Sed0019166 (gene) Chayote v1

Overview


Name	Sed0019166
Type	gene
Organism	Sechium edule (Chayote v1)
Description	F-box domain-containing protein
Location	LG06: 45053647 .. 45055609 (-)
RNA-Seq Expression	Sed0019166
Synteny	Sed0019166

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAGAAAAGGGGTTTGGAACCCTAAACCGTACATAAACCATTCTTCTCCTTCGATTTTGATTCAATTGCAGCGATGAAGAAGAAACCTAAGGGAAAAAAAAAGTGTTAGAAGCATAAATTCAGAGCTTCCATCTTCAATCATGGAGGTAATCTTCTCGAAACTCCCCTTCTACACTTTGCCGAGTTGCAGAATTGTCTGTAAAGAATGGAACGATCTGATTCTAACCCCTAAGTTCGATCCTCAAATCTCGATTTCCAATCGATTATTTGCTTATATTAATCCTCGTGGTAATCTCGATTGTTTGGATTTCGATTCTAAACATTTAGTGAAAAGGTCCAACTTTCATAAATTGTTCCCTGAAAATAGAATTGTCACGGTTCTTAGTTCTTGCCATGAATTGCTATTTCTTCTTATCAAGAAATATAGCAATCATTACTGTGCATGCATATTAAATCCCCTGACAAATGAATTTGTTATGCCCCGGATCTCGAAAGCGGATAGGTTCAATTACTATTTTTACGGATTGGGATTTAGTCCTAGAACAAAGCGATATAAAGTAGTACGAATCTCTAGGATATTAGATGATTCCGTTACCATGATAGAGATTTTTGCATTTGGCACATCGAGTGAATGGACCCGTGTTACATCTGTGAGAAGAGGAGTCTATTTCAGGAAATATGCTTATTTTAATGGAGAGCTCTATTTTCTTGGAAGCTATAGAAATGGAGATTGTGTCATTTTTTGCTTGGATGTAGAGGAGGAAAGAATCAGAAAAATTCCAACTCCCCAAGTTAAGGAGAAGTTTTGTCGTATTGGAAATGTTGGTGGCACTCTCTATCTAAGTACCTCTCATGATCCTCCTTTCCATGTGTGGAAGATGATAGAAGATTCTTCGTGGATTAAAGTATTTGATTGTTCTGTACCTAACTTAAAACTCATCCAAATTTGTGAAGATGGAAAGATCTTGTTTGTCGTTAATAGACTTTATTTTGCATTTTACGACCCCACGTCTGCGTTGATCGAGGTATTGGGAGATCTAGATATTCAAAGTATGGAAATGTTCGGTGTTCATCAGATTGGCTCCTTCAATAATTTTAGTTCTATCCACAAAATTTTGGCTGGAAATGGTTGAAAGATTGGTTTTATTTTATTTTTTTTGTTTGTTGTATATCTTATTTTAGATAGGTAGGAAGATTCTTTTTTGGGTGAGAAATTTATGTATTATGTATTTATTTATGTTAGATCAAGTATGTTACATAGAATATTACAAAGATCAATATCAGCAATAATACTTCTAGTTTAACTTCTACATATGAATCATTTTCTGTGTCAATTTTATTTCTTAGTGAAGATGTGTCTAAACCATTTTCTATTATTTACCTGACTCTTTATTGACACTAAACCAACTGCCAGAGTAGTTTCCATCTTAATGTTTATTGACACTAAATCATTTAATAGCTCCTAATAGAAATCAAAATTCATGTGTTCATATTATAAGCCACACATATGCTCATCAAATCTATAGGAAGTCTAGAAGTCGAACCGAGTTTTCGATACAATTCTATATTCAATTTTGCACAAGAAATGCTCAACATTTACAGAATTATAGTAAAGAAAACCAGGACTAAATGAGGTTAAAGAGCTAACATAAGAAAATTTGGGGTATTCATTATACAGAGGAAAATACTTGGTGAAAAATTTATGTACACCTAAACTTTTGCTACTTAAGTTTGTCTCATTCCTTTGAAGTTATGTAAGGGGGAGACAGTCTTCGTTTGGACCATCAATTAACCTAAATCTAAGTCGTTATTTCAAACTAATGTCTTTATTTGATATTAATCCTTTCTTCTTCTATGTTATAATAACCTGCACTTAAACAATGTTTATCATAACGCTTAACATACATTTCAAATATAGTTTATAATAACTCATTGGTGAAATATCCTATGTCTCAAACCCGAC

mRNA sequence

TGAGAAAAGGGGTTTGGAACCCTAAACCGTACATAAACCATTCTTCTCCTTCGATTTTGATTCAATTGCAGCGATGAAGAAGAAACCTAAGGGAAAAAAAAAGTGTTAGAAGCATAAATTCAGAGCTTCCATCTTCAATCATGGAGGTAATCTTCTCGAAACTCCCCTTCTACACTTTGCCGAGTTGCAGAATTGTCTGTAAAGAATGGAACGATCTGATTCTAACCCCTAAGTTCGATCCTCAAATCTCGATTTCCAATCGATTATTTGCTTATATTAATCCTCGTGGTAATCTCGATTGTTTGGATTTCGATTCTAAACATTTAGTGAAAAGGTCCAACTTTCATAAATTGTTCCCTGAAAATAGAATTGTCACGGTTCTTAGTTCTTGCCATGAATTGCTATTTCTTCTTATCAAGAAATATAGCAATCATTACTGTGCATGCATATTAAATCCCCTGACAAATGAATTTGTTATGCCCCGGATCTCGAAAGCGGATAGGTTCAATTACTATTTTTACGGATTGGGATTTAGTCCTAGAACAAAGCGATATAAAGTAGTACGAATCTCTAGGATATTAGATGATTCCGTTACCATGATAGAGATTTTTGCATTTGGCACATCGAGTGAATGGACCCGTGTTACATCTGTGAGAAGAGGAGTCTATTTCAGGAAATATGCTTATTTTAATGGAGAGCTCTATTTTCTTGGAAGCTATAGAAATGGAGATTGTGTCATTTTTTGCTTGGATGTAGAGGAGGAAAGAATCAGAAAAATTCCAACTCCCCAAGTTAAGGAGAAGTTTTGTCGTATTGGAAATGTTGGTGGCACTCTCTATCTAAGTACCTCTCATGATCCTCCTTTCCATGTGTGGAAGATGATAGAAGATTCTTCGTGGATTAAAGTATTTGATTGTTCTGTACCTAACTTAAAACTCATCCAAATTTGTGAAGATGGAAAGATCTTGTTTGTCGTTAATAGACTTTATTTTGCATTTTACGACCCCACGTCTGCGTTGATCGAGGTATTGGGAGATCTAGATATTCAAAGTATGGAAATGTTCGGTGTTCATCAGATTGGCTCCTTCAATAATTTTAGTTCTATCCACAAAATTTTGGCTGGAAATGGTTGAAAGATTGGTTTTATTTTATTTTTTTTGTTTGTTGTATATCTTATTTTAGATAGGTAGGAAGATTCTTTTTTGGGTGAGAAATTTATGTATTATGTATTTATTTATGTTAGATCAAGTATGTTACATAGAATATTACAAAGATCAATATCAGCAATAATACTTCTAGTTTAACTTCTACATATGAATCATTTTCTGTGTCAATTTTATTTCTTAGTGAAGATGTGTCTAAACCATTTTCTATTATTTACCTGACTCTTTATTGACACTAAACCAACTGCCAGAGTAGTTTCCATCTTAATGTTTATTGACACTAAATCATTTAATAGCTCCTAATAGAAATCAAAATTCATGTGTTCATATTATAAGCCACACATATGCTCATCAAATCTATAGGAAGTCTAGAAGTCGAACCGAGTTTTCGATACAATTCTATATTCAATTTTGCACAAGAAATGCTCAACATTTACAGAATTATAGTAAAGAAAACCAGGACTAAATGAGGTTAAAGAGCTAACATAAGAAAATTTGGGGTATTCATTATACAGAGGAAAATACTTGGTGAAAAATTTATGTACACCTAAACTTTTGCTACTTAAGTTTGTCTCATTCCTTTGAAGTTATGTAAGGGGGAGACAGTCTTCGTTTGGACCATCAATTAACCTAAATCTAAGTCGTTATTTCAAACTAATGTCTTTATTTGATATTAATCCTTTCTTCTTCTATGTTATAATAACCTGCACTTAAACAATGTTTATCATAACGCTTAACATACATTTCAAATATAGTTTATAATAACTCATTGGTGAAATATCCTATGTCTCAAACCCGAC

Coding sequence (CDS)

ATGGAGGTAATCTTCTCGAAACTCCCCTTCTACACTTTGCCGAGTTGCAGAATTGTCTGTAAAGAATGGAACGATCTGATTCTAACCCCTAAGTTCGATCCTCAAATCTCGATTTCCAATCGATTATTTGCTTATATTAATCCTCGTGGTAATCTCGATTGTTTGGATTTCGATTCTAAACATTTAGTGAAAAGGTCCAACTTTCATAAATTGTTCCCTGAAAATAGAATTGTCACGGTTCTTAGTTCTTGCCATGAATTGCTATTTCTTCTTATCAAGAAATATAGCAATCATTACTGTGCATGCATATTAAATCCCCTGACAAATGAATTTGTTATGCCCCGGATCTCGAAAGCGGATAGGTTCAATTACTATTTTTACGGATTGGGATTTAGTCCTAGAACAAAGCGATATAAAGTAGTACGAATCTCTAGGATATTAGATGATTCCGTTACCATGATAGAGATTTTTGCATTTGGCACATCGAGTGAATGGACCCGTGTTACATCTGTGAGAAGAGGAGTCTATTTCAGGAAATATGCTTATTTTAATGGAGAGCTCTATTTTCTTGGAAGCTATAGAAATGGAGATTGTGTCATTTTTTGCTTGGATGTAGAGGAGGAAAGAATCAGAAAAATTCCAACTCCCCAAGTTAAGGAGAAGTTTTGTCGTATTGGAAATGTTGGTGGCACTCTCTATCTAAGTACCTCTCATGATCCTCCTTTCCATGTGTGGAAGATGATAGAAGATTCTTCGTGGATTAAAGTATTTGATTGTTCTGTACCTAACTTAAAACTCATCCAAATTTGTGAAGATGGAAAGATCTTGTTTGTCGTTAATAGACTTTATTTTGCATTTTACGACCCCACGTCTGCGTTGATCGAGGTATTGGGAGATCTAGATATTCAAAGTATGGAAATGTTCGGTGTTCATCAGATTGGCTCCTTCAATAATTTTAGTTCTATCCACAAAATTTTGGCTGGAAATGGTTGA

Protein sequence

MEVIFSKLPFYTLPSCRIVCKEWNDLILTPKFDPQISISNRLFAYINPRGNLDCLDFDSKHLVKRSNFHKLFPENRIVTVLSSCHELLFLLIKKYSNHYCACILNPLTNEFVMPRISKADRFNYYFYGLGFSPRTKRYKVVRISRILDDSVTMIEIFAFGTSSEWTRVTSVRRGVYFRKYAYFNGELYFLGSYRNGDCVIFCLDVEEERIRKIPTPQVKEKFCRIGNVGGTLYLSTSHDPPFHVWKMIEDSSWIKVFDCSVPNLKLIQICEDGKILFVVNRLYFAFYDPTSALIEVLGDLDIQSMEMFGVHQIGSFNNFSSIHKILAGNG

Homology

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BLAST of Sed0019166 vs. NCBI nr
Match: XP_038883771.1 (putative F-box protein At1g60370 [Benincasa hispida])

HSP 1 Score: 243.4 bits (620), Expect = 2.7e-60
Identity = 147/362 (40.61%), Postives = 204/362 (56.35%), Query Frame = 0


Query: 1   MEVIFSKLPFYTLPSCRIVCKEWNDLILTPKFDPQISISNRLFAYINPRGNLDCLDFDSK 60
           ++VI SK+P + LPSCR+VCK WN+L+LT KFDP + IS+   AY  P  NL C+DF+ K
Sbjct: 23  IQVILSKVPLFNLPSCRLVCKAWNNLVLTCKFDPPLLISSLSLAYDCPSRNLYCMDFNLK 82

Query: 61  HLVKRSN-----FHKLFPENRIVTVLSSCHELLFLLIKKYSN----HYCACILNPLTNEF 120
           +L   S+     FH  F  + I ++++SC+ LL LLI K  +     Y  CILNP+TNE+
Sbjct: 83  YLEGMSSVVSFTFHPKFFTSSI-SIINSCNGLLSLLISKRKSGSPISYVLCILNPMTNEY 142

Query: 121 VMPRISKADRF----NYYFYGLGFSPRTKRYKVVRISRILDDSVTMIEIFAFGTSSEWTR 180
                 K+         Y YGLGFSP TK+YK+ R S + D+S T +EIFAFGT+ EWT 
Sbjct: 143 FKFPAEKSKTHCCCGRPYSYGLGFSPETKQYKIARTSFLRDESTTSVEIFAFGTTREWTP 202

Query: 181 VTSVRRGVYFRKYAYFNGELYFLGSY---RNGDCVIFCLDVEEERIRKIPTPQVKEKFCR 240
           V  +   V      YFNG LY+       R+ +  I+ LD+E E++ KI  P        
Sbjct: 203 VGVLPSLVVEDHGVYFNGGLYWTVDELQPRDSNNAIYRLDIENEKLEKISCPHYGGGHFF 262

Query: 241 IGNVGGTLYLST---SHDPPFHVWKMIEDSSWIKVFDCSVP---------------NLKL 300
            G   GTLYL+T   + D  + VWKM E+ SWIK F  S P                L+ 
Sbjct: 263 FGVFDGTLYLTTYTGTVDNIYQVWKMEENLSWIKAFVLSRPENLRHPEHDQPWGVSQLQP 322

Query: 301 IQICEDGKILFVVNRLYFAFYDPTSALIEVLGDLDIQSMEMFGVHQIGSFNNFSSIHKIL 329
           I++CEDGKIL ++       YDP +  +++L + D+++     VHQI S +NF+S+  IL
Sbjct: 323 IKVCEDGKILCLLAGFLLILYDPKTKRVKILTNQDVETERHLHVHQIDS-SNFNSLPNIL 382

[Close]

BLAST of Sed0019166 vs. NCBI nr
Match: XP_038880514.1 (putative F-box protein At1g46984 [Benincasa hispida])

HSP 1 Score: 241.9 bits (616), Expect = 7.8e-60
Identity = 152/365 (41.64%), Postives = 205/365 (56.16%), Query Frame = 0


Query: 1   MEVIFSKLPFYTLPSCRIVCKEWNDLILTPKFDPQISISNRLFA--YINPRGNLDCLDFD 60
           +++IFSKLPF+ LP+CR+V   WN+L+L+ KFDP ISISN  FA  Y     NL C+D D
Sbjct: 21  LQLIFSKLPFFNLPTCRLVSATWNNLVLSCKFDPSISISNLFFAHFYSCRDRNLHCVDLD 80

Query: 61  SKHL-----VKRSNFHKLFPENRI-VTVLSSCHELLFLLIKKYSNH----YCACILNPLT 120
            +HL     V    FH         +++++SC  L+ LLI K           C+LNP+T
Sbjct: 81  PQHLEGMSTVASFTFHPNVSSGSCKISIINSCSGLISLLITKRRRRGHRPGVVCVLNPMT 140

Query: 121 NE-FVMPRI-SKADRFNYYFYGLGFSPRTKRYKVVRISRILDDSVTMIEIFAFGTSSEWT 180
           NE F +P   SK D    YFYGLGFSPRTK+YK+ R   +  + +  +EIFAFGTS EWT
Sbjct: 141 NEYFKLPTFRSKGDSVKDYFYGLGFSPRTKQYKLARTHYVCHEFI--VEIFAFGTSCEWT 200

Query: 181 RVTSVRRGVYFRKYAYFNGELYFLGSYRNGDC----VIFCLDVEEERIRKIPTP---QVK 240
            V SV   +      YFNG LY++G  +  +     VI+ LD+E+++ ++I  P     +
Sbjct: 201 PVGSVPYFLNEYHGVYFNGGLYWVGGQQLPNAGLSDVIYRLDLEDDKFKQISFPLDGDDE 260

Query: 241 EKFCRIGNVGGTLYLS-TSHDPPFHVWKMIEDSSWIKVFDCSVPN--------------- 300
             F  IG    TLYL+    D  +HVWKM ED SWIK F  ++P                
Sbjct: 261 GDFPYIGVYNDTLYLTLCCGDFEYHVWKMEEDFSWIKEFVLALPENVHHSLPRHHPIGYC 320

Query: 301 LKLIQICEDGKILFVVNRLYFAFYDPTSALIEVLGDLDIQSMEMFGVHQIGSFNNFSSIH 329
           L+LI+ CEDG IL +   LY   YDP +   E+L D D +  +   V+QI SF NF+S+H
Sbjct: 321 LQLIKACEDGNILCLCAGLYLILYDPKTETTELLTDQDFEIKKHMWVYQIDSF-NFNSLH 380

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BLAST of Sed0019166 vs. NCBI nr
Match: XP_004135796.1 (putative F-box protein At1g46984 [Cucumis sativus] >KGN66126.1 hypothetical protein Csa_007182 [Cucumis sativus])

HSP 1 Score: 231.1 bits (588), Expect = 1.4e-56
Identity = 147/364 (40.38%), Postives = 202/364 (55.49%), Query Frame = 0


Query: 1   MEVIFSKLPFYTLPSCRIVCKEWNDLILTPKFDPQISISNRLFA--YINPRGNLDCLDFD 60
           +++IFSKLPF+ LP+CR+V   WN+LI + KFDP ISIS+  FA  Y +   NL C++FD
Sbjct: 21  LQLIFSKLPFFNLPTCRLVSTTWNNLISSCKFDPSISISHLFFARFYSSRHPNLHCVEFD 80

Query: 61  SKHLVKRSN-----FH-KLFPENRIVTVLSSCHELLFLLIKKYSNH----YCACILNPLT 120
            +H    S      FH  L   +  +T+++SC  L+ L+I K           C+LNP+T
Sbjct: 81  PQHAEGMSTVASFAFHPDLSSGSCRITIINSCSGLISLIINKRRRRGHRLDLVCVLNPIT 140

Query: 121 NE-FVMPRI-SKADRFNYYFYGLGFSPRTKRYKVVRISRILDDSVTMIEIFAFGTSSEWT 180
           NE F +P   SK DR   Y YGLGFSP T +YK+ R     D+ +  ++IFAFGTS EWT
Sbjct: 141 NEYFKLPTSRSKGDRVPNYCYGLGFSPTTNQYKLARTHFTHDEFI--VDIFAFGTSCEWT 200

Query: 181 RVTSVRRGVYFRKYAYFNGELYFLGSYR--NGDC-----VIFCLDVEEERIRKIPTPQVK 240
            V SV   +      Y NG LY++GS +  NG       VI+ LD+++E+  KI  P   
Sbjct: 201 PVGSVPNFLNEYHGVYLNGGLYWVGSQKLPNGGISDYTEVIYRLDLKDEKFEKISFPLDG 260

Query: 241 EKFCRIGNVGGTLYLS-TSHDPPFHVWKMIEDSSWIKVFDCSVPN--------------L 300
                I    GTLYL+    D  +H WKM ED SW K F  ++P               L
Sbjct: 261 GDDPYIAVYNGTLYLTFCCEDFDYHAWKMEEDFSWSKEFVLALPENVHHSLRHHPIGYYL 320

Query: 301 KLIQICEDGKILFVVNRLYFAFYDPTSALIEVLGDLDIQSMEMFGVHQIGSFNNFSSIHK 329
           +LI+ CEDG IL +   +    YDP++  +E+L + D +  E   VHQI SF +F+S+H 
Sbjct: 321 QLIKFCEDGNILCLYAGILLILYDPSTQTVEILTNQDFEIKEAMWVHQIESF-SFNSLHN 380

[Close]

BLAST of Sed0019166 vs. NCBI nr
Match: XP_022143297.1 (F-box/kelch-repeat protein At3g06240-like [Momordica charantia])

HSP 1 Score: 225.3 bits (573), Expect = 7.6e-55
Identity = 141/361 (39.06%), Postives = 205/361 (56.79%), Query Frame = 0


Query: 3   VIFSKLPFYTLPSCRIVCKEWNDLILTPKFDPQISISNRLFA----YINPRGNLDCLDFD 62
           +IFSKLPF  LPSCR+VCK W+D++LT K  P ISISN LF       +P  NL CL  D
Sbjct: 24  LIFSKLPFVNLPSCRLVCKAWSDVVLTGKLHPSISISNHLFLAHDYLFDP--NLQCLHLD 83

Query: 63  SKHL-----VKRSNFHKLFP-ENRIVTVLSSCHELLFLLIKKYS------NHYCACILNP 122
            K+L     V +  FH  F   +  +++++ C+ LL    +  +       +   CILNP
Sbjct: 84  PKYLGGMCNVAKFRFHPDFVLSSTYISIVNFCNGLLCCKFEHRTTKMPPYENVEVCILNP 143

Query: 123 LTNEFVMPRISKA--DRFNYYFYGLGFSPRTKRYKVVRISRILDDSVTMIEIFAFGTSSE 182
           +TNE+  P IS A  DR+ YY Y  GFSP+TK+YK+VR     D +  ++E F FGT+ +
Sbjct: 144 MTNEYFKPPISNASKDRW-YYCYRFGFSPKTKQYKLVRFFYSCDKAAILLETFTFGTNCK 203

Query: 183 WTRVTSVRRGVYFRKYA-YFNGELYFLG-SYRNGDCVIFCLDVEEERIRKIPTPQVKEKF 242
            T V+ V   +   +++ YFNG LY++G   ++   V++ LD+E+E +++I  PQ     
Sbjct: 204 STYVSCVPSSMSMEEHSVYFNGSLYWIGKQLKHPTNVLYRLDIEKEELQEISFPQ-SGGC 263

Query: 243 CRIGNVGGTLYLSTSHD--PPFHVWKMIEDSSWIKVFDCSVP------------NLKLIQ 302
           C IG   G+LYL+ +      +HVWKM ED SW K FD  +P             L+LI+
Sbjct: 264 CSIGVFNGSLYLTLAQGRYHAYHVWKMEEDFSWTKAFDVLLPKIYVHHRRLYDSQLQLIR 323

Query: 303 ICEDGKILFVVNRLYFAFYDPTSALIEVLGDLDIQSMEMFGVHQIGSFNNFSSIHKILAG 330
            C+DGKIL +++ L    Y+  +  +E    L  Q + +  VH+I SF NF S+HKIL G
Sbjct: 324 ACDDGKILCLISGLDLILYNSKTQRME---SLTYQHLNIKKVHRIDSF-NFDSLHKILTG 376

[Close]

BLAST of Sed0019166 vs. NCBI nr
Match: XP_008450717.1 (PREDICTED: putative F-box protein At3g21120 [Cucumis melo] >TYK10199.1 putative F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 221.9 bits (564), Expect = 8.4e-54
Identity = 139/366 (37.98%), Postives = 202/366 (55.19%), Query Frame = 0


Query: 1   MEVIFSKLPFYTLPSCRIVCKEWNDLILTPKFDPQISISNRLFA--YINPRGNLDCLDFD 60
           ++ IFSK+PF+ LP+CR+V + WN+LI + KFDP  SI +  FA  Y +   NL C++FD
Sbjct: 20  LQQIFSKIPFFNLPTCRLVSRTWNNLISSCKFDPSTSIYHLFFARFYSSRHRNLHCVEFD 79

Query: 61  SKH-----LVKRSNFHKLF-PENRIVTVLSSCHELLFLLIKKY----SNHYCACILNPLT 120
            +H     +V    FH  F   +  +T+++SC  L+ LLI K           C+LNP+T
Sbjct: 80  PQHVEGMSIVASFAFHPDFCSASSRITIINSCSGLISLLITKRRRRGQRRDVVCVLNPIT 139

Query: 121 NE-FVMPRIS-KADRFNYYFYGLGFSPRTKRYKVVRISRILDDSVTMIEIFAFGTSSEWT 180
           NE F  P +  K D+   Y YGLGFSP+T +YK+ R     ++ +  ++IFAFGTS EWT
Sbjct: 140 NEYFKHPNLRLKGDKVPNYCYGLGFSPKTNQYKLARTHFAHNEFI--VDIFAFGTSCEWT 199

Query: 181 RVTSVRRGVYFRKYAYFNGELYFLGSYR---NGDC-----VIFCLDVEEERIRKIPTPQV 240
            + SV   +      YFNG LY++GS +   NG       V++ LD+ +E+ +KI  P  
Sbjct: 200 PIGSVPNFLNEYHGVYFNGGLYWVGSQKQLPNGGLSDYTGVVYRLDLNDEKFKKISIPFG 259

Query: 241 KEKFCRIGNVGGTLYLS-TSHDPPFHVWKMIEDSSWIKVFDCSVPN-------------- 300
            ++   +G   GTLYL+    D  +HVWKM ED SW K F  ++P               
Sbjct: 260 GDE-PYVGVYNGTLYLTLCCEDFDYHVWKMKEDFSWSKEFVLALPENILHSLHRHHPIGY 319

Query: 301 -LKLIQICEDGKILFVVNRLYFAFYDPTSALIEVLGDLDIQSMEMFGVHQIGSFNNFSSI 329
            L+L++ CEDG IL +   +    YDP +  +E+L D D +  E    HQI SF +F+S+
Sbjct: 320 YLQLVKFCEDGSILCLCAGILLIVYDPKTQQMEILTDQDFEIKEGMWFHQIESF-SFNSL 379

[Close]

BLAST of Sed0019166 vs. ExPASy Swiss-Prot
Match: Q9SAB5 (Putative F-box/LRR-repeat/kelch-repeat protein At1g11620 OS=Arabidopsis thaliana OX=3702 GN=At1g11620 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 1.2e-05
Identity = 72/301 (23.92%), Postives = 119/301 (39.53%), Query Frame = 0


Query: 1   MEVIFSKLPFYTLPSCRIVCKEWNDLILTPKFDPQISISNRLFAYINPRGNLDCLDFDSK 60
           +E I S++P  +L   R  CK+W  LI  P+F       N+  +++  R     + F+++
Sbjct: 11  VEEILSRVPARSLVRLRSTCKQWEALIAEPRF------VNKHLSHMRYREQQFTV-FNNE 70

Query: 61  HLVK----------RSNFHKLFPENRIVTV-----------LSSCHELLFLLIKKYSNHY 120
           H+V             +F+K  PEN  V +           +S C  LL  + K      
Sbjct: 71  HIVSPLFGSTTSYVGIDFNK--PENCGVKLPFPIALSPAINISHCDGLLLYVTKS----- 130

Query: 121 CACILNPLTNEFVMPRISKADRFNYYFYGLGF----SPRTKRYKVVRISRILDDSVTMIE 180
              + NPL ++    + S+    +   YGLG+    S     YKVVR    + +S + +E
Sbjct: 131 MLLVANPLLSQKRWIKCSEGFDHSMDAYGLGYLFNQSSGFYDYKVVRFRCGIKNS-SRVE 190

Query: 181 IFAFGTSSEWTRVTSVRRGVYF---RKYAYFNGELYFLGSYRNGD--CVIFCLDVEEERI 240
           ++AF  S  W  V     G +           G  Y+LG  ++G+    I   D  +ER 
Sbjct: 191 VYAF-KSDSWKVVVDTNFGGFDGLPLSSVCLRGTPYWLGYNKSGNELMSIQSFDFSKERF 250

Query: 241 RKIPTPQVK------EKFCRIGNVGG---TLYLSTSHDPPFHVWKMIEDSSWIKVFDCSV 263
             +  P          K+  +G   G   +L L        H+W M +   W ++    V
Sbjct: 251 EPLFLPPQSIGSRNLVKYISLGIFRGDQLSLLLECHETCKLHLWVM-KKQHWSRLMTVDV 294

[Close]

BLAST of Sed0019166 vs. ExPASy Swiss-Prot
Match: Q9FIH1 (F-box protein At5g42460 OS=Arabidopsis thaliana OX=3702 GN=At5g42460 PE=2 SV=2)

HSP 1 Score: 47.0 bits (110), Expect = 4.8e-04
Identity = 57/252 (22.62%), Postives = 99/252 (39.29%), Query Frame = 0


Query: 4   IFSKLPFYTLPSCRIVCKEWNDL-----------ILTPK------------------FDP 63
           I S++P  +L + R+ CK+WNDL           + T K                  +  
Sbjct: 15  ILSRVPLTSLRAVRLTCKKWNDLSKDRSFLKKQIVETKKKQLESKEIEVIMMRNFRVYLT 74

Query: 64  QISISNRLFAYINPRGNLDCLDFDSKHLVKRSNFHKLFPENRIVTVLSSCHELLFLLIKK 123
            I I N +     P+G L  L  D+ H       H++   +R+      C  LL  + K 
Sbjct: 75  SIDIHNNVDPSFTPKGTLISLSDDANH-------HQVDNVSRVF----HCDGLLLCITKD 134

Query: 124 YSNHYCACILNPLTNE--FVMPRISKADRFNYYFYGLGFSPRTKRYKVVRIS---RILDD 183
              HY   + NP   +  ++ PR S   + N   Y LG+  + K +K++R+        +
Sbjct: 135 L--HYRLVVWNPYFGQTRWIQPRNSYHRKDN---YALGYDEK-KNHKILRLKDNYYAPRE 194

Query: 184 SVTMIEIFAFGTSSEWTRVTSVRRGVYFRKY---AYFNGELYFLGSYRNGDC-VIFCLDV 217
            +   E+++F  S+ W  V  V    Y   Y       G  Y+  + ++ +   + C D 
Sbjct: 195 RICEFELYSF-ESNSWKVVLDVSPDWYIPSYNRGLSLKGNTYWYATEKHVNVDFLICFDF 248

[Close]

BLAST of Sed0019166 vs. ExPASy Swiss-Prot
Match: Q9ZNQ3 (F-box/LRR-repeat/kelch-repeat protein At2g27520 OS=Arabidopsis thaliana OX=3702 GN=At2g27520 PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 6.3e-04
Identity = 58/224 (25.89%), Postives = 88/224 (39.29%), Query Frame = 0


Query: 1   MEVIFSKLPFYTLPSCRIVCKEWNDLILTPKFDPQISISNRLFAYINPRGNLD-CLDFDS 60
           ++ I S+LP  +L   R  CK WN L   P+F         +    +     D  L   +
Sbjct: 11  VDEILSRLPATSLGRLRFTCKRWNALFKDPEF---------ITKQFHKAAKQDLVLMLSN 70

Query: 61  KHLVKRSNFHKLFPENRIVTVLSSCHELLFLLIKKYSNHYCACILNPLTNE--FVMPRIS 120
             +   S   K  P N  +  +  C+ LL L   +  N     ++NP T +  ++ PR  
Sbjct: 71  FGVYSMSTNLKEIPNNIEIAQVFHCNGLL-LCSTEEGNKTKLVVVNPCTGQTRWIEPRTD 130

Query: 121 KADRFNY---YFYGLGFSPRTKRYKVVRISRILDDSVTMIEIFAFGTSSEWTRVTSVRRG 180
               +NY      G G +   K Y   +I RI      ++EIF    S+ W  ++ V   
Sbjct: 131 ----YNYNHDIALGYGNNSTKKSYDSYKILRI-TYGCKLVEIFEL-KSNSWRVLSKVHPN 190

Query: 181 VYFRKY--AYFNGELYFLGSYRNGDCVIFCLDVEEERIRKIPTP 217
           V    Y    F G  Y+L SY   + + F  D   E  R +P P
Sbjct: 191 VEKHYYGGVSFKGNTYWL-SYTKFNILSF--DFTTETFRSVPLP 215

[Close]

BLAST of Sed0019166 vs. ExPASy TrEMBL
Match: A0A0A0M1M5 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G572960 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 6.7e-57
Identity = 147/364 (40.38%), Postives = 202/364 (55.49%), Query Frame = 0


Query: 1   MEVIFSKLPFYTLPSCRIVCKEWNDLILTPKFDPQISISNRLFA--YINPRGNLDCLDFD 60
           +++IFSKLPF+ LP+CR+V   WN+LI + KFDP ISIS+  FA  Y +   NL C++FD
Sbjct: 21  LQLIFSKLPFFNLPTCRLVSTTWNNLISSCKFDPSISISHLFFARFYSSRHPNLHCVEFD 80

Query: 61  SKHLVKRSN-----FH-KLFPENRIVTVLSSCHELLFLLIKKYSNH----YCACILNPLT 120
            +H    S      FH  L   +  +T+++SC  L+ L+I K           C+LNP+T
Sbjct: 81  PQHAEGMSTVASFAFHPDLSSGSCRITIINSCSGLISLIINKRRRRGHRLDLVCVLNPIT 140

Query: 121 NE-FVMPRI-SKADRFNYYFYGLGFSPRTKRYKVVRISRILDDSVTMIEIFAFGTSSEWT 180
           NE F +P   SK DR   Y YGLGFSP T +YK+ R     D+ +  ++IFAFGTS EWT
Sbjct: 141 NEYFKLPTSRSKGDRVPNYCYGLGFSPTTNQYKLARTHFTHDEFI--VDIFAFGTSCEWT 200

Query: 181 RVTSVRRGVYFRKYAYFNGELYFLGSYR--NGDC-----VIFCLDVEEERIRKIPTPQVK 240
            V SV   +      Y NG LY++GS +  NG       VI+ LD+++E+  KI  P   
Sbjct: 201 PVGSVPNFLNEYHGVYLNGGLYWVGSQKLPNGGISDYTEVIYRLDLKDEKFEKISFPLDG 260

Query: 241 EKFCRIGNVGGTLYLS-TSHDPPFHVWKMIEDSSWIKVFDCSVPN--------------L 300
                I    GTLYL+    D  +H WKM ED SW K F  ++P               L
Sbjct: 261 GDDPYIAVYNGTLYLTFCCEDFDYHAWKMEEDFSWSKEFVLALPENVHHSLRHHPIGYYL 320

Query: 301 KLIQICEDGKILFVVNRLYFAFYDPTSALIEVLGDLDIQSMEMFGVHQIGSFNNFSSIHK 329
           +LI+ CEDG IL +   +    YDP++  +E+L + D +  E   VHQI SF +F+S+H 
Sbjct: 321 QLIKFCEDGNILCLYAGILLILYDPSTQTVEILTNQDFEIKEAMWVHQIESF-SFNSLHN 380

[Close]

BLAST of Sed0019166 vs. ExPASy TrEMBL
Match: A0A6J1CQE2 (F-box/kelch-repeat protein At3g06240-like OS=Momordica charantia OX=3673 GN=LOC111013202 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 3.7e-55
Identity = 141/361 (39.06%), Postives = 205/361 (56.79%), Query Frame = 0


Query: 3   VIFSKLPFYTLPSCRIVCKEWNDLILTPKFDPQISISNRLFA----YINPRGNLDCLDFD 62
           +IFSKLPF  LPSCR+VCK W+D++LT K  P ISISN LF       +P  NL CL  D
Sbjct: 24  LIFSKLPFVNLPSCRLVCKAWSDVVLTGKLHPSISISNHLFLAHDYLFDP--NLQCLHLD 83

Query: 63  SKHL-----VKRSNFHKLFP-ENRIVTVLSSCHELLFLLIKKYS------NHYCACILNP 122
            K+L     V +  FH  F   +  +++++ C+ LL    +  +       +   CILNP
Sbjct: 84  PKYLGGMCNVAKFRFHPDFVLSSTYISIVNFCNGLLCCKFEHRTTKMPPYENVEVCILNP 143

Query: 123 LTNEFVMPRISKA--DRFNYYFYGLGFSPRTKRYKVVRISRILDDSVTMIEIFAFGTSSE 182
           +TNE+  P IS A  DR+ YY Y  GFSP+TK+YK+VR     D +  ++E F FGT+ +
Sbjct: 144 MTNEYFKPPISNASKDRW-YYCYRFGFSPKTKQYKLVRFFYSCDKAAILLETFTFGTNCK 203

Query: 183 WTRVTSVRRGVYFRKYA-YFNGELYFLG-SYRNGDCVIFCLDVEEERIRKIPTPQVKEKF 242
            T V+ V   +   +++ YFNG LY++G   ++   V++ LD+E+E +++I  PQ     
Sbjct: 204 STYVSCVPSSMSMEEHSVYFNGSLYWIGKQLKHPTNVLYRLDIEKEELQEISFPQ-SGGC 263

Query: 243 CRIGNVGGTLYLSTSHD--PPFHVWKMIEDSSWIKVFDCSVP------------NLKLIQ 302
           C IG   G+LYL+ +      +HVWKM ED SW K FD  +P             L+LI+
Sbjct: 264 CSIGVFNGSLYLTLAQGRYHAYHVWKMEEDFSWTKAFDVLLPKIYVHHRRLYDSQLQLIR 323

Query: 303 ICEDGKILFVVNRLYFAFYDPTSALIEVLGDLDIQSMEMFGVHQIGSFNNFSSIHKILAG 330
            C+DGKIL +++ L    Y+  +  +E    L  Q + +  VH+I SF NF S+HKIL G
Sbjct: 324 ACDDGKILCLISGLDLILYNSKTQRME---SLTYQHLNIKKVHRIDSF-NFDSLHKILTG 376

[Close]

BLAST of Sed0019166 vs. ExPASy TrEMBL
Match: A0A5D3CIX9 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003440 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 4.1e-54
Identity = 139/366 (37.98%), Postives = 202/366 (55.19%), Query Frame = 0


Query: 1   MEVIFSKLPFYTLPSCRIVCKEWNDLILTPKFDPQISISNRLFA--YINPRGNLDCLDFD 60
           ++ IFSK+PF+ LP+CR+V + WN+LI + KFDP  SI +  FA  Y +   NL C++FD
Sbjct: 20  LQQIFSKIPFFNLPTCRLVSRTWNNLISSCKFDPSTSIYHLFFARFYSSRHRNLHCVEFD 79

Query: 61  SKH-----LVKRSNFHKLF-PENRIVTVLSSCHELLFLLIKKY----SNHYCACILNPLT 120
            +H     +V    FH  F   +  +T+++SC  L+ LLI K           C+LNP+T
Sbjct: 80  PQHVEGMSIVASFAFHPDFCSASSRITIINSCSGLISLLITKRRRRGQRRDVVCVLNPIT 139

Query: 121 NE-FVMPRIS-KADRFNYYFYGLGFSPRTKRYKVVRISRILDDSVTMIEIFAFGTSSEWT 180
           NE F  P +  K D+   Y YGLGFSP+T +YK+ R     ++ +  ++IFAFGTS EWT
Sbjct: 140 NEYFKHPNLRLKGDKVPNYCYGLGFSPKTNQYKLARTHFAHNEFI--VDIFAFGTSCEWT 199

Query: 181 RVTSVRRGVYFRKYAYFNGELYFLGSYR---NGDC-----VIFCLDVEEERIRKIPTPQV 240
            + SV   +      YFNG LY++GS +   NG       V++ LD+ +E+ +KI  P  
Sbjct: 200 PIGSVPNFLNEYHGVYFNGGLYWVGSQKQLPNGGLSDYTGVVYRLDLNDEKFKKISIPFG 259

Query: 241 KEKFCRIGNVGGTLYLS-TSHDPPFHVWKMIEDSSWIKVFDCSVPN-------------- 300
            ++   +G   GTLYL+    D  +HVWKM ED SW K F  ++P               
Sbjct: 260 GDE-PYVGVYNGTLYLTLCCEDFDYHVWKMKEDFSWSKEFVLALPENILHSLHRHHPIGY 319

Query: 301 -LKLIQICEDGKILFVVNRLYFAFYDPTSALIEVLGDLDIQSMEMFGVHQIGSFNNFSSI 329
            L+L++ CEDG IL +   +    YDP +  +E+L D D +  E    HQI SF +F+S+
Sbjct: 320 YLQLVKFCEDGSILCLCAGILLIVYDPKTQQMEILTDQDFEIKEGMWFHQIESF-SFNSL 379

[Close]

BLAST of Sed0019166 vs. ExPASy TrEMBL
Match: A0A1S3BQV8 (putative F-box protein At3g21120 OS=Cucumis melo OX=3656 GN=LOC103492215 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 4.1e-54
Identity = 139/366 (37.98%), Postives = 202/366 (55.19%), Query Frame = 0


Query: 1   MEVIFSKLPFYTLPSCRIVCKEWNDLILTPKFDPQISISNRLFA--YINPRGNLDCLDFD 60
           ++ IFSK+PF+ LP+CR+V + WN+LI + KFDP  SI +  FA  Y +   NL C++FD
Sbjct: 20  LQQIFSKIPFFNLPTCRLVSRTWNNLISSCKFDPSTSIYHLFFARFYSSRHRNLHCVEFD 79

Query: 61  SKH-----LVKRSNFHKLF-PENRIVTVLSSCHELLFLLIKKY----SNHYCACILNPLT 120
            +H     +V    FH  F   +  +T+++SC  L+ LLI K           C+LNP+T
Sbjct: 80  PQHVEGMSIVASFAFHPDFCSASSRITIINSCSGLISLLITKRRRRGQRRDVVCVLNPIT 139

Query: 121 NE-FVMPRIS-KADRFNYYFYGLGFSPRTKRYKVVRISRILDDSVTMIEIFAFGTSSEWT 180
           NE F  P +  K D+   Y YGLGFSP+T +YK+ R     ++ +  ++IFAFGTS EWT
Sbjct: 140 NEYFKHPNLRLKGDKVPNYCYGLGFSPKTNQYKLARTHFAHNEFI--VDIFAFGTSCEWT 199

Query: 181 RVTSVRRGVYFRKYAYFNGELYFLGSYR---NGDC-----VIFCLDVEEERIRKIPTPQV 240
            + SV   +      YFNG LY++GS +   NG       V++ LD+ +E+ +KI  P  
Sbjct: 200 PIGSVPNFLNEYHGVYFNGGLYWVGSQKQLPNGGLSDYTGVVYRLDLNDEKFKKISIPFG 259

Query: 241 KEKFCRIGNVGGTLYLS-TSHDPPFHVWKMIEDSSWIKVFDCSVPN-------------- 300
            ++   +G   GTLYL+    D  +HVWKM ED SW K F  ++P               
Sbjct: 260 GDE-PYVGVYNGTLYLTLCCEDFDYHVWKMKEDFSWSKEFVLALPENILHSLHRHHPIGY 319

Query: 301 -LKLIQICEDGKILFVVNRLYFAFYDPTSALIEVLGDLDIQSMEMFGVHQIGSFNNFSSI 329
            L+L++ CEDG IL +   +    YDP +  +E+L D D +  E    HQI SF +F+S+
Sbjct: 320 YLQLVKFCEDGSILCLCAGILLIVYDPKTQQMEILTDQDFEIKEGMWFHQIESF-SFNSL 379

[Close]

BLAST of Sed0019166 vs. ExPASy TrEMBL
Match: A0A5D3CM94 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006720 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 9.0e-54
Identity = 139/363 (38.29%), Postives = 196/363 (53.99%), Query Frame = 0


Query: 1   MEVIFSKLPFYTLPSCRIVCKEWNDLILTPKFDPQISISNRLFAYINPRGNLDCLDFD-- 60
           ++VI SK+P + L SCR+VCK WN+L+LT KFDP + IS    AY  P   L C+DFD  
Sbjct: 23  IQVILSKVPLFNLTSCRLVCKSWNNLVLTCKFDPSLFIS---LAYDCPSRTLYCVDFDPM 82

Query: 61  ---SKHLVKRSNFH-KLFPENRIVTVLSSCHELLFLLIKKY---SNHYCACILNPLTNEF 120
                + V   +FH K    +  ++++++C+ LL LLI K    S  Y   ILNP+TNE+
Sbjct: 83  YSEGMNSVGSFSFHPKFSTSSSSISIINACNGLLSLLISKRKPGSVSYVLGILNPMTNEY 142

Query: 121 VMPRISKADRF----NYYFYGLGFSPRTKRYKVVRISRILDDSVTMIEIFAFGTSSE-WT 180
                 K+         Y YGLGF+P+ K+YK+ R S   D+S T++EIFAFG++ + WT
Sbjct: 143 FKFPAEKSKSHCCCGRLYSYGLGFNPKKKQYKIARTSFRPDESTTLVEIFAFGSTYQVWT 202

Query: 181 RVTSVRRGVYFRKYAYFNGELYFLGS----YRNGDCVIFCLDVEEERIRKIPTPQVKEKF 240
            V  +   V      YFNG LY++ +    + +    I+ LD+E E + KI  PQ     
Sbjct: 203 SVGFLPSLVVEDHGVYFNGGLYWVANQPDPHDSSISTIYRLDIENENLEKISCPQHLGGH 262

Query: 241 CRIGNVGGTLYLSTSHDPPFHVWKMIEDSSWIKVFDCSVP----------------NLKL 300
              G   GTLYL+ S +  + VWKM ++ SWIK F  S P                 L  
Sbjct: 263 FFFGVFDGTLYLTVSKNNKYQVWKMKDNFSWIKAFVISSPRNLCHPDHPHQPWGVSQLDP 322

Query: 301 IQICEDGKILFVVNRLYFAFYDPTSALIEVLGDLDIQSMEMFGVHQIGSFNNFSSIHKIL 330
           I+ CEDGKIL ++  L+   YDP +   E+L D  ++  +   VH I SF NF+S+  IL
Sbjct: 323 IKACEDGKILCLLAGLHLILYDPKTKSAEILTDQSVKVEKHLHVHHIDSF-NFNSLPNIL 381

[Close]

BLAST of Sed0019166 vs. TAIR 10
Match: AT1G11620.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 52.4 bits (124), Expect = 8.2e-07
Identity = 72/301 (23.92%), Postives = 119/301 (39.53%), Query Frame = 0


Query: 1   MEVIFSKLPFYTLPSCRIVCKEWNDLILTPKFDPQISISNRLFAYINPRGNLDCLDFDSK 60
           +E I S++P  +L   R  CK+W  LI  P+F       N+  +++  R     + F+++
Sbjct: 11  VEEILSRVPARSLVRLRSTCKQWEALIAEPRF------VNKHLSHMRYREQQFTV-FNNE 70

Query: 61  HLVK----------RSNFHKLFPENRIVTV-----------LSSCHELLFLLIKKYSNHY 120
           H+V             +F+K  PEN  V +           +S C  LL  + K      
Sbjct: 71  HIVSPLFGSTTSYVGIDFNK--PENCGVKLPFPIALSPAINISHCDGLLLYVTKS----- 130

Query: 121 CACILNPLTNEFVMPRISKADRFNYYFYGLGF----SPRTKRYKVVRISRILDDSVTMIE 180
              + NPL ++    + S+    +   YGLG+    S     YKVVR    + +S + +E
Sbjct: 131 MLLVANPLLSQKRWIKCSEGFDHSMDAYGLGYLFNQSSGFYDYKVVRFRCGIKNS-SRVE 190

Query: 181 IFAFGTSSEWTRVTSVRRGVYF---RKYAYFNGELYFLGSYRNGD--CVIFCLDVEEERI 240
           ++AF  S  W  V     G +           G  Y+LG  ++G+    I   D  +ER 
Sbjct: 191 VYAF-KSDSWKVVVDTNFGGFDGLPLSSVCLRGTPYWLGYNKSGNELMSIQSFDFSKERF 250

Query: 241 RKIPTPQVK------EKFCRIGNVGG---TLYLSTSHDPPFHVWKMIEDSSWIKVFDCSV 263
             +  P          K+  +G   G   +L L        H+W M +   W ++    V
Sbjct: 251 EPLFLPPQSIGSRNLVKYISLGIFRGDQLSLLLECHETCKLHLWVM-KKQHWSRLMTVDV 294

[Close]

BLAST of Sed0019166 vs. TAIR 10
Match: AT5G42460.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 47.0 bits (110), Expect = 3.4e-05
Identity = 57/252 (22.62%), Postives = 99/252 (39.29%), Query Frame = 0


Query: 4   IFSKLPFYTLPSCRIVCKEWNDL-----------ILTPK------------------FDP 63
           I S++P  +L + R+ CK+WNDL           + T K                  +  
Sbjct: 15  ILSRVPLTSLRAVRLTCKKWNDLSKDRSFLKKQIVETKKKQLESKEIEVIMMRNFRVYLT 74

Query: 64  QISISNRLFAYINPRGNLDCLDFDSKHLVKRSNFHKLFPENRIVTVLSSCHELLFLLIKK 123
            I I N +     P+G L  L  D+ H       H++   +R+      C  LL  + K 
Sbjct: 75  SIDIHNNVDPSFTPKGTLISLSDDANH-------HQVDNVSRVF----HCDGLLLCITKD 134

Query: 124 YSNHYCACILNPLTNE--FVMPRISKADRFNYYFYGLGFSPRTKRYKVVRIS---RILDD 183
              HY   + NP   +  ++ PR S   + N   Y LG+  + K +K++R+        +
Sbjct: 135 L--HYRLVVWNPYFGQTRWIQPRNSYHRKDN---YALGYDEK-KNHKILRLKDNYYAPRE 194

Query: 184 SVTMIEIFAFGTSSEWTRVTSVRRGVYFRKY---AYFNGELYFLGSYRNGDC-VIFCLDV 217
            +   E+++F  S+ W  V  V    Y   Y       G  Y+  + ++ +   + C D 
Sbjct: 195 RICEFELYSF-ESNSWKVVLDVSPDWYIPSYNRGLSLKGNTYWYATEKHVNVDFLICFDF 248

[Close]

BLAST of Sed0019166 vs. TAIR 10
Match: AT2G27520.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 46.6 bits (109), Expect = 4.5e-05
Identity = 58/224 (25.89%), Postives = 88/224 (39.29%), Query Frame = 0


Query: 1   MEVIFSKLPFYTLPSCRIVCKEWNDLILTPKFDPQISISNRLFAYINPRGNLD-CLDFDS 60
           ++ I S+LP  +L   R  CK WN L   P+F         +    +     D  L   +
Sbjct: 11  VDEILSRLPATSLGRLRFTCKRWNALFKDPEF---------ITKQFHKAAKQDLVLMLSN 70

Query: 61  KHLVKRSNFHKLFPENRIVTVLSSCHELLFLLIKKYSNHYCACILNPLTNE--FVMPRIS 120
             +   S   K  P N  +  +  C+ LL L   +  N     ++NP T +  ++ PR  
Sbjct: 71  FGVYSMSTNLKEIPNNIEIAQVFHCNGLL-LCSTEEGNKTKLVVVNPCTGQTRWIEPRTD 130

Query: 121 KADRFNY---YFYGLGFSPRTKRYKVVRISRILDDSVTMIEIFAFGTSSEWTRVTSVRRG 180
               +NY      G G +   K Y   +I RI      ++EIF    S+ W  ++ V   
Sbjct: 131 ----YNYNHDIALGYGNNSTKKSYDSYKILRI-TYGCKLVEIFEL-KSNSWRVLSKVHPN 190

Query: 181 VYFRKY--AYFNGELYFLGSYRNGDCVIFCLDVEEERIRKIPTP 217
           V    Y    F G  Y+L SY   + + F  D   E  R +P P
Sbjct: 191 VEKHYYGGVSFKGNTYWL-SYTKFNILSF--DFTTETFRSVPLP 215

[Close]

BLAST of Sed0019166 vs. TAIR 10
Match: AT2G43260.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 44.3 bits (103), Expect = 2.2e-04
Identity = 71/306 (23.20%), Postives = 113/306 (36.93%), Query Frame = 0


Query: 1   MEVIFSKLPFYTLPSCRIVCKEWNDLILTPKF-DPQISISNR----LFAYINPRGNLDCL 60
           +E +  +LP  ++  CRIV K+W  L+ + +F +  +S+ N     L AY     N DC 
Sbjct: 18  LEEVLLRLPTKSILKCRIVSKQWRSLLESSRFAERHMSLQNSRRRILAAY-----NCDC- 77

Query: 61  DFDSKHLVKRSNFHKLFPENRIVTVLSSCHELLFLL------------IKKYSNHYCACI 120
                         KL PE+R         E+++L             +  +       +
Sbjct: 78  ----------GGRRKLLPESR----FEGDEEIVYLHCDASRPSMTCQGVICFPEQDWIIV 137

Query: 121 LNPLTNEFVMPRISKADRFNYYF--------------YGLGFSPRTKRYKVVRISRIL-- 180
           LNP T++  + R       N  F               G G      RYKVVR+S     
Sbjct: 138 LNPSTSQ--LRRFPSGLNHNCRFRIGLWKTFSPGNWVMGFGRDKVNGRYKVVRMSFAFWR 197

Query: 181 ---DDSVTMIEIFAFGTSSEWTRVTSVRRGVYF-RKYAYFNGELYFL---GSYRNGDCVI 240
              ++ V    +    T  EW +++     V    K    NG +Y+L     YR     I
Sbjct: 198 VRQEEPVVECGVLDVDT-GEWRKLSPPPYVVNVGSKSVCVNGSIYWLHIQTVYR-----I 257

Query: 241 FCLDVEEERIRKIPTPQVKEKF-CRIGNVGGTLYLSTSHDPP---FHVWKM-IEDSSWIK 262
             LD+ +E   K+P P  +     ++ N+   L L+ +   P     VW M      W K
Sbjct: 258 LALDLHKEEFHKVPVPPTQITVDTQMVNLEDRLVLAITRVSPEWILEVWGMDTYKEKWSK 295

The following BLAST results are available for this feature:

BLAST of Sed0019166 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883771.1	2.7e-60	40.61	putative F-box protein At1g60370 [Benincasa hispida]	[more]
XP_038880514.1	7.8e-60	41.64	putative F-box protein At1g46984 [Benincasa hispida]	[more]
XP_004135796.1	1.4e-56	40.38	putative F-box protein At1g46984 [Cucumis sativus] >KGN66126.1 hypothetical prot...	[more]
XP_022143297.1	7.6e-55	39.06	F-box/kelch-repeat protein At3g06240-like [Momordica charantia]	[more]
XP_008450717.1	8.4e-54	37.98	PREDICTED: putative F-box protein At3g21120 [Cucumis melo] >TYK10199.1 putative ...	[more]

BLAST of Sed0019166 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SAB5	1.2e-05	23.92	Putative F-box/LRR-repeat/kelch-repeat protein At1g11620 OS=Arabidopsis thaliana...	[more]
Q9FIH1	4.8e-04	22.62	F-box protein At5g42460 OS=Arabidopsis thaliana OX=3702 GN=At5g42460 PE=2 SV=2	[more]
Q9ZNQ3	6.3e-04	25.89	F-box/LRR-repeat/kelch-repeat protein At2g27520 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Sed0019166 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M1M5	6.7e-57	40.38	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G572960 PE=4 ...	[more]
A0A6J1CQE2	3.7e-55	39.06	F-box/kelch-repeat protein At3g06240-like OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A5D3CIX9	4.1e-54	37.98	Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1...	[more]
A0A1S3BQV8	4.1e-54	37.98	putative F-box protein At3g21120 OS=Cucumis melo OX=3656 GN=LOC103492215 PE=4 SV...	[more]
A0A5D3CM94	9.0e-54	38.29	Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2...	[more]

BLAST of Sed0019166 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G11620.1	8.2e-07	23.92	F-box and associated interaction domains-containing protein	[more]
AT5G42460.1	3.4e-05	22.62	F-box and associated interaction domains-containing protein	[more]
AT2G27520.1	4.5e-05	25.89	F-box and associated interaction domains-containing protein	[more]
AT2G43260.1	2.2e-04	23.20	F-box and associated interaction domains-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017451	F-box associated interaction domain	TIGRFAM	TIGR01640	TIGR01640	coord: 82..280 e-value: 7.7E-18 score: 62.6
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 2..37 e-value: 3.2E-7 score: 30.1
None	No IPR available	PANTHER	PTHR47993:SF20	F-BOX FAMILY PROTEIN	coord: 8..261
None	No IPR available	PANTHER	PTHR47993	OS09G0372900 PROTEIN-RELATED	coord: 8..261
IPR011043	Galactose oxidase/kelch, beta-propeller	SUPERFAMILY	50965	Galactose oxidase, central domain	coord: 101..289
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 3..47

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0019166.1	Sed0019166.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding