASESTSSATSGSEAGSSNPAPKTKNRCTICKKKVG 123
Query: 127 LLGFNCRCGGSFCGKHRHPEEHSCDVDHKVIAREILAKQMVECKADKLEFRV 170
LLGFNCRCGG FCG+HRHPEEHSC VD K I REIL KQ+VECKADKLEFRV
Sbjct: 124 LLGFNCRCGGLFCGRHRHPEEHSCGVDRKAIGREILEKQIVECKADKLEFRV 170
BLAST of Lag0019939 vs. NCBI nr
Match:
XP_038876927.1 (zinc finger A20 and AN1 domain-containing stress-associated protein 10-like [Benincasa hispida])
HSP 1 Score: 217.6 bits (553), Expect = 8.1e-53
Identity = 111/169 (65.68%), Postives = 128/169 (75.74%), Query Frame = 0
Query: 1 MAAFGSSKNENDAPLCANNCGFYGNPKNHNLCSVCYAAFLRETGEDSRRRESSNDVIRSK 60
MAAF SSKN DAPLCANNCGFY NP N NLCSV YAAFL+ETGEDS RESS I+ +
Sbjct: 1 MAAFRSSKNGGDAPLCANNCGFYENPNNLNLCSVYYAAFLKETGEDSEPRESSKSQIKYE 60
Query: 61 NLISAELVETRDAEPNLGTRRSPAEAESSDTSESVADLKNPAPKTKNRCKICKKKVGLLG 120
EPN TR+ P+ +++S+T E+ NP PKT NRCKIC+KKVGLLG
Sbjct: 61 -------------EPNSETRQFPSVSQNSETCEN-----NPTPKTINRCKICRKKVGLLG 120
Query: 121 FNCRCGGSFCGKHRHPEEHSCDVDHKVIAREILAKQMVECKADKLEFRV 170
FNC+CGGSFCGKHR+PEEHSCDVDHK I R+ LAKQ+VECKA+KL+FRV
Sbjct: 121 FNCQCGGSFCGKHRYPEEHSCDVDHKAIGRKTLAKQIVECKANKLQFRV 151
BLAST of Lag0019939 vs. NCBI nr
Match:
KAG6576775.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 197.2 bits (500), Expect = 1.1e-46
Identity = 97/141 (68.79%), Postives = 107/141 (75.89%), Query Frame = 0
Query: 1 MAAFGSSKNENDAPLCANNCGFYGNPKNHNLCSVCYAAFLRETGEDSRRRESSNDVIRSK 60
MA FGSS N+NDAPLCANNCGFYG+PKN NLCS CYAAFL+ETGE+S R E+SN I
Sbjct: 862 MAGFGSSNNDNDAPLCANNCGFYGSPKNRNLCSFCYAAFLKETGENSERLENSNHRI--- 921
Query: 61 NLISAELVETRDAEPNLGTRRSPAEAESSDTSESVADLKNPAPKTKNRCKICKKKVGLLG 120
R+ EPNL RR P +SS+TSE VADL NPA KTK RCKICKKK+G+LG
Sbjct: 922 ----------REEEPNLRKRRFPWAGQSSETSEPVADLNNPANKTKIRCKICKKKIGMLG 981
Query: 121 FNCRCGGSFCGKHRHPEEHSC 142
FNCRCGG FC KHRHPEEHSC
Sbjct: 982 FNCRCGGPFCCKHRHPEEHSC 989
BLAST of Lag0019939 vs. NCBI nr
Match:
XP_031739041.1 (AN1-type zinc finger protein 6-like [Cucumis sativus])
HSP 1 Score: 187.2 bits (474), Expect = 1.2e-43
Identity = 99/170 (58.24%), Postives = 118/170 (69.41%), Query Frame = 0
Query: 1 MAAFGSSKNENDAPLCANNCGFYGNPKNHNLCSVCYAAFLRETGEDSRRRESSNDVIRSK 60
MA F SSKN ND LCANNCGFYGNP N NLCSVCYAAFL+ETG R++S SK
Sbjct: 1 MADFESSKNGNDPALCANNCGFYGNPNNRNLCSVCYAAFLKETGAKYFERQNS-----SK 60
Query: 61 NLISAELVETRDAEPNLGTRRSPAEAESSDTSESVADLKNPA-PKTKNRCKICKKKVGLL 120
+ I NL TR+S + + D +PA PKT+NRC+IC+KKVG++
Sbjct: 61 SQI------------NLETRQSSSFGVLENL--ETCDHNDPAPPKTQNRCEICQKKVGMI 120
Query: 121 GFNCRCGGSFCGKHRHPEEHSCDVDHKVIAREILAKQMVECKADKLEFRV 170
GF+CRCGG FCGKHR+PEEHSC DHK + R ILAKQ+VECKADKL+FR+
Sbjct: 121 GFSCRCGGCFCGKHRYPEEHSCGFDHKEVGRNILAKQIVECKADKLKFRI 151
BLAST of Lag0019939 vs. ExPASy Swiss-Prot
Match:
Q6NNI8 (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Arabidopsis thaliana OX=3702 GN=SAP1 PE=1 SV=1)
HSP 1 Score: 110.9 bits (276), Expect = 1.4e-23
Identity = 62/161 (38.51%), Postives = 88/161 (54.66%), Query Frame = 0
Query: 6 SSKNENDAPLCANNCGFYGNPKNHNLCSVCYAAFLRETGEDSRRRESSNDVIRSKNLISA 65
+S + ++ LC CGF+G+P N NLCS CY +R T E + +++ V +S N
Sbjct: 9 TSFSPSEPKLCVKGCGFFGSPSNMNLCSKCYRD-IRATEEQTASAKAA--VEKSLNPNKP 68
Query: 66 ELVETRDAEPNLGTRRSPAEAESSDTSESVADLKNPAPKTKNRCKICKKKVGLLGFNCRC 125
+ + E G S + + S+ +S A +P T RC C KKVG+ GF CRC
Sbjct: 69 KTQPQQSQEITQGVLGSGSSSSSTRGGDSAAAPLDPPKSTATRCLSCNKKVGVTGFKCRC 128
Query: 126 GGSFCGKHRHPEEHSCDVDHKVIAREILAKQMVECKADKLE 167
G +FCG HR+PE H C D K +ARE +AK KADK++
Sbjct: 129 GSTFCGTHRYPESHECQFDFKGVAREAIAKANPVVKADKVD 166
BLAST of Lag0019939 vs. ExPASy Swiss-Prot
Match:
Q852K6 (Zinc finger A20 and AN1 domain-containing stress-associated protein 7 OS=Oryza sativa subsp. japonica OX=39947 GN=SAP7 PE=2 SV=1)
HSP 1 Score: 105.5 bits (262), Expect = 5.9e-22
Identity = 60/160 (37.50%), Postives = 79/160 (49.38%), Query Frame = 0
Query: 13 APLCANNCGFYGNPKNHNLCSVCYAAFLRETGEDSRRRESSNDVIRSKNLISAELVETRD 72
A +C CGF+G+ +N+CS CY R + ND + +++L
Sbjct: 21 AAMCVTGCGFFGSEATNNMCSRCY-----------REHSADNDAVEEAAAANSDLELVGV 80
Query: 73 AEPNLGTRRSPAEAESSDTSESVADLKNPAPK---TKNRCKICKKKVGLLGFNCRCGGSF 132
AE R A + S S A + PA K NRC C+KKVGL GF CRCGG+F
Sbjct: 81 AETTTKKARMSAVVPVAVASSSSAAAEQPAAKAATAPNRCAACRKKVGLTGFKCRCGGNF 140
Query: 133 CGKHRHPEEHSCDVDHKVIAREILAKQMVECKADKLEFRV 170
CG HRH + H C D+K +E +AKQ ADKL R+
Sbjct: 141 CGGHRHADAHGCGFDYKSAGKEQIAKQNPLVVADKLATRI 169
BLAST of Lag0019939 vs. ExPASy Swiss-Prot
Match:
Q5JN07 (Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=SAP3 PE=2 SV=2)
HSP 1 Score: 104.4 bits (259), Expect = 1.3e-21
Identity = 57/156 (36.54%), Postives = 84/156 (53.85%), Query Frame = 0
Query: 15 LCANNCGFYGNPKNHNLCSVCYAAFLRETGEDSRRRESSNDVIRSKNLISAELVETRDAE 74
LCA+ CGFYGNP ++CSVCY G SS+ S ++ V +
Sbjct: 204 LCASGCGFYGNPATLDMCSVCYRQHCLLNGATMATGPSSSVAAASAATVATGAVTSDSCS 263
Query: 75 -PNLGTRRSPAEAESSDTSESVADLKNPAPKTKNRCKICKKKVGLLGFNCRCGGSFCGKH 134
P+ + ++++ +V + K PA NRC CKKKVGLLGF CRCG ++CG H
Sbjct: 264 VPSAEVNGAAFSSKNNPEPATVVEKKAPA----NRCASCKKKVGLLGFACRCGATYCGTH 323
Query: 135 RHPEEHSCDVDHKVIAREILAKQMVECKADKLEFRV 170
R+PE+H+C D K +R+ +A+ K +KL ++
Sbjct: 324 RYPEKHACGFDFKGASRDAIARANPLIKGEKLTNKI 355
BLAST of Lag0019939 vs. ExPASy Swiss-Prot
Match:
Q852K5 (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=SAP6 PE=2 SV=1)
HSP 1 Score: 101.7 bits (252), Expect = 8.5e-21
Identity = 64/161 (39.75%), Postives = 86/161 (53.42%), Query Frame = 0
Query: 12 DAP-LCANNCGFYGNPKNHNLCSVCYAAFLRETGEDSRRRESSNDVIRSKNLISAELVET 71
+AP LC NNCGF+G+ N+CS CY D +++K + A +VE
Sbjct: 19 EAPILCVNNCGFFGSRMTENMCSKCY-----------------RDTVKAKTV--ATVVEK 78
Query: 72 RDAEPNLGTRRSPAEAESSD-TSESVAD----LKNPAPK-TKNRCKICKKKVGLLGFNCR 131
+ P +P E +D S SVAD ++ PK NRC C+KKVGL GF CR
Sbjct: 79 K---PLASLSSTPLVTEVTDGGSGSVADGKQVMEEDTPKPPSNRCLSCRKKVGLTGFKCR 138
Query: 132 CGGSFCGKHRHPEEHSCDVDHKVIAREILAKQMVECKADKL 166
CGG+FC HR+ + H C D+K + RE +AKQ KADK+
Sbjct: 139 CGGTFCSMHRYADSHKCTFDYKQVGREQIAKQNPLVKADKI 157
BLAST of Lag0019939 vs. ExPASy Swiss-Prot
Match:
Q9SZ69 (Zinc finger A20 and AN1 domain-containing stress-associated protein 7 OS=Arabidopsis thaliana OX=3702 GN=SAP7 PE=1 SV=1)
HSP 1 Score: 101.7 bits (252), Expect = 8.5e-21
Identity = 59/172 (34.30%), Postives = 93/172 (54.07%), Query Frame = 0
Query: 5 GSSKNEN------DAPLCANNCGFYGNPKNHNLCSVCYAAFLRETGEDSRRRESSNDVIR 64
GS +N + + LC N CGF+G+P N NLCS CY + E + + + + + ++
Sbjct: 2 GSEENNSTSFPPTEPKLCDNGCGFFGSPSNMNLCSKCYRSLRAEEDQTAVAKAAVKNSLK 61
Query: 65 --SKNLISAELVETRDAEP-NLGTRRSPAEAESSDTSESVADLKNPAP-KTKNRCKICKK 124
S ++I+ + +P +L T AE S + + + P + NRC C K
Sbjct: 62 LPSCSIIAPGQKHPLEIKPAHLETVVVTAEPSSVPVAAEQDEAEPSRPVRPNNRCFSCNK 121
Query: 125 KVGLLGFNCRCGGSFCGKHRHPEEHSCDVDHKVIAREILAKQMVECKADKLE 167
KVG++GF C+CG +FCG HR+PE+H C D K + R+ +AK KADK++
Sbjct: 122 KVGVMGFKCKCGSTFCGSHRYPEKHECSFDFKEVGRDAIAKANPLVKADKVQ 173
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7014809.1 | 4.7e-61 | 71.60 | Zinc finger A20 and AN1 domain-containing stress-associated protein 10, partial ... | [more] |
XP_022141121.1 | 8.7e-55 | 68.02 | zinc finger A20 and AN1 domain-containing stress-associated protein 5-like [Momo... | [more] |
XP_038876927.1 | 8.1e-53 | 65.68 | zinc finger A20 and AN1 domain-containing stress-associated protein 10-like [Ben... | [more] |
KAG6576775.1 | 1.1e-46 | 68.79 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
XP_031739041.1 | 1.2e-43 | 58.24 | AN1-type zinc finger protein 6-like [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
Q6NNI8 | 1.4e-23 | 38.51 | Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Arabido... | [more] |
Q852K6 | 5.9e-22 | 37.50 | Zinc finger A20 and AN1 domain-containing stress-associated protein 7 OS=Oryza s... | [more] |
Q5JN07 | 1.3e-21 | 36.54 | Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Oryza s... | [more] |
Q852K5 | 8.5e-21 | 39.75 | Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Oryza s... | [more] |
Q9SZ69 | 8.5e-21 | 34.30 | Zinc finger A20 and AN1 domain-containing stress-associated protein 7 OS=Arabido... | [more] |