Sequences
The following sequences are available for this feature:
Legend: polypeptide exon CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGAGAAAGGCAAAATGGACATGGTACAAAGGGTTTACGTAGCCTTAAAAGTGAGGCTCTGTCTTGAGAGGTTGAAGGGACTGAAAGCTAGAAAGAAAAGCAGAATGGAAGAAAGAATATTAAAAAGGCTTCTGCTGAAAAGGAAAAGGAAAAGTGGCATCAGGCCTCGTCTCGTCTGCTGTGTTGCAG GCTCGCCTGCTTCTCTTTATCGCGCTTTTCTCTCTTCTCCTCTCCGGGGAAAACAGAGCGACAATGGGGGTCGTCGTCGATCAACAACCACCGTCGAAATTGCAGGAGAACCACCGGAAGCATCTGCCGCCCCCGCCCCCGCCGTCACGACACTCATTCAGTGCGCTCTTTGCGAGCAAGAGGAAGGTTCCAAACACTTCGGATCCACTCCATAA
ATGAAAGAGAAAGGCAAAATGGACATGGTACAAAGGGTTTACGTAGCCTTAAAAGTGAGGCTCTGTCTTGAGAGGTTGAAGGGACTGAAAGCTAGAAAGAAAAGCAGAATGGAAGAAAGAATATTAAAAAGGCTTCTGCTGAAAAGGAAAAGGAAAAGTGGCATCAGGCCTCGTCTCGTCTGCTGTGTTGCAGGCTCGCCTGCTTCTCTTTATCGCGCTTTTCTCTCTTCTCCTCTCCGGGGAAAACAGAGCGACAATGGGGGTCGTCGTCGATCAACAACCACCGTCGAAATTGCAGGAGAACCACCGGAAGCATCTGCCGCCCCCGCCCCCGCCGTCACGACACTCATTCAGTGCGCTCTTTGCGAGCAAGAGGAAGGTTCCAAACACTTCGGATCCACTCCATAA
ATGAAAGAGAAAGGCAAAATGGACATGGTACAAAGGGTTTACGTAGCCTTAAAAGTGAGGCTCTGTCTTGAGAGGTTGAAGGGACTGAAAGCTAGAAAGAAAAGCAGAATGGAAGAAAGAATATTAAAAAGGCTTCTGCTGAAAAGGAAAAGGAAAAGTGGCATCAGGCCTCGTCTCGTCTGCTGTGTTGCAGGCTCGCCTGCTTCTCTTTATCGCGCTTTTCTCTCTTCTCCTCTCCGGGGAAAACAGAGCGACAATGGGGGTCGTCGTCGATCAACAACCACCGTCGAAATTGCAGGAGAACCACCGGAAGCATCTGCCGCCCCCGCCCCCGCCGTCACGACACTCATTCAGTGCGCTCTTTGCGAGCAAGAGGAAGGTTCCAAACACTTCGGATCCACTCCATAA
MKEKGKMDMVQRVYVALKVRLCLERLKGLKARKKSRMEERILKRLLLKRKRKSGIRPRLVCCVAGSPASLYRAFLSSPLRGKQSDNGGRRRSTTTVEIAGEPPEASAAPAPAVTTLIQCALCEQEEGSKHFGSTP
Homology
BLAST of Lag0037004 vs. NCBI nr
Match:
KAG6608442.1 (Cyclin-A3-4, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 92.0 bits (227), Expect = 4.1e-15
Identity = 56/94 (59.57%), Postives = 63/94 (67.02%), Query Frame = 0
BLAST of Lag0037004 vs. NCBI nr
Match:
KAG6591407.1 (Cyclin-A3-4, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 86.3 bits (212), Expect = 2.2e-13
Identity = 66/133 (49.62%), Postives = 78/133 (58.65%), Query Frame = 0
BLAST of Lag0037004 vs. NCBI nr
Match:
KAG7037778.1 (hypothetical protein SDJN02_01409, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 82.0 bits (201), Expect = 4.2e-12
Identity = 47/71 (66.20%), Postives = 54/71 (76.06%), Query Frame = 0
The following BLAST results are available for this feature:
Match Name E-value Identity Description
KAG6608442.1 4.1e-15 59.57 Cyclin-A3-4, partial [Cucurbita argyrosperma subsp. sororia] [more] KAG6591407.1 2.2e-13 49.62 Cyclin-A3-4, partial [Cucurbita argyrosperma subsp. sororia] [more] KAG7037778.1 4.2e-12 66.20 hypothetical protein SDJN02_01409, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
A T G A A A G A G A A A G G C A A A A T G G A C A T G G T A C A A A G G G T T T A C G T A G C C T T A A A A G T G A G G C T C T G T C T T G A G A G G T T G A A G G G A C T G A A A G C T A G A A A G A A A A G C A G A A T G G A A G A A A G A A T A T T A A A A A G G C T T C T G C T G A A A A G G A A A A G G A A A A G T G G C A T C A G G C C T C G T C T C G T C T G C T G T G T T G C A G G C T C G C C T G C T T C T C T T T A T C G C G C T T T T C T C T C T T C T C C T C T C C G G G G A A A A C A G A G C G A C A A T G G G G G T C G T C G T C G A T C A A C A A C C A C C G T C G A A A T T G C A G G A G A A C C A C C G G A A G C A T C T G C C G C C C C C G C C C C C G C C G T C A C G A C A C T C A T T C A G T G C G C T C T T T G C G A G C A A G A G G A A G G T T C C A A A C A C T T C G G A T C C A C T C C A T A A 50 100 150 200 250 300 350 400 Score = Score = Sequence mobidb-lite mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 78..110 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 79..93
Relationships
The following mRNA feature(s) are a part of this gene:
